>gb|AY108690.1| Zea mays PCO097961 mRNA sequence
          Length = 612

 Score =  107 bits (54), Expect = 3e-20
 Identities = 93/106 (87%)
 Strand = Plus / Minus

                                                                       
Query: 321 gaagacgagccggccttcctgaaaaccctgccaccaaagaggtccttgccgagcctcccc 380
           |||||||| ||| |||| |||||||||||||| |||||||| ||||| |||| |||  ||
Sbjct: 374 gaagacgacccgaccttgctgaaaaccctgccgccaaagagctccttcccgatcctagcc 315

                                                         
Query: 381 ttgaaggggaactgcttcttgaaacggttccggaacagcgagccgc 426
           ||||||||||||||| ||||||| ||||| ||||||| ||||||||
Sbjct: 314 ttgaaggggaactgcctcttgaagcggttgcggaacaacgagccgc 269

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 107/129 (82%)
 Strand = Plus / Plus

                                                                            
Query: 334      ccttcctgaaaaccctgccaccaaagaggtccttgccgagcctccccttgaaggggaact 393
                ||||| ||||||| || ||||| ||||| || || || | |||||||||||||| |||||
Sbjct: 11876319 ccttcttgaaaactctaccaccgaagagatctttcccaaacctccccttgaaggagaact 11876378

                                                                            
Query: 394      gcttcttgaaacggttccggaacagcgagccgctgcgcgctggcgcgagcgcagactgat 453
                ||||||| |||||||| ||||||| || ||| |||||   || | | || ||||||||||
Sbjct: 11876379 gcttcttaaaacggtttcggaacatcgtgccactgcgtcttgccacaagggcagactgat 11876438

                         
Query: 454      ttctcttca 462
                |||||||||
Sbjct: 11876439 ttctcttca 11876447

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 107/129 (82%)
 Strand = Plus / Plus

                                                                            
Query: 334      ccttcctgaaaaccctgccaccaaagaggtccttgccgagcctccccttgaaggggaact 393
                ||||| ||||||| || ||||| ||||| || || || | |||||||||||||| |||||
Sbjct: 11873082 ccttcttgaaaactctaccaccgaagagatctttcccaaacctccccttgaaggagaact 11873141

                                                                            
Query: 394      gcttcttgaaacggttccggaacagcgagccgctgcgcgctggcgcgagcgcagactgat 453
                ||||||| |||||||| ||||||| || ||| |||||   || | | || ||||||||||
Sbjct: 11873142 gcttcttaaaacggtttcggaacatcgtgccactgcgtcttgccacaagggcagactgat 11873201

                         
Query: 454      ttctcttca 462
                |||||||||
Sbjct: 11873202 ttctcttca 11873210

>gb|AC137070.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBa0035J18, from chromsome 3, complete sequence
          Length = 162711

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 107/129 (82%)
 Strand = Plus / Minus

                                                                         
Query: 334   ccttcctgaaaaccctgccaccaaagaggtccttgccgagcctccccttgaaggggaact 393
             ||||| ||||||| || ||||| ||||| || || || | |||||||||||||| |||||
Sbjct: 34334 ccttcttgaaaactctaccaccgaagagatctttcccaaacctccccttgaaggagaact 34275

                                                                         
Query: 394   gcttcttgaaacggttccggaacagcgagccgctgcgcgctggcgcgagcgcagactgat 453
             ||||||| |||||||| ||||||| || ||| |||||   || | | || ||||||||||
Sbjct: 34274 gcttcttaaaacggtttcggaacatcgtgccactgcgtcttgccacaagggcagactgat 34215

                      
Query: 454   ttctcttca 462
             |||||||||
Sbjct: 34214 ttctcttca 34206

>dbj|AK067657.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013115O15, full
            insert sequence
          Length = 3802

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 107/129 (82%)
 Strand = Plus / Minus

                                                                        
Query: 334  ccttcctgaaaaccctgccaccaaagaggtccttgccgagcctccccttgaaggggaact 393
            ||||| ||||||| || ||||| ||||| || || || | |||||||||||||| |||||
Sbjct: 3482 ccttcttgaaaactctaccaccgaagagatctttcccaaacctccccttgaaggagaact 3423

                                                                        
Query: 394  gcttcttgaaacggttccggaacagcgagccgctgcgcgctggcgcgagcgcagactgat 453
            ||||||| |||||||| ||||||| || ||| |||||   || | | || ||||||||||
Sbjct: 3422 gcttcttaaaacggtttcggaacatcgtgccactgcgtcttgccacaagggcagactgat 3363

                     
Query: 454  ttctcttca 462
            |||||||||
Sbjct: 3362 ttctcttca 3354

>dbj|AK066058.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013050C14, full
            insert sequence
          Length = 1988

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 107/129 (82%)
 Strand = Plus / Minus

                                                                        
Query: 334  ccttcctgaaaaccctgccaccaaagaggtccttgccgagcctccccttgaaggggaact 393
            ||||| ||||||| || ||||| ||||| || || || | |||||||||||||| |||||
Sbjct: 1617 ccttcttgaaaactctaccaccgaagagatctttcccaaacctccccttgaaggagaact 1558

                                                                        
Query: 394  gcttcttgaaacggttccggaacagcgagccgctgcgcgctggcgcgagcgcagactgat 453
            ||||||| |||||||| ||||||| || ||| |||||   || | | || ||||||||||
Sbjct: 1557 gcttcttaaaacggtttcggaacatcgtgccactgcgtcttgccacaagggcagactgat 1498

                     
Query: 454  ttctcttca 462
            |||||||||
Sbjct: 1497 ttctcttca 1489

>dbj|AK060759.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-032-H11, full
            insert sequence
          Length = 2909

 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 106/129 (82%)
 Strand = Plus / Minus

                                                                        
Query: 334  ccttcctgaaaaccctgccaccaaagaggtccttgccgagcctccccttgaaggggaact 393
            ||||| ||||||| || ||||| ||||| || || || | |||||||||||||| |||||
Sbjct: 2569 ccttcttgaaaactctaccaccgaagagatctttcccaaacctccccttgaaggagaact 2510

                                                                        
Query: 394  gcttcttgaaacggttccggaacagcgagccgctgcgcgctggcgcgagcgcagactgat 453
            ||||||| |||||||| ||||||| || ||| |||||   || | | || ||||||||||
Sbjct: 2509 gcttcttaaaacggtttcggaacatcgtgccactgcgtcttgccacaagggcagactgat 2450

                     
Query: 454  ttctcttca 462
            | |||||||
Sbjct: 2449 tcctcttca 2441

>gb|BT017575.1| Zea mays clone EL01N0427E12.c mRNA sequence
          Length = 899

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 63/74 (85%)
 Strand = Plus / Minus

                                                                       
Query: 344 aaccctgccaccaaagaggtccttgccgagcctccccttgaaggggaactgcttcttgaa 403
           |||||| || |||||||| ||||| |||| |||| | |||||||||||||| ||||||||
Sbjct: 530 aaccctaccgccaaagagctccttcccgatcctcgctttgaaggggaactgtttcttgaa 471

                         
Query: 404 acggttccggaaca 417
            || || |||||||
Sbjct: 470 gcgattgcggaaca 457

>gb|AC113415.3| Homo sapiens chromosome 5 clone RP11-55N10, complete sequence
          Length = 170798

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 336   ttcctgaaaaccctgccaccaa 357
             ||||||||||||||||||||||
Sbjct: 10299 ttcctgaaaaccctgccaccaa 10320

>gb|AC126751.2| Homo sapiens chromosome 5 clone CTD-2224K20, complete sequence
          Length = 120658

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 336   ttcctgaaaaccctgccaccaa 357
             ||||||||||||||||||||||
Sbjct: 94411 ttcctgaaaaccctgccaccaa 94432

>gb|CP000150.1| Burkholderia sp. 383 chromosome 3, complete sequence
          Length = 1395069

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 446     agactgatttctcttcagcgc 466
               |||||||||||||||||||||
Sbjct: 1138899 agactgatttctcttcagcgc 1138919

>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome
          Length = 2584158

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 277     ctgctggcggctgacgacggt 297
               |||||||||||||||||||||
Sbjct: 1943404 ctgctggcggctgacgacggt 1943384

>gb|AC154314.2| Mus musculus BAC clone RP23-347J22 from chromosome 13, complete sequence
          Length = 189556

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 344    aaccctgccaccaaagaggt 363
              ||||||||||||||||||||
Sbjct: 150653 aaccctgccaccaaagaggt 150672

>emb|AL021489.1|CEY44A6C Caenorhabditis elegans YAC Y44A6C, complete sequence
          Length = 14347

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 160  catctactacagatttggac 179
            ||||||||||||||||||||
Sbjct: 5344 catctactacagatttggac 5363

>gb|AY437479.1| Leishmania major MP63 gene, complete cds
          Length = 1872

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 416 cagcgagccgctgcgcgctg 435
           ||||||||||||||||||||
Sbjct: 41  cagcgagccgctgcgcgctg 60

>ref|NM_075598.2| Caenorhabditis elegans Y44A6C.1 (Y44A6C.1) mRNA, complete cds
          Length = 1223

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 160 catctactacagatttggac 179
           ||||||||||||||||||||
Sbjct: 77  catctactacagatttggac 96

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 200     cggcggcgcggcacaatataggggcggc 227
               |||||||||||||||  |||||||||||
Sbjct: 8885312 cggcggcgcggcacaggataggggcggc 8885339

>dbj|AP003859.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1033_B09
          Length = 120648

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 200   cggcggcgcggcacaatataggggcggc 227
             |||||||||||||||  |||||||||||
Sbjct: 68955 cggcggcgcggcacaggataggggcggc 68982

>emb|AL671897.6| Mouse DNA sequence from clone RP23-250A14 on chromosome X, complete
             sequence
          Length = 105208

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 336   ttcctgaaaaccctgccacc 355
             ||||||||||||||||||||
Sbjct: 27751 ttcctgaaaaccctgccacc 27732

>emb|AL591222.2|HS378I6 Homo sapiens chromosome 9 BAC RP11-378I6, complete sequence
          Length = 147211

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 83    tcgaatcaaaacaaacaagc 102
             ||||||||||||||||||||
Sbjct: 46237 tcgaatcaaaacaaacaagc 46256


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,303,778
Number of Sequences: 3902068
Number of extensions: 4303778
Number of successful extensions: 64745
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 64611
Number of HSP's gapped (non-prelim): 129
length of query: 479
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 457
effective length of database: 17,147,199,772
effective search space: 7836270295804
effective search space used: 7836270295804
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)