ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd2n14
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1gb|AY943294.1| Hordeum vulgare subsp. vulgare clone BAC 673I14, ... 60 9e-06
2gb|AY146588.1| Triticum monococcum BAC clone 453N11, complete se... 52 0.002
3gb|AY146587.1| Triticum turgidum subsp. durum BAC 107G22, comple... 52 0.002
4gb|AY613782.1| Aegilops tauschii isolate TA2468 clone 2 HCBT-lik... 52 0.002
5gb|AF446141.1| Aegilops tauschii LZ-NBS-LRR class RGA, NBS-LRR c... 52 0.002
6emb|AJ563452.1|TAE563452 Triticum aestivum agp2 gene for ADP-glu... 52 0.002
7gb|AY485643.1| Hordeum vulgare subsp. vulgare BAC 615K1, complet... 50 0.009
8gb|AF509767.1| Hordeum vulgare subsp. vulgare isolate NRG021 Rpg... 50 0.009
9gb|AF325197.1|AF325197 Triticum aestivum LRK33 (Lrk33) and TAK33... 50 0.009
10dbj|AB058924.1| Hordeum vulgare gene for protein kinase HvPKABA1... 48 0.036
11gb|AF509748.1| Hordeum vulgare subsp. vulgare Morex barley stem ... 46 0.14
12emb|AL845352.7| Mouse DNA sequence from clone RP23-29A7 on chrom... 44 0.56
13emb|CR626934.1| Triticum aestivum 42 2.2
14gb|AC117199.3| Mus musculus BAC clone RP23-134L22 from 10, compl... 42 2.2
15gb|AC162908.4| Mus musculus BAC clone RP24-296A15 from chromosom... 42 2.2
16gb|AC010347.4| Homo sapiens chromosome 5 clone CTD-2018C9, compl... 42 2.2
17dbj|AB073930.1| Thermoanaerobacter brockii treP gene for trehalo... 42 2.2
18gb|AY485644.1| Triticum monococcum phosphatidylserine decarboxyl... 40 8.7
19ref|NM_015117.1| Homo sapiens zinc finger CCCH-type containing 3... 40 8.7
20emb|CT009577.5| Mouse DNA sequence from clone RP23-24C24 on chro... 40 8.7
21gb|AC124196.4| Mus musculus BAC clone RP23-296L12 from chromosom... 40 8.7
22gb|AC127292.4| Mus musculus BAC clone RP23-375J3 from chromosome... 40 8.7
23emb|X52103.1|TAEMG T.aestivum Em gene 40 8.7
24emb|CR723903.2|CNS0GLID Tetraodon nigroviridis full-length cDNA 40 8.7
25emb|CR721310.2|CNS0GJIC Tetraodon nigroviridis full-length cDNA 40 8.7
26emb|CR718373.2|CNS0GH8R Tetraodon nigroviridis full-length cDNA 40 8.7
27emb|CR679853.2|CNS0FNIX Tetraodon nigroviridis full-length cDNA 40 8.7
28gb|AC163650.2| Mus musculus BAC clone RP24-383A20 from chromosom... 40 8.7
29emb|CR647884.2|CNS0EYVM Tetraodon nigroviridis full-length cDNA 40 8.7
30gb|AF528749.1| Uranoscodon superciliosus NADH dehydrogenase subu... 40 8.7
31emb|CR352340.10| Zebrafish DNA sequence from clone CH211-191L23 ... 40 8.7
32emb|CR382126.1| Kluyveromyces lactis strain NRRL Y-1140 chromoso... 40 8.7
33gb|AC159895.2| Mus musculus BAC clone RP23-260J19 from chromosom... 40 8.7
34gb|BC038670.1| Homo sapiens zinc finger CCCH-type containing 3, ... 40 8.7
35emb|AL603842.9| Mouse DNA sequence from clone RP23-100P23 on chr... 40 8.7
36gb|AC093430.3| Homo sapiens chromosome 1 clone RP11-171B15, comp... 40 8.7
37dbj|D63484.1| Homo sapiens mRNA for KIAA0150 gene, partial cds 40 8.7
38gb|AC023281.13| Homo sapiens 12p BAC RP11-780A5 (Roswell Park Ca... 40 8.7
39emb|BX548068.13| Zebrafish DNA sequence from clone DKEYP-53E7 in... 40 8.7
40gb|AC091108.5| Homo sapiens chromosome 18, clone RP11-765H19, co... 40 8.7
41gb|AC154736.2| Mus musculus BAC clone RP24-389J14 from chromosom... 40 8.7
42gb|BC034435.1| Homo sapiens zinc finger CCCH-type containing 3, ... 40 8.7
43gb|AC102391.12| Mus musculus chromosome 18, clone RP24-62K22, co... 40 8.7
44emb|BX005336.10| Zebrafish DNA sequence from clone DKEY-85K7 in ... 40 8.7
45gb|AC105118.23| Homo sapiens chromosome 8, clone RP11-909N17, co... 40 8.7
46ref|XM_221016.2| PREDICTED: Rattus norvegicus wingless-type MMTV... 40 8.7
47ref|XM_560172.1| Anopheles gambiae str. PEST ENSANGP00000029630 ... 40 8.7
48ref|XM_309145.2| Anopheles gambiae str. PEST ENSANGP00000025319 ... 40 8.7
49ref|XM_309146.2| Anopheles gambiae str. PEST ENSANGP00000018618 ... 40 8.7
50emb|BX284111.7| Mouse DNA sequence from clone RP23-217B8 on chro... 40 8.7
51emb|AL683816.6| Mouse DNA sequence from clone RP23-120E8 on chro... 40 8.7
52gb|BC001974.1| Homo sapiens cDNA clone IMAGE:3457069, partial cds 40 8.7

>gb|AY943294.1| Hordeum vulgare subsp. vulgare clone BAC 673I14, complete sequence
          Length = 108608

 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 51/58 (87%)
 Strand = Plus / Minus

                                                                       
Query: 33    gcttggatccgtacatggtcgttactcacgtctgcggagtccagggagcgtttggtta 90
             |||| ||||||||||||||| ||||||||  |||||||  ||||||||| ||||||||
Sbjct: 15697 gctttgatccgtacatggtcattactcactcctgcggaaaccagggagcctttggtta 15640



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>gb|AY146588.1| Triticum monococcum BAC clone 453N11, complete sequence
          Length = 285444

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                    
Query: 83     tttggttactggatgcaaccggtgagagacggcagcac 120
              |||||||||||| ||||||||||| ||||||| |||||
Sbjct: 243799 tttggttactgggtgcaaccggtgggagacggtagcac 243762



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>gb|AY146587.1| Triticum turgidum subsp. durum BAC 107G22, complete sequence
          Length = 142018

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 59/70 (84%)
 Strand = Plus / Plus

                                                                         
Query: 33    gcttggatccgtacatggtcgttactcacgtctgcggagtccagggagcgtttggttact 92
             |||||||||||||| ||| | ||||||||  ||  ||| |||||||||| |||| |||||
Sbjct: 88128 gcttggatccgtacgtggcccttactcactcctatggactccagggagcctttgattact 88187

                       
Query: 93    ggatgcaacc 102
             || |||||||
Sbjct: 88188 gggtgcaacc 88197



 Score = 46.1 bits (23), Expect = 0.14
 Identities = 35/39 (89%)
 Strand = Plus / Plus

                                                    
Query: 296   ataaaatggctgcatgcatcaccacgatgcagaggccgg 334
             |||||| ||| |||||||||| || ||||||||||||||
Sbjct: 88397 ataaaagggccgcatgcatcatcatgatgcagaggccgg 88435



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>gb|AY613782.1| Aegilops tauschii isolate TA2468 clone 2 HCBT-like putative PR
           gene, partial cds
          Length = 6062

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                     
Query: 32  tgcttggatccgtacatggtcgttac 57
           ||||||||||||||||||||||||||
Sbjct: 567 tgcttggatccgtacatggtcgttac 592



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 70/85 (82%)
 Strand = Plus / Minus

                                                                       
Query: 36  tggatccgtacatggtcgttactcacgtctgcggagtccagggagcgtttggttactgga 95
           ||||||||||| ||||| ||||||||  ||   || || ||||||| |||||||||||| 
Sbjct: 121 tggatccgtacgtggtccttactcactcctatagactctagggagcctttggttactggg 62

                                    
Query: 96  tgcaaccggtgagagacggcagcac 120
           ||||||| ||| |||| || |||||
Sbjct: 61  tgcaaccagtgggagatggtagcac 37



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>gb|AF446141.1| Aegilops tauschii LZ-NBS-LRR class RGA, NBS-LRR class RGA, HCBT-like
             putative defense response protein, and putative alliin
             lyase genes, complete cds; and unknown genes
          Length = 106618

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                       
Query: 32    tgcttggatccgtacatggtcgttac 57
             ||||||||||||||||||||||||||
Sbjct: 38933 tgcttggatccgtacatggtcgttac 38958



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 70/85 (82%)
 Strand = Plus / Minus

                                                                         
Query: 36    tggatccgtacatggtcgttactcacgtctgcggagtccagggagcgtttggttactgga 95
             ||||||||||| ||||| ||||||||  ||   || || ||||||| |||||||||||| 
Sbjct: 38488 tggatccgtacgtggtccttactcactcctatagactctagggagcctttggttactggg 38429

                                      
Query: 96    tgcaaccggtgagagacggcagcac 120
             ||||||| ||| |||| || |||||
Sbjct: 38428 tgcaaccagtgggagatggtagcac 38404



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>emb|AJ563452.1|TAE563452 Triticum aestivum agp2 gene for ADP-glucose pyrophosphorylase large
           subunit
          Length = 7725

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 29/30 (96%)
 Strand = Plus / Minus

                                         
Query: 67  cggagtccagggagcgtttggttactggat 96
           ||||| ||||||||||||||||||||||||
Sbjct: 352 cggaggccagggagcgtttggttactggat 323



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>gb|AY485643.1| Hordeum vulgare subsp. vulgare BAC 615K1, complete sequence
          Length = 114996

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 49/57 (85%)
 Strand = Plus / Plus

                                                                      
Query: 38    gatccgtacatggtcgttactcacgtctgcggagtccagggagcgtttggttactgg 94
             ||||| ||||||||| ||||||||  |||||||   |||||||| ||||||||||||
Sbjct: 59197 gatccatacatggtcattactcactcctgcggaaatcagggagcctttggttactgg 59253



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>gb|AF509767.1| Hordeum vulgare subsp. vulgare isolate NRG021 Rpg1 region, genomic
            sequence
          Length = 2112

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 46/53 (86%)
 Strand = Plus / Minus

                                                                 
Query: 42   cgtacatggtcgttactcacgtctgcggagtccagggagcgtttggttactgg 94
            ||||||||||||||||||||  ||||||   | ||||||| ||||||||||||
Sbjct: 1352 cgtacatggtcgttactcactcctgcggcaactagggagcctttggttactgg 1300



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>gb|AF325197.1|AF325197 Triticum aestivum LRK33 (Lrk33) and TAK33 (Tak33) genes, complete cds
          Length = 20754

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                         
Query: 68   ggagtccagggagcgtttggttactggat 96
            |||| ||||||||||||||||||||||||
Sbjct: 2797 ggaggccagggagcgtttggttactggat 2825



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>dbj|AB058924.1| Hordeum vulgare gene for protein kinase HvPKABA1, complete cds,
            cultivar:Igri
          Length = 11684

 Score = 48.1 bits (24), Expect = 0.036
 Identities = 48/56 (85%)
 Strand = Plus / Minus

                                                                    
Query: 38   gatccgtacatggtcgttactcacgtctgcggagtccagggagcgtttggttactg 93
            |||||||||| |||||||||||||  | ||||   ||||||||| |||||||||||
Sbjct: 4692 gatccgtacacggtcgttactcactcccgcggcaaccagggagcttttggttactg 4637



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>gb|AF509748.1| Hordeum vulgare subsp. vulgare Morex barley stem rust resistance
            protein (Rpg1) gene, complete cds
          Length = 17974

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                   
Query: 296  ataaaatggctgcatgcatcaccacgatgcagaggccgg 334
            ||||||||||||||||||||  |  ||||||||||||||
Sbjct: 5272 ataaaatggctgcatgcatcttccagatgcagaggccgg 5234



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 38   gatccgtacatggtcgttact 58
            |||||||||||||||||||||
Sbjct: 1282 gatccgtacatggtcgttact 1262



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>emb|AL845352.7| Mouse DNA sequence from clone RP23-29A7 on chromosome 2, complete
             sequence
          Length = 196996

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 437   tttactatttccttgctgtctc 458
             ||||||||||||||||||||||
Sbjct: 14395 tttactatttccttgctgtctc 14374



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>emb|CR626934.1| Triticum aestivum
          Length = 94398

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 49/57 (85%), Gaps = 1/57 (1%)
 Strand = Plus / Plus

                                                                      
Query: 296   ataaaatggctgcatgcatcaccacgatgcagaggccggagctc-tcctccttttct 351
             |||||||||| | ||||||| ||  |||||||||||||| | || ||||||||||||
Sbjct: 45795 ataaaatggccgtatgcatctcccagatgcagaggccgggggtcatcctccttttct 45851



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>gb|AC117199.3| Mus musculus BAC clone RP23-134L22 from 10, complete sequence
          Length = 210514

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 567    aactaagatgcagtgctacaa 587
              |||||||||||||||||||||
Sbjct: 104810 aactaagatgcagtgctacaa 104790



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>gb|AC162908.4| Mus musculus BAC clone RP24-296A15 from chromosome 10, complete sequence
          Length = 170988

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 567    aactaagatgcagtgctacaa 587
              |||||||||||||||||||||
Sbjct: 159254 aactaagatgcagtgctacaa 159234



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>gb|AC010347.4| Homo sapiens chromosome 5 clone CTD-2018C9, complete sequence
          Length = 146638

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 181   gtctgagattgatatggccaa 201
             |||||||||||||||||||||
Sbjct: 67599 gtctgagattgatatggccaa 67579



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>dbj|AB073930.1| Thermoanaerobacter brockii treP gene for trehalose phosphorylase,
            complete cds
          Length = 3345

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 245  gcctttgtgttccagttgaac 265
            |||||||||||||||||||||
Sbjct: 3115 gcctttgtgttccagttgaac 3135



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>gb|AY485644.1| Triticum monococcum phosphatidylserine decarboxylase, ZCCT2, ZCCT1, and
              SNF2P genes, complete cds; nucellin pseudogene, complete
              sequence; putative transposase, phosphatidylinositol
              phosphatidylcholine transfer protein sec14 cytosolic-like
              protein, and phytochrome P450-like protein genes, complete
              cds; and unknown genes
          Length = 438828

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 67     cggagtccagggagcgtttggttactgg 94
              ||||| ||||||||| ||||||||||||
Sbjct: 184469 cggaggccagggagcatttggttactgg 184442



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>ref|NM_015117.1| Homo sapiens zinc finger CCCH-type containing 3 (ZC3H3), mRNA
          Length = 3268

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 375  tggtcatggaaggttgaggg 394
            ||||||||||||||||||||
Sbjct: 3023 tggtcatggaaggttgaggg 3004



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>emb|CT009577.5| Mouse DNA sequence from clone RP23-24C24 on chromosome 16, complete
              sequence
          Length = 258862

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 330    gccggagctctcctcctttt 349
              ||||||||||||||||||||
Sbjct: 171050 gccggagctctcctcctttt 171069



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>gb|AC124196.4| Mus musculus BAC clone RP23-296L12 from chromosome 13, complete sequence
          Length = 193553

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 189    ttgatatggccaagatatggccaa 212
              ||||||||||||| ||||||||||
Sbjct: 118451 ttgatatggccaatatatggccaa 118428



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>gb|AC127292.4| Mus musculus BAC clone RP23-375J3 from chromosome 9, complete sequence
          Length = 157088

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 139   tggatgacagcaaactaaca 158
             ||||||||||||||||||||
Sbjct: 14773 tggatgacagcaaactaaca 14792



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>emb|X52103.1|TAEMG T.aestivum Em gene
          Length = 2465

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 296 ataaaatggctgcatgcatc 315
           ||||||||||||||||||||
Sbjct: 824 ataaaatggctgcatgcatc 843



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>emb|CR723903.2|CNS0GLID Tetraodon nigroviridis full-length cDNA
          Length = 826

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 247 ctttgtgttccagttgaacc 266
           ||||||||||||||||||||
Sbjct: 620 ctttgtgttccagttgaacc 601



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>emb|CR721310.2|CNS0GJIC Tetraodon nigroviridis full-length cDNA
          Length = 857

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 247 ctttgtgttccagttgaacc 266
           ||||||||||||||||||||
Sbjct: 646 ctttgtgttccagttgaacc 627



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>emb|CR718373.2|CNS0GH8R Tetraodon nigroviridis full-length cDNA
          Length = 850

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 247 ctttgtgttccagttgaacc 266
           ||||||||||||||||||||
Sbjct: 646 ctttgtgttccagttgaacc 627



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>emb|CR679853.2|CNS0FNIX Tetraodon nigroviridis full-length cDNA
          Length = 827

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 247 ctttgtgttccagttgaacc 266
           ||||||||||||||||||||
Sbjct: 621 ctttgtgttccagttgaacc 602



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>gb|AC163650.2| Mus musculus BAC clone RP24-383A20 from chromosome 13, complete
             sequence
          Length = 210177

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 616   accttgaactctcaatctct 635
             ||||||||||||||||||||
Sbjct: 20137 accttgaactctcaatctct 20118



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>emb|CR647884.2|CNS0EYVM Tetraodon nigroviridis full-length cDNA
          Length = 824

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 247 ctttgtgttccagttgaacc 266
           ||||||||||||||||||||
Sbjct: 629 ctttgtgttccagttgaacc 610



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>gb|AF528749.1| Uranoscodon superciliosus NADH dehydrogenase subunit 1 (ND1) gene,
            partial cds; tRNA-Ile, tRNA-Gln, and tRNA-Met genes,
            complete sequence; NADH dehydrogenase subunit 2 (ND2)
            gene, complete cds; tRNA-Trp, tRNA-Ala, tRNA-Asn,
            tRNA-Cys, and tRNA-Tyr genes, complete sequence; and
            cytochrome c oxidase subunit I (COI) gene, partial cds;
            mitochondrial genes for mitochondrial products
          Length = 1737

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 481  ctaatcttaggagaactaattgcc 504
            |||||||||| |||||||||||||
Sbjct: 1086 ctaatcttagaagaactaattgcc 1109



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>emb|CR352340.10| Zebrafish DNA sequence from clone CH211-191L23 in linkage group 17,
             complete sequence
          Length = 145947

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 418   tgaataattcaactcttcat 437
             ||||||||||||||||||||
Sbjct: 84270 tgaataattcaactcttcat 84289



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>emb|CR382126.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome F of strain NRRL Y-1140
               of Kluyveromyces lactis
          Length = 2602197

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 546     tttgatatttgaaaacagtg 565
               ||||||||||||||||||||
Sbjct: 1980818 tttgatatttgaaaacagtg 1980799



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>gb|AC159895.2| Mus musculus BAC clone RP23-260J19 from chromosome 9, complete sequence
          Length = 191882

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 139    tggatgacagcaaactaaca 158
              ||||||||||||||||||||
Sbjct: 102844 tggatgacagcaaactaaca 102863



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>gb|BC038670.1| Homo sapiens zinc finger CCCH-type containing 3, mRNA (cDNA clone
            MGC:43116 IMAGE:5260824), complete cds
          Length = 3268

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 375  tggtcatggaaggttgaggg 394
            ||||||||||||||||||||
Sbjct: 3023 tggtcatggaaggttgaggg 3004



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>emb|AL603842.9| Mouse DNA sequence from clone RP23-100P23 on chromosome 11 Contains the
              5' end of a novel gene, three novel genes, the Slc6a4 gene
              for solute carrier family 6 (neurotransmitter transporter,
              serotonin) member 4, the Blmh gene for bleomycin hydrolase
              and three CpG islands, complete sequence
          Length = 229289

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 334    gagctctcctccttttcttc 353
              ||||||||||||||||||||
Sbjct: 113837 gagctctcctccttttcttc 113856



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>gb|AC093430.3| Homo sapiens chromosome 1 clone RP11-171B15, complete sequence
          Length = 153414

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 432    cttcatttactatttccttgctgt 455
              ||||||| ||||||||||||||||
Sbjct: 119276 cttcattcactatttccttgctgt 119253



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>dbj|D63484.1| Homo sapiens mRNA for KIAA0150 gene, partial cds
          Length = 3231

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 375  tggtcatggaaggttgaggg 394
            ||||||||||||||||||||
Sbjct: 3000 tggtcatggaaggttgaggg 2981



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>gb|AC023281.13| Homo sapiens 12p BAC RP11-780A5 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 145410

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 428   aactcttcatttactatttccttgctgt 455
             |||||||| ||| |||||||||||||||
Sbjct: 16388 aactcttcctttgctatttccttgctgt 16415



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>emb|BX548068.13| Zebrafish DNA sequence from clone DKEYP-53E7 in linkage group 10,
            complete sequence
          Length = 177449

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 272  ctttatttgaacttgtttgt 291
            ||||||||||||||||||||
Sbjct: 3945 ctttatttgaacttgtttgt 3926



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>gb|AC091108.5| Homo sapiens chromosome 18, clone RP11-765H19, complete sequence
          Length = 164790

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 492   agaactaattgccaagtgcctaat 515
             |||||||||||| |||||||||||
Sbjct: 48988 agaactaattgcaaagtgcctaat 49011



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>gb|AC154736.2| Mus musculus BAC clone RP24-389J14 from chromosome 16, complete
             sequence
          Length = 141092

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 330   gccggagctctcctcctttt 349
             ||||||||||||||||||||
Sbjct: 93967 gccggagctctcctcctttt 93986



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>gb|BC034435.1| Homo sapiens zinc finger CCCH-type containing 3, mRNA (cDNA clone
            IMAGE:5166541), complete cds
          Length = 1827

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 375  tggtcatggaaggttgaggg 394
            ||||||||||||||||||||
Sbjct: 1548 tggtcatggaaggttgaggg 1529



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>gb|AC102391.12| Mus musculus chromosome 18, clone RP24-62K22, complete sequence
          Length = 196455

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 440    actatttccttgctgtctct 459
              ||||||||||||||||||||
Sbjct: 106939 actatttccttgctgtctct 106958



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>emb|BX005336.10| Zebrafish DNA sequence from clone DKEY-85K7 in linkage group 7, complete
              sequence
          Length = 233826

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 560    acagtgcaactaagatgcag 579
              ||||||||||||||||||||
Sbjct: 110531 acagtgcaactaagatgcag 110550



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>gb|AC105118.23| Homo sapiens chromosome 8, clone RP11-909N17, complete sequence
          Length = 179941

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 375    tggtcatggaaggttgaggg 394
              ||||||||||||||||||||
Sbjct: 107873 tggtcatggaaggttgaggg 107892



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>ref|XM_221016.2| PREDICTED: Rattus norvegicus wingless-type MMTV integration site
           family, member 3 (Wnt3), mRNA
          Length = 2229

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 377 gtcatggaaggttgaggggt 396
           ||||||||||||||||||||
Sbjct: 278 gtcatggaaggttgaggggt 297



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>ref|XM_560172.1| Anopheles gambiae str. PEST ENSANGP00000029630
           (ENSANGG00000016129), partial mRNA
          Length = 627

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 571 aagatgcagtgctacaagattaaa 594
           |||||||||||| |||||||||||
Sbjct: 520 aagatgcagtgccacaagattaaa 543



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>ref|XM_309145.2| Anopheles gambiae str. PEST ENSANGP00000025319 (ENSANGG00000016129),
            partial mRNA
          Length = 1322

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 571  aagatgcagtgctacaagattaaa 594
            |||||||||||| |||||||||||
Sbjct: 1027 aagatgcagtgccacaagattaaa 1050



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>ref|XM_309146.2| Anopheles gambiae str. PEST ENSANGP00000018618 (ENSANGG00000016129),
            partial mRNA
          Length = 1451

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 571  aagatgcagtgctacaagattaaa 594
            |||||||||||| |||||||||||
Sbjct: 1156 aagatgcagtgccacaagattaaa 1179



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>emb|BX284111.7| Mouse DNA sequence from clone RP23-217B8 on chromosome X, complete
             sequence
          Length = 223318

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 178   atagtctgagattgatatgg 197
             ||||||||||||||||||||
Sbjct: 83462 atagtctgagattgatatgg 83443



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>emb|AL683816.6| Mouse DNA sequence from clone RP23-120E8 on chromosome 4, complete
             sequence
          Length = 216639

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 105   tgagagacggcagcacaaaccatg 128
             ||||| ||||||||||||||||||
Sbjct: 58272 tgagaaacggcagcacaaaccatg 58249



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>gb|BC001974.1| Homo sapiens cDNA clone IMAGE:3457069, partial cds
          Length = 2445

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 375  tggtcatggaaggttgaggg 394
            ||||||||||||||||||||
Sbjct: 1663 tggtcatggaaggttgaggg 1644


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,529,053
Number of Sequences: 3902068
Number of extensions: 5529053
Number of successful extensions: 109869
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 51
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 109753
Number of HSP's gapped (non-prelim): 114
length of query: 637
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 614
effective length of database: 17,143,297,704
effective search space: 10525984790256
effective search space used: 10525984790256
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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