>ref|XM_482035.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1437

 Score = 89.7 bits (45), Expect = 8e-15
 Identities = 60/65 (92%)
 Strand = Plus / Minus

                                                                        
Query: 72   ccatgaaagccatagggtactctttgtggcaatgttattttagcaactggcccactctca 131
            |||||||||||||||||||||||||||||||||||||| ||||||| ||| ||| | |||
Sbjct: 1400 ccatgaaagccatagggtactctttgtggcaatgttatcttagcaattggtccattttca 1341

                 
Query: 132  aatct 136
            |||||
Sbjct: 1340 aatct 1336



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 49/54 (90%)
 Strand = Plus / Minus

                                                                  
Query: 329  aagatatagttttgcaaaacctccaaactttggtctcactgttccacaaccacc 382
            ||||| ||||||||| ||||||||||| ||||||| |||||||||||| |||||
Sbjct: 1299 aagatgtagttttgcgaaacctccaaattttggtcgcactgttccacagccacc 1246

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 89.7 bits (45), Expect = 8e-15
 Identities = 60/65 (92%)
 Strand = Plus / Plus

                                                                            
Query: 72       ccatgaaagccatagggtactctttgtggcaatgttattttagcaactggcccactctca 131
                |||||||||||||||||||||||||||||||||||||| ||||||| ||| ||| | |||
Sbjct: 17331571 ccatgaaagccatagggtactctttgtggcaatgttatcttagcaattggtccattttca 17331630

                     
Query: 132      aatct 136
                |||||
Sbjct: 17331631 aatct 17331635



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 40/44 (90%)
 Strand = Plus / Plus

                                                            
Query: 66       aatgctccatgaaagccatagggtactctttgtggcaatgttat 109
                ||||||||||| || |||||||||||||||||||| ||| ||||
Sbjct: 17221944 aatgctccatgcaaaccatagggtactctttgtggtaatattat 17221987



 Score = 48.1 bits (24), Expect = 0.027
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                        
Query: 329      aagatatagttttgcaaaacctccaaactttggtctcact 368
                ||||| ||||||||| ||||||||||| ||||||| ||||
Sbjct: 17332303 aagatgtagttttgcgaaacctccaaattttggtcgcact 17332342



 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 247      ctcctgagcagaattgattt 266
                ||||||||||||||||||||
Sbjct: 17222470 ctcctgagcagaattgattt 17222489

>dbj|AP004647.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1267_E11
          Length = 117073

 Score = 89.7 bits (45), Expect = 8e-15
 Identities = 60/65 (92%)
 Strand = Plus / Plus

                                                                         
Query: 72    ccatgaaagccatagggtactctttgtggcaatgttattttagcaactggcccactctca 131
             |||||||||||||||||||||||||||||||||||||| ||||||| ||| ||| | |||
Sbjct: 15195 ccatgaaagccatagggtactctttgtggcaatgttatcttagcaattggtccattttca 15254

                  
Query: 132   aatct 136
             |||||
Sbjct: 15255 aatct 15259



 Score = 48.1 bits (24), Expect = 0.027
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                     
Query: 329   aagatatagttttgcaaaacctccaaactttggtctcact 368
             ||||| ||||||||| ||||||||||| ||||||| ||||
Sbjct: 15927 aagatgtagttttgcgaaacctccaaattttggtcgcact 15966

>ref|XM_482019.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1992

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 122/152 (80%)
 Strand = Plus / Minus

                                                                        
Query: 66   aatgctccatgaaagccatagggtactctttgtggcaatgttattttagcaactggccca 125
            ||||||||||| || |||||||||||||||||||| ||| |||| || || |  ||  ||
Sbjct: 1973 aatgctccatgcaaaccatagggtactctttgtggtaatattatcttggctataggttca 1914

                                                                        
Query: 126  ctctcaaatcttcgtgcgtcgataatatgtgcctgtgatatatttgtgccctcatcgtgc 185
            ||||||||  |||| ||||| || || ||| | | ||||||||| ||  ||||||| || 
Sbjct: 1913 ctctcaaagtttcgggcgtcaatgatgtgtacttttgatatattggtttcctcatcatga 1854

                                            
Query: 186  acaaaagagattatccatccatcatcctcatg 217
            ||||| || | |||||| |||||||| |||||
Sbjct: 1853 acaaatgaaactatccagccatcatcttcatg 1822



 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 247  ctcctgagcagaattgattt 266
            ||||||||||||||||||||
Sbjct: 1792 ctcctgagcagaattgattt 1773

>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
               sequence
          Length = 22696651

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 33/34 (97%)
 Strand = Plus / Plus

                                                 
Query: 71      tccatgaaagccatagggtactctttgtggcaat 104
               ||||||||| ||||||||||||||||||||||||
Sbjct: 9198399 tccatgaaaaccatagggtactctttgtggcaat 9198432

>dbj|AP005684.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1742_G01
          Length = 154912

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 33/34 (97%)
 Strand = Plus / Plus

                                               
Query: 71    tccatgaaagccatagggtactctttgtggcaat 104
             ||||||||| ||||||||||||||||||||||||
Sbjct: 23690 tccatgaaaaccatagggtactctttgtggcaat 23723

>dbj|AP005389.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OSJNBa0091C18
          Length = 154416

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 40/44 (90%)
 Strand = Plus / Plus

                                                          
Query: 66     aatgctccatgaaagccatagggtactctttgtggcaatgttat 109
              ||||||||||| || |||||||||||||||||||| ||| ||||
Sbjct: 145799 aatgctccatgcaaaccatagggtactctttgtggtaatattat 145842



 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 247    ctcctgagcagaattgattt 266
              ||||||||||||||||||||
Sbjct: 146325 ctcctgagcagaattgattt 146344

>dbj|AP005298.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1770_H03
          Length = 189893

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 40/44 (90%)
 Strand = Plus / Plus

                                                         
Query: 66    aatgctccatgaaagccatagggtactctttgtggcaatgttat 109
             ||||||||||| || |||||||||||||||||||| ||| ||||
Sbjct: 82569 aatgctccatgcaaaccatagggtactctttgtggtaatattat 82612



 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 247   ctcctgagcagaattgattt 266
             ||||||||||||||||||||
Sbjct: 83095 ctcctgagcagaattgattt 83114

>gb|AC006692.2| Caenorhabditis elegans cosmid T28F12, complete sequence
          Length = 51851

 Score = 48.1 bits (24), Expect = 0.027
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                         
Query: 34    gctatgtttgctttcattaagtttttga 61
             ||||||||| ||||||||||||||||||
Sbjct: 14548 gctatgttttctttcattaagtttttga 14521

>gb|AC123662.13| Mus musculus chromosome 5, clone RP23-213N8, complete sequence
          Length = 223267

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 199    tccatccatcatcctcatgtag 220
              ||||||||||||||||||||||
Sbjct: 128178 tccatccatcatcctcatgtag 128199

>gb|CP000109.1| Thiomicrospira crunogena XCL-2, complete genome
          Length = 2427734

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 315     ttgatttcttggtcaagatat 335
               |||||||||||||||||||||
Sbjct: 1818759 ttgatttcttggtcaagatat 1818779

>emb|CR354424.7| Zebrafish DNA sequence from clone CH211-125L9 in linkage group 24,
             complete sequence
          Length = 156999

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 46    ttcattaagtttttgagacaa 66
             |||||||||||||||||||||
Sbjct: 39866 ttcattaagtttttgagacaa 39846

>gb|AC024775.1| Caenorhabditis elegans cosmid Y41D4A, complete sequence
          Length = 58069

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 34    gctatgtttgctttcattaagttt 57
             ||||||||| ||||||||||||||
Sbjct: 53776 gctatgttttctttcattaagttt 53753

>gb|CP000082.1| Psychrobacter arcticus 273-4, complete genome
          Length = 2650701

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 316     tgatttcttggtcaagatat 335
               ||||||||||||||||||||
Sbjct: 2465424 tgatttcttggtcaagatat 2465443

>gb|AC146162.2| Pan troglodytes BAC clone RP43-23P8 from 7, complete sequence
          Length = 183434

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 48     cattaagtttttgagacaaa 67
              ||||||||||||||||||||
Sbjct: 178465 cattaagtttttgagacaaa 178446

>gb|AC092610.1| Homo sapiens BAC clone RP11-160E17 from 7, complete sequence
          Length = 162018

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 48     cattaagtttttgagacaaa 67
              ||||||||||||||||||||
Sbjct: 140018 cattaagtttttgagacaaa 139999

>gb|AC145939.3| Pan troglodytes BAC clone RP43-18N13 from 7, complete sequence
          Length = 187077

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 48   cattaagtttttgagacaaa 67
            ||||||||||||||||||||
Sbjct: 8577 cattaagtttttgagacaaa 8596

>gb|AC023240.9| Oryza sativa chromosome 10 BAC OSJNBa0051D19 genomic sequence, complete
             sequence
          Length = 131984

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 286   ccacatggattgaatctcca 305
             ||||||||||||||||||||
Sbjct: 27810 ccacatggattgaatctcca 27829

>emb|CR391997.9| Zebrafish DNA sequence from clone CH211-236G14 in linkage group 17,
             complete sequence
          Length = 163437

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 244   ttgctcctgagcagaattga 263
             ||||||||||||||||||||
Sbjct: 33251 ttgctcctgagcagaattga 33270

>gb|AC090707.16| Homo sapiens chromosome 11, clone RP11-701I24, complete sequence
          Length = 185029

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 42    tgctttcattaagtttttga 61
             ||||||||||||||||||||
Sbjct: 18413 tgctttcattaagtttttga 18394

>gb|AC112662.7| Mus musculus chromosome 5, clone RP23-467F2, complete sequence
          Length = 200679

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 155   tgcctgtgatatatttgtgc 174
             ||||||||||||||||||||
Sbjct: 79908 tgcctgtgatatatttgtgc 79889

>gb|AC055782.9| Homo sapiens chromosome 15, clone RP11-528P19, complete sequence
          Length = 172697

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 317   gatttcttggtcaagatata 336
             ||||||||||||||||||||
Sbjct: 25765 gatttcttggtcaagatata 25746

>gb|AC022254.11| Homo sapiens chromosome 15, clone RP11-282M16, complete sequence
          Length = 188601

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 317   gatttcttggtcaagatata 336
             ||||||||||||||||||||
Sbjct: 88484 gatttcttggtcaagatata 88503

>gb|AC104471.6| Homo sapiens 3 BAC RP11-80B17 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 160698

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 156   gcctgtgatatatttgtgcc 175
             ||||||||||||||||||||
Sbjct: 30114 gcctgtgatatatttgtgcc 30133

>gb|AF036695.2| Caenorhabditis elegans cosmid F16B3, complete sequence
          Length = 36818

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 34    gctatgtttgctttcattaagttt 57
             ||||||||| ||||||||||||||
Sbjct: 21343 gctatgttttctttcattaagttt 21366

>gb|AC018608.9|AC018608 Homo sapiens chromosome 8, clone RP11-403P13, complete sequence
          Length = 200863

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 338   ttttgcaaaacctccaaact 357
             ||||||||||||||||||||
Sbjct: 73187 ttttgcaaaacctccaaact 73168

>emb|BX511232.6| Zebrafish DNA sequence from clone CH211-11K18 in linkage group 3,
             complete sequence
          Length = 171843

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 328   caagatatagttttgcaaaa 347
             ||||||||||||||||||||
Sbjct: 71439 caagatatagttttgcaaaa 71458

>emb|BX324232.7| Zebrafish DNA sequence from clone DKEY-220B14 in linkage group 12,
            complete sequence
          Length = 95455

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 240  aaaattgctcctgagcagaattga 263
            |||| |||||||||||||||||||
Sbjct: 1041 aaaactgctcctgagcagaattga 1018

>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 286      ccacatggattgaatctcca 305
                ||||||||||||||||||||
Sbjct: 18185318 ccacatggattgaatctcca 18185299

>gb|AC156394.6| Mus musculus 6 BAC RP24-314D22 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 171323

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 160    gtgatatatttgtgccctca 179
              ||||||||||||||||||||
Sbjct: 147710 gtgatatatttgtgccctca 147729

>gb|AC153575.5| Mus musculus 6 BAC RP23-157O3 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 215023

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 160   gtgatatatttgtgccctca 179
             ||||||||||||||||||||
Sbjct: 18712 gtgatatatttgtgccctca 18731

>gb|AC108039.4| Homo sapiens BAC clone RP11-210C5 from 2, complete sequence
          Length = 168612

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 7     ctacaggtaatttacactta 26
             ||||||||||||||||||||
Sbjct: 49001 ctacaggtaatttacactta 49020

>dbj|AP002372.4| Homo sapiens genomic DNA, chromosome 11 clone:RP11-203C2, complete
              sequence
          Length = 145255

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 343    caaaacctccaaactttggt 362
              ||||||||||||||||||||
Sbjct: 124788 caaaacctccaaactttggt 124769

>dbj|AP003383.2| Homo sapiens genomic DNA, chromosome 11q clone:RP11-21G19, complete
             sequences
          Length = 157533

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 343   caaaacctccaaactttggt 362
             ||||||||||||||||||||
Sbjct: 56815 caaaacctccaaactttggt 56796

>gb|AC146130.4| Pan troglodytes BAC clone RP43-4F10 from chromosome 7, complete
             sequence
          Length = 204322

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 48    cattaagtttttgagacaaa 67
             ||||||||||||||||||||
Sbjct: 50677 cattaagtttttgagacaaa 50696

>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 286      ccacatggattgaatctcca 305
                ||||||||||||||||||||
Sbjct: 18194571 ccacatggattgaatctcca 18194552

>dbj|AP006674.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT30L06, TM0369c,
            complete sequence
          Length = 68065

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 334  atagttttgcaaaacctccaaact 357
            |||||||||||||||||| |||||
Sbjct: 3707 atagttttgcaaaacctcaaaact 3730

>gb|AC010173.27| Homo sapiens 12 BAC RP11-977B10 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 98085

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 323   ttggtcaagatatagttttg 342
             ||||||||||||||||||||
Sbjct: 18552 ttggtcaagatatagttttg 18533


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,030,331
Number of Sequences: 3902068
Number of extensions: 5030331
Number of successful extensions: 85140
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 84952
Number of HSP's gapped (non-prelim): 188
length of query: 483
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 461
effective length of database: 17,147,199,772
effective search space: 7904859094892
effective search space used: 7904859094892
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)