>dbj|AK115607.1| Ciona intestinalis cDNA, clone:cilv007c23, full insert sequence
          Length = 678

 Score =  236 bits (119), Expect = 1e-59
 Identities = 138/142 (97%), Gaps = 2/142 (1%)
 Strand = Plus / Minus

                                                                       
Query: 1   tttggagggagataaaa-gccttaaaatatn-cgaaactttattatacatacggatttta 58
           ||||||||||||||||| || |||||||||  ||||||||||||||||||||||||||||
Sbjct: 630 tttggagggagataaaaagcattaaaatatcacgaaactttattatacatacggatttta 571

                                                                       
Query: 59  tattaaggagtaggagtacaaaagaggttgcatcggtttaattatcaatgtggaggaaga 118
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 570 tattaaggagtaggagtacaaaagaggttgcatcggtttaattatcaatgtggaggaaga 511

                                 
Query: 119 tggggcacattttcattccatt 140
           ||||||||||||||||||||||
Sbjct: 510 tggggcacattttcattccatt 489

>gb|AC067719.12| Homo sapiens 3 BAC RP11-183L23 (Roswell Park Cancer Institute Human
            BAC Library) complete sequence
          Length = 172945

 Score = 44.1 bits (22), Expect = 0.11
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 46   catacggattttatattaaggagtag 71
            |||||||||||||||| |||||||||
Sbjct: 9799 catacggattttatataaaggagtag 9824

>dbj|AK116123.1| Ciona intestinalis cDNA, clone:citb011a14, full insert sequence
          Length = 1605

 Score = 42.1 bits (21), Expect = 0.43
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                             
Query: 108  gtggaggaagatggggcacattttcattccatt 140
            |||||| |||||||| ||| |||||||||||||
Sbjct: 1150 gtggagtaagatgggacaccttttcattccatt 1182

>dbj|AK115842.1| Ciona intestinalis cDNA, clone:cilv030f13, full insert sequence
          Length = 1363

 Score = 42.1 bits (21), Expect = 0.43
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                             
Query: 108  gtggaggaagatggggcacattttcattccatt 140
            |||| |||||||||| ||| |||||||||||||
Sbjct: 1060 gtgggggaagatgggacacgttttcattccatt 1028

>gb|AY667406.1| Ciona intestinalis isolate France 3 snail gene, partial cds
          Length = 4530

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 113  ggaagatggggcacattttcattc 136
            |||||||||| |||||||||||||
Sbjct: 1833 ggaagatgggacacattttcattc 1810

>emb|Z83861.1|CICOS46 Ciona intestinalis DNA sequence from cosmid COS46
          Length = 39403

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 113  ggaagatggggcacattttcattc 136
            |||||||||| |||||||||||||
Sbjct: 6782 ggaagatgggacacattttcattc 6805

>gb|AC007981.47| Homo sapiens chromosome 22 clone b291 map 22q11, complete sequence
          Length = 175358

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 9     gagataaaagccttaaaata 28
             ||||||||||||||||||||
Sbjct: 90291 gagataaaagccttaaaata 90272

>gb|AC012330.10| Homo sapiens clone b2262a2, complete sequence
          Length = 105288

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 9     gagataaaagccttaaaata 28
             ||||||||||||||||||||
Sbjct: 61166 gagataaaagccttaaaata 61185

>dbj|AK174900.1| Ciona intestinalis cDNA, clone:citb037c18, full insert sequence
          Length = 1065

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 113 ggaagatggggcacattttcattccatt 140
           |||||||||| ||| |||||||||||||
Sbjct: 500 ggaagatgggacactttttcattccatt 527

>dbj|AK116847.1| Ciona intestinalis cDNA, clone:cilv011n02, full insert sequence
          Length = 3014

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 113  ggaagatggggcacattttcattc 136
            |||||||||| |||||||||||||
Sbjct: 2922 ggaagatgggacacattttcattc 2899

>gb|AC116387.7| Mus musculus chromosome 18, clone RP23-37P9, complete sequence
          Length = 217116

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 4      ggagggagataaaagcctt 22
              |||||||||||||||||||
Sbjct: 136045 ggagggagataaaagcctt 136063

>gb|AC036222.23| Homo sapiens chromosome 17, clone RP11-433M22, complete sequence
          Length = 174965

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 35    actttattatacatacgga 53
             |||||||||||||||||||
Sbjct: 41454 actttattatacatacgga 41436

>gb|AC113974.9| Mus musculus chromosome 18, clone RP23-140D3, complete sequence
          Length = 270111

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 4     ggagggagataaaagcctt 22
             |||||||||||||||||||
Sbjct: 27630 ggagggagataaaagcctt 27612

>emb|AL590113.8| Human DNA sequence from clone RP11-234D19 on chromosome 1 Contains a
             novel gene (gm117), the BCL10 gene for B-cell CLL/lymphoma
             10 and the 5' end of a novel gene, complete sequence
          Length = 97789

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 98    aattatcaatgtggaggaagatg 120
             ||||||| |||||||||||||||
Sbjct: 36381 aattatctatgtggaggaagatg 36403

>emb|AL354982.12| Human DNA sequence from clone RP11-473H13 on chromosome 9 Contains part
             of the gene for the likely ortholog of mouse polydom
             (POLYDOM), complete sequence
          Length = 119077

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 74    gtacaaaagaggttgcatc 92
             |||||||||||||||||||
Sbjct: 92987 gtacaaaagaggttgcatc 93005

>gb|AC158564.7| Mus musculus chromosome 8, clone RP24-373M3, complete sequence
          Length = 144461

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 104   caatgtggaggaagatggg 122
             |||||||||||||||||||
Sbjct: 36134 caatgtggaggaagatggg 36116

>gb|AC010049.7| Drosophila melanogaster 3L BAC RPCI98-3O18 (Roswell Park Cancer
             Institute Drosophila BAC library) complete sequence
          Length = 168058

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 105   aatgtggaggaagatgggg 123
             |||||||||||||||||||
Sbjct: 86274 aatgtggaggaagatgggg 86256

>gb|AC011611.26| Homo sapiens 12 BAC RP11-290L1 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 179085

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 10    agataaaagccttaaaata 28
             |||||||||||||||||||
Sbjct: 95773 agataaaagccttaaaata 95755

>emb|BX769173.6| Zebrafish DNA sequence from clone DKEY-62J22 in linkage group 3, complete
              sequence
          Length = 194589

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 63     aaggagtaggagtacaaaa 81
              |||||||||||||||||||
Sbjct: 105564 aaggagtaggagtacaaaa 105582

>dbj|AK222349.1| Ciona intestinalis cDNA, clone:cieg007b18, full insert sequence
          Length = 4042

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                       
Query: 108  gtggaggaagatggggcacattttcat 134
            |||| |||||||||||||| |||||||
Sbjct: 2541 gtgggggaagatggggcaccttttcat 2567

>gb|AC099553.1| Drosophila melanogaster 3L BAC RP98-25G5 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 177608

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 105    aatgtggaggaagatgggg 123
              |||||||||||||||||||
Sbjct: 155180 aatgtggaggaagatgggg 155162

>ref|XM_696357.1| PREDICTED: Danio rerio hypothetical protein LOC554664 (LOC554664),
            mRNA
          Length = 2116

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 105  aatgtggaggaagatgggg 123
            |||||||||||||||||||
Sbjct: 982  aatgtggaggaagatgggg 1000

>gb|AE003594.3| Drosophila melanogaster chromosome 3L, section 75 of 83 of the complete
              sequence
          Length = 314904

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 105    aatgtggaggaagatgggg 123
              |||||||||||||||||||
Sbjct: 182876 aatgtggaggaagatgggg 182858

>dbj|AK113543.1| Ciona intestinalis cDNA, clone:ciad069g12, full insert sequence
          Length = 1740

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                       
Query: 114  gaagatggggcacattttcattccatt 140
            ||||||||| ||| |||||||||||||
Sbjct: 1373 gaagatgggacaccttttcattccatt 1399

>emb|AL935265.4| Zebrafish DNA sequence from clone DKEY-66M24, complete sequence
          Length = 197137

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 63     aaggagtaggagtacaaaa 81
              |||||||||||||||||||
Sbjct: 178400 aaggagtaggagtacaaaa 178382


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,601,591
Number of Sequences: 3902068
Number of extensions: 1601591
Number of successful extensions: 109925
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 109877
Number of HSP's gapped (non-prelim): 47
length of query: 140
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 119
effective length of database: 17,151,101,840
effective search space: 2040981118960
effective search space used: 2040981118960
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)