ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd2n23
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_465422.1| Oryza sativa (japonica cultivar-group), mRNA 176 4e-41
2dbj|AK111848.1| Oryza sativa (japonica cultivar-group) cDNA clon... 176 4e-41
3gb|AY111186.1| Zea mays CL41009_1 mRNA sequence 139 9e-30
4dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 74 4e-10
5dbj|AP004816.3| Oryza sativa (japonica cultivar-group) genomic D... 74 4e-10
6ref|XM_471317.1| Oryza sativa (japonica cultivar-group), predic... 64 4e-07
7dbj|AK119369.1| Oryza sativa (japonica cultivar-group) cDNA clon... 64 4e-07
8emb|AL606991.3|OSJN00113 Oryza sativa genomic DNA, chromosome 4,... 54 4e-04
9dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 54 4e-04
10ref|NM_101108.2| Arabidopsis thaliana KEU (KEULE); protein trans... 44 0.39
11emb|BX815736.1|CNS0ABJB Arabidopsis thaliana Full-length cDNA Co... 44 0.39
12gb|AF331066.1|AF331066 Arabidopsis thaliana KEULE mRNA, complete... 44 0.39
13gb|AY626066.2| Bombyx mori transformer-2 protein (TRA-2) gene, c... 44 0.39
14gb|AC160945.5| Mus musculus 10 BAC RP24-187J13 (Roswell Park Can... 42 1.5
15gb|AC153825.7| Mus musculus 10 BAC RP23-70B19 (Roswell Park Canc... 42 1.5
16emb|AL669940.14| Mouse DNA sequence from clone RP23-214P11 on ch... 42 1.5
17gb|BC040857.1| Homo sapiens serpin peptidase inhibitor, clade A ... 40 6.0
18gb|AC116568.5| Mus musculus BAC clone RP23-34C4 from chromosome ... 40 6.0
19ref|XM_718694.1| Plasmodium yoelii yoelii str. 17XNL hypothetica... 40 6.0
20gb|AC140915.6| Medicago truncatula clone mth2-10l24, complete se... 40 6.0
21emb|AL590083.8| Human DNA sequence from clone RP11-475D8 on chro... 40 6.0
22emb|AL035686.15|HS965N20 Human DNA sequence from clone RP5-965N2... 40 6.0
23gb|AC023602.5| Homo sapiens 3 BAC RP11-16N5 (Roswell Park Cancer... 40 6.0
24gb|AY326420.1| Homo sapiens visceral adipose-specific SERPIN mRN... 40 6.0
25gb|AC154393.8| Mus musculus chromosome 1, clone RP23-64O1, compl... 40 6.0
26gb|AC080038.5| Homo sapiens chromosome 17, clone CTD-3035K23, co... 40 6.0
27gb|AC150032.3| Rhinolophus ferrumequinum clone VMRC7-372J13, com... 40 6.0
28ref|NM_173850.2| Homo sapiens serpin peptidase inhibitor, clade ... 40 6.0
29gb|AC153774.3| Loxodonta africana clone VMRC15-554J14, complete ... 40 6.0
30gb|DP000028.1| Rhinolophus ferrumequinum target 1 genomic scaffold 40 6.0
31gb|AC092915.7| Homo sapiens 3 BAC RP11-585F20 (Roswell Park Canc... 40 6.0
32gb|AY177692.1| Homo sapiens OL-64 mRNA, complete cds 40 6.0
33gb|AC149602.1| Mus musculus BAC clone RP24-116G21 from chromosom... 40 6.0
34emb|BX571732.6| Zebrafish DNA sequence from clone DKEY-49H7 in l... 40 6.0
35emb|BX294375.7| Zebrafish DNA sequence from clone DKEY-176M20 in... 40 6.0
36emb|AL928716.15| Zebrafish DNA sequence from clone DKEY-23K6 in ... 40 6.0
37emb|AJ294720.1|ZRO294720 Zygosaccharomyces rouxii partial SSRP1-... 40 6.0
38emb|AL132990.4|CNS01DTY Human chromosome 14 DNA sequence BAC R-2... 40 6.0
39emb|AL132708.3|CNS01DTA Human chromosome 14 DNA sequence BAC R-3... 40 6.0
40gb|AC005821.1|AC005821 Homo sapiens chromosome 17, clone hRPK.15... 40 6.0
41gb|AC101944.16| Mus musculus chromosome 1, clone RP24-118B6, com... 40 6.0 
>ref|XM_465422.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2750

 Score =  176 bits (89), Expect = 4e-41
 Identities = 203/244 (83%)
 Strand = Plus / Minus

                                                                        
Query: 206  tgaagatcgtccagtgtcagctcttcggctgacatcatcttcagttttgtgatgaactnn 265
            |||||||| ||||| ||||| || ||| ||||||||||||||||||| ||||||||||  
Sbjct: 2426 tgaagatcatccagcgtcagttcatcgactgacatcatcttcagtttcgtgatgaactgg 2367

                                                                        
Query: 266  nnnnnatcatcaaggctggacgaaccaaggatgacctcacgcttcagcttcgatgtaagc 325
                 |||||| || || || |||||||| ||||| || ||||| ||||| |||||||||
Sbjct: 2366 ggaggatcatccagactagatgaaccaagtatgacttcccgctttagcttggatgtaagc 2307

                                                                        
Query: 326  ttgtgcgcancgcgtaactctgatcgantagcaccaccaatgacaaaaacaaatatacgc 385
            |||||| || | |||||||| || ||| | || |||||||||||||| ||||||||||||
Sbjct: 2306 ttgtgcacagcacgtaactccgaccgagtggcgccaccaatgacaaacacaaatatacgc 2247

                                                                        
Query: 386  tggccatgcttttggaaatcactcgatgcatgcttcaatacagaatcacttgaataacca 445
            || ||| |||||| ||| |||||||| | ||||||||  || |||||||||||||| |||
Sbjct: 2246 tgaccaagctttttgaagtcactcgacgaatgcttcagcactgaatcacttgaataccca 2187

                
Query: 446  tcat 449
            ||||
Sbjct: 2186 tcat 2183
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>dbj|AK111848.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023148D21, full
            insert sequence
          Length = 2751

 Score =  176 bits (89), Expect = 4e-41
 Identities = 203/244 (83%)
 Strand = Plus / Minus

                                                                        
Query: 206  tgaagatcgtccagtgtcagctcttcggctgacatcatcttcagttttgtgatgaactnn 265
            |||||||| ||||| ||||| || ||| ||||||||||||||||||| ||||||||||  
Sbjct: 2427 tgaagatcatccagcgtcagttcatcgactgacatcatcttcagtttcgtgatgaactgg 2368

                                                                        
Query: 266  nnnnnatcatcaaggctggacgaaccaaggatgacctcacgcttcagcttcgatgtaagc 325
                 |||||| || || || |||||||| ||||| || ||||| ||||| |||||||||
Sbjct: 2367 ggaggatcatccagactagatgaaccaagtatgacttcccgctttagcttggatgtaagc 2308

                                                                        
Query: 326  ttgtgcgcancgcgtaactctgatcgantagcaccaccaatgacaaaaacaaatatacgc 385
            |||||| || | |||||||| || ||| | || |||||||||||||| ||||||||||||
Sbjct: 2307 ttgtgcacagcacgtaactccgaccgagtggcgccaccaatgacaaacacaaatatacgc 2248

                                                                        
Query: 386  tggccatgcttttggaaatcactcgatgcatgcttcaatacagaatcacttgaataacca 445
            || ||| |||||| ||| |||||||| | ||||||||  || |||||||||||||| |||
Sbjct: 2247 tgaccaagctttttgaagtcactcgacgaatgcttcagcactgaatcacttgaataccca 2188

                
Query: 446  tcat 449
            ||||
Sbjct: 2187 tcat 2184
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>gb|AY111186.1| Zea mays CL41009_1 mRNA sequence
          Length = 727

 Score =  139 bits (70), Expect = 9e-30
 Identities = 176/216 (81%)
 Strand = Plus / Plus

                                                                       
Query: 234 ctgacatcatcttcagttttgtgatgaactnnnnnnnatcatcaaggctggacgaaccaa 293
           ||||||||| ||| | ||||||||||||||       |||||||||||| || |||||||
Sbjct: 225 ctgacatcaactttaattttgtgatgaactggggaggatcatcaaggctagatgaaccaa 284

                                                                       
Query: 294 ggatgacctcacgcttcagcttcgatgtaagcttgtgcgcancgcgtaactctgatcgan 353
           ||||||  || ||||||||||| |||| ||||||||| ||| | ||||||||||||||| 
Sbjct: 285 ggatgatgtctcgcttcagcttggatgaaagcttgtgtgcagcacgtaactctgatcgag 344

                                                                       
Query: 354 tagcaccaccaatgacaaaaacaaatatacgctggccatgcttttggaaatcactcgatg 413
           ||||||| || || ||     ||||||||||||| ||| | ||   ||| ||||| || |
Sbjct: 345 tagcaccgcctattacnnnnncaaatatacgctgaccaagtttcctgaagtcactggagg 404

                                               
Query: 414 catgcttcaatacagaatcacttgaataaccatcat 449
           |||||||||| ||||||||||||||||| |||||||
Sbjct: 405 catgcttcaacacagaatcacttgaatatccatcat 440
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 67/77 (87%)
 Strand = Plus / Plus

                                                                            
Query: 359      ccaccaatgacaaaaacaaatatacgctggccatgcttttggaaatcactcgatgcatgc 418
                |||||||||||||| |||||||||||||| ||| |||||| ||| |||||||| | ||||
Sbjct: 15043127 ccaccaatgacaaacacaaatatacgctgaccaagctttttgaagtcactcgacgaatgc 15043186

                                 
Query: 419      ttcaatacagaatcact 435
                ||||  || ||||||||
Sbjct: 15043187 ttcagcactgaatcact 15043203



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 50/58 (86%)
 Strand = Plus / Plus

                                                                          
Query: 287      gaaccaaggatgacctcacgcttcagcttcgatgtaagcttgtgcgcancgcgtaact 344
                |||||||| ||||| || ||||| ||||| ||||||||||||||| || | |||||||
Sbjct: 15042891 gaaccaagtatgacttcccgctttagcttggatgtaagcttgtgcacagcacgtaact 15042948



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 42/47 (89%)
 Strand = Plus / Plus

                                                               
Query: 206      tgaagatcgtccagtgtcagctcttcggctgacatcatcttcagttt 252
                |||||||| ||||| ||||| || ||| |||||||||||||||||||
Sbjct: 15042731 tgaagatcatccagcgtcagttcatcgactgacatcatcttcagttt 15042777
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>dbj|AP004816.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0533E11
          Length = 150678

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 67/77 (87%)
 Strand = Plus / Plus

                                                                         
Query: 359   ccaccaatgacaaaaacaaatatacgctggccatgcttttggaaatcactcgatgcatgc 418
             |||||||||||||| |||||||||||||| ||| |||||| ||| |||||||| | ||||
Sbjct: 48908 ccaccaatgacaaacacaaatatacgctgaccaagctttttgaagtcactcgacgaatgc 48967

                              
Query: 419   ttcaatacagaatcact 435
             ||||  || ||||||||
Sbjct: 48968 ttcagcactgaatcact 48984



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 50/58 (86%)
 Strand = Plus / Plus

                                                                       
Query: 287   gaaccaaggatgacctcacgcttcagcttcgatgtaagcttgtgcgcancgcgtaact 344
             |||||||| ||||| || ||||| ||||| ||||||||||||||| || | |||||||
Sbjct: 48672 gaaccaagtatgacttcccgctttagcttggatgtaagcttgtgcacagcacgtaact 48729



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 42/47 (89%)
 Strand = Plus / Plus

                                                            
Query: 206   tgaagatcgtccagtgtcagctcttcggctgacatcatcttcagttt 252
             |||||||| ||||| ||||| || ||| |||||||||||||||||||
Sbjct: 48512 tgaagatcatccagcgtcagttcatcgactgacatcatcttcagttt 48558
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>ref|XM_471317.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1998

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 51/58 (87%)
 Strand = Plus / Minus

                                                                      
Query: 323  agcttgtgcgcancgcgtaactctgatcgantagcaccaccaatgacaaaaacaaata 380
            |||||||| ||| | | |||||| |||||| ||||||||||||| |||||||||||||
Sbjct: 1874 agcttgtgagcagcacataactcagatcgagtagcaccaccaataacaaaaacaaata 1817
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>dbj|AK119369.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-131-H07, full
            insert sequence
          Length = 3904

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 51/58 (87%)
 Strand = Plus / Minus

                                                                      
Query: 323  agcttgtgcgcancgcgtaactctgatcgantagcaccaccaatgacaaaaacaaata 380
            |||||||| ||| | | |||||| |||||| ||||||||||||| |||||||||||||
Sbjct: 2802 agcttgtgagcagcacataactcagatcgagtagcaccaccaataacaaaaacaaata 2745
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>emb|AL606991.3|OSJN00113 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0032B23,
             complete sequence
          Length = 120640

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                               
Query: 347   gatcgantagcaccaccaatgacaaaaacaaata 380
             |||||| ||||||||||||| |||||||||||||
Sbjct: 87646 gatcgagtagcaccaccaataacaaaaacaaata 87679
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
               sequence
          Length = 35498469

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                                 
Query: 347     gatcgantagcaccaccaatgacaaaaacaaata 380
               |||||| ||||||||||||| |||||||||||||
Sbjct: 9992696 gatcgagtagcaccaccaataacaaaaacaaata 9992729
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>ref|NM_101108.2| Arabidopsis thaliana KEU (KEULE); protein transporter AT1G12360 (KEU)
            mRNA, complete cds
          Length = 2540

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                          
Query: 420  tcaatacagaatcacttgaataaccatcat 449
            ||||||| |||||||||||||| |||||||
Sbjct: 2073 tcaataccgaatcacttgaatatccatcat 2044
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>emb|BX815736.1|CNS0ABJB Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS8ZB09 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 882

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 420 tcaatacagaatcacttgaataaccatcat 449
           ||||||| |||||||||||||| |||||||
Sbjct: 507 tcaataccgaatcacttgaatatccatcat 478
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>gb|AF331066.1|AF331066 Arabidopsis thaliana KEULE mRNA, complete cds
          Length = 2001

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                          
Query: 420  tcaatacagaatcacttgaataaccatcat 449
            ||||||| |||||||||||||| |||||||
Sbjct: 1777 tcaataccgaatcacttgaatatccatcat 1748
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>gb|AY626066.2| Bombyx mori transformer-2 protein (TRA-2) gene, complete cds,
            alternatively spliced
          Length = 10450

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 128  gatcacaaagaaaataccaaaataaa 153
            |||||||||||||| |||||||||||
Sbjct: 3183 gatcacaaagaaaagaccaaaataaa 3158
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>gb|AC160945.5| Mus musculus 10 BAC RP24-187J13 (Roswell Park Cancer Institute
             (C57BL/6J Male) Mouse BAC Library) complete sequence
          Length = 168109

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 358   accaccaatgacaaaaacaaa 378
             |||||||||||||||||||||
Sbjct: 11321 accaccaatgacaaaaacaaa 11341
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>gb|AC153825.7| Mus musculus 10 BAC RP23-70B19 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 279677

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 358   accaccaatgacaaaaacaaa 378
             |||||||||||||||||||||
Sbjct: 65830 accaccaatgacaaaaacaaa 65810
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>emb|AL669940.14| Mouse DNA sequence from clone RP23-214P11 on chromosome 4, complete
             sequence
          Length = 129987

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 91    tgtggttttgatgcaactagt 111
             |||||||||||||||||||||
Sbjct: 94859 tgtggttttgatgcaactagt 94839
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>gb|BC040857.1| Homo sapiens serpin peptidase inhibitor, clade A (alpha-1
            antiproteinase, antitrypsin), member 12, mRNA (cDNA clone
            MGC:50359 IMAGE:5527002), complete cds
          Length = 2087

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 146  aaaataaaggagaattcctg 165
            ||||||||||||||||||||
Sbjct: 2035 aaaataaaggagaattcctg 2054
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>gb|AC116568.5| Mus musculus BAC clone RP23-34C4 from chromosome 8, complete sequence
          Length = 218715

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 134   aaagaaaataccaaaataaa 153
             ||||||||||||||||||||
Sbjct: 57909 aaagaaaataccaaaataaa 57890
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>ref|XM_718694.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY03606)
           partial mRNA
          Length = 1203

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 137 gaaaataccaaaataaagga 156
           ||||||||||||||||||||
Sbjct: 100 gaaaataccaaaataaagga 119
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>gb|AC140915.6| Medicago truncatula clone mth2-10l24, complete sequence
          Length = 120364

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 241   catcttcagttttgtgatga 260
             ||||||||||||||||||||
Sbjct: 35716 catcttcagttttgtgatga 35697
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>emb|AL590083.8| Human DNA sequence from clone RP11-475D8 on chromosome X Contains a
             novel gene, the GPR23 gene for G protein-coupled receptor
             23 and a 60S ribosomal protein L7 (RPL7) pseudogene,
             complete sequence
          Length = 127780

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 138   aaaataccaaaataaaggagaatt 161
             |||||||||||| |||||||||||
Sbjct: 27641 aaaataccaaaacaaaggagaatt 27618
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>emb|AL035686.15|HS965N20 Human DNA sequence from clone RP5-965N20 on chromosome 20q13.13-13.2
             Contains ESTs, STSs and GSSs, complete sequence
          Length = 127197

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 136   agaaaataccaaaataaaggagaa 159
             ||||||||||||||||| ||||||
Sbjct: 75471 agaaaataccaaaataagggagaa 75494
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>gb|AC023602.5| Homo sapiens 3 BAC RP11-16N5 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 96959

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 387   ggccatgcttttggaaatca 406
             ||||||||||||||||||||
Sbjct: 83104 ggccatgcttttggaaatca 83085
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>gb|AY326420.1| Homo sapiens visceral adipose-specific SERPIN mRNA, complete cds
          Length = 1497

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 146  aaaataaaggagaattcctg 165
            ||||||||||||||||||||
Sbjct: 1462 aaaataaaggagaattcctg 1481
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>gb|AC154393.8| Mus musculus chromosome 1, clone RP23-64O1, complete sequence
          Length = 253733

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 134  aaagaaaataccaaaataaa 153
            ||||||||||||||||||||
Sbjct: 7112 aaagaaaataccaaaataaa 7093
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>gb|AC080038.5| Homo sapiens chromosome 17, clone CTD-3035K23, complete sequence
          Length = 219122

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 134   aaagaaaataccaaaataaa 153
             ||||||||||||||||||||
Sbjct: 73846 aaagaaaataccaaaataaa 73827
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>gb|AC150032.3| Rhinolophus ferrumequinum clone VMRC7-372J13, complete sequence
          Length = 168878

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 132    acaaagaaaataccaaaata 151
              ||||||||||||||||||||
Sbjct: 127657 acaaagaaaataccaaaata 127638
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>ref|NM_173850.2| Homo sapiens serpin peptidase inhibitor, clade A (alpha-1
            antiproteinase, antitrypsin), member 12 (SERPINA12), mRNA
          Length = 2087

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 146  aaaataaaggagaattcctg 165
            ||||||||||||||||||||
Sbjct: 2035 aaaataaaggagaattcctg 2054
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>gb|AC153774.3| Loxodonta africana clone VMRC15-554J14, complete sequence
          Length = 136822

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 132   acaaagaaaataccaaaata 151
             ||||||||||||||||||||
Sbjct: 83086 acaaagaaaataccaaaata 83067
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>gb|DP000028.1| Rhinolophus ferrumequinum target 1 genomic scaffold
          Length = 1756392

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 132    acaaagaaaataccaaaata 151
              ||||||||||||||||||||
Sbjct: 127657 acaaagaaaataccaaaata 127638
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>gb|AC092915.7| Homo sapiens 3 BAC RP11-585F20 (Roswell Park Cancer Institute Human
            BAC Library) complete sequence
          Length = 187215

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 130  tcacaaagaaaataccaaaa 149
            ||||||||||||||||||||
Sbjct: 5819 tcacaaagaaaataccaaaa 5800
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>gb|AY177692.1| Homo sapiens OL-64 mRNA, complete cds
          Length = 1292

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 146  aaaataaaggagaattcctg 165
            ||||||||||||||||||||
Sbjct: 1257 aaaataaaggagaattcctg 1276
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>gb|AC149602.1| Mus musculus BAC clone RP24-116G21 from chromosome 8, complete sequence
          Length = 158424

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 134    aaagaaaataccaaaataaa 153
              ||||||||||||||||||||
Sbjct: 121459 aaagaaaataccaaaataaa 121440
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>emb|BX571732.6| Zebrafish DNA sequence from clone DKEY-49H7 in linkage group 20,
             complete sequence
          Length = 87077

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 242   atcttcagttttgtgatgaa 261
             ||||||||||||||||||||
Sbjct: 28371 atcttcagttttgtgatgaa 28352
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>emb|BX294375.7| Zebrafish DNA sequence from clone DKEY-176M20 in linkage group 17,
              complete sequence
          Length = 188455

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 363    caatgacaaaaacaaatata 382
              ||||||||||||||||||||
Sbjct: 121358 caatgacaaaaacaaatata 121339
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>emb|AL928716.15| Zebrafish DNA sequence from clone DKEY-23K6 in linkage group 20, complete
              sequence
          Length = 246647

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 242    atcttcagttttgtgatgaa 261
              ||||||||||||||||||||
Sbjct: 149529 atcttcagttttgtgatgaa 149510
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>emb|AJ294720.1|ZRO294720 Zygosaccharomyces rouxii partial SSRP1-like gene
          Length = 1729

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 235 tgacatcatcttcagttttg 254
           ||||||||||||||||||||
Sbjct: 773 tgacatcatcttcagttttg 754
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>emb|AL132990.4|CNS01DTY Human chromosome 14 DNA sequence BAC R-262P9 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 181004

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 146   aaaataaaggagaattcctg 165
             ||||||||||||||||||||
Sbjct: 76492 aaaataaaggagaattcctg 76473
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>emb|AL132708.3|CNS01DTA Human chromosome 14 DNA sequence BAC R-349I1 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 147505

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 146   aaaataaaggagaattcctg 165
             ||||||||||||||||||||
Sbjct: 29344 aaaataaaggagaattcctg 29363
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>gb|AC005821.1|AC005821 Homo sapiens chromosome 17, clone hRPK.156_L_14, complete sequence
          Length = 174428

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 134    aaagaaaataccaaaataaa 153
              ||||||||||||||||||||
Sbjct: 163361 aaagaaaataccaaaataaa 163342
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>gb|AC101944.16| Mus musculus chromosome 1, clone RP24-118B6, complete sequence
          Length = 174560

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 134    aaagaaaataccaaaataaa 153
              ||||||||||||||||||||
Sbjct: 141197 aaagaaaataccaaaataaa 141178


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,232,484
Number of Sequences: 3902068
Number of extensions: 5232484
Number of successful extensions: 110055
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 109909
Number of HSP's gapped (non-prelim): 142
length of query: 449
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 427
effective length of database: 17,147,199,772
effective search space: 7321854302644
effective search space used: 7321854302644
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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