ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd2n08
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_477069.1| Oryza sativa (japonica cultivar-group), mRNA 369 8e-99
2dbj|AK120553.1| Oryza sativa (japonica cultivar-group) cDNA clon... 369 8e-99
3dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 202 1e-48
4dbj|AP003943.3| Oryza sativa (japonica cultivar-group) genomic D... 202 1e-48
5ref|NM_111408.3| Arabidopsis thaliana aminopeptidase/ metalloexo... 74 7e-10
6gb|BT001080.1| Arabidopsis thaliana At3g05350/T12H1_32 mRNA, com... 74 7e-10
7gb|AY079018.1| Arabidopsis thaliana AT3g05350/T12H1_32 mRNA, com... 74 7e-10
8gb|AC146571.13| Medicago truncatula clone mth2-104a2, complete s... 72 3e-09
9gb|AC135319.28| Medicago truncatula clone mth2-6g4, complete seq... 72 3e-09
10gb|AC009177.7|ATAC009177 Arabidopsis thaliana chromosome III BAC... 68 4e-08
11dbj|AB236853.1| Trifolium pratense RNA for putative DNA-damage-r... 64 6e-07
12emb|AL133359.1|SPAPJ696 S.pombe chromosome I PCR product p696 46 0.15
13ref|NM_001018448.1| Schizosaccharomyces pombe 972h- hypothetical... 46 0.15
14emb|AJ308541.1|LES308541 Lycopersicon esculentum mRNA for Xaa-Pr... 46 0.15
15emb|CR381658.11| Zebrafish DNA sequence from clone CH211-245M20 ... 46 0.15
16gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome 44 0.59
17gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete g... 44 0.59
18ref|NM_128404.1| Arabidopsis thaliana unknown protein AT2G28440 ... 42 2.3
19gb|AY868979.1| Uncultured alpha proteobacterium clone I3K-0178 1... 42 2.3
20gb|AC122477.5| Mus musculus BAC clone RP24-336L24 from chromosom... 42 2.3
21gb|AC151835.4| Mus musculus BAC clone RP23-333J1 from chromosome... 42 2.3
22emb|AL662843.11| Mouse DNA sequence from clone RP23-411E22 on ch... 42 2.3
23gb|DQ056548.1| Arabidopsis thaliana proline-rich family protein ... 42 2.3
24gb|AC006283.6| Arabidopsis thaliana chromosome 2 clone T1B3 map ... 42 2.3
25dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.3
26dbj|AP005419.3| Oryza sativa (japonica cultivar-group) genomic D... 42 2.3
27dbj|AP005570.3| Oryza sativa (japonica cultivar-group) genomic D... 42 2.3
28dbj|AP000789.5| Homo sapiens genomic DNA, chromosome 11 clone:RP... 42 2.3
29gb|AC133935.3| Mus musculus BAC clone RP24-387M21 from 3, comple... 42 2.3
30gb|AC132225.3| Mus musculus BAC clone RP24-558H21 from 3, comple... 42 2.3
31gb|BC106004.1| Homo sapiens pleiotropic regulator 1 (PRL1 homolo... 40 9.3
32ref|XM_517494.1| PREDICTED: Pan troglodytes pleiotropic regulato... 40 9.3
33ref|NM_002669.2| Homo sapiens pleiotropic regulator 1 (PRL1 homo... 40 9.3
34gb|AC005065.1| Homo sapiens BAC clone CTB-114B19 from 7, complet... 40 9.3
35emb|CR376724.12| Zebrafish DNA sequence from clone DKEY-174A16 i... 40 9.3
36gb|AC024158.5| Homo sapiens chromosome 3 clone RP11-245A6 map 3p... 40 9.3
37gb|AC125224.3| Mus musculus BAC clone RP23-33N8 from 17, complet... 40 9.3
38emb|CR847503.8| Zebrafish DNA sequence from clone DKEY-20D21 in ... 40 9.3
39emb|AL645820.1| Human DNA sequence from clone RP1-138O17 on chro... 40 9.3
40emb|AL445523.11| Human DNA sequence from clone RP11-231N9 on chr... 40 9.3
41emb|AL138878.10| Human DNA sequence from clone RP11-288G3 on chr... 40 9.3
42gb|DQ088854.1| Uncultured bacterium eBACmed18B02 probable aminop... 40 9.3
43emb|CR388175.9| Zebrafish DNA sequence from clone DKEY-63B1 in l... 40 9.3
44emb|CR620440.1| full-length cDNA clone CS0DJ011YL18 of T cells (... 40 9.3
45emb|CR619619.1| full-length cDNA clone CS0DI056YC16 of Placenta ... 40 9.3
46emb|CR618318.1| full-length cDNA clone CS0DI014YL17 of Placenta ... 40 9.3
47emb|CR615444.1| full-length cDNA clone CS0DC015YI15 of Neuroblas... 40 9.3
48emb|CR614678.1| full-length cDNA clone CS0DF001YF15 of Fetal bra... 40 9.3
49emb|CR606429.1| full-length cDNA clone CS0DI014YD19 of Placenta ... 40 9.3
50emb|CR605729.1| full-length cDNA clone CS0DD003YM19 of Neuroblas... 40 9.3
51emb|CR601633.1| full-length cDNA clone CS0DB004YO02 of Neuroblas... 40 9.3
52emb|CR600370.1| full-length cDNA clone CS0DA005YO21 of Neuroblas... 40 9.3
53emb|CR598423.1| full-length cDNA clone CS0DD006YN22 of Neuroblas... 40 9.3
54dbj|AK002108.1| Homo sapiens cDNA FLJ11246 fis, clone PLACE10086... 40 9.3
55gb|AC100844.2| Homo sapiens chromosome 18, clone RP11-659F24, co... 40 9.3
56gb|AC107385.4| Homo sapiens BAC clone RP11-158C21 from 4, comple... 40 9.3
57gb|AC021561.8| Homo sapiens chromosome 18, clone RP11-766D3, com... 40 9.3
58gb|DQ103595.1| Arabidopsis arenosa clone BAC 28N14, complete seq... 40 9.3
59gb|DQ103594.1| Capsella rubella clone BAC 8F1, complete sequence 40 9.3
60ref|XM_936260.1| PREDICTED: Homo sapiens hypothetical protein LO... 40 9.3
61ref|XM_926850.1| PREDICTED: Homo sapiens hypothetical protein LO... 40 9.3
62dbj|AB179186.1| Macaca fascicularis testis cDNA clone: QtsA-1443... 40 9.3
63gb|AF001905.1|AF001905 Homo sapiens cosmids E079, B0920 and A8 f... 40 9.3
64gb|AC158511.2| Mus musculus BAC clone RP24-242G2 from chromosome... 40 9.3
65dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.3
66gb|AC090669.9| Homo sapiens 12 BAC RP11-780K2 (Roswell Park Canc... 40 9.3
67gb|AC016562.7| Homo sapiens chromosome 5 clone CTC-484A9, comple... 40 9.3
68dbj|AP003714.2| Oryza sativa (japonica cultivar-group) genomic D... 40 9.3
69emb|CR391988.6| Zebrafish DNA sequence from clone CH211-107O23 i... 40 9.3
70emb|BX901926.19| Zebrafish DNA sequence from clone CH211-195N20 ... 40 9.3
71gb|BC020786.1| Homo sapiens pleiotropic regulator 1 (PRL1 homolo... 40 9.3
72gb|AF044333.1|AF044333 Homo sapiens pleiotropic regulator 1 (PLR... 40 9.3
73gb|AC005549.1|AC005549 Homo sapiens chromosome 17, clone hRPK.21... 40 9.3
74gb|BC036046.1| Homo sapiens cDNA clone IMAGE:5273244, containing... 40 9.3
75emb|CT025674.13| Mouse DNA sequence from clone RP24-364I17 on ch... 40 9.3
76emb|CT030664.5| Mouse DNA sequence from clone RP23-357K7 on chro... 40 9.3
77gb|AC124737.5| Mus musculus BAC clone RP23-330K22 from 13, compl... 40 9.3
78emb|CT009635.18| Mouse DNA sequence from clone RP23-109E18 on ch... 40 9.3
79dbj|AP004499.1| Lotus japonicus genomic DNA, chromosome 1, clone... 40 9.3
80emb|Z72519.1|HSJ13817A Human DNA sequence from cosmid J138O17, b... 40 9.3
81emb|AL390025.1| Human DNA sequence from clone RP3-336K20 on chro... 40 9.3 
>ref|XM_477069.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2157

 Score =  369 bits (186), Expect = 8e-99
 Identities = 317/358 (88%), Gaps = 2/358 (0%)
 Strand = Plus / Minus

                                                                        
Query: 317  agccagttgcgaggattgccactcaagaaaggggaaaccttttcccaaacttcttcatgg 376
            ||||||| | ||| || ||||||||| |||||||||||||||||||| ||||| ||||||
Sbjct: 2132 agccagtcgagagaatggccactcaacaaaggggaaaccttttcccagacttcgtcatgg 2073

                                                                        
Query: 377  tactcattgacccaatttatctccaaaggtgatagcaagggtaagtcaataagctttctc 436
            || ||||||| |||||| |||||| |||||||||| ||||  || |||| |||||| |||
Sbjct: 2072 tattcattgatccaattgatctccgaaggtgatagtaaggacaaatcaacaagcttgctc 2013

                                                                        
Query: 437  tgaatcggaacaaaagttagtttctcaaagcccaggtatgagatgccgccaaaagaattg 496
            ||||| ||||||||||||| ||| ||||| || ||||| |||| ||| ||||| ||||| 
Sbjct: 2012 tgaattggaacaaaagttaatttttcaaaaccaaggtacgagacgccaccaaacgaattt 1953

                                                                        
Query: 497  gctaaattaacctccttcaccagaagcagattctcgatacgaatgccaaatgaattgtct 556
            |  ||||||||||| || |||||||| |||||||| |||||||||||||| |||||||||
Sbjct: 1952 ggcaaattaacctctttgaccagaagaagattctctatacgaatgccaaaggaattgtct 1893

                                                                        
Query: 557  tcataataaccaggttcattgcttacaatcatgcccttctgtaaagctggtcaagtttcc 616
            || ||||||||||| ||||||||||| ||||||||||||||||||||| ||||| |||||
Sbjct: 1892 tcgtaataaccaggctcattgcttacgatcatgcccttctgtaaagct-gtcaaatttcc 1834

                                                                      
Query: 617  atatcgatagcttatgctctgcgggccctcatggacatttaagtgcagctccaactcc 674
            ||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||
Sbjct: 1833 atatcgatagcttatgctctgagggccctcatggacattt-agtgcagctccaactcc 1777
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>dbj|AK120553.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013130G17, full
            insert sequence
          Length = 2691

 Score =  369 bits (186), Expect = 8e-99
 Identities = 317/358 (88%), Gaps = 2/358 (0%)
 Strand = Plus / Minus

                                                                        
Query: 317  agccagttgcgaggattgccactcaagaaaggggaaaccttttcccaaacttcttcatgg 376
            ||||||| | ||| || ||||||||| |||||||||||||||||||| ||||| ||||||
Sbjct: 2199 agccagtcgagagaatggccactcaacaaaggggaaaccttttcccagacttcgtcatgg 2140

                                                                        
Query: 377  tactcattgacccaatttatctccaaaggtgatagcaagggtaagtcaataagctttctc 436
            || ||||||| |||||| |||||| |||||||||| ||||  || |||| |||||| |||
Sbjct: 2139 tattcattgatccaattgatctccgaaggtgatagtaaggacaaatcaacaagcttgctc 2080

                                                                        
Query: 437  tgaatcggaacaaaagttagtttctcaaagcccaggtatgagatgccgccaaaagaattg 496
            ||||| ||||||||||||| ||| ||||| || ||||| |||| ||| ||||| ||||| 
Sbjct: 2079 tgaattggaacaaaagttaatttttcaaaaccaaggtacgagacgccaccaaacgaattt 2020

                                                                        
Query: 497  gctaaattaacctccttcaccagaagcagattctcgatacgaatgccaaatgaattgtct 556
            |  ||||||||||| || |||||||| |||||||| |||||||||||||| |||||||||
Sbjct: 2019 ggcaaattaacctctttgaccagaagaagattctctatacgaatgccaaaggaattgtct 1960

                                                                        
Query: 557  tcataataaccaggttcattgcttacaatcatgcccttctgtaaagctggtcaagtttcc 616
            || ||||||||||| ||||||||||| ||||||||||||||||||||| ||||| |||||
Sbjct: 1959 tcgtaataaccaggctcattgcttacgatcatgcccttctgtaaagct-gtcaaatttcc 1901

                                                                      
Query: 617  atatcgatagcttatgctctgcgggccctcatggacatttaagtgcagctccaactcc 674
            ||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||
Sbjct: 1900 atatcgatagcttatgctctgagggccctcatggacattt-agtgcagctccaactcc 1844
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score =  202 bits (102), Expect = 1e-48
 Identities = 134/142 (94%), Gaps = 2/142 (1%)
 Strand = Plus / Plus

                                                                           
Query: 533     atacgaatgccaaatgaattgtcttcataataaccaggttcattgcttacaatcatgccc 592
               |||||||||||||| ||||||||||| ||||||||||| ||||||||||| |||||||||
Sbjct: 5725779 atacgaatgccaaaggaattgtcttcgtaataaccaggctcattgcttacgatcatgccc 5725838

                                                                           
Query: 593     ttctgtaaagctggtcaagtttccatatcgatagcttatgctctgcgggccctcatggac 652
               |||||||||||| ||||| |||||||||||||||||||||||||| ||||||||||||||
Sbjct: 5725839 ttctgtaaagct-gtcaaatttccatatcgatagcttatgctctgagggccctcatggac 5725897

                                     
Query: 653     atttaagtgcagctccaactcc 674
               |||| |||||||||||||||||
Sbjct: 5725898 attt-agtgcagctccaactcc 5725918



 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 76/88 (86%)
 Strand = Plus / Plus

                                                                           
Query: 353     accttttcccaaacttcttcatggtactcattgacccaatttatctccaaaggtgatagc 412
               ||||||||||| ||||| |||||||| ||||||| |||||| |||||| |||||||||| 
Sbjct: 5725227 accttttcccagacttcgtcatggtattcattgatccaattgatctccgaaggtgatagt 5725286

                                           
Query: 413     aagggtaagtcaataagctttctctgaa 440
               ||||  || |||| |||||| |||||||
Sbjct: 5725287 aaggacaaatcaacaagcttgctctgaa 5725314



 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 80/95 (84%)
 Strand = Plus / Plus

                                                                           
Query: 436     ctgaatcggaacaaaagttagtttctcaaagcccaggtatgagatgccgccaaaagaatt 495
               |||||| ||||||||||||| ||| ||||| || ||||| |||| ||| ||||| |||||
Sbjct: 5725564 ctgaattggaacaaaagttaatttttcaaaaccaaggtacgagacgccaccaaacgaatt 5725623

                                                  
Query: 496     ggctaaattaacctccttcaccagaagcagattct 530
                |  ||||||||||| || |||||||| |||||||
Sbjct: 5725624 tggcaaattaacctctttgaccagaagaagattct 5725658



 Score = 40.1 bits (20), Expect = 9.3
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                       
Query: 317     agccagttgcgaggattgccactcaagaaaggggaaacct 356
               ||||||| | ||| || ||||||||| |||||||||||||
Sbjct: 5724611 agccagtcgagagaatggccactcaacaaaggggaaacct 5724650
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>dbj|AP003943.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1119_B04
          Length = 151721

 Score =  202 bits (102), Expect = 1e-48
 Identities = 134/142 (94%), Gaps = 2/142 (1%)
 Strand = Plus / Plus

                                                                         
Query: 533   atacgaatgccaaatgaattgtcttcataataaccaggttcattgcttacaatcatgccc 592
             |||||||||||||| ||||||||||| ||||||||||| ||||||||||| |||||||||
Sbjct: 32807 atacgaatgccaaaggaattgtcttcgtaataaccaggctcattgcttacgatcatgccc 32866

                                                                         
Query: 593   ttctgtaaagctggtcaagtttccatatcgatagcttatgctctgcgggccctcatggac 652
             |||||||||||| ||||| |||||||||||||||||||||||||| ||||||||||||||
Sbjct: 32867 ttctgtaaagct-gtcaaatttccatatcgatagcttatgctctgagggccctcatggac 32925

                                   
Query: 653   atttaagtgcagctccaactcc 674
             |||| |||||||||||||||||
Sbjct: 32926 attt-agtgcagctccaactcc 32946



 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 76/88 (86%)
 Strand = Plus / Plus

                                                                         
Query: 353   accttttcccaaacttcttcatggtactcattgacccaatttatctccaaaggtgatagc 412
             ||||||||||| ||||| |||||||| ||||||| |||||| |||||| |||||||||| 
Sbjct: 32255 accttttcccagacttcgtcatggtattcattgatccaattgatctccgaaggtgatagt 32314

                                         
Query: 413   aagggtaagtcaataagctttctctgaa 440
             ||||  || |||| |||||| |||||||
Sbjct: 32315 aaggacaaatcaacaagcttgctctgaa 32342



 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 80/95 (84%)
 Strand = Plus / Plus

                                                                         
Query: 436   ctgaatcggaacaaaagttagtttctcaaagcccaggtatgagatgccgccaaaagaatt 495
             |||||| ||||||||||||| ||| ||||| || ||||| |||| ||| ||||| |||||
Sbjct: 32592 ctgaattggaacaaaagttaatttttcaaaaccaaggtacgagacgccaccaaacgaatt 32651

                                                
Query: 496   ggctaaattaacctccttcaccagaagcagattct 530
              |  ||||||||||| || |||||||| |||||||
Sbjct: 32652 tggcaaattaacctctttgaccagaagaagattct 32686



 Score = 40.1 bits (20), Expect = 9.3
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                     
Query: 317   agccagttgcgaggattgccactcaagaaaggggaaacct 356
             ||||||| | ||| || ||||||||| |||||||||||||
Sbjct: 31639 agccagtcgagagaatggccactcaacaaaggggaaacct 31678
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>ref|NM_111408.3| Arabidopsis thaliana aminopeptidase/ metalloexopeptidase AT3G05350
            mRNA, complete cds
          Length = 1947

 Score = 73.8 bits (37), Expect = 7e-10
 Identities = 64/73 (87%)
 Strand = Plus / Minus

                                                                        
Query: 519  gaagcagattctcgatacgaatgccaaatgaattgtcttcataataaccaggttcattgc 578
            |||| |||||||| || || || ||||||| || |||||||||||| |||||||||||||
Sbjct: 1568 gaaggagattctcaattcggatcccaaatgcatggtcttcataatatccaggttcattgc 1509

                         
Query: 579  ttacaatcatgcc 591
            |||| ||||||||
Sbjct: 1508 ttactatcatgcc 1496
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>gb|BT001080.1| Arabidopsis thaliana At3g05350/T12H1_32 mRNA, complete cds
          Length = 2133

 Score = 73.8 bits (37), Expect = 7e-10
 Identities = 64/73 (87%)
 Strand = Plus / Minus

                                                                        
Query: 519  gaagcagattctcgatacgaatgccaaatgaattgtcttcataataaccaggttcattgc 578
            |||| |||||||| || || || ||||||| || |||||||||||| |||||||||||||
Sbjct: 1894 gaaggagattctcaattcggatcccaaatgcatggtcttcataatatccaggttcattgc 1835

                         
Query: 579  ttacaatcatgcc 591
            |||| ||||||||
Sbjct: 1834 ttactatcatgcc 1822
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>gb|AY079018.1| Arabidopsis thaliana AT3g05350/T12H1_32 mRNA, complete cds
          Length = 2298

 Score = 73.8 bits (37), Expect = 7e-10
 Identities = 64/73 (87%)
 Strand = Plus / Minus

                                                                        
Query: 519  gaagcagattctcgatacgaatgccaaatgaattgtcttcataataaccaggttcattgc 578
            |||| |||||||| || || || ||||||| || |||||||||||| |||||||||||||
Sbjct: 1918 gaaggagattctcaattcggatcccaaatgcatggtcttcataatatccaggttcattgc 1859

                         
Query: 579  ttacaatcatgcc 591
            |||| ||||||||
Sbjct: 1858 ttactatcatgcc 1846
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>gb|AC146571.13| Medicago truncatula clone mth2-104a2, complete sequence
          Length = 140639

 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 51/56 (91%)
 Strand = Plus / Plus

                                                                    
Query: 536  cgaatgccaaatgaattgtcttcataataaccaggttcattgcttacaatcatgcc 591
            |||||||| || | || |||||||||||| ||||||||||||||||||||||||||
Sbjct: 6466 cgaatgccgaaagcatggtcttcataatagccaggttcattgcttacaatcatgcc 6521
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>gb|AC135319.28| Medicago truncatula clone mth2-6g4, complete sequence
          Length = 120194

 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 51/56 (91%)
 Strand = Plus / Plus

                                                                     
Query: 536   cgaatgccaaatgaattgtcttcataataaccaggttcattgcttacaatcatgcc 591
             |||||||| || | || |||||||||||| ||||||||||||||||||||||||||
Sbjct: 95725 cgaatgccgaaagcatggtcttcataatagccaggttcattgcttacaatcatgcc 95780
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>gb|AC009177.7|ATAC009177 Arabidopsis thaliana chromosome III BAC T12H1 genomic sequence, complete
              sequence
          Length = 140064

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 46/50 (92%)
 Strand = Plus / Plus

                                                                
Query: 542    ccaaatgaattgtcttcataataaccaggttcattgcttacaatcatgcc 591
              ||||||| || |||||||||||| ||||||||||||||||| ||||||||
Sbjct: 123785 ccaaatgcatggtcttcataatatccaggttcattgcttactatcatgcc 123834
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>dbj|AB236853.1| Trifolium pratense RNA for putative DNA-damage-repair/toleration
            protein DRT102, complete cds, clone: C669
          Length = 3563

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 50/56 (89%)
 Strand = Plus / Minus

                                                                    
Query: 536  cgaatgccaaatgaattgtcttcataataaccaggttcattgcttacaatcatgcc 591
            |||||||| || | || |||||||||||||||||| |||||||| |||||||||||
Sbjct: 2134 cgaatgccgaaggcatggtcttcataataaccaggctcattgctaacaatcatgcc 2079
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>emb|AL133359.1|SPAPJ696 S.pombe chromosome I PCR product p696
          Length = 5404

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                       
Query: 554  tcttcataataaccaggttcattgctt 580
            ||||||||| |||||||||||||||||
Sbjct: 4938 tcttcataaaaaccaggttcattgctt 4964
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>ref|NM_001018448.1| Schizosaccharomyces pombe 972h- hypothetical protein (SPAC22G7.01c),
            partial mRNA
          Length = 1797

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                       
Query: 554  tcttcataataaccaggttcattgctt 580
            ||||||||| |||||||||||||||||
Sbjct: 1535 tcttcataaaaaccaggttcattgctt 1509
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>emb|AJ308541.1|LES308541 Lycopersicon esculentum mRNA for Xaa-Pro aminopeptidase 1 (app1 gene)
          Length = 2198

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 553  gtcttcataataaccaggttcat 575
            |||||||||||||||||||||||
Sbjct: 1767 gtcttcataataaccaggttcat 1745
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>emb|CR381658.11| Zebrafish DNA sequence from clone CH211-245M20 in linkage group 3,
            complete sequence
          Length = 159132

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 243  gaattgctcttttttgttgcttt 265
            |||||||||||||||||||||||
Sbjct: 3344 gaattgctcttttttgttgcttt 3322
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>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 513     tcaccagaagcagattctcgat 534
               ||||||||||||||||||||||
Sbjct: 1959534 tcaccagaagcagattctcgat 1959513
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>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome
          Length = 2909809

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 185     atgccttcggccttgccatcgt 206
               ||||||||||||||||||||||
Sbjct: 2355219 atgccttcggccttgccatcgt 2355240
to top
>ref|NM_128404.1| Arabidopsis thaliana unknown protein AT2G28440 mRNA, complete cds
          Length = 807

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 511 cttcaccagaagcagattctc 531
           |||||||||||||||||||||
Sbjct: 326 cttcaccagaagcagattctc 346
to top
>gb|AY868979.1| Uncultured alpha proteobacterium clone I3K-0178 16S ribosomal RNA
           gene, partial sequence
          Length = 452

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 89  aaccgatggcaaatgaagatg 109
           |||||||||||||||||||||
Sbjct: 45  aaccgatggcaaatgaagatg 25
to top
>gb|AC122477.5| Mus musculus BAC clone RP24-336L24 from chromosome 14, complete
             sequence
          Length = 158605

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 443   ggaacaaaagttagtttctca 463
             |||||||||||||||||||||
Sbjct: 32666 ggaacaaaagttagtttctca 32686
to top
>gb|AC151835.4| Mus musculus BAC clone RP23-333J1 from chromosome 14, complete sequence
          Length = 215551

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 443   ggaacaaaagttagtttctca 463
             |||||||||||||||||||||
Sbjct: 82930 ggaacaaaagttagtttctca 82910
to top
>emb|AL662843.11| Mouse DNA sequence from clone RP23-411E22 on chromosome 11 Contains the
             3' end of the Col23a1 gene for procollagen (type XXIII,
             alpha 1), the 5' end of a novel gene and a CpG island,
             complete sequence
          Length = 155917

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 249   ctcttttttgttgctttttgt 269
             |||||||||||||||||||||
Sbjct: 92409 ctcttttttgttgctttttgt 92429
to top
>gb|DQ056548.1| Arabidopsis thaliana proline-rich family protein (At2g28440) mRNA,
           complete cds
          Length = 807

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 511 cttcaccagaagcagattctc 531
           |||||||||||||||||||||
Sbjct: 326 cttcaccagaagcagattctc 346
to top
>gb|AC006283.6| Arabidopsis thaliana chromosome 2 clone T1B3 map mi54, complete
            sequence
          Length = 93122

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 511  cttcaccagaagcagattctc 531
            |||||||||||||||||||||
Sbjct: 8956 cttcaccagaagcagattctc 8936
to top
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 358      ttcccaaacttcttcatggta 378
                |||||||||||||||||||||
Sbjct: 16342271 ttcccaaacttcttcatggta 16342291
to top
>dbj|AP005419.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0046G12
          Length = 189391

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 358   ttcccaaacttcttcatggta 378
             |||||||||||||||||||||
Sbjct: 30818 ttcccaaacttcttcatggta 30838
to top
>dbj|AP005570.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:OJ1344_B01
          Length = 170912

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 358    ttcccaaacttcttcatggta 378
              |||||||||||||||||||||
Sbjct: 158787 ttcccaaacttcttcatggta 158807
to top
>dbj|AP000789.5| Homo sapiens genomic DNA, chromosome 11 clone:RP11-725K16, complete
             sequence
          Length = 195874

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 358   ttcccaaacttcttcatggta 378
             |||||||||||||||||||||
Sbjct: 60029 ttcccaaacttcttcatggta 60049
to top
>gb|AC133935.3| Mus musculus BAC clone RP24-387M21 from 3, complete sequence
          Length = 182101

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 223    ccaagaagtgaatacttgctg 243
              |||||||||||||||||||||
Sbjct: 133860 ccaagaagtgaatacttgctg 133880
to top
>gb|AC132225.3| Mus musculus BAC clone RP24-558H21 from 3, complete sequence
          Length = 189301

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 223  ccaagaagtgaatacttgctg 243
            |||||||||||||||||||||
Sbjct: 2059 ccaagaagtgaatacttgctg 2079
to top
>gb|BC106004.1| Homo sapiens pleiotropic regulator 1 (PRL1 homolog, Arabidopsis),
           mRNA (cDNA clone MGC:110980 IMAGE:3889109), complete cds
          Length = 1797

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 645 tcatggacatttaagtgcag 664
           ||||||||||||||||||||
Sbjct: 915 tcatggacatttaagtgcag 934
to top
>ref|XM_517494.1| PREDICTED: Pan troglodytes pleiotropic regulator 1 (PRL1homolog,
           Arabidopsis) (LOC461557), mRNA
          Length = 1638

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 645 tcatggacatttaagtgcag 664
           ||||||||||||||||||||
Sbjct: 852 tcatggacatttaagtgcag 871
to top
>ref|NM_002669.2| Homo sapiens pleiotropic regulator 1 (PRL1 homolog, Arabidopsis)
           (PLRG1), mRNA
          Length = 1797

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 645 tcatggacatttaagtgcag 664
           ||||||||||||||||||||
Sbjct: 915 tcatggacatttaagtgcag 934
to top
>gb|AC005065.1| Homo sapiens BAC clone CTB-114B19 from 7, complete sequence
          Length = 83928

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 246   ttgctcttttttgttgctttttgt 269
             ||||| ||||||||||||||||||
Sbjct: 16348 ttgcttttttttgttgctttttgt 16371
to top
>emb|CR376724.12| Zebrafish DNA sequence from clone DKEY-174A16 in linkage group 3,
              complete sequence
          Length = 168199

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 544    aaatgaattgtcttcataat 563
              ||||||||||||||||||||
Sbjct: 123344 aaatgaattgtcttcataat 123325
to top
>gb|AC024158.5| Homo sapiens chromosome 3 clone RP11-245A6 map 3p, complete sequence
          Length = 162042

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 542   ccaaatgaattgtcttcataataa 565
             |||||||||||||||| |||||||
Sbjct: 90797 ccaaatgaattgtcttgataataa 90820
to top
>gb|AC125224.3| Mus musculus BAC clone RP23-33N8 from 17, complete sequence
          Length = 195968

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 244   aattgctcttttttgttgcttttt 267
             |||||||||||||||||| |||||
Sbjct: 27357 aattgctcttttttgttgtttttt 27380
to top
>emb|CR847503.8| Zebrafish DNA sequence from clone DKEY-20D21 in linkage group 8, complete
              sequence
          Length = 217514

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 544    aaatgaattgtcttcataat 563
              ||||||||||||||||||||
Sbjct: 142503 aaatgaattgtcttcataat 142522
to top
>emb|AL645820.1| Human DNA sequence from clone RP1-138O17 on chromosome X, complete
            sequence
          Length = 125787

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 510  ccttcaccagaagcagattc 529
            ||||||||||||||||||||
Sbjct: 6608 ccttcaccagaagcagattc 6627
to top
>emb|AL445523.11| Human DNA sequence from clone RP11-231N9 on chromosome X Contains a
             karyopherin alpha 2 (RAG cohort 1, importin alpha 1)
             (KPNA2) pseudogene and a chaperonin containing TCP1,
             subunit 4 (delta) (CCT4) pseudogene, complete sequence
          Length = 157946

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 250   tcttttttgttgctttttgt 269
             ||||||||||||||||||||
Sbjct: 18549 tcttttttgttgctttttgt 18568
to top
>emb|AL138878.10| Human DNA sequence from clone RP11-288G3 on chromosome 6 Contains the
             3' end of the RIOK1 gene for RIO kinase 1 (yeast), a
             hetergeneous riboprotein L (HNRNP L) pseudogene, a
             ribosomal protein S26 pseudogene and a isocitrate
             dehydrogenase 1 (IDH1) pseudogene, complete sequence
          Length = 128320

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 510   ccttcaccagaagcagattc 529
             ||||||||||||||||||||
Sbjct: 91413 ccttcaccagaagcagattc 91432
to top
>gb|DQ088854.1| Uncultured bacterium eBACmed18B02 probable aminopeptidase and
           predicted DNA helicase II genes, complete cds
          Length = 3894

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 564 aaccaggttcattgcttacaatcatgcc 591
           ||||||||||||| |||| |||||||||
Sbjct: 892 aaccaggttcattacttaaaatcatgcc 919
to top
>emb|CR388175.9| Zebrafish DNA sequence from clone DKEY-63B1 in linkage group 20, complete
              sequence
          Length = 207204

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 349    ggaaaccttttcccaaactt 368
              ||||||||||||||||||||
Sbjct: 197253 ggaaaccttttcccaaactt 197234
to top
>emb|CR620440.1| full-length cDNA clone CS0DJ011YL18 of T cells (Jurkat cell line)
           Cot 10-normalized of Homo sapiens (human)
          Length = 1761

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 645 tcatggacatttaagtgcag 664
           ||||||||||||||||||||
Sbjct: 928 tcatggacatttaagtgcag 947
to top
>emb|CR619619.1| full-length cDNA clone CS0DI056YC16 of Placenta Cot 25-normalized
           of Homo sapiens (human)
          Length = 1661

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 645 tcatggacatttaagtgcag 664
           ||||||||||||||||||||
Sbjct: 821 tcatggacatttaagtgcag 840
to top
>emb|CR618318.1| full-length cDNA clone CS0DI014YL17 of Placenta Cot 25-normalized
           of Homo sapiens (human)
          Length = 1759

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 645 tcatggacatttaagtgcag 664
           ||||||||||||||||||||
Sbjct: 921 tcatggacatttaagtgcag 940
to top
>emb|CR615444.1| full-length cDNA clone CS0DC015YI15 of Neuroblastoma Cot
           25-normalized of Homo sapiens (human)
          Length = 1752

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 645 tcatggacatttaagtgcag 664
           ||||||||||||||||||||
Sbjct: 913 tcatggacatttaagtgcag 932
to top
>emb|CR614678.1| full-length cDNA clone CS0DF001YF15 of Fetal brain of Homo sapiens
           (human)
          Length = 1752

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 645 tcatggacatttaagtgcag 664
           ||||||||||||||||||||
Sbjct: 901 tcatggacatttaagtgcag 920
to top
>emb|CR606429.1| full-length cDNA clone CS0DI014YD19 of Placenta Cot 25-normalized
           of Homo sapiens (human)
          Length = 1759

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 645 tcatggacatttaagtgcag 664
           ||||||||||||||||||||
Sbjct: 921 tcatggacatttaagtgcag 940
to top
>emb|CR605729.1| full-length cDNA clone CS0DD003YM19 of Neuroblastoma Cot
           50-normalized of Homo sapiens (human)
          Length = 1805

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 645 tcatggacatttaagtgcag 664
           ||||||||||||||||||||
Sbjct: 955 tcatggacatttaagtgcag 974
to top
>emb|CR601633.1| full-length cDNA clone CS0DB004YO02 of Neuroblastoma Cot
           10-normalized of Homo sapiens (human)
          Length = 1758

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 645 tcatggacatttaagtgcag 664
           ||||||||||||||||||||
Sbjct: 913 tcatggacatttaagtgcag 932
to top
>emb|CR600370.1| full-length cDNA clone CS0DA005YO21 of Neuroblastoma of Homo
           sapiens (human)
          Length = 1664

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 645 tcatggacatttaagtgcag 664
           ||||||||||||||||||||
Sbjct: 924 tcatggacatttaagtgcag 943
to top
>emb|CR598423.1| full-length cDNA clone CS0DD006YN22 of Neuroblastoma Cot
           50-normalized of Homo sapiens (human)
          Length = 1308

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 645 tcatggacatttaagtgcag 664
           ||||||||||||||||||||
Sbjct: 563 tcatggacatttaagtgcag 582
to top
>dbj|AK002108.1| Homo sapiens cDNA FLJ11246 fis, clone PLACE1008650, highly similar
           to Homo sapiens pleiotropic regulator 1 mRNA
          Length = 1711

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 645 tcatggacatttaagtgcag 664
           ||||||||||||||||||||
Sbjct: 952 tcatggacatttaagtgcag 971
to top
>gb|AC100844.2| Homo sapiens chromosome 18, clone RP11-659F24, complete sequence
          Length = 165879

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 510   ccttcaccagaagcagattc 529
             ||||||||||||||||||||
Sbjct: 48045 ccttcaccagaagcagattc 48064
to top
>gb|AC107385.4| Homo sapiens BAC clone RP11-158C21 from 4, complete sequence
          Length = 156442

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 645   tcatggacatttaagtgcag 664
             ||||||||||||||||||||
Sbjct: 16419 tcatggacatttaagtgcag 16400
to top
>gb|AC021561.8| Homo sapiens chromosome 18, clone RP11-766D3, complete sequence
          Length = 174508

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 510    ccttcaccagaagcagattc 529
              ||||||||||||||||||||
Sbjct: 166283 ccttcaccagaagcagattc 166302
to top
>gb|DQ103595.1| Arabidopsis arenosa clone BAC 28N14, complete sequence
          Length = 132056

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 510   ccttcaccagaagcagattc 529
             ||||||||||||||||||||
Sbjct: 39643 ccttcaccagaagcagattc 39624
to top
>gb|DQ103594.1| Capsella rubella clone BAC 8F1, complete sequence
          Length = 83679

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 510   ccttcaccagaagcagattc 529
             ||||||||||||||||||||
Sbjct: 19860 ccttcaccagaagcagattc 19841
to top
>ref|XM_936260.1| PREDICTED: Homo sapiens hypothetical protein LOC642117 (LOC642117),
           mRNA
          Length = 213

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 510 ccttcaccagaagcagattc 529
           ||||||||||||||||||||
Sbjct: 205 ccttcaccagaagcagattc 186
to top
>ref|XM_926850.1| PREDICTED: Homo sapiens hypothetical protein LOC643545 (LOC643545),
           mRNA
          Length = 213

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 510 ccttcaccagaagcagattc 529
           ||||||||||||||||||||
Sbjct: 205 ccttcaccagaagcagattc 186
to top
>dbj|AB179186.1| Macaca fascicularis testis cDNA clone: QtsA-14439, similar to human
           pleiotropic regulator 1 (PRL1homolog,
           Arabidopsis)(PLRG1), mRNA, RefSeq: NM_002669.1
          Length = 1770

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 645 tcatggacatttaagtgcag 664
           ||||||||||||||||||||
Sbjct: 938 tcatggacatttaagtgcag 957
to top
>gb|AF001905.1|AF001905 Homo sapiens cosmids E079, B0920 and A8 from Xq25 X-linked
              lymphoproliferative disease gene candidate region, complete
              sequence
          Length = 197620

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 510    ccttcaccagaagcagattc 529
              ||||||||||||||||||||
Sbjct: 119180 ccttcaccagaagcagattc 119161
to top
>gb|AC158511.2| Mus musculus BAC clone RP24-242G2 from chromosome 13, complete sequence
          Length = 143388

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 250    tcttttttgttgctttttgt 269
              ||||||||||||||||||||
Sbjct: 106201 tcttttttgttgctttttgt 106220
to top
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 253      tttttgttgctttttgtcatgttg 276
                |||||| |||||||||||||||||
Sbjct: 21248864 tttttgctgctttttgtcatgttg 21248887
to top
>gb|AC090669.9| Homo sapiens 12 BAC RP11-780K2 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 113027

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 511   cttcaccagaagcagattct 530
             ||||||||||||||||||||
Sbjct: 12379 cttcaccagaagcagattct 12398
to top
>gb|AC016562.7| Homo sapiens chromosome 5 clone CTC-484A9, complete sequence
          Length = 185774

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 511   cttcaccagaagcagattct 530
             ||||||||||||||||||||
Sbjct: 84179 cttcaccagaagcagattct 84198
to top
>dbj|AP003714.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0656E03
          Length = 181786

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 253   tttttgttgctttttgtcatgttg 276
             |||||| |||||||||||||||||
Sbjct: 44240 tttttgctgctttttgtcatgttg 44263
to top
>emb|CR391988.6| Zebrafish DNA sequence from clone CH211-107O23 in linkage group 18,
            complete sequence
          Length = 60360

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 448  aaaagttagtttctcaaagc 467
            ||||||||||||||||||||
Sbjct: 2526 aaaagttagtttctcaaagc 2507
to top
>emb|BX901926.19| Zebrafish DNA sequence from clone CH211-195N20 in linkage group 1,
              complete sequence
          Length = 204799

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 252    ttttttgttgctttttgtca 271
              ||||||||||||||||||||
Sbjct: 129082 ttttttgttgctttttgtca 129063
to top
>gb|BC020786.1| Homo sapiens pleiotropic regulator 1 (PRL1 homolog, Arabidopsis),
           mRNA (cDNA clone MGC:22797 IMAGE:4809482), complete cds
          Length = 1707

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 645 tcatggacatttaagtgcag 664
           ||||||||||||||||||||
Sbjct: 914 tcatggacatttaagtgcag 933
to top
>gb|AF044333.1|AF044333 Homo sapiens pleiotropic regulator 1 (PLRG1) mRNA, complete cds
          Length = 1548

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 645 tcatggacatttaagtgcag 664
           ||||||||||||||||||||
Sbjct: 852 tcatggacatttaagtgcag 871
to top
>gb|AC005549.1|AC005549 Homo sapiens chromosome 17, clone hRPK.215_E_13, complete sequence
          Length = 147416

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 99     aaatgaagatgtatgcaaat 118
              ||||||||||||||||||||
Sbjct: 138344 aaatgaagatgtatgcaaat 138363
to top
>gb|BC036046.1| Homo sapiens cDNA clone IMAGE:5273244, containing frame-shift
           errors
          Length = 3330

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 645 tcatggacatttaagtgcag 664
           ||||||||||||||||||||
Sbjct: 940 tcatggacatttaagtgcag 959
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>emb|CT025674.13| Mouse DNA sequence from clone RP24-364I17 on chromosome 13, complete
             sequence
          Length = 117646

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 164   aaaataaaccagcttcaacc 183
             ||||||||||||||||||||
Sbjct: 24552 aaaataaaccagcttcaacc 24571
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>emb|CT030664.5| Mouse DNA sequence from clone RP23-357K7 on chromosome 13, complete
              sequence
          Length = 192064

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 250    tcttttttgttgctttttgt 269
              ||||||||||||||||||||
Sbjct: 164878 tcttttttgttgctttttgt 164897
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>gb|AC124737.5| Mus musculus BAC clone RP23-330K22 from 13, complete sequence
          Length = 188023

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 250    tcttttttgttgctttttgt 269
              ||||||||||||||||||||
Sbjct: 163327 tcttttttgttgctttttgt 163308
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>emb|CT009635.18| Mouse DNA sequence from clone RP23-109E18 on chromosome 17, complete
             sequence
          Length = 216634

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 244   aattgctcttttttgttgcttttt 267
             |||||||||||||||||| |||||
Sbjct: 64488 aattgctcttttttgttgtttttt 64465
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>dbj|AP004499.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT16N13, TM0031,
             complete sequence
          Length = 97191

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 246   ttgctcttttttgttgctttttgt 269
             |||||||| |||||||||||||||
Sbjct: 21220 ttgctcttctttgttgctttttgt 21197
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>emb|Z72519.1|HSJ13817A Human DNA sequence from cosmid J138O17, between markers DXS6791 and
              DXS8038 on chromosome X contains EST CA repeat and an
              endogenous retroviral like element
          Length = 125787

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 510    ccttcaccagaagcagattc 529
              ||||||||||||||||||||
Sbjct: 119180 ccttcaccagaagcagattc 119161
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>emb|AL390025.1| Human DNA sequence from clone RP3-336K20 on chromosome 6 Contains a
             pseudogene similar to hetergeneous riboprotein L (HNRNP
             L), to Ribosomal protein S26, a pseudogene similar to
             isocitrate dehydrogenase (NADP+), STSs and GSSs, complete
             sequence
          Length = 52747

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 510   ccttcaccagaagcagattc 529
             ||||||||||||||||||||
Sbjct: 15828 ccttcaccagaagcagattc 15847


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,295,170
Number of Sequences: 3902068
Number of extensions: 6295170
Number of successful extensions: 125163
Number of sequences better than 10.0: 81
Number of HSP's better than 10.0 without gapping: 81
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 124883
Number of HSP's gapped (non-prelim): 272
length of query: 677
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 654
effective length of database: 17,143,297,704
effective search space: 11211716698416
effective search space used: 11211716698416
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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