ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd2n08 |
|---|---|
| Clone Library Name | barley_pub |
>YAA1_SCHPO (Q09795) Probable peptidase C22G7.01c (EC 3.4.-.-)| Length = 598 Score = 112 bits (279), Expect = 1e-24 Identities = 52/102 (50%), Positives = 69/102 (67%) Frame = -3 Query: 600 LQKGMIVSNEPGYYEDNSFGIRIENLLLVKEVNLANSFGGISYLGFEKLTFVPIQRKLID 421 LQ GM+ SNEPG+YED FG R+EN + + EVN N F G +YLG + LT P +KLID Sbjct: 497 LQAGMVTSNEPGFYEDGHFGYRVENCVYITEVNTENRFAGRTYLGLKDLTLAPHCQKLID 556 Query: 420 LPLLSPLEINWVNEYHEEVWEKVSPFLSGNPRNWLLDNTRPL 295 LLSP E+ ++NEYH EV+ +SP LS + + WL +T P+ Sbjct: 557 PSLLSPEEVKYLNEYHSEVYTTLSPMLSVSAKKWLSKHTSPI 598
>XPP1_RAT (O54975) Xaa-Pro aminopeptidase 1 (EC 3.4.11.9) (X-Pro| aminopeptidase 1) (X-prolyl aminopeptidase 1, soluble) (Cytosolic aminopeptidase P) (Soluble aminopeptidase P) (sAmp) (Aminoacylproline aminopeptidase) Length = 623 Score = 90.9 bits (224), Expect(2) = 1e-19 Identities = 47/106 (44%), Positives = 63/106 (59%), Gaps = 4/106 (3%) Frame = -3 Query: 600 LQKGMIVSNEPGYYEDNSFGIRIENLLLVKEVNLANSFGGISYLGFEKLTFVPIQRKLID 421 L+ GMIV++EPGYYED +FGIRIEN++LV +F L FE LT VPIQ K+ID Sbjct: 514 LEAGMIVTDEPGYYEDGAFGIRIENVVLVVPAKTKYNFNNRGSLTFEPLTLVPIQTKMID 573 Query: 420 LPLLSPLEINWVNEYHEEVWEKVSPFLSGNPR----NWLLDNTRPL 295 + L+ E +W+N YH+ + + L R WLL T P+ Sbjct: 574 VDALTDKECDWLNSYHQTCRDVIGKELQTQGRQEALEWLLRETEPI 619 Score = 25.4 bits (54), Expect(2) = 1e-19 Identities = 10/13 (76%), Positives = 11/13 (84%) Frame = -2 Query: 658 LNVHEGPQSISYR 620 LNVHEGP ISY+ Sbjct: 495 LNVHEGPCGISYK 507
>XPP1_MOUSE (Q6P1B1) Xaa-Pro aminopeptidase 1 (EC 3.4.11.9) (X-Pro| aminopeptidase 1) (X-prolyl aminopeptidase 1, soluble) (Cytosolic aminopeptidase P) (Soluble aminopeptidase P) (sAmp) (Aminoacylproline aminopeptidase) Length = 623 Score = 90.5 bits (223), Expect(2) = 1e-19 Identities = 47/106 (44%), Positives = 63/106 (59%), Gaps = 4/106 (3%) Frame = -3 Query: 600 LQKGMIVSNEPGYYEDNSFGIRIENLLLVKEVNLANSFGGISYLGFEKLTFVPIQRKLID 421 L+ GMIV++EPGYYED +FGIRIEN++LV +F L FE LT VPIQ K+ID Sbjct: 514 LEAGMIVTDEPGYYEDGAFGIRIENVVLVVPAKTKYNFNNRGSLTFEPLTLVPIQTKMID 573 Query: 420 LPLLSPLEINWVNEYHEEVWEKVSPFLSGNPR----NWLLDNTRPL 295 + L+ E +W+N YH+ + V L R WL+ T P+ Sbjct: 574 VNALTDKECDWLNSYHQTCRDVVGKELQSQGRQEALEWLIRETEPV 619 Score = 25.4 bits (54), Expect(2) = 1e-19 Identities = 10/13 (76%), Positives = 11/13 (84%) Frame = -2 Query: 658 LNVHEGPQSISYR 620 LNVHEGP ISY+ Sbjct: 495 LNVHEGPCGISYK 507
>XPP1_HUMAN (Q9NQW7) Xaa-Pro aminopeptidase 1 (EC 3.4.11.9) (X-Pro| aminopeptidase 1) (X-prolyl aminopeptidase 1, soluble) (Cytosolic aminopeptidase P) (Soluble aminopeptidase P) (sAmp) (Aminoacylproline aminopeptidase) Length = 622 Score = 89.7 bits (221), Expect(2) = 2e-19 Identities = 47/106 (44%), Positives = 64/106 (60%), Gaps = 4/106 (3%) Frame = -3 Query: 600 LQKGMIVSNEPGYYEDNSFGIRIENLLLVKEVNLANSFGGISYLGFEKLTFVPIQRKLID 421 L+ GMIV++EPGYYED +FGIRIEN++LV V +F L FE LT VPIQ K+ID Sbjct: 513 LEAGMIVTDEPGYYEDGAFGIRIENVVLVVPVKTKYNFNNRGSLTFEPLTLVPIQTKMID 572 Query: 420 LPLLSPLEINWVNEYHEEVWEKVSPFLSGNPR----NWLLDNTRPL 295 + L+ E +W+N YH + + L R WL+ T+P+ Sbjct: 573 VDSLTDKECDWLNNYHLTCRDVIGKELQKQGRQEALEWLIRETQPI 618 Score = 25.4 bits (54), Expect(2) = 2e-19 Identities = 10/13 (76%), Positives = 11/13 (84%) Frame = -2 Query: 658 LNVHEGPQSISYR 620 LNVHEGP ISY+ Sbjct: 494 LNVHEGPCGISYK 506
>XPP2_HUMAN (O43895) Xaa-Pro aminopeptidase 2 precursor (EC 3.4.11.9) (X-Pro| aminopeptidase 2) (Membrane-bound aminopeptidase P) (Membrane-bound APP) (Membrane-bound AmP) (mAmP) (Aminoacylproline aminopeptidase) Length = 674 Score = 85.9 bits (211), Expect = 1e-16 Identities = 48/107 (44%), Positives = 64/107 (59%), Gaps = 4/107 (3%) Frame = -3 Query: 603 ALQKGMIVSNEPGYYEDNSFGIRIENLLLVKEVNLANSFGGISYLGFEKLTFVPIQRKLI 424 A+ KGM S EPGYY+D FGIR+E++ LV E + G SYL FE ++FVP R LI Sbjct: 545 AMAKGMFTSIEPGYYKDGEFGIRLEDVALVVEAK--TKYPG-SYLTFEVVSFVPYDRNLI 601 Query: 423 DLPLLSPLEINWVNEYHEEVWEKVSPFLSGNPR----NWLLDNTRPL 295 D+ LLSP + ++N Y++ + EKV P L WL +T PL Sbjct: 602 DVSLLSPEHLQYLNRYYQTIREKVGPELQRRQLLEEFEWLQQHTEPL 648
>XPP_YEAST (Q07825) Putative Xaa-Pro aminopeptidase (EC 3.4.11.9)| Length = 749 Score = 80.5 bits (197), Expect(2) = 3e-16 Identities = 45/104 (43%), Positives = 59/104 (56%), Gaps = 2/104 (1%) Frame = -3 Query: 600 LQKGMIVSNEPGYYEDNSFGIRIENLLLVKEVNLANSFGGISYLGFEKLTFVPIQRKLID 421 L+ G I+SNEPGYY+D +GIRIE+ +L+K+ +F L FE +T VP RKLI+ Sbjct: 651 LRAGNIISNEPGYYKDGEYGIRIESDMLIKKATEKGNF-----LKFENMTVVPYCRKLIN 705 Query: 420 LPLLSPLEINWVNEYHEEVWEKVSPFLSGN--PRNWLLDNTRPL 295 LL+ E +NEYH VW + FL WL T PL Sbjct: 706 TKLLNEEEKTQINEYHARVWRTIVHFLQPQSISYKWLKRETSPL 749 Score = 24.3 bits (51), Expect(2) = 3e-16 Identities = 8/13 (61%), Positives = 10/13 (76%) Frame = -2 Query: 658 LNVHEGPQSISYR 620 LNVHEGP + +R Sbjct: 631 LNVHEGPMGVGFR 643
>XPP2_PIG (Q95333) Xaa-Pro aminopeptidase 2 precursor (EC 3.4.11.9) (X-Pro| aminopeptidase 2) (Membrane-bound aminopeptidase P) (Membrane-bound APP) (Membrane-bound AmP) (mAmP) (Aminoacylproline aminopeptidase) Length = 673 Score = 82.0 bits (201), Expect = 1e-15 Identities = 45/106 (42%), Positives = 65/106 (61%), Gaps = 4/106 (3%) Frame = -3 Query: 600 LQKGMIVSNEPGYYEDNSFGIRIENLLLVKEVNLANSFGGISYLGFEKLTFVPIQRKLID 421 + +GM S EPGYY+D FGIR+E++ LV E + G +YL FE ++ VP RKLID Sbjct: 545 MAEGMFTSIEPGYYQDGEFGIRLEDVALVVEAK--TKYPG-TYLTFEVVSLVPYDRKLID 601 Query: 420 LPLLSPLEINWVNEYHEEVWEKVSPFLSG----NPRNWLLDNTRPL 295 + LLSP ++ ++N Y++ + EKV P L +WL +T PL Sbjct: 602 VSLLSPEQLQYLNRYYQAIREKVGPELQRRGLLEELSWLQRHTEPL 647
>Y806_METJA (Q58216) Hypothetical peptidase MJ0806 (EC 3.4.-.-)| Length = 347 Score = 39.7 bits (91), Expect = 0.009 Identities = 22/50 (44%), Positives = 31/50 (62%) Frame = -3 Query: 600 LQKGMIVSNEPGYYEDNSFGIRIENLLLVKEVNLANSFGGISYLGFEKLT 451 L++GM+V+ EPG Y + FG+RIE+L LVK+ GFEKL+ Sbjct: 303 LKEGMVVTIEPGLYLKDKFGVRIEDLYLVKK------------NGFEKLS 340
>GCH1_HAEIN (P43866) GTP cyclohydrolase I (EC 3.5.4.16) (GTP-CH-I)| Length = 218 Score = 32.7 bits (73), Expect = 1.0 Identities = 25/114 (21%), Positives = 54/114 (47%), Gaps = 1/114 (0%) Frame = -3 Query: 489 FGGISYLGFEKLTFVPIQRKLIDLPLLSPLEINWVNEYH-EEVWEKVSPFLSGNPRNWLL 313 F G+ Y F K+T + Q K+ ++ ++ + + E+H + KV ++ P++W++ Sbjct: 74 FSGMDYANFPKMTKIKNQMKVSEMVQVNDITLTSTCEHHFVTIDGKVC--VAYYPKDWVI 131 Query: 312 DNTRPL*TPSMSQHDKKQQKRAIQQVFTSWQQARENDGKAEGIG*SWFILSVSG 151 ++ S + Q+R +Q+ T++Q E D A + + F + G Sbjct: 132 GLSKINRIVSFFAQRPQVQERLTEQLLTAFQTILETDDVAVYVKATHFCVKARG 185
>PEPQ_PYRFU (P81535) Xaa-Pro dipeptidase (EC 3.4.13.9) (X-Pro dipeptidase)| (Proline dipeptidase) (Prolidase) (Imidodipeptidase) Length = 348 Score = 32.0 bits (71), Expect = 1.8 Identities = 13/31 (41%), Positives = 22/31 (70%) Frame = -3 Query: 600 LQKGMIVSNEPGYYEDNSFGIRIENLLLVKE 508 L++GM+++ EPG Y G+RIE+ +L+ E Sbjct: 304 LKEGMVITIEPGIYIPKLGGVRIEDTVLITE 334
>YPDF_ECOLI (P76524) Aminopeptidase ypdF (EC 3.4.11.-)| Length = 361 Score = 32.0 bits (71), Expect = 1.8 Identities = 14/29 (48%), Positives = 21/29 (72%) Frame = -3 Query: 600 LQKGMIVSNEPGYYEDNSFGIRIENLLLV 514 LQ GM+++ EPG Y G+RIE+++LV Sbjct: 312 LQPGMLLTVEPGIYLPGQGGVRIEDVVLV 340
>YOD1_SCHPO (Q9UUD8) Probable peptidase C18A7.01 (EC 3.4.-.-)| Length = 451 Score = 32.0 bits (71), Expect = 1.8 Identities = 14/32 (43%), Positives = 21/32 (65%) Frame = -3 Query: 600 LQKGMIVSNEPGYYEDNSFGIRIENLLLVKEV 505 +QKG + + EPG Y + GIRIE+ +L +V Sbjct: 405 VQKGNVFTVEPGIYIPDEIGIRIEDAVLASDV 436
>YGFK_ECOLI (Q46811) Hypothetical protein ygfK| Length = 1032 Score = 31.6 bits (70), Expect = 2.3 Identities = 22/76 (28%), Positives = 35/76 (46%) Frame = -3 Query: 468 GFEKLTFVPIQRKLIDLPLLSPLEINWVNEYHEEVWEKVSPFLSGNPRNWLLDNTRPL*T 289 G EK T V +R L ++P W EY E + + V NP + D T L Sbjct: 702 GVEKATIV-YRRSLQEMPA-------WREEYEEALHDGVEFRFLNNPERFDADGTLTLRV 753 Query: 288 PSMSQHDKKQQKRAIQ 241 S+ + D+K ++R ++ Sbjct: 754 MSLGEPDEKGRRRPVE 769
>AKA11_HUMAN (Q9UKA4) A-kinase anchor protein 11 (Protein kinase A-anchoring| protein 11) (PRKA11) (A kinase anchor protein 220 kDa) (AKAP 220) (hAKAP220) Length = 1901 Score = 31.2 bits (69), Expect = 3.0 Identities = 18/71 (25%), Positives = 30/71 (42%) Frame = +3 Query: 387 PNLSPKVIARVSQ*AFSESEQKLVSQSPGMRCRQKNWLN*PPSPEADSRYECQMNCLHNN 566 PN+ + + S E Q +SP Q + S D EC+++ +H + Sbjct: 959 PNIDKNAVYKESLPVSGEESQLTPEKSPKFPDSQNQLTHCSLSAAKDCVPECKVSMVHGS 1018 Query: 567 QVHCLQSCPSV 599 + L SCP+V Sbjct: 1019 SLETLPSCPAV 1029
>YQHT_BACSU (P54518) Putative peptidase yqhT (EC 3.4.-.-)| Length = 353 Score = 31.2 bits (69), Expect = 3.0 Identities = 13/31 (41%), Positives = 22/31 (70%) Frame = -3 Query: 600 LQKGMIVSNEPGYYEDNSFGIRIENLLLVKE 508 L+ GM+V+ EPG Y + G+RIE+ +++ E Sbjct: 307 LEPGMVVTVEPGIYIPETGGVRIEDDIVITE 337
>YGFK_ECO57 (Q8XD75) Hypothetical protein ygfK| Length = 1032 Score = 31.2 bits (69), Expect = 3.0 Identities = 22/76 (28%), Positives = 35/76 (46%) Frame = -3 Query: 468 GFEKLTFVPIQRKLIDLPLLSPLEINWVNEYHEEVWEKVSPFLSGNPRNWLLDNTRPL*T 289 G EK T V +R L ++P W EY E + + V NP + D T L Sbjct: 702 GVEKATVV-YRRSLQEMPA-------WREEYEEALHDGVEFRFLNNPERFDADGTLTLRV 753 Query: 288 PSMSQHDKKQQKRAIQ 241 S+ + D+K ++R ++ Sbjct: 754 MSLGEPDEKGRRRPVE 769
>AMPP_MYCGE (P47566) Putative Xaa-Pro aminopeptidase (EC 3.4.11.9) (X-Pro| aminopeptidase) (Aminopeptidase P) (APP) (Aminoacylproline aminopeptidase) Length = 354 Score = 30.8 bits (68), Expect = 4.0 Identities = 14/26 (53%), Positives = 20/26 (76%) Frame = -3 Query: 585 IVSNEPGYYEDNSFGIRIENLLLVKE 508 +V+ EPG Y N GIRIE+++LVK+ Sbjct: 315 VVTIEPGIYIPNLGGIRIEDMVLVKK 340
>PEPQ_PYRHO (O58885) Xaa-Pro dipeptidase (EC 3.4.13.9) (X-Pro dipeptidase)| (Proline dipeptidase) (Prolidase) (Imidodipeptidase) Length = 351 Score = 30.8 bits (68), Expect = 4.0 Identities = 12/29 (41%), Positives = 21/29 (72%) Frame = -3 Query: 600 LQKGMIVSNEPGYYEDNSFGIRIENLLLV 514 L++GM+++ EPG Y G+RIE+ +L+ Sbjct: 307 LREGMVITIEPGIYIPKIGGVRIEDTILI 335
>GCH1_PASMU (P57865) GTP cyclohydrolase I (EC 3.5.4.16) (GTP-CH-I)| Length = 218 Score = 30.4 bits (67), Expect = 5.2 Identities = 21/113 (18%), Positives = 52/113 (46%) Frame = -3 Query: 489 FGGISYLGFEKLTFVPIQRKLIDLPLLSPLEINWVNEYHEEVWEKVSPFLSGNPRNWLLD 310 F G+ Y F K+T + + K+ ++ L++ + + E+H + + ++ P+ W++ Sbjct: 74 FSGLDYANFPKITNIENRMKVSEMVLVNDVTLTSTCEHHFVTIDGMVS-VAYYPKKWVIG 132 Query: 309 NTRPL*TPSMSQHDKKQQKRAIQQVFTSWQQARENDGKAEGIG*SWFILSVSG 151 ++ + + Q+R +Q+ ++Q E D A + + F + G Sbjct: 133 LSKINRIVAFFAQRPQVQERLTEQILLAFQTILETDDVAVYVKATHFCVKCRG 185
>GCH1_HAEDU (Q7VM90) GTP cyclohydrolase I (EC 3.5.4.16) (GTP-CH-I)| Length = 218 Score = 30.4 bits (67), Expect = 5.2 Identities = 21/100 (21%), Positives = 48/100 (48%), Gaps = 1/100 (1%) Frame = -3 Query: 489 FGGISYLGFEKLTFVPIQRKLIDLPLLSPLEINWVNEYH-EEVWEKVSPFLSGNPRNWLL 313 F G+ Y F K+T + + K+ ++ L+ + + E+H + KV+ ++ P+ W++ Sbjct: 74 FSGLDYATFPKITTIENRMKVSEMVLVDDITLTSTCEHHFVTIDGKVA--VAYYPKKWVI 131 Query: 312 DNTRPL*TPSMSQHDKKQQKRAIQQVFTSWQQARENDGKA 193 ++ + Q+R +Q+ T++Q E + A Sbjct: 132 GLSKINRVVQFFAQRPQVQERFTEQILTAFQTILETEDVA 171
>POLS2_MOUSE (Q5K2P8) Polyserase-2 precursor (EC 3.4.21.-) (Polyserine protease| 2) (Protease serine 36) Length = 849 Score = 30.4 bits (67), Expect = 5.2 Identities = 14/38 (36%), Positives = 22/38 (57%) Frame = +3 Query: 468 PGMRCRQKNWLN*PPSPEADSRYECQMNCLHNNQVHCL 581 PG RCR W + P+P + ++ E Q+ L++ HCL Sbjct: 434 PGSRCRLARWGHGEPAPRSSAQLEAQL--LNSWWCHCL 469
>ICK_MOUSE (Q9JKV2) Serine/threonine-protein kinase ICK (EC 2.7.11.22)| (Intestinal cell kinase) (mICK) (MAK-related kinase) (MRK) Length = 629 Score = 30.0 bits (66), Expect = 6.7 Identities = 12/30 (40%), Positives = 17/30 (56%) Frame = +3 Query: 336 HSRKGKPFPKLLHGTH*PNLSPKVIARVSQ 425 H ++GKP P H NL PK++A + Q Sbjct: 360 HVQEGKPSPPFFPSLHNKNLQPKILASLEQ 389
>OFUT1_CAEEL (Q18014) Putative GDP-fucose protein O-fucosyltransferase 1| precursor (EC 2.4.1.221) (Peptide-O-fucosyltransferase) (O-FucT-1) Length = 389 Score = 30.0 bits (66), Expect = 6.7 Identities = 12/28 (42%), Positives = 18/28 (64%) Frame = +3 Query: 276 ATCWVSREALCYPTASCEDCHSRKGKPF 359 A CW R+A+ Y ++ CHS++G PF Sbjct: 117 AFCWTPRQAI-YDKSAEPGCHSKEGNPF 143
>VATH1_CAEEL (Q20666) Probable vacuolar ATP synthase subunit H 1 (EC 3.6.3.14)| (V-ATPase H subunit 1) (Vacuolar proton pump H subunit 1) (Vacuolar proton pump subunit SFD 1) Length = 451 Score = 29.6 bits (65), Expect = 8.8 Identities = 23/83 (27%), Positives = 35/83 (42%), Gaps = 2/83 (2%) Frame = -1 Query: 257 KKEQFSKYSLLGSKQGKTMARPKALVEAGLFYRYLVSLVRCSKQ--RSDLHTSSFAIGYM 84 K F L G + M K + G Y+V+ VRC + R D + SF Sbjct: 142 KMAVFGNIKLSGDELDYCMGSLKEAMNRGTNNDYIVTAVRCMQTLFRFDPYRVSFV---N 198 Query: 83 ISNHDSSVWSLFPYNQCGIFVIY 15 I+ +DS +L+ +CG + Y Sbjct: 199 INGYDSLTHALYSTRKCGFQIQY 221 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 101,092,265 Number of Sequences: 219361 Number of extensions: 2111904 Number of successful extensions: 5178 Number of sequences better than 10.0: 24 Number of HSP's better than 10.0 without gapping: 5037 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5174 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6655306086 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
