>gb|AF479051.1| Triticum aestivum early nodule-specific-like protein ENOD8 gene
           mRNA, partial cds
          Length = 501

 Score =  373 bits (188), Expect = e-100
 Identities = 262/286 (91%), Gaps = 1/286 (0%)
 Strand = Plus / Minus

                                                                       
Query: 357 acgtcatgctaggccgctagcttgctctttcgtctggagctcgtggg-acgaagcgccac 415
           |||||||| ||||| |||||||||| ||||||||| ||||| | ||| ||||||||||||
Sbjct: 491 acgtcatgntaggctgctagcttgccctttcgtctcgagcttgaggggacgaagcgccac 432

                                                                       
Query: 416 agatcgactgcgatgtcaagctccttctgtttgtggaacctgtaggtccgtggtagatcg 475
           ||||||||| |||| || |||||||| || |||||||||||||||||||| |||||||||
Sbjct: 431 agatcgactncgatatcgagctccttttgcttgtggaacctgtaggtccgaggtagatcg 372

                                                                       
Query: 476 tagcgaagctcacacagaacttcagcactgattgcgttgcagttacgcaaggctgacttc 535
           ||||| ||||||||||||||||| ||||||||||||||||| ||||||| ||||| ||||
Sbjct: 371 tagcgcagctcacacagaacttcggcactgattgcgttgcaattacgcagggctgccttc 312

                                                                       
Query: 536 ttgatgtattctctcgtggaagtcttgtgtagagaatacactgcttgagatgcaaccttc 595
           |||||||| ||||||||||| |||||||| |||||||| || ||||||| ||||||||||
Sbjct: 311 ttgatgtactctctcgtggaggtcttgtgcagagaatagacagcttgagctgcaaccttc 252

                                                         
Query: 596 aagcccatagaaaggaattccatgtcagctccttttctttttgtcc 641
           ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 aagcccatagaaaggaattccatgtcagctccttttctttttgtcc 206

>ref|XM_550346.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 976

 Score =  200 bits (101), Expect = 4e-48
 Identities = 212/249 (85%)
 Strand = Plus / Minus

                                                                       
Query: 385 ttcgtctggagctcgtgggacgaagcgccacagatcgactgcgatgtcaagctccttctg 444
           ||||||| | |||||||| ||||| ||||| | |||||| ||||| |||| ||| || ||
Sbjct: 705 ttcgtctcgggctcgtggcacgaaccgccaaaaatcgacggcgatatcaacctcgttttg 646

                                                                       
Query: 445 tttgtggaacctgtaggtccgtggtagatcgtagcgaagctcacacagaacttcagcact 504
           |||||| ||| |||| ||||||||||| | |||||| |||||||| ||||| || |||||
Sbjct: 645 tttgtgaaacttgtatgtccgtggtaggttgtagcggagctcacatagaacctcggcact 586

                                                                       
Query: 505 gattgcgttgcagttacgcaaggctgacttcttgatgtattctctcgtggaagtcttgtg 564
            || || |||||||| |||||||||  ||||||||||| |||||| || |||||||||||
Sbjct: 585 tatggcattgcagttgcgcaaggctaccttcttgatgtgttctctggtagaagtcttgtg 526

                                                                       
Query: 565 tagagaatacactgcttgagatgcaaccttcaagcccatagaaaggaattccatgtcagc 624
           ||| ||||| || ||| |||  |||||||||| ||||||||||| |||||||||||||||
Sbjct: 525 tagcgaatagacagctcgagtggcaaccttcatgcccatagaaatgaattccatgtcagc 466

                    
Query: 625 tccttttct 633
           |||||||||
Sbjct: 465 tccttttct 457

>dbj|AK066755.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013075C21, full
           insert sequence
          Length = 976

 Score =  200 bits (101), Expect = 4e-48
 Identities = 212/249 (85%)
 Strand = Plus / Minus

                                                                       
Query: 385 ttcgtctggagctcgtgggacgaagcgccacagatcgactgcgatgtcaagctccttctg 444
           ||||||| | |||||||| ||||| ||||| | |||||| ||||| |||| ||| || ||
Sbjct: 704 ttcgtctcgggctcgtggcacgaaccgccaaaaatcgacggcgatatcaacctcgttttg 645

                                                                       
Query: 445 tttgtggaacctgtaggtccgtggtagatcgtagcgaagctcacacagaacttcagcact 504
           |||||| ||| |||| ||||||||||| | |||||| |||||||| ||||| || |||||
Sbjct: 644 tttgtgaaacttgtatgtccgtggtaggttgtagcggagctcacatagaacctcggcact 585

                                                                       
Query: 505 gattgcgttgcagttacgcaaggctgacttcttgatgtattctctcgtggaagtcttgtg 564
            || || |||||||| |||||||||  ||||||||||| |||||| || |||||||||||
Sbjct: 584 tatggcattgcagttgcgcaaggctaccttcttgatgtgttctctggtagaagtcttgtg 525

                                                                       
Query: 565 tagagaatacactgcttgagatgcaaccttcaagcccatagaaaggaattccatgtcagc 624
           ||| ||||| || ||| |||  |||||||||| ||||||||||| |||||||||||||||
Sbjct: 524 tagcgaatagacagctcgagtggcaaccttcatgcccatagaaatgaattccatgtcagc 465

                    
Query: 625 tccttttct 633
           |||||||||
Sbjct: 464 tccttttct 456

>gb|AY106391.1| Zea mays PCO123453 mRNA sequence
          Length = 1005

 Score =  168 bits (85), Expect = 1e-38
 Identities = 187/221 (84%)
 Strand = Plus / Minus

                                                                       
Query: 407 aagcgccacagatcgactgcgatgtcaagctccttctgtttgtggaacctgtaggtccgt 466
           |||||||||||||||||||| ||||||| ||| || |  ||||| ||| |||| ||||| 
Sbjct: 776 aagcgccacagatcgactgcaatgtcaatctcttttttcttgtgcaacttgtacgtccgc 717

                                                                       
Query: 467 ggtagatcgtagcgaagctcacacagaacttcagcactgattgcgttgcagttacgcaag 526
           ||||||| ||| || ||||| || ||||| || |||||||| || ||| ||  |||||||
Sbjct: 716 ggtagattgtaacgcagctcgcatagaacctccgcactgatggcattgaagccacgcaag 657

                                                                       
Query: 527 gctgacttcttgatgtattctctcgtggaagtcttgtgtagagaatacactgcttgagat 586
           |||| ||||||||| | |||||| ||||||||||||||||||||||| || |||||||| 
Sbjct: 656 gctgccttcttgatatgttctctagtggaagtcttgtgtagagaatagacagcttgagaa 597

                                                    
Query: 587 gcaaccttcaagcccatagaaaggaattccatgtcagctcc 627
           ||||||| |||| ||||||| ||||| |||||||| |||||
Sbjct: 596 gcaacctgcaaggccatagagaggaactccatgtctgctcc 556

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 42/44 (95%)
 Strand = Plus / Plus

                                                           
Query: 590     accttcaagcccatagaaaggaattccatgtcagctccttttct 633
               ||||||| ||||||||||| ||||||||||||||||||||||||
Sbjct: 3154517 accttcatgcccatagaaatgaattccatgtcagctccttttct 3154560



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 84/101 (83%)
 Strand = Plus / Plus

                                                                           
Query: 385     ttcgtctggagctcgtgggacgaagcgccacagatcgactgcgatgtcaagctccttctg 444
               ||||||| | |||||||| ||||| ||||| | |||||| ||||| |||| ||| || ||
Sbjct: 3153537 ttcgtctcgggctcgtggcacgaaccgccaaaaatcgacggcgatatcaacctcgttttg 3153596

                                                        
Query: 445     tttgtggaacctgtaggtccgtggtagatcgtagcgaagct 485
               |||||| ||| |||| ||||||||||| | |||||| ||||
Sbjct: 3153597 tttgtgaaacttgtatgtccgtggtaggttgtagcggagct 3153637



 Score = 46.1 bits (23), Expect = 0.14
 Identities = 50/59 (84%)
 Strand = Plus / Plus

                                                                          
Query: 484     ctcacacagaacttcagcactgattgcgttgcagttacgcaaggctgacttcttgatgt 542
               |||||| ||||| || ||||| || || |||||||| |||||||||  |||||||||||
Sbjct: 3154108 ctcacatagaacctcggcacttatggcattgcagttgcgcaaggctaccttcttgatgt 3154166

>dbj|AB026295.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6,
              clone:P0681F10
          Length = 170371

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 42/44 (95%)
 Strand = Plus / Plus

                                                          
Query: 590    accttcaagcccatagaaaggaattccatgtcagctccttttct 633
              ||||||| ||||||||||| ||||||||||||||||||||||||
Sbjct: 108702 accttcatgcccatagaaatgaattccatgtcagctccttttct 108745



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 84/101 (83%)
 Strand = Plus / Plus

                                                                          
Query: 385    ttcgtctggagctcgtgggacgaagcgccacagatcgactgcgatgtcaagctccttctg 444
              ||||||| | |||||||| ||||| ||||| | |||||| ||||| |||| ||| || ||
Sbjct: 107722 ttcgtctcgggctcgtggcacgaaccgccaaaaatcgacggcgatatcaacctcgttttg 107781

                                                       
Query: 445    tttgtggaacctgtaggtccgtggtagatcgtagcgaagct 485
              |||||| ||| |||| ||||||||||| | |||||| ||||
Sbjct: 107782 tttgtgaaacttgtatgtccgtggtaggttgtagcggagct 107822



 Score = 46.1 bits (23), Expect = 0.14
 Identities = 50/59 (84%)
 Strand = Plus / Plus

                                                                         
Query: 484    ctcacacagaacttcagcactgattgcgttgcagttacgcaaggctgacttcttgatgt 542
              |||||| ||||| || ||||| || || |||||||| |||||||||  |||||||||||
Sbjct: 108293 ctcacatagaacctcggcacttatggcattgcagttgcgcaaggctaccttcttgatgt 108351

>ref|XM_872927.1| PREDICTED: Bos taurus similar to Signal transducer and activator of
           transcription 1-alpha/beta (Transcription factor ISGF-3
           components p91/p84), transcript variant 11 (LOC510814),
           mRNA
          Length = 5070

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 429 tgtcaagctccttctgtttgt 449
           |||||||||||||||||||||
Sbjct: 707 tgtcaagctccttctgtttgt 687

>ref|XM_872826.1| PREDICTED: Bos taurus similar to Signal transducer and activator of
           transcription 1-alpha/beta (Transcription factor ISGF-3
           components p91/p84), transcript variant 10 (LOC510814),
           mRNA
          Length = 5079

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 429 tgtcaagctccttctgtttgt 449
           |||||||||||||||||||||
Sbjct: 707 tgtcaagctccttctgtttgt 687

>ref|XM_872736.1| PREDICTED: Bos taurus similar to Signal transducer and activator of
           transcription 1-alpha/beta (Transcription factor ISGF-3
           components p91/p84), transcript variant 9 (LOC510814),
           mRNA
          Length = 4917

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 429 tgtcaagctccttctgtttgt 449
           |||||||||||||||||||||
Sbjct: 707 tgtcaagctccttctgtttgt 687

>ref|XM_872625.1| PREDICTED: Bos taurus similar to Signal transducer and activator of
           transcription 1-alpha/beta (Transcription factor ISGF-3
           components p91/p84), transcript variant 8 (LOC510814),
           mRNA
          Length = 5238

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 429 tgtcaagctccttctgtttgt 449
           |||||||||||||||||||||
Sbjct: 701 tgtcaagctccttctgtttgt 681

>ref|XM_872526.1| PREDICTED: Bos taurus similar to Signal transducer and activator of
           transcription 1-alpha/beta (Transcription factor ISGF-3
           components p91/p84), transcript variant 7 (LOC510814),
           mRNA
          Length = 5040

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 429 tgtcaagctccttctgtttgt 449
           |||||||||||||||||||||
Sbjct: 707 tgtcaagctccttctgtttgt 687

>ref|XM_588019.2| PREDICTED: Bos taurus similar to Signal transducer and activator of
           transcription 1-alpha/beta (Transcription factor ISGF-3
           components p91/p84), transcript variant 1 (LOC510814),
           mRNA
          Length = 2708

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 429 tgtcaagctccttctgtttgt 449
           |||||||||||||||||||||
Sbjct: 707 tgtcaagctccttctgtttgt 687

>ref|XM_872328.1| PREDICTED: Bos taurus similar to Signal transducer and activator of
           transcription 1-alpha/beta (Transcription factor ISGF-3
           components p91/p84), transcript variant 6 (LOC510814),
           mRNA
          Length = 5061

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 429 tgtcaagctccttctgtttgt 449
           |||||||||||||||||||||
Sbjct: 707 tgtcaagctccttctgtttgt 687

>ref|XM_872114.1| PREDICTED: Bos taurus similar to Signal transducer and activator of
           transcription 1-alpha/beta (Transcription factor ISGF-3
           components p91/p84), transcript variant 4 (LOC510814),
           mRNA
          Length = 5147

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 429 tgtcaagctccttctgtttgt 449
           |||||||||||||||||||||
Sbjct: 707 tgtcaagctccttctgtttgt 687

>ref|XM_864032.1| PREDICTED: Bos taurus similar to Signal transducer and activator of
           transcription 1-alpha/beta (Transcription factor ISGF-3
           components p91/p84), transcript variant 3 (LOC510814),
           mRNA
          Length = 5073

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 429 tgtcaagctccttctgtttgt 449
           |||||||||||||||||||||
Sbjct: 707 tgtcaagctccttctgtttgt 687

>gb|AC108517.3| Homo sapiens BAC clone RP11-622J8 from 4, complete sequence
          Length = 128233

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 570   aatacactgcttgagatgcaa 590
             |||||||||||||||||||||
Sbjct: 45996 aatacactgcttgagatgcaa 45976

>gb|AE005674.1| Shigella flexneri 2a str. 301, complete genome
          Length = 4607203

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 439     cttctgtttgtggaacctgtaggt 462
               ||||||||||||||||||| ||||
Sbjct: 4090172 cttctgtttgtggaacctgaaggt 4090149

>gb|AY323788.1| Hyla cinerea SIH-06 Rag-2 gene, partial cds
          Length = 816

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 276 tcttctcctggcaagtccagccat 299
           ||||||||||| ||||||||||||
Sbjct: 585 tcttctcctgggaagtccagccat 608

>gb|AC012560.5| Homo sapiens chromosome 10 clone RP11-397I15, complete sequence
          Length = 170917

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 434   agctccttctgtttgtggaacctg 457
             ||||||||||||||||||| ||||
Sbjct: 79973 agctccttctgtttgtggagcctg 79996

>emb|BX323586.10| Zebrafish DNA sequence from clone CH211-3O3 in linkage group 9, complete
              sequence
          Length = 171172

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 611    aattccatgtcagctccttt 630
              ||||||||||||||||||||
Sbjct: 123083 aattccatgtcagctccttt 123102

>gb|AY172024.1| Crassostrea ariakensis heat shock protein 70 mRNA, complete cds
          Length = 2320

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 431  tcaagctccttctgtttgtg 450
            ||||||||||||||||||||
Sbjct: 1897 tcaagctccttctgtttgtg 1878

>gb|AC011061.13| Homo sapiens chromosome 17, clone RP11-12H18, complete sequence
          Length = 165643

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 142    gagagaacgccagccaaccc 161
              ||||||||||||||||||||
Sbjct: 153540 gagagaacgccagccaaccc 153559

>gb|AC025518.8| Homo sapiens chromosome 17, clone RP11-713H12, complete sequence
          Length = 176355

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 142   gagagaacgccagccaaccc 161
             ||||||||||||||||||||
Sbjct: 25564 gagagaacgccagccaaccc 25583

>gb|AC012084.9| Homo sapiens 10 BAC RP11-943E22 (Roswell Park Cancer Institute Human
            BAC Library) complete sequence
          Length = 167441

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 434  agctccttctgtttgtggaacctg 457
            ||||||||||||||||||| ||||
Sbjct: 8495 agctccttctgtttgtggagcctg 8472

>gb|AY064167.1| Lactobacillus helveticus N-deoxyribosyltransferase (ntd) gene,
           complete cds
          Length = 1286

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 266 gccgacgtcttcttctcctggcaa 289
           |||||||||||||||| |||||||
Sbjct: 493 gccgacgtcttcttcttctggcaa 470

>gb|AC083813.29| Homo sapiens 12q BAC RP11-304C10 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 216123

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 20     tgggcgcagaggcgatctgt 39
              ||||||||||||||||||||
Sbjct: 139091 tgggcgcagaggcgatctgt 139072

>gb|AC016748.3| Homo sapiens BAC clone RP11-494M7 from 2, complete sequence
          Length = 182776

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 20    tgggcgcagaggcgatctgt 39
             ||||||||||||||||||||
Sbjct: 60821 tgggcgcagaggcgatctgt 60802

>gb|AE014073.1| Shigella flexneri 2a str. 2457T, complete genome
          Length = 4599354

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 439     cttctgtttgtggaacctgtaggt 462
               ||||||||||||||||||| ||||
Sbjct: 3683047 cttctgtttgtggaacctgaaggt 3683070

>gb|U51038.1|HSU51038 Human nonmuscle myosin II heavy chain-B gene, partial cds
          Length = 3603

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 142 gagagaacgccagccaaccc 161
           ||||||||||||||||||||
Sbjct: 858 gagagaacgccagccaaccc 877

>emb|AL732296.11| Mouse DNA sequence from clone RP23-131P6 on chromosome 2, complete
             sequence
          Length = 203503

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 93    atccagcatgacaaaaacaa 112
             ||||||||||||||||||||
Sbjct: 45736 atccagcatgacaaaaacaa 45717


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,270,980
Number of Sequences: 3902068
Number of extensions: 5270980
Number of successful extensions: 95525
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 95376
Number of HSP's gapped (non-prelim): 148
length of query: 641
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 618
effective length of database: 17,143,297,704
effective search space: 10594557981072
effective search space used: 10594557981072
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)