ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd3c18
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK101295.1| Oryza sativa (japonica cultivar-group) cDNA clon... 289 6e-75
2dbj|AK072237.1| Oryza sativa (japonica cultivar-group) cDNA clon... 289 6e-75
3dbj|AK068584.1| Oryza sativa (japonica cultivar-group) cDNA clon... 289 6e-75
4dbj|AK099037.1| Oryza sativa (japonica cultivar-group) cDNA clon... 274 3e-70
5gb|AY110496.1| Zea mays CL30719_1 mRNA sequence 165 2e-37
6dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 125 2e-25
7gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 125 2e-25
8emb|AL713946.3|CNS07YPP Oryza sativa chromosome 12, . BAC OJ1005... 125 2e-25
9emb|AL732645.4|CNS08C9K Oryza sativa chromosome 12, . BAC OSJNBb... 44 0.56
10ref|XM_470114.1| Oryza sativa (japonica cultivar-group), mRNA 42 2.2
11gb|AC150690.7| Bos taurus BAC CH240-151A24 (Children's Hospital... 42 2.2
12gb|AC147916.2| Xenopus tropicalis clone CH216-89A23, complete se... 42 2.2
13gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 42 2.2
14gb|AC122023.3| Mus musculus BAC clone RP24-372O13 from 12, compl... 42 2.2
15emb|AL365318.33| Human DNA sequence from clone RP11-159M11 on ch... 42 2.2
16gb|AC080043.5| Homo sapiens chromosome , clone RP11-45M9, comple... 42 2.2
17gb|AC090103.4| Homo sapiens chromosome 8, clone RP11-299D14, com... 42 2.2
18gb|AC023566.11| Homo sapiens chromosome 8, clone RP11-660D5, com... 42 2.2
19dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.2
20gb|AC154340.3| Mus musculus BAC clone RP23-238B22 from chromosom... 42 2.2
21gb|AC133007.4| Oryza sativa chromosome 3 BAC OSJNBa0094J08 genom... 42 2.2
22gb|AC109642.4| Homo sapiens BAC clone RP11-776F5 from 2, complet... 42 2.2
23emb|BX530725.11| Mouse DNA sequence from clone RP23-49E16 on chr... 42 2.2
24dbj|AK103889.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.2
25dbj|AK073864.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.2
26gb|AY108323.1| Zea mays PCO119733 mRNA sequence 42 2.2
27dbj|AK113288.1| Ciona intestinalis cDNA, clone:ciad028m11, full ... 42 2.2
28emb|AL954178.8| Mouse DNA sequence from clone RP23-21J10 on chro... 42 2.2
29gb|AY510333.1| Rattus norvegicus vomeronasal V1r-type receptor V... 40 8.8
30gb|AC118642.11| Mus musculus chromosome 18, clone RP24-112L21, c... 40 8.8
31gb|AC134409.12| Mus musculus chromosome 5, clone RP24-355F10, co... 40 8.8
32gb|AC149267.1| Solanum demissum chromosome 5 clone PGEC747E24 ma... 40 8.8
33gb|AC167123.2| Mus musculus chromosome 7, clone wi1-2141C15, com... 40 8.8
34gb|DQ179630.1| Fundulus sciadicus isolate S. Platte R. 2 cytochr... 40 8.8
35gb|AC166072.2| Mus musculus BAC clone RP23-226J22 from chromosom... 40 8.8
36gb|AC073900.6| Homo sapiens BAC clone RP11-172J11 from 7, comple... 40 8.8
37gb|AC124408.4| Mus musculus BAC clone RP24-262E22 from chromosom... 40 8.8
38gb|AY843891.1| Hyla pardalis cytochrome b (cytb) gene, partial c... 40 8.8
39ref|NM_001008923.1| Rattus norvegicus vomeronasal 1 receptor, d6... 40 8.8
40gb|AY748295.1| Aphyosemion etsamense isolate ETS925c cytochrome ... 40 8.8
41gb|AC165165.3| Mus musculus BAC clone RP23-121B15 from chromosom... 40 8.8
42emb|Z86090.10|HS229A8 Human DNA sequence from clone CTA-229A8 on... 40 8.8
43emb|AL160404.7| Human DNA sequence from clone RP1-318G22 on chro... 40 8.8
44gb|AF299273.1| Aphanius fasciatus cytochrome b (cyt b) gene, com... 40 8.8
45gb|CP000083.1| Colwellia psychrerythraea 34H, complete genome 40 8.8
46gb|AC098655.2| Homo sapiens chromosome 1 clone RP11-293P10, comp... 40 8.8
47gb|AF378967.1| Lacerta pater haplotype 5 cytochrome b (cytb) gen... 40 8.8
48gb|AF378966.1| Lacerta pater haplotype 4 cytochrome b (cytb) gen... 40 8.8
49gb|AF378965.1| Lacerta pater haplotype 3 cytochrome b (cytb) gen... 40 8.8
50gb|AF378964.1| Lacerta pater haplotype 2 cytochrome b (cytb) gen... 40 8.8
51gb|AF378963.1| Lacerta pater haplotype 1 cytochrome b (cytb) gen... 40 8.8
52gb|AC099769.2| Homo sapiens chromosome 1 clone RP5-963M5, comple... 40 8.8
53emb|BX571839.8| Zebrafish DNA sequence from clone DKEY-259P7 in ... 40 8.8
54dbj|AP008231.1| Synechococcus elongatus PCC 6301 DNA, complete g... 40 8.8
55gb|AC144923.7| Mus musculus chromosome 7, clone RP23-366A16, com... 40 8.8
56gb|AF252379.1|AF252379 Eurycea wilderae cytochrome b gene, parti... 40 8.8
57gb|AY663748.1| Bathybates graueri isolate 2228 cytochrome b (cyt... 40 8.8
58gb|AY663746.1| Bathybates graueri isolate 1760 cytochrome b (cyt... 40 8.8
59gb|AC073062.7| Homo sapiens BAC clone RP11-132H1 from 2, complet... 40 8.8
60gb|AF186765.1|AF186765 Anolis bonairensis cytochrome b gene, par... 40 8.8
61gb|AF186764.1|AF186764 Anolis luciae cytochrome b gene, partial ... 40 8.8
62emb|X67680.1|SSPNIR Synechococcus sp. nir gene for nitrite reduc... 40 8.8
63gb|AC137947.12| Mus musculus chromosome 5, clone RP23-362I3, com... 40 8.8
64gb|AC005208.1|AC005208 Homo sapiens chromosome 17, clone hRPK.10... 40 8.8
65gb|U77121.1|FSU77121 Fundulus sciadicus cytochrome b (cytb) gene... 40 8.8
66gb|CP000100.1| Synechococcus elongatus PCC 7942, complete genome 40 8.8
67dbj|D16303.1|SYONIRB Synechococcus sp. nirA gene (partial cds), ... 40 8.8 
>dbj|AK101295.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033033H14, full
            insert sequence
          Length = 1590

 Score =  289 bits (146), Expect = 6e-75
 Identities = 383/462 (82%)
 Strand = Plus / Minus

                                                                        
Query: 181  gattcaggagggtgtgaaggacctttctcagaaactcccgcgtgtatattgtatttatct 240
            ||||||||| | |||||| |||||||||| ||| ||||| | || |||||||| ||||||
Sbjct: 1026 gattcaggaagatgtgaatgacctttctcggaacctcccacatggatattgtagttatct 967

                                                                        
Query: 241  ccatattgagtaggaaaggtagcttcaggactgcccagcttcatcccatgtgctccacct 300
            ||||||  |||||| |||||  ||||||| ||||||||||||||||||| ||   |||||
Sbjct: 966  ccatatgaagtagggaaggtcacttcagggctgcccagcttcatcccatatgtcgcacct 907

                                                                        
Query: 301  gtgccccatggtctgccatcaaaactagctaattcggcccgcatttgttgaatttcttgt 360
            | | |||||||||| || ||  || |||||||||| || |||||||||| ||||||||||
Sbjct: 906  ggggcccatggtctcccttcggaattagctaattctgctcgcatttgttcaatttcttgt 847

                                                                        
Query: 361  gccatcgaaatcatactcttctccattgctttcctttgttccaccaactcaaagttcccc 420
            ||||||||||||||| ||||||||||||||||| | ||||| ||||||| ||| || || 
Sbjct: 846  gccatcgaaatcatattcttctccattgctttcttctgttcaaccaactgaaaatttcct 787

                                                                        
Query: 421  ttctgctccaactcacatgtattccttgcatgagtaagttccagttgaaggccctcaatc 480
            |||||||| || ||||||| |  ||||||||||  ||||||| || ||||| | ||||||
Sbjct: 786  ttctgctctaattcacatgcagaccttgcatgaacaagttcctgtcgaagggcatcaatc 727

                                                                        
Query: 481  tctgctttcaaaataggtaactgttgtttatcagatctctccctactcagctcctgcatg 540
            ||||||||||| ||||| | ||| ||||||| ||||   |||||  | || || ||||||
Sbjct: 726  tctgctttcaacataggaatctgctgtttattagattgttccctggttagttcatgcatg 667

                                                                        
Query: 541  agtgatgcagcctttgcagagagttctttcctaacagcaaggagcttctctatttcacca 600
            |  ||||||| ||| |||||||| |||||||| ||  ||||| |||| || |||||||| 
Sbjct: 666  atagatgcagacttcgcagagagctctttcctgactacaaggtgcttatcaatttcaccc 607

                                                      
Query: 601  cgaagatgcataacctcatctctcaaaggctcatttgatcta 642
            ||||| |||| || ||||||||| |||| |||||||| ||||
Sbjct: 606  cgaagctgcacaatctcatctcttaaagactcatttgctcta 565
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>dbj|AK072237.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023002H11, full
            insert sequence
          Length = 1472

 Score =  289 bits (146), Expect = 6e-75
 Identities = 383/462 (82%)
 Strand = Plus / Minus

                                                                        
Query: 181  gattcaggagggtgtgaaggacctttctcagaaactcccgcgtgtatattgtatttatct 240
            ||||||||| | |||||| |||||||||| ||| ||||| | || |||||||| ||||||
Sbjct: 1113 gattcaggaagatgtgaatgacctttctcggaacctcccacatggatattgtagttatct 1054

                                                                        
Query: 241  ccatattgagtaggaaaggtagcttcaggactgcccagcttcatcccatgtgctccacct 300
            ||||||  |||||| |||||  ||||||| ||||||||||||||||||| ||   |||||
Sbjct: 1053 ccatatgaagtagggaaggtcacttcagggctgcccagcttcatcccatatgtcgcacct 994

                                                                        
Query: 301  gtgccccatggtctgccatcaaaactagctaattcggcccgcatttgttgaatttcttgt 360
            | | |||||||||| || ||  || |||||||||| || |||||||||| ||||||||||
Sbjct: 993  ggggcccatggtctcccttcggaattagctaattctgctcgcatttgttcaatttcttgt 934

                                                                        
Query: 361  gccatcgaaatcatactcttctccattgctttcctttgttccaccaactcaaagttcccc 420
            ||||||||||||||| ||||||||||||||||| | ||||| ||||||| ||| || || 
Sbjct: 933  gccatcgaaatcatattcttctccattgctttcttctgttcaaccaactgaaaatttcct 874

                                                                        
Query: 421  ttctgctccaactcacatgtattccttgcatgagtaagttccagttgaaggccctcaatc 480
            |||||||| || ||||||| |  ||||||||||  ||||||| || ||||| | ||||||
Sbjct: 873  ttctgctctaattcacatgcagaccttgcatgaacaagttcctgtcgaagggcatcaatc 814

                                                                        
Query: 481  tctgctttcaaaataggtaactgttgtttatcagatctctccctactcagctcctgcatg 540
            ||||||||||| ||||| | ||| ||||||| ||||   |||||  | || || ||||||
Sbjct: 813  tctgctttcaacataggaatctgctgtttattagattgttccctggttagttcatgcatg 754

                                                                        
Query: 541  agtgatgcagcctttgcagagagttctttcctaacagcaaggagcttctctatttcacca 600
            |  ||||||| ||| |||||||| |||||||| ||  ||||| |||| || |||||||| 
Sbjct: 753  atagatgcagacttcgcagagagctctttcctgactacaaggtgcttatcaatttcaccc 694

                                                      
Query: 601  cgaagatgcataacctcatctctcaaaggctcatttgatcta 642
            ||||| |||| || ||||||||| |||| |||||||| ||||
Sbjct: 693  cgaagctgcacaatctcatctcttaaagactcatttgctcta 652



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 41/45 (91%)
 Strand = Plus / Minus

                                                         
Query: 40   cacaaacaagtaggtagataagatattctaaaccatgtgatatga 84
            |||||| ||| ||||||||| |||| |||||||||||||||||||
Sbjct: 1253 cacaaaaaaggaggtagatacgataatctaaaccatgtgatatga 1209
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>dbj|AK068584.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013157P20, full
            insert sequence
          Length = 1664

 Score =  289 bits (146), Expect = 6e-75
 Identities = 383/462 (82%)
 Strand = Plus / Minus

                                                                        
Query: 181  gattcaggagggtgtgaaggacctttctcagaaactcccgcgtgtatattgtatttatct 240
            ||||||||| | |||||| |||||||||| ||| ||||| | || |||||||| ||||||
Sbjct: 1160 gattcaggaagatgtgaatgacctttctcggaacctcccacatggatattgtagttatct 1101

                                                                        
Query: 241  ccatattgagtaggaaaggtagcttcaggactgcccagcttcatcccatgtgctccacct 300
            ||||||  |||||| |||||  ||||||| ||||||||||||||||||| ||   |||||
Sbjct: 1100 ccatatgaagtagggaaggtcacttcagggctgcccagcttcatcccatatgtcgcacct 1041

                                                                        
Query: 301  gtgccccatggtctgccatcaaaactagctaattcggcccgcatttgttgaatttcttgt 360
            | | |||||||||| || ||  || |||||||||| || |||||||||| ||||||||||
Sbjct: 1040 ggggcccatggtctcccttcggaattagctaattctgctcgcatttgttcaatttcttgt 981

                                                                        
Query: 361  gccatcgaaatcatactcttctccattgctttcctttgttccaccaactcaaagttcccc 420
            ||||||||||||||| ||||||||||||||||| | ||||| ||||||| ||| || || 
Sbjct: 980  gccatcgaaatcatattcttctccattgctttcttctgttcaaccaactgaaaatttcct 921

                                                                        
Query: 421  ttctgctccaactcacatgtattccttgcatgagtaagttccagttgaaggccctcaatc 480
            |||||||| || ||||||| |  ||||||||||  ||||||| || ||||| | ||||||
Sbjct: 920  ttctgctctaattcacatgcagaccttgcatgaacaagttcctgtcgaagggcatcaatc 861

                                                                        
Query: 481  tctgctttcaaaataggtaactgttgtttatcagatctctccctactcagctcctgcatg 540
            ||||||||||| ||||| | ||| ||||||| ||||   |||||  | || || ||||||
Sbjct: 860  tctgctttcaacataggaatctgctgtttattagattgttccctggttagttcatgcatg 801

                                                                        
Query: 541  agtgatgcagcctttgcagagagttctttcctaacagcaaggagcttctctatttcacca 600
            |  ||||||| ||| |||||||| |||||||| ||  ||||| |||| || |||||||| 
Sbjct: 800  atagatgcagacttcgcagagagctctttcctgactacaaggtgcttatcaatttcaccc 741

                                                      
Query: 601  cgaagatgcataacctcatctctcaaaggctcatttgatcta 642
            ||||| |||| || ||||||||| |||| |||||||| ||||
Sbjct: 740  cgaagctgcacaatctcatctcttaaagactcatttgctcta 699



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 41/45 (91%)
 Strand = Plus / Minus

                                                         
Query: 40   cacaaacaagtaggtagataagatattctaaaccatgtgatatga 84
            |||||| ||| ||||||||| |||| |||||||||||||||||||
Sbjct: 1300 cacaaaaaaggaggtagatacgataatctaaaccatgtgatatga 1256
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>dbj|AK099037.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013132N07, full
            insert sequence
          Length = 4390

 Score =  274 bits (138), Expect = 3e-70
 Identities = 381/462 (82%)
 Strand = Plus / Minus

                                                                        
Query: 181  gattcaggagggtgtgaaggacctttctcagaaactcccgcgtgtatattgtatttatct 240
            ||||||||| | |||||| |||||||||| ||| ||||| | || |||||||| ||||||
Sbjct: 1114 gattcaggaagatgtgaatgacctttctcggaacctcccacatggatattgtagttatct 1055

                                                                        
Query: 241  ccatattgagtaggaaaggtagcttcaggactgcccagcttcatcccatgtgctccacct 300
            ||||||  |||||| |||||  ||||||| ||||||||||||||||||| ||   |||||
Sbjct: 1054 ccatatgaagtagggaaggtcacttcagggctgcccagcttcatcccatatgtcgcacct 995

                                                                        
Query: 301  gtgccccatggtctgccatcaaaactagctaattcggcccgcatttgttgaatttcttgt 360
            | | |||||||||| || ||  || |||||||||| || |||||||||  |||| |||||
Sbjct: 994  ggggcccatggtctcccttcggaattagctaattctgctcgcatttgtccaattacttgt 935

                                                                        
Query: 361  gccatcgaaatcatactcttctccattgctttcctttgttccaccaactcaaagttcccc 420
            ||||||||||||||| ||||||||||||||||| | ||||| ||||||| ||| || || 
Sbjct: 934  gccatcgaaatcatattcttctccattgctttcttctgttcaaccaactgaaaatttcct 875

                                                                        
Query: 421  ttctgctccaactcacatgtattccttgcatgagtaagttccagttgaaggccctcaatc 480
            |||||||| || ||||||| |  ||||||||||  ||||||| || ||||| | ||||||
Sbjct: 874  ttctgctctaattcacatgcagaccttgcatgaacaagttcctgtcgaagggcatcaatc 815

                                                                        
Query: 481  tctgctttcaaaataggtaactgttgtttatcagatctctccctactcagctcctgcatg 540
            ||||||||||| ||||| | ||| ||||||| ||||   |||||  | || || ||||||
Sbjct: 814  tctgctttcaacataggaatctgctgtttattagattgttccctggttagttcatgcatg 755

                                                                        
Query: 541  agtgatgcagcctttgcagagagttctttcctaacagcaaggagcttctctatttcacca 600
            |  ||||||| ||| |||||||| |||||||| ||  ||||| |||| || |||||||| 
Sbjct: 754  atagatgcagacttcgcagagagctctttcctgactacaaggtgcttatcaatttcaccc 695

                                                      
Query: 601  cgaagatgcataacctcatctctcaaaggctcatttgatcta 642
            ||||| |||| || ||||||||| |||| |||||||| ||||
Sbjct: 694  cgaagctgcacaatctcatctcttaaagactcatttgctcta 653



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 41/45 (91%)
 Strand = Plus / Minus

                                                         
Query: 40   cacaaacaagtaggtagataagatattctaaaccatgtgatatga 84
            |||||| ||| ||||||||| |||| |||||||||||||||||||
Sbjct: 1254 cacaaaaaaggaggtagatacgataatctaaaccatgtgatatga 1210
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>gb|AY110496.1| Zea mays CL30719_1 mRNA sequence
          Length = 1192

 Score =  165 bits (83), Expect = 2e-37
 Identities = 275/339 (81%)
 Strand = Plus / Minus

                                                                       
Query: 282 catcccatgtgctccacctgtgccccatggtctgccatcaaaactagctaattcggcccg 341
           |||||||| ||||||||||| ||||| ||||||  | |||||| ||||||||||| | ||
Sbjct: 851 catcccatatgctccacctgggccccttggtctaacttcaaaattagctaattcgcctcg 792

                                                                       
Query: 342 catttgttgaatttcttgtgccatcgaaatcatactcttctccattgctttcctttgttc 401
           ||| || |  || ||||||||||| |||| |||| ||||||||||||| |||||||||||
Sbjct: 791 catctgctcgatctcttgtgccatagaaagcatattcttctccattgccttcctttgttc 732

                                                                       
Query: 402 caccaactcaaagttccccttctgctccaactcacatgtattccttgcatgagtaagttc 461
           || ||| || || |||||||||||||| ||| | || | | ||||  | |||  ||||||
Sbjct: 731 cagcaattccaaattccccttctgctctaacccgcaagcagtcctcacgtgaacaagttc 672

                                                                       
Query: 462 cagttgaaggccctcaatctctgctttcaaaataggtaactgttgtttatcagatctctc 521
           | |||| || || ||||| |||| |||||  | ||||| ||| |||||| |||||  |||
Sbjct: 671 ctgttgcagaccatcaatttctgttttcagcacaggtagctgctgtttaacagattgctc 612

                                                                       
Query: 522 cctactcagctcctgcatgagtgatgcagcctttgcagagagttctttcctaacagcaag 581
           |||  ||||||| | || ||| |||||||||| |||||| |||||||||| | | | || 
Sbjct: 611 cctgttcagctcttccacgagagatgcagcctctgcagatagttctttccgagcggtaac 552

                                                  
Query: 582 gagcttctctatttcaccacgaagatgcataacctcatc 620
           |||||| || |||||||||||||||||| | ||||||||
Sbjct: 551 gagcttgtcaatttcaccacgaagatgcctgacctcatc 513
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score =  125 bits (63), Expect = 2e-25
 Identities = 117/135 (86%)
 Strand = Plus / Plus

                                                                           
Query: 305     cccatggtctgccatcaaaactagctaattcggcccgcatttgttgaatttcttgtgcca 364
               |||||||||| || ||  || |||||||||| || |||||||||| ||||||||||||||
Sbjct: 4756859 cccatggtctcccttcggaattagctaattctgctcgcatttgttcaatttcttgtgcca 4756918

                                                                           
Query: 365     tcgaaatcatactcttctccattgctttcctttgttccaccaactcaaagttccccttct 424
               ||||||||||| ||||||||||||||||| | ||||| ||||||| ||| || || ||||
Sbjct: 4756919 tcgaaatcatattcttctccattgctttcttctgttcaaccaactgaaaatttcctttct 4756978

                              
Query: 425     gctccaactcacatg 439
               |||| || |||||||
Sbjct: 4756979 gctctaattcacatg 4756993



 Score =  101 bits (51), Expect = 3e-18
 Identities = 162/199 (81%)
 Strand = Plus / Plus

                                                                           
Query: 444     ccttgcatgagtaagttccagttgaaggccctcaatctctgctttcaaaataggtaactg 503
               ||||||||||  ||||||| || ||||| | ||||||||||||||||| ||||| | |||
Sbjct: 4757087 ccttgcatgaacaagttcctgtcgaagggcatcaatctctgctttcaacataggaatctg 4757146

                                                                           
Query: 504     ttgtttatcagatctctccctactcagctcctgcatgagtgatgcagcctttgcagagag 563
                ||||||| ||||   |||||  | || || |||||||  ||||||| ||| ||||||||
Sbjct: 4757147 ctgtttattagattgttccctggttagttcatgcatgatagatgcagacttcgcagagag 4757206

                                                                           
Query: 564     ttctttcctaacagcaaggagcttctctatttcaccacgaagatgcataacctcatctct 623
                |||||||| ||  ||||| |||| || |||||||| ||||| |||| || |||||||||
Sbjct: 4757207 ctctttcctgactacaaggtgcttatcaatttcaccccgaagctgcacaatctcatctct 4757266

                                  
Query: 624     caaaggctcatttgatcta 642
                |||| |||||||| ||||
Sbjct: 4757267 taaagactcatttgctcta 4757285



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 57/64 (89%)
 Strand = Plus / Plus

                                                                           
Query: 226     atattgtatttatctccatattgagtaggaaaggtagcttcaggactgcccagcttcatc 285
               |||||||| ||||||||||||  |||||| |||||  ||||||| |||||||||||||||
Sbjct: 4755135 atattgtagttatctccatatgaagtagggaaggtcacttcagggctgcccagcttcatc 4755194

                   
Query: 286     ccat 289
               ||||
Sbjct: 4755195 ccat 4755198



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 41/45 (91%)
 Strand = Plus / Plus

                                                            
Query: 40      cacaaacaagtaggtagataagatattctaaaccatgtgatatga 84
               |||||| ||| ||||||||| |||| |||||||||||||||||||
Sbjct: 4754854 cacaaaaaaggaggtagatacgataatctaaaccatgtgatatga 4754898



 Score = 44.1 bits (22), Expect = 0.56
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 417      ccccttctgctccaactcacat 438
                ||||||||||||||||||||||
Sbjct: 14373349 ccccttctgctccaactcacat 14373328
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score =  125 bits (63), Expect = 2e-25
 Identities = 117/135 (86%)
 Strand = Plus / Plus

                                                                           
Query: 305     cccatggtctgccatcaaaactagctaattcggcccgcatttgttgaatttcttgtgcca 364
               |||||||||| || ||  || |||||||||| || |||||||||| ||||||||||||||
Sbjct: 4756840 cccatggtctcccttcggaattagctaattctgctcgcatttgttcaatttcttgtgcca 4756899

                                                                           
Query: 365     tcgaaatcatactcttctccattgctttcctttgttccaccaactcaaagttccccttct 424
               ||||||||||| ||||||||||||||||| | ||||| ||||||| ||| || || ||||
Sbjct: 4756900 tcgaaatcatattcttctccattgctttcttctgttcaaccaactgaaaatttcctttct 4756959

                              
Query: 425     gctccaactcacatg 439
               |||| || |||||||
Sbjct: 4756960 gctctaattcacatg 4756974



 Score =  101 bits (51), Expect = 3e-18
 Identities = 162/199 (81%)
 Strand = Plus / Plus

                                                                           
Query: 444     ccttgcatgagtaagttccagttgaaggccctcaatctctgctttcaaaataggtaactg 503
               ||||||||||  ||||||| || ||||| | ||||||||||||||||| ||||| | |||
Sbjct: 4757068 ccttgcatgaacaagttcctgtcgaagggcatcaatctctgctttcaacataggaatctg 4757127

                                                                           
Query: 504     ttgtttatcagatctctccctactcagctcctgcatgagtgatgcagcctttgcagagag 563
                ||||||| ||||   |||||  | || || |||||||  ||||||| ||| ||||||||
Sbjct: 4757128 ctgtttattagattgttccctggttagttcatgcatgatagatgcagacttcgcagagag 4757187

                                                                           
Query: 564     ttctttcctaacagcaaggagcttctctatttcaccacgaagatgcataacctcatctct 623
                |||||||| ||  ||||| |||| || |||||||| ||||| |||| || |||||||||
Sbjct: 4757188 ctctttcctgactacaaggtgcttatcaatttcaccccgaagctgcacaatctcatctct 4757247

                                  
Query: 624     caaaggctcatttgatcta 642
                |||| |||||||| ||||
Sbjct: 4757248 taaagactcatttgctcta 4757266



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 57/64 (89%)
 Strand = Plus / Plus

                                                                           
Query: 226     atattgtatttatctccatattgagtaggaaaggtagcttcaggactgcccagcttcatc 285
               |||||||| ||||||||||||  |||||| |||||  ||||||| |||||||||||||||
Sbjct: 4755116 atattgtagttatctccatatgaagtagggaaggtcacttcagggctgcccagcttcatc 4755175

                   
Query: 286     ccat 289
               ||||
Sbjct: 4755176 ccat 4755179



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 41/45 (91%)
 Strand = Plus / Plus

                                                            
Query: 40      cacaaacaagtaggtagataagatattctaaaccatgtgatatga 84
               |||||| ||| ||||||||| |||| |||||||||||||||||||
Sbjct: 4754835 cacaaaaaaggaggtagatacgataatctaaaccatgtgatatga 4754879



 Score = 44.1 bits (22), Expect = 0.56
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 417      ccccttctgctccaactcacat 438
                ||||||||||||||||||||||
Sbjct: 14327631 ccccttctgctccaactcacat 14327610
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>emb|AL713946.3|CNS07YPP Oryza sativa chromosome 12, . BAC OJ1005_B07 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 161762

 Score =  125 bits (63), Expect = 2e-25
 Identities = 117/135 (86%)
 Strand = Plus / Minus

                                                                         
Query: 305   cccatggtctgccatcaaaactagctaattcggcccgcatttgttgaatttcttgtgcca 364
             |||||||||| || ||  || |||||||||| || |||||||||| ||||||||||||||
Sbjct: 90272 cccatggtctcccttcggaattagctaattctgctcgcatttgttcaatttcttgtgcca 90213

                                                                         
Query: 365   tcgaaatcatactcttctccattgctttcctttgttccaccaactcaaagttccccttct 424
             ||||||||||| ||||||||||||||||| | ||||| ||||||| ||| || || ||||
Sbjct: 90212 tcgaaatcatattcttctccattgctttcttctgttcaaccaactgaaaatttcctttct 90153

                            
Query: 425   gctccaactcacatg 439
             |||| || |||||||
Sbjct: 90152 gctctaattcacatg 90138



 Score =  101 bits (51), Expect = 3e-18
 Identities = 162/199 (81%)
 Strand = Plus / Minus

                                                                         
Query: 444   ccttgcatgagtaagttccagttgaaggccctcaatctctgctttcaaaataggtaactg 503
             ||||||||||  ||||||| || ||||| | ||||||||||||||||| ||||| | |||
Sbjct: 90044 ccttgcatgaacaagttcctgtcgaagggcatcaatctctgctttcaacataggaatctg 89985

                                                                         
Query: 504   ttgtttatcagatctctccctactcagctcctgcatgagtgatgcagcctttgcagagag 563
              ||||||| ||||   |||||  | || || |||||||  ||||||| ||| ||||||||
Sbjct: 89984 ctgtttattagattgttccctggttagttcatgcatgatagatgcagacttcgcagagag 89925

                                                                         
Query: 564   ttctttcctaacagcaaggagcttctctatttcaccacgaagatgcataacctcatctct 623
              |||||||| ||  ||||| |||| || |||||||| ||||| |||| || |||||||||
Sbjct: 89924 ctctttcctgactacaaggtgcttatcaatttcaccccgaagctgcacaatctcatctct 89865

                                
Query: 624   caaaggctcatttgatcta 642
              |||| |||||||| ||||
Sbjct: 89864 taaagactcatttgctcta 89846



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 57/64 (89%)
 Strand = Plus / Minus

                                                                         
Query: 226   atattgtatttatctccatattgagtaggaaaggtagcttcaggactgcccagcttcatc 285
             |||||||| ||||||||||||  |||||| |||||  ||||||| |||||||||||||||
Sbjct: 91996 atattgtagttatctccatatgaagtagggaaggtcacttcagggctgcccagcttcatc 91937

                 
Query: 286   ccat 289
             ||||
Sbjct: 91936 ccat 91933



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 41/45 (91%)
 Strand = Plus / Minus

                                                          
Query: 40    cacaaacaagtaggtagataagatattctaaaccatgtgatatga 84
             |||||| ||| ||||||||| |||| |||||||||||||||||||
Sbjct: 92277 cacaaaaaaggaggtagatacgataatctaaaccatgtgatatga 92233
to top
>emb|AL732645.4|CNS08C9K Oryza sativa chromosome 12, . BAC OSJNBb0090H23 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 134370

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 417   ccccttctgctccaactcacat 438
             ||||||||||||||||||||||
Sbjct: 80553 ccccttctgctccaactcacat 80532
to top
>ref|XM_470114.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1038

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                            
Query: 369 aatcatactcttctccattgctttcctttgttc 401
           ||||||| | |||||||||||||| ||||||||
Sbjct: 663 aatcatatttttctccattgctttactttgttc 631
to top
>gb|AC150690.7| Bos taurus  BAC CH240-151A24 (Children's Hospital Oakland Research
              Institute Bovine BAC Library (male)) complete sequence
          Length = 194641

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 525    actcagctcctgcatgagtgatgcagcct 553
              ||||||||||||||||| || ||||||||
Sbjct: 134522 actcagctcctgcatgactgctgcagcct 134550
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>gb|AC147916.2| Xenopus tropicalis clone CH216-89A23, complete sequence
          Length = 163647

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 234   tttatctccatattgagtagg 254
             |||||||||||||||||||||
Sbjct: 57899 tttatctccatattgagtagg 57919
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                                 
Query: 369      aatcatactcttctccattgctttcctttgttc 401
                ||||||| | |||||||||||||| ||||||||
Sbjct: 34026897 aatcatatttttctccattgctttactttgttc 34026865
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>gb|AC122023.3| Mus musculus BAC clone RP24-372O13 from 12, complete sequence
          Length = 179947

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 622    ctcaaaggctcatttgatcta 642
              |||||||||||||||||||||
Sbjct: 124563 ctcaaaggctcatttgatcta 124583
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>emb|AL365318.33| Human DNA sequence from clone RP11-159M11 on chromosome 1 Contains a
             novel gene and the 3' end of the SLC22A15 gene for solute
             carrier family 22 (organic cation transporter), member 15,
             complete sequence
          Length = 99575

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 613   acctcatctctcaaaggctca 633
             |||||||||||||||||||||
Sbjct: 25414 acctcatctctcaaaggctca 25394
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>gb|AC080043.5| Homo sapiens chromosome , clone RP11-45M9, complete sequence
          Length = 161443

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 577    gcaaggagcttctctatttca 597
              |||||||||||||||||||||
Sbjct: 118134 gcaaggagcttctctatttca 118114
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>gb|AC090103.4| Homo sapiens chromosome 8, clone RP11-299D14, complete sequence
          Length = 161925

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 577   gcaaggagcttctctatttca 597
             |||||||||||||||||||||
Sbjct: 39837 gcaaggagcttctctatttca 39817
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>gb|AC023566.11| Homo sapiens chromosome 8, clone RP11-660D5, complete sequence
          Length = 184543

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 577    gcaaggagcttctctatttca 597
              |||||||||||||||||||||
Sbjct: 167691 gcaaggagcttctctatttca 167671
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                                 
Query: 369      aatcatactcttctccattgctttcctttgttc 401
                ||||||| | |||||||||||||| ||||||||
Sbjct: 34117369 aatcatatttttctccattgctttactttgttc 34117337
to top
>gb|AC154340.3| Mus musculus BAC clone RP23-238B22 from chromosome 14, complete sequence
          Length = 210115

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 380    tctccattgctttcctttgtt 400
              |||||||||||||||||||||
Sbjct: 124436 tctccattgctttcctttgtt 124416
to top
>gb|AC133007.4| Oryza sativa chromosome 3 BAC OSJNBa0094J08 genomic sequence, complete
             sequence
          Length = 172337

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                              
Query: 369   aatcatactcttctccattgctttcctttgttc 401
             ||||||| | |||||||||||||| ||||||||
Sbjct: 30794 aatcatatttttctccattgctttactttgttc 30826
to top
>gb|AC109642.4| Homo sapiens BAC clone RP11-776F5 from 2, complete sequence
          Length = 74821

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 243   atattgagtaggaaaggtagc 263
             |||||||||||||||||||||
Sbjct: 64243 atattgagtaggaaaggtagc 64223
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>emb|BX530725.11| Mouse DNA sequence from clone RP23-49E16 on chromosome 4, complete
             sequence
          Length = 80674

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 514   gatctctccctactcagctcc 534
             |||||||||||||||||||||
Sbjct: 72861 gatctctccctactcagctcc 72841
to top
>dbj|AK103889.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033150D12, full
           insert sequence
          Length = 1752

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                            
Query: 369 aatcatactcttctccattgctttcctttgttc 401
           ||||||| | |||||||||||||| ||||||||
Sbjct: 998 aatcatatttttctccattgctttactttgttc 966
to top
>dbj|AK073864.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033073P17, full
           insert sequence
          Length = 1560

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                            
Query: 369 aatcatactcttctccattgctttcctttgttc 401
           ||||||| | |||||||||||||| ||||||||
Sbjct: 832 aatcatatttttctccattgctttactttgttc 800
to top
>gb|AY108323.1| Zea mays PCO119733 mRNA sequence
          Length = 1019

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                            
Query: 369 aatcatactcttctccattgctttcctttgttc 401
           ||||||| | |||||||||||||| ||||||||
Sbjct: 774 aatcatatttttctccattgctttactttgttc 742
to top
>dbj|AK113288.1| Ciona intestinalis cDNA, clone:ciad028m11, full insert sequence
          Length = 1591

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 603 aagatgcataacctcatctct 623
           |||||||||||||||||||||
Sbjct: 396 aagatgcataacctcatctct 416
to top
>emb|AL954178.8| Mouse DNA sequence from clone RP23-21J10 on chromosome X, complete
             sequence
          Length = 103135

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 11    taattattaaagcataaagaa 31
             |||||||||||||||||||||
Sbjct: 45924 taattattaaagcataaagaa 45944
to top
>gb|AY510333.1| Rattus norvegicus vomeronasal V1r-type receptor V1rd6 mRNA,
           complete cds
          Length = 963

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 287 catgtgctccacctgtgccc 306
           ||||||||||||||||||||
Sbjct: 309 catgtgctccacctgtgccc 328
to top
>gb|AC118642.11| Mus musculus chromosome 18, clone RP24-112L21, complete sequence
          Length = 193995

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 381   ctccattgctttcctttgtt 400
             ||||||||||||||||||||
Sbjct: 45942 ctccattgctttcctttgtt 45923
to top
>gb|AC134409.12| Mus musculus chromosome 5, clone RP24-355F10, complete sequence
          Length = 141528

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 270   actgcccagcttcatcccat 289
             ||||||||||||||||||||
Sbjct: 40042 actgcccagcttcatcccat 40023
to top
>gb|AC149267.1| Solanum demissum chromosome 5 clone PGEC747E24 map MAP_LOC, complete
             sequence
          Length = 92340

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 55    agataagatattctaaaccatgtgatat 82
             |||||||||||| |||||||| ||||||
Sbjct: 63462 agataagatattttaaaccatctgatat 63435
to top
>gb|AC167123.2| Mus musculus chromosome 7, clone wi1-2141C15, complete sequence
          Length = 42845

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 198   aggacctttctcagaaactc 217
             ||||||||||||||||||||
Sbjct: 30930 aggacctttctcagaaactc 30911
to top
>gb|DQ179630.1| Fundulus sciadicus isolate S. Platte R. 2 cytochrome b gene,
           partial cds; mitochondrial
          Length = 725

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 229 ttgtatttatctccatattg 248
           ||||||||||||||||||||
Sbjct: 237 ttgtatttatctccatattg 256
to top
>gb|AC166072.2| Mus musculus BAC clone RP23-226J22 from chromosome 3, complete sequence
          Length = 221724

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 500   actgttgtttatcagatctc 519
             ||||||||||||||||||||
Sbjct: 19440 actgttgtttatcagatctc 19421
to top
>gb|AC073900.6| Homo sapiens BAC clone RP11-172J11 from 7, complete sequence
          Length = 86735

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 488   tcaaaataggtaactgttgt 507
             ||||||||||||||||||||
Sbjct: 79110 tcaaaataggtaactgttgt 79091
to top
>gb|AC124408.4| Mus musculus BAC clone RP24-262E22 from chromosome 14, complete
             sequence
          Length = 159082

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 417   ccccttctgctccaactcac 436
             ||||||||||||||||||||
Sbjct: 41746 ccccttctgctccaactcac 41727
to top
>gb|AY843891.1| Hyla pardalis cytochrome b (cytb) gene, partial cds; mitochondrial
          Length = 385

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 229 ttgtatttatctccatattg 248
           ||||||||||||||||||||
Sbjct: 259 ttgtatttatctccatattg 278
to top
>ref|NM_001008923.1| Rattus norvegicus vomeronasal 1 receptor, d6 (V1rd6), mRNA
          Length = 963

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 287 catgtgctccacctgtgccc 306
           ||||||||||||||||||||
Sbjct: 309 catgtgctccacctgtgccc 328
to top
>gb|AY748295.1| Aphyosemion etsamense isolate ETS925c cytochrome b (cytb) gene,
           partial cds; mitochondrial
          Length = 800

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 229 ttgtatttatctccatattg 248
           ||||||||||||||||||||
Sbjct: 282 ttgtatttatctccatattg 301
to top
>gb|AC165165.3| Mus musculus BAC clone RP23-121B15 from chromosome 3, complete sequence
          Length = 228648

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 500    actgttgtttatcagatctc 519
              ||||||||||||||||||||
Sbjct: 176842 actgttgtttatcagatctc 176823
to top
>emb|Z86090.10|HS229A8 Human DNA sequence from clone CTA-229A8 on chromosome 22q13 Contains an
             RPL4 (60S Ribosomal Protein L4) and a GAPD (Liver
             Glyceraldehyde 3-Phosphate Dehydrogenase (EC 1.2.1.12))
             pseudogene, the GPR24 gene for G protein-coupled receptor
             24 (SLC1), ESTs, an STS, GSSs, genomic marker D22S279, a
             ca repeat polymorphism and a putative CpG island, complete
             sequence
          Length = 122557

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 396   ttgttccaccaactcaaagt 415
             ||||||||||||||||||||
Sbjct: 68557 ttgttccaccaactcaaagt 68538
to top
>emb|AL160404.7| Human DNA sequence from clone RP1-318G22 on chromosome 6, complete
             sequence
          Length = 27503

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 376   ctcttctccattgctttcctttgt 399
             ||||||||||||||||| ||||||
Sbjct: 21027 ctcttctccattgcttttctttgt 21050
to top
>gb|AF299273.1| Aphanius fasciatus cytochrome b (cyt b) gene, complete cds;
           mitochondrial gene for mitochondrial product
          Length = 1140

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 229 ttgtatttatctccatattg 248
           ||||||||||||||||||||
Sbjct: 276 ttgtatttatctccatattg 295
to top
>gb|CP000083.1| Colwellia psychrerythraea 34H, complete genome
          Length = 5373180

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 230     tgtatttatctccatattga 249
               ||||||||||||||||||||
Sbjct: 1716325 tgtatttatctccatattga 1716344
to top
>gb|AC098655.2| Homo sapiens chromosome 1 clone RP11-293P10, complete sequence
          Length = 191978

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 243    atattgagtaggaaaggtag 262
              ||||||||||||||||||||
Sbjct: 146713 atattgagtaggaaaggtag 146694
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>gb|AF378967.1| Lacerta pater haplotype 5 cytochrome b (cytb) gene, partial cds;
           mitochondrial gene for mitochondrial product
          Length = 663

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 229 ttgtatttatctccatattg 248
           ||||||||||||||||||||
Sbjct: 180 ttgtatttatctccatattg 199
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>gb|AF378966.1| Lacerta pater haplotype 4 cytochrome b (cytb) gene, partial cds;
           mitochondrial gene for mitochondrial product
          Length = 663

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 229 ttgtatttatctccatattg 248
           ||||||||||||||||||||
Sbjct: 180 ttgtatttatctccatattg 199
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>gb|AF378965.1| Lacerta pater haplotype 3 cytochrome b (cytb) gene, partial cds;
           mitochondrial gene for mitochondrial product
          Length = 663

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 229 ttgtatttatctccatattg 248
           ||||||||||||||||||||
Sbjct: 180 ttgtatttatctccatattg 199
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>gb|AF378964.1| Lacerta pater haplotype 2 cytochrome b (cytb) gene, partial cds;
           mitochondrial gene for mitochondrial product
          Length = 663

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 229 ttgtatttatctccatattg 248
           ||||||||||||||||||||
Sbjct: 180 ttgtatttatctccatattg 199
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>gb|AF378963.1| Lacerta pater haplotype 1 cytochrome b (cytb) gene, partial cds;
           mitochondrial gene for mitochondrial product
          Length = 663

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 229 ttgtatttatctccatattg 248
           ||||||||||||||||||||
Sbjct: 180 ttgtatttatctccatattg 199
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>gb|AC099769.2| Homo sapiens chromosome 1 clone RP5-963M5, complete sequence
          Length = 99680

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 243   atattgagtaggaaaggtag 262
             ||||||||||||||||||||
Sbjct: 27460 atattgagtaggaaaggtag 27441
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>emb|BX571839.8| Zebrafish DNA sequence from clone DKEY-259P7 in linkage group 16,
             complete sequence
          Length = 168648

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 502   tgttgtttatcagatctctc 521
             ||||||||||||||||||||
Sbjct: 30864 tgttgtttatcagatctctc 30845
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>dbj|AP008231.1| Synechococcus elongatus PCC 6301 DNA, complete genome
          Length = 2696255

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 537    catgagtgatgcagcctttgcagagagt 564
              ||||| ||||||||| ||||||||||||
Sbjct: 355717 catgactgatgcagcgtttgcagagagt 355690
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>gb|AC144923.7| Mus musculus chromosome 7, clone RP23-366A16, complete sequence
          Length = 177745

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 198    aggacctttctcagaaactc 217
              ||||||||||||||||||||
Sbjct: 162578 aggacctttctcagaaactc 162597
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>gb|AF252379.1|AF252379 Eurycea wilderae cytochrome b gene, partial cds; mitochondrial gene
           for mitochondrial product
          Length = 336

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 229 ttgtatttatctccatattg 248
           ||||||||||||||||||||
Sbjct: 230 ttgtatttatctccatattg 249
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>gb|AY663748.1| Bathybates graueri isolate 2228 cytochrome b (cytb) gene, partial
           cds; mitochondrial
          Length = 402

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 229 ttgtatttatctccatattg 248
           ||||||||||||||||||||
Sbjct: 276 ttgtatttatctccatattg 295
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>gb|AY663746.1| Bathybates graueri isolate 1760 cytochrome b (cytb) gene, partial
           cds; mitochondrial
          Length = 402

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 229 ttgtatttatctccatattg 248
           ||||||||||||||||||||
Sbjct: 276 ttgtatttatctccatattg 295
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>gb|AC073062.7| Homo sapiens BAC clone RP11-132H1 from 2, complete sequence
          Length = 135822

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 564   ttctttcctaacagcaaggagctt 587
             |||||||||||||||| |||||||
Sbjct: 95148 ttctttcctaacagcatggagctt 95171
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>gb|AF186765.1|AF186765 Anolis bonairensis cytochrome b gene, partial sequence,
           mitochondrial gene for mitochondrial product
          Length = 600

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 229 ttgtatttatctccatattg 248
           ||||||||||||||||||||
Sbjct: 198 ttgtatttatctccatattg 217
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>gb|AF186764.1|AF186764 Anolis luciae cytochrome b gene, partial sequence, mitochondrial
           gene for mitochondrial product
          Length = 600

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 229 ttgtatttatctccatattg 248
           ||||||||||||||||||||
Sbjct: 198 ttgtatttatctccatattg 217
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>emb|X67680.1|SSPNIR Synechococcus sp. nir gene for nitrite reductase
          Length = 2214

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 537 catgagtgatgcagcctttgcagagagt 564
           ||||| ||||||||| ||||||||||||
Sbjct: 275 catgactgatgcagcgtttgcagagagt 248
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>gb|AC137947.12| Mus musculus chromosome 5, clone RP23-362I3, complete sequence
          Length = 214295

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 270    actgcccagcttcatcccat 289
              ||||||||||||||||||||
Sbjct: 176783 actgcccagcttcatcccat 176764
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>gb|AC005208.1|AC005208 Homo sapiens chromosome 17, clone hRPK.1064_E_11, complete sequence
          Length = 123211

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 535   tgcatgagtgatgcagcctttgca 558
             ||||||||| ||||||||||||||
Sbjct: 98546 tgcatgagtcatgcagcctttgca 98569
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>gb|U77121.1|FSU77121 Fundulus sciadicus cytochrome b (cytb) gene, mitochondrial gene
           encoding mitochondrial protein, partial cds
          Length = 357

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 229 ttgtatttatctccatattg 248
           ||||||||||||||||||||
Sbjct: 276 ttgtatttatctccatattg 295
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>gb|CP000100.1| Synechococcus elongatus PCC 7942, complete genome
          Length = 2695903

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 537     catgagtgatgcagcctttgcagagagt 564
               ||||| ||||||||| ||||||||||||
Sbjct: 1265087 catgactgatgcagcgtttgcagagagt 1265114
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>dbj|D16303.1|SYONIRB Synechococcus sp. nirA gene (partial cds), nirB gene and ntcB gene
           (complete cds)
          Length = 2500

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 537 catgagtgatgcagcctttgcagagagt 564
           ||||| ||||||||| ||||||||||||
Sbjct: 316 catgactgatgcagcgtttgcagagagt 343


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,610,379
Number of Sequences: 3902068
Number of extensions: 6610379
Number of successful extensions: 131513
Number of sequences better than 10.0: 67
Number of HSP's better than 10.0 without gapping: 69
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 131162
Number of HSP's gapped (non-prelim): 351
length of query: 642
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 619
effective length of database: 17,143,297,704
effective search space: 10611701278776
effective search space used: 10611701278776
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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