ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd3c16
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY107437.1| Zea mays PCO062669 mRNA sequence 56 1e-04
2gb|AY360391.1| Oryza sativa (japonica cultivar-group) chromosome... 44 0.55
3gb|AY360390.1| Oryza sativa (japonica cultivar-group) chromosome... 44 0.55
4dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.55
5dbj|AP005166.2| Oryza sativa (japonica cultivar-group) genomic D... 44 0.55
6dbj|AP005162.2| Oryza sativa (japonica cultivar-group) genomic D... 44 0.55
7dbj|AK105754.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.55
8dbj|AK100410.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.55
9gb|AC120193.4| Homo sapiens chromosome 8, clone RP11-10H17, comp... 42 2.2
10gb|AC024958.8| Homo sapiens, clone RP11-561E1, complete sequence 42 2.2
11ref|NM_112531.2| Arabidopsis thaliana unknown protein AT3G16580 ... 40 8.6
12gb|AY791515.1| Campylobacter jejuni subsp. jejuni ATCC 43446 put... 40 8.6
13gb|AF130466.2| Campylobacter jejuni OH4384 peptide chain release... 40 8.6
14gb|AC099025.2| Drosophila melanogaster clone BACR04O19, complete... 40 8.6
15ref|XM_650152.1| Entamoeba histolytica HM-1:IMSS Ser/Thr protein... 40 8.6
16emb|BX088523.6| Human DNA sequence from clone DASS-179P20 on chr... 40 8.6
17emb|AL662890.3| Human DNA sequence from clone XXbac-308K3 on chr... 40 8.6
18emb|AL671879.2| Human DNA sequence from clone XXbac-254L4 on chr... 40 8.6
19gb|AC024218.17| Homo sapiens 3 BAC RP11-668N23 (Roswell Park Can... 40 8.6
20emb|AL133258.16| Human DNA sequence from clone RP1-207F6 on chro... 40 8.6
21gb|AC087237.14| Homo sapiens 12p BAC RP11-405A12 (Roswell Park C... 40 8.6
22emb|CR391929.9| Zebrafish DNA sequence from clone DKEYP-86B5, co... 40 8.6
23emb|AJ621740.1| Gallus gallus GMCSF gene for granulocyte-macroph... 40 8.6
24emb|CR388089.8| Zebrafish DNA sequence from clone CH211-87C14, c... 40 8.6
25ref|NM_137238.2| Drosophila melanogaster SP2353 CG8403-RA (SP235... 40 8.6
26ref|NM_079010.2| Drosophila melanogaster Argonaute 1 CG6671-RB, ... 40 8.6
27gb|AC019163.8| Homo sapiens BAC clone RP11-87F15 from 4, complet... 40 8.6
28emb|BX247906.8| Zebrafish DNA sequence from clone DKEY-9O22 in l... 40 8.6
29gb|AC160823.2| Xenopus tropicalis BMP4 gene, complete cds, compl... 40 8.6
30emb|BX296548.20| Pig DNA sequence from clone PigE-193I9, complet... 40 8.6
31gb|AC007851.6|AC007851 Drosophila melanogaster, chromosome 2R, r... 40 8.6
32gb|AC008073.4| Homo sapiens BAC clone RP11-507M3 from 2, complet... 40 8.6
33gb|BT005043.1| Arabidopsis thaliana clone U20755 unknown protein... 40 8.6
34gb|BT003948.1| Arabidopsis thaliana clone RAFL15-21-P20 (R20755)... 40 8.6
35ref|XM_228073.3| PREDICTED: Rattus norvegicus protein O-fucosylt... 40 8.6
36gb|AY085675.1| Arabidopsis thaliana clone 16938 mRNA, complete s... 40 8.6
37gb|CP000026.1| Salmonella enterica subsp. enterica serovar Parat... 40 8.6
38gb|AF239610.1|AF239610 Drosophila melanogaster SP2353 mRNA, comp... 40 8.6
39dbj|AB022217.1| Arabidopsis thaliana genomic DNA, chromosome 3, ... 40 8.6
40gb|AC158911.7| Mus musculus chromosome 5, clone RP24-363D4, comp... 40 8.6
41gb|AE003816.4| Drosophila melanogaster chromosome 2R, section 34... 40 8.6
42gb|AE003808.4| Drosophila melanogaster chromosome 2R, section 42... 40 8.6
43emb|AL953884.15| Zebrafish DNA sequence from clone CH211-207L13 ... 40 8.6
44gb|CP000209.1| Drosophila melanogaster genomic scaffold 21100002... 40 8.6
45gb|AC004305.1|AC004305 Drosophila melanogaster DNA sequence (P1 ... 40 8.6
46dbj|AB035447.1| Drosophila melanogaster dAGO1 mRNA for argonaute... 40 8.6 
>gb|AY107437.1| Zea mays PCO062669 mRNA sequence
          Length = 1217

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 56/64 (87%), Gaps = 1/64 (1%)
 Strand = Plus / Minus

                                                                       
Query: 504 cccaaacctaacagcagcacttgctatgcttccaagaccaccattctccaaaagaaattt 563
           ||||||||||| ||||||  |||  ||||||| ||||||||||| || ||||||||||||
Sbjct: 679 cccaaacctaagagcagccattgtcatgcttcaaagaccaccatgct-caaaagaaattt 621

               
Query: 564 aaca 567
           ||||
Sbjct: 620 aaca 617
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>gb|AY360391.1| Oryza sativa (japonica cultivar-group) chromosome 8 BAC OSJNBa0023H09,
             complete sequence
          Length = 178320

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                       
Query: 519   agcacttgctatgcttccaagaccaccattctccaaaagaaa 560
             |||||||| |||||||||||||| | |||  |||||||||||
Sbjct: 21416 agcacttgttatgcttccaagacaagcatcttccaaaagaaa 21375
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>gb|AY360390.1| Oryza sativa (japonica cultivar-group) chromosome 8 BAC OSJNBa0074N12,
             complete sequence
          Length = 187972

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 37/42 (88%)
 Strand = Plus / Plus

                                                       
Query: 519   agcacttgctatgcttccaagaccaccattctccaaaagaaa 560
             |||||||| |||||||||||||| | |||  |||||||||||
Sbjct: 55519 agcacttgttatgcttccaagacaagcatcttccaaaagaaa 55560
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 37/42 (88%)
 Strand = Plus / Plus

                                                          
Query: 519      agcacttgctatgcttccaagaccaccattctccaaaagaaa 560
                |||||||| |||||||||||||| | |||  |||||||||||
Sbjct: 12718340 agcacttgttatgcttccaagacaagcatcttccaaaagaaa 12718381
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>dbj|AP005166.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBa0058D03
          Length = 184235

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 37/42 (88%)
 Strand = Plus / Plus

                                                       
Query: 519   agcacttgctatgcttccaagaccaccattctccaaaagaaa 560
             |||||||| |||||||||||||| | |||  |||||||||||
Sbjct: 62335 agcacttgttatgcttccaagacaagcatcttccaaaagaaa 62376
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>dbj|AP005162.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OSJNBa0051M20
          Length = 152702

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 37/42 (88%)
 Strand = Plus / Plus

                                                        
Query: 519    agcacttgctatgcttccaagaccaccattctccaaaagaaa 560
              |||||||| |||||||||||||| | |||  |||||||||||
Sbjct: 104309 agcacttgttatgcttccaagacaagcatcttccaaaagaaa 104350
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>dbj|AK105754.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-C07, full
            insert sequence
          Length = 3365

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                      
Query: 519  agcacttgctatgcttccaagaccaccattctccaaaagaaa 560
            |||||||| |||||||||||||| | |||  |||||||||||
Sbjct: 2812 agcacttgttatgcttccaagacaagcatcttccaaaagaaa 2771
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>dbj|AK100410.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023087H17, full
            insert sequence
          Length = 4003

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                      
Query: 519  agcacttgctatgcttccaagaccaccattctccaaaagaaa 560
            |||||||| |||||||||||||| | |||  |||||||||||
Sbjct: 3522 agcacttgttatgcttccaagacaagcatcttccaaaagaaa 3481
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>gb|AC120193.4| Homo sapiens chromosome 8, clone RP11-10H17, complete sequence
          Length = 174556

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 464    caccctccaacctccaactggcccc 488
              ||||||||| |||||||||||||||
Sbjct: 115069 caccctccaccctccaactggcccc 115045
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>gb|AC024958.8| Homo sapiens, clone RP11-561E1, complete sequence
          Length = 190534

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 464    caccctccaacctccaactggcccc 488
              ||||||||| |||||||||||||||
Sbjct: 143834 caccctccaccctccaactggcccc 143858
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>ref|NM_112531.2| Arabidopsis thaliana unknown protein AT3G16580 mRNA, complete cds
          Length = 1371

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 68  aaaacaaattgttcaaaacatata 91
           ||||||||||||||| ||||||||
Sbjct: 582 aaaacaaattgttcataacatata 605
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>gb|AY791515.1| Campylobacter jejuni subsp. jejuni ATCC 43446 putative peptide chain
            release factor 2 (prfB) gene, partial cds;
            alpha-2,3-sialyltransferase (cstI), CysD (cysD), CysN
            (cysN), putative sodium/sulfate symporter, putative
            adenylylsulfate kinase (cysC), hypothetical protein,
            putative glycosyltransferase, and hypothetical protein
            genes, complete cds; and Cj1457c (Cj1457c) gene, partial
            cds
          Length = 10484

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 66   ccaaaacaaattgttcaaaa 85
            ||||||||||||||||||||
Sbjct: 6458 ccaaaacaaattgttcaaaa 6439
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>gb|AF130466.2| Campylobacter jejuni OH4384 peptide chain release factor 2 (prfB)
            gene, partial cds; alpha-2,3-sialyltransferase (cst-I),
            sulfate adenylyltransferase subunit CysD (cysD), sulfate
            adenylyltransferase subunit CysN (cysN), putative
            sodium/sulfate symporter (sodium sulfate symporter),
            putative adenylysulfate kinase (cysC), hypothetical
            protein, putative glycosyltransferase, and hypothetical
            protein genes, complete cds; and cj1457c gene, partial
            cds
          Length = 11164

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 66   ccaaaacaaattgttcaaaa 85
            ||||||||||||||||||||
Sbjct: 7145 ccaaaacaaattgttcaaaa 7126
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>gb|AC099025.2| Drosophila melanogaster clone BACR04O19, complete sequence
          Length = 160827

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 144   caacagcaaatcgcaaacat 163
             ||||||||||||||||||||
Sbjct: 72539 caacagcaaatcgcaaacat 72558
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>ref|XM_650152.1| Entamoeba histolytica HM-1:IMSS Ser/Thr protein phosphatase, putative
            (33.t00008) partial mRNA
          Length = 1569

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 72   caaattgttcaaaacatata 91
            ||||||||||||||||||||
Sbjct: 1144 caaattgttcaaaacatata 1125
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>emb|BX088523.6| Human DNA sequence from clone DASS-179P20 on chromosome 6, complete
             sequence
          Length = 87597

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 30    acaaaaagggttatgttttc 49
             ||||||||||||||||||||
Sbjct: 30543 acaaaaagggttatgttttc 30524
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>emb|AL662890.3| Human DNA sequence from clone XXbac-308K3 on chromosome 6 Contains a
            laminin receptor 1 (ribosomal protein SA, 67kDa) (LAMR1)
            pseudogene, a pseudogene similar to part of nucleolar
            protein 5A NOL5A, a ribosomal protein L13 (RPL13)(BBC1)
            pseudogene and two CpG islands, complete sequence
          Length = 137288

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 30   acaaaaagggttatgttttc 49
            ||||||||||||||||||||
Sbjct: 5668 acaaaaagggttatgttttc 5649
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>emb|AL671879.2| Human DNA sequence from clone XXbac-254L4 on chromosome 6 contains a
              novel SCAN domain and Integrase core domain containing
              protein (FLJ31087, KIAA1925), a putative novel transcript,
              a laminin receptor 1 (ribosomal protein SA, 67kDa) (LAMR1)
              pseudogene and two CpG islands, complete sequence
          Length = 176995

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 30     acaaaaagggttatgttttc 49
              ||||||||||||||||||||
Sbjct: 161777 acaaaaagggttatgttttc 161758
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>gb|AC024218.17| Homo sapiens 3 BAC RP11-668N23 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 141860

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 566    cactatgaaagggctgcagg 585
              ||||||||||||||||||||
Sbjct: 110312 cactatgaaagggctgcagg 110293
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>emb|AL133258.16| Human DNA sequence from clone RP1-207F6 on chromosome 6 Contains
           the 3' end of the gene for a novel nucleolar protein
           NOP56 like protein, ESTs, STSs and GSSs, complete
           sequence
          Length = 73666

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 30  acaaaaagggttatgttttc 49
           ||||||||||||||||||||
Sbjct: 183 acaaaaagggttatgttttc 164
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>gb|AC087237.14| Homo sapiens 12p BAC RP11-405A12 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 166380

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 550    tccaaaagaaatttaacact 569
              ||||||||||||||||||||
Sbjct: 133338 tccaaaagaaatttaacact 133357
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>emb|CR391929.9| Zebrafish DNA sequence from clone DKEYP-86B5, complete sequence
          Length = 223724

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 69    aaacaaattgttcaaaacat 88
             ||||||||||||||||||||
Sbjct: 34706 aaacaaattgttcaaaacat 34687
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>emb|AJ621740.1| Gallus gallus GMCSF gene for granulocyte-macrophage colony-stimulating
             factor and IL3 gene for interleukin-3, BAC bCHORI92M14
             clone, contig 1
          Length = 54760

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 285   caccacagcagccacacact 304
             ||||||||||||||||||||
Sbjct: 21076 caccacagcagccacacact 21095
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>emb|CR388089.8| Zebrafish DNA sequence from clone CH211-87C14, complete sequence
          Length = 165808

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 317 tatggtagacagtttatcca 336
           ||||||||||||||||||||
Sbjct: 205 tatggtagacagtttatcca 186
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>ref|NM_137238.2| Drosophila melanogaster SP2353 CG8403-RA (SP2353), mRNA
          Length = 5166

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 144  caacagcaaatcgcaaacat 163
            ||||||||||||||||||||
Sbjct: 1639 caacagcaaatcgcaaacat 1658
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>ref|NM_079010.2| Drosophila melanogaster Argonaute 1 CG6671-RB, transcript variant B
           (AGO1), mRNA
          Length = 4576

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 287 ccacagcagccacacactgg 306
           ||||||||||||||||||||
Sbjct: 27  ccacagcagccacacactgg 8
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>gb|AC019163.8| Homo sapiens BAC clone RP11-87F15 from 4, complete sequence
          Length = 217921

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 463   tcaccctccaacctccaactggccccgg 490
             ||||||||||||| || |||||||||||
Sbjct: 31804 tcaccctccaaccccccactggccccgg 31831
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>emb|BX247906.8| Zebrafish DNA sequence from clone DKEY-9O22 in linkage group 24, complete
              sequence
          Length = 213917

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 535    ccaagaccaccattctccaa 554
              ||||||||||||||||||||
Sbjct: 124779 ccaagaccaccattctccaa 124798
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>gb|AC160823.2| Xenopus tropicalis BMP4 gene, complete cds, complete sequence
          Length = 67072

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 272   ggcatttagtttccaccacagcag 295
             ||||||||||||||||||| ||||
Sbjct: 59030 ggcatttagtttccaccactgcag 59007
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>emb|BX296548.20| Pig DNA sequence from clone PigE-193I9, complete sequence
          Length = 172252

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 468  ctccaacctccaactggccc 487
            ||||||||||||||||||||
Sbjct: 6302 ctccaacctccaactggccc 6321
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>gb|AC007851.6|AC007851 Drosophila melanogaster, chromosome 2R, region 50C-50D, BAC clone
             BACR06M19, complete sequence
          Length = 183161

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 287   ccacagcagccacacactgg 306
             ||||||||||||||||||||
Sbjct: 77048 ccacagcagccacacactgg 77029
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>gb|AC008073.4| Homo sapiens BAC clone RP11-507M3 from 2, complete sequence
          Length = 166660

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 550   tccaaaagaaatttaacact 569
             ||||||||||||||||||||
Sbjct: 53545 tccaaaagaaatttaacact 53526
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>gb|BT005043.1| Arabidopsis thaliana clone U20755 unknown protein (At3g16580) mRNA,
           complete cds
          Length = 1180

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 68  aaaacaaattgttcaaaacatata 91
           ||||||||||||||| ||||||||
Sbjct: 561 aaaacaaattgttcataacatata 584
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>gb|BT003948.1| Arabidopsis thaliana clone RAFL15-21-P20 (R20755) unknown protein
           (At3g16580) mRNA, complete cds
          Length = 1387

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 68  aaaacaaattgttcaaaacatata 91
           ||||||||||||||| ||||||||
Sbjct: 582 aaaacaaattgttcataacatata 605
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>ref|XM_228073.3| PREDICTED: Rattus norvegicus protein O-fucosyltransferase 2
            (predicted) (Pofut2_predicted), mRNA
          Length = 2484

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 295  gccacacactggccattctc 314
            ||||||||||||||||||||
Sbjct: 1894 gccacacactggccattctc 1875
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>gb|AY085675.1| Arabidopsis thaliana clone 16938 mRNA, complete sequence
          Length = 1318

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 68  aaaacaaattgttcaaaacatata 91
           ||||||||||||||| ||||||||
Sbjct: 575 aaaacaaattgttcataacatata 598
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>gb|CP000026.1| Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150
          Length = 4585229

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 550    tccaaaagaaatttaacact 569
              ||||||||||||||||||||
Sbjct: 869791 tccaaaagaaatttaacact 869772
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>gb|AF239610.1|AF239610 Drosophila melanogaster SP2353 mRNA, complete cds
          Length = 5166

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 144  caacagcaaatcgcaaacat 163
            ||||||||||||||||||||
Sbjct: 1639 caacagcaaatcgcaaacat 1658
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>dbj|AB022217.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MGL6
          Length = 79459

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 68    aaaacaaattgttcaaaacatata 91
             ||||||||||||||| ||||||||
Sbjct: 14215 aaaacaaattgttcataacatata 14192
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>gb|AC158911.7| Mus musculus chromosome 5, clone RP24-363D4, complete sequence
          Length = 119381

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 433   ttcatccccatcaaacagtccaaa 456
             ||||||||||| ||||||||||||
Sbjct: 74777 ttcatccccataaaacagtccaaa 74754
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>gb|AE003816.4| Drosophila melanogaster chromosome 2R, section 34 of 73 of the complete
             sequence
          Length = 287287

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 287   ccacagcagccacacactgg 306
             ||||||||||||||||||||
Sbjct: 95192 ccacagcagccacacactgg 95211
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>gb|AE003808.4| Drosophila melanogaster chromosome 2R, section 42 of 73 of the complete
             sequence
          Length = 260367

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 144   caacagcaaatcgcaaacat 163
             ||||||||||||||||||||
Sbjct: 98794 caacagcaaatcgcaaacat 98813
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>emb|AL953884.15| Zebrafish DNA sequence from clone CH211-207L13 in linkage group 14,
              complete sequence
          Length = 201115

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 60     caaacaccaaaacaaattgt 79
              ||||||||||||||||||||
Sbjct: 179171 caaacaccaaaacaaattgt 179152
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>gb|CP000209.1| Drosophila melanogaster genomic scaffold 211000022280773
          Length = 49681

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 515   cagcagcacttgctatgctt 534
             ||||||||||||||||||||
Sbjct: 23045 cagcagcacttgctatgctt 23026
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>gb|AC004305.1|AC004305 Drosophila melanogaster DNA sequence (P1 DS04822 (D197)), complete
             sequence
          Length = 38205

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 144   caacagcaaatcgcaaacat 163
             ||||||||||||||||||||
Sbjct: 12959 caacagcaaatcgcaaacat 12940
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>dbj|AB035447.1| Drosophila melanogaster dAGO1 mRNA for argonaute protein, complete
           cds
          Length = 3586

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 287 ccacagcagccacacactgg 306
           ||||||||||||||||||||
Sbjct: 27  ccacagcagccacacactgg 8


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,197,301
Number of Sequences: 3902068
Number of extensions: 5197301
Number of successful extensions: 97125
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 97007
Number of HSP's gapped (non-prelim): 117
length of query: 631
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 608
effective length of database: 17,143,297,704
effective search space: 10423125004032
effective search space used: 10423125004032
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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