Clone Name | rbasd3c07 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | M4K4_MOUSE (P97820) Mitogen-activated protein kinase kinase kina... | 31 | 1.9 | 2 | SYIC_MOUSE (Q8BU30) Isoleucyl-tRNA synthetase, cytoplasmic (EC 6... | 30 | 3.3 |
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>M4K4_MOUSE (P97820) Mitogen-activated protein kinase kinase kinase kinase 4| (EC 2.7.11.1) (MAPK/ERK kinase kinase kinase 4) (MEK kinase kinase 4) (MEKKK 4) (HPK/GCK-like kinase HGK) (Nck-interacting kinase) Length = 1233 Score = 31.2 bits (69), Expect = 1.9 Identities = 23/61 (37%), Positives = 29/61 (47%), Gaps = 12/61 (19%) Frame = -2 Query: 221 LLHVHRQREDAQRAGPPQYQ----------EPRPQDDRIH--REVKWILHRGYIASLLGN 78 LLH HR+ Q+ PPQ Q EP+P D REV+W ++ASL N Sbjct: 492 LLHDHRRPHAQQQPPPPQQQDRSKPSFHAPEPKPHYDPADRAREVQW----SHLASLKNN 547 Query: 77 V 75 V Sbjct: 548 V 548
>SYIC_MOUSE (Q8BU30) Isoleucyl-tRNA synthetase, cytoplasmic (EC 6.1.1.5)| (Isoleucine--tRNA ligase) (IleRS) (IRS) Length = 1262 Score = 30.4 bits (67), Expect = 3.3 Identities = 14/31 (45%), Positives = 19/31 (61%) Frame = +1 Query: 7 VFLTSALTENSN*VATSFHTHPWTFPSNEAI 99 VF+T L E+ N ++ T PWT PSN A+ Sbjct: 206 VFVTFPLEEDENTSLVAWTTTPWTLPSNLAL 236 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 57,289,618 Number of Sequences: 219361 Number of extensions: 972335 Number of successful extensions: 3801 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 3514 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3800 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4200495993 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)