ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd3c07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|AJ310379.1|HVU310379 Hordeum vulgare mRNA for putative nucle... 823 0.0
2gb|AC121365.2| Oryza sativa (japonica cultivar-group) chromosome... 155 2e-34
3gb|AC111015.2| Oryza sativa (japonica cultivar-group) chromosome... 155 2e-34
4dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 155 2e-34
5dbj|AK109325.1| Oryza sativa (japonica cultivar-group) cDNA clon... 155 2e-34
6ref|XM_475741.1| Oryza sativa (japonica cultivar-group), predic... 153 7e-34
7gb|AY112488.1| Zea mays CL43678_1 mRNA sequence 109 9e-21
8gb|AC132491.2| Oryza sativa (japonica cultivar-group) chromosome... 54 5e-04
9ref|XM_477770.1| Oryza sativa (japonica cultivar-group), mRNA 46 0.12
10dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.12
11dbj|AP003830.3| Oryza sativa (japonica cultivar-group) genomic D... 46 0.12
12gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 44 0.47
13dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.47
14dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.47
15gb|AC134237.2| Oryza sativa (japonica cultivar-group) chromosome... 44 0.47
16gb|AC121490.2| Oryza sativa (japonica cultivar-group) chromosome... 44 0.47
17dbj|AP004784.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.47
18dbj|AK119700.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.47
19dbj|AK107900.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.47
20dbj|AK063497.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.47
21emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome 44 0.47
22ref|NM_001018111.1| Homo sapiens podocalyxin-like (PODXL), trans... 42 1.8
23ref|NM_005397.2| Homo sapiens podocalyxin-like (PODXL), transcri... 42 1.8
24emb|Z78205.1|BHT1UL Bovine herpesvirus type 1 UL22-35 genes 42 1.8
25emb|AJ004801.1|BHV1CGEN Bovine herpesvirus type 1.1 complete genome 42 1.8
26dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.8
27dbj|AK223573.1| Homo sapiens mRNA for podocalyxin-like precursor... 42 1.8
28gb|BC093730.1| Homo sapiens podocalyxin-like, mRNA (cDNA clone M... 42 1.8
29gb|AC008264.10|AC008264 Homo sapiens chromosome 7 clone RP11-180... 42 1.8
30gb|BC042466.1| Homo sapiens, Similar to podocalyxin-like, clone ... 42 1.8
31emb|X94677.1|BHV1ULGNS Bovine herpesvirus type 1 genes for UL[27... 42 1.8
32gb|BC112035.1| Homo sapiens podocalyxin-like, transcript variant... 42 1.8
33gb|AY395058.1| Schistosoma mansoni ecdysone-induced protein E78 ... 42 1.8
34emb|AL663008.3|OSJN00209 Oryza sativa genomic DNA, chromosome 4,... 42 1.8
35gb|U97519.1|HSU97519 Homo sapiens podocalyxin-like protein mRNA,... 42 1.8
36ref|XM_550259.1| Oryza sativa (japonica cultivar-group), mRNA 40 7.3
37ref|XM_469110.1| Oryza sativa (japonica cultivar-group), mRNA 40 7.3
38ref|NM_183749.1| Oryza sativa (japonica cultivar-group), predic... 40 7.3
39gb|AC159423.1| Trypanosoma brucei chromosome 8 clone RPCI93-26E1... 40 7.3
40gb|AY022735.1| Oryza sativa microsatellite MRG5060 containing (C... 40 7.3
41gb|AC112209.4| Oryza sativa (japonica cultivar-group) chromosome... 40 7.3
42gb|AC159405.1| Trypanosoma brucei chromosome 8 clone RPCI93-11J1... 40 7.3
43gb|CP000071.1| Trypanosoma brucei chromosome 8, complete sequence 40 7.3
44ref|XM_365538.1| Magnaporthe grisea 70-15 hypothetical protein (... 40 7.3
45ref|XM_955849.1| Neurospora crassa OR74A hypothetical protein (N... 40 7.3
46ref|XM_326877.1| Neurospora crassa OR74A hypothetical protein (N... 40 7.3
47gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete... 40 7.3
48ref|XM_849855.1| PREDICTED: Canis familiaris similar to solute c... 40 7.3
49ref|XM_818417.1| Trypanosoma brucei TREU927 clone RPCI93-11J15 h... 40 7.3
50emb|CR555306.1| Azoarcus sp. EbN1 complete genome 40 7.3
51emb|AL451020.1|NC15E11 Neurospora crassa DNA linkage group V Cos... 40 7.3
52gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome 40 7.3
53gb|AE012064.1| Xanthomonas axonopodis pv. citri str. 306, secti... 40 7.3
54dbj|AK132685.1| Mus musculus adult male testis cDNA, RIKEN full-... 40 7.3
55gb|DQ399653.1| Nonomuraea longicatena K-252a biosynthesis gene c... 40 7.3
56gb|AF330255.1|AF330255 Hordeum vulgare possible membrane protein... 40 7.3
57dbj|AK020792.1| Mus musculus 10 days neonate cortex cDNA, RIKEN ... 40 7.3
58dbj|AK078475.1| Mus musculus 12 days embryo female mullerian duc... 40 7.3
59dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.3
60dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.3
61dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.3
62dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.3
63dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.3
64gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome 40 7.3
65dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 40 7.3
66gb|AC135600.3| Oryza sativa chromosome 3 BAC OSJNBb0047K21 genom... 40 7.3
67gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome 40 7.3
68dbj|AP005862.2| Oryza sativa (japonica cultivar-group) genomic D... 40 7.3
69dbj|AP003339.4| Oryza sativa (japonica cultivar-group) genomic D... 40 7.3
70dbj|AP004740.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.3
71dbj|AP003208.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.3
72dbj|AP003793.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.3
73dbj|AP003414.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.3
74dbj|AP004735.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.3
75dbj|AP003921.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.3
76dbj|AP004734.2| Oryza sativa (japonica cultivar-group) genomic D... 40 7.3
77dbj|AP005740.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.3
78dbj|AK120658.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.3
79dbj|AK072969.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.3
80gb|AC151669.5| Mus musculus chromosome 5, clone RP23-44L13, comp... 40 7.3
81dbj|AP002912.2| Oryza sativa (japonica cultivar-group) genomic D... 40 7.3
82gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 7.3
83gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 7.3
84emb|AL732649.3|CNS08C9O Oryza sativa chromosome 12, . BAC OSJNBb... 40 7.3
85emb|AL954852.5|CNS08CD6 Oryza sativa chromosome 12, . BAC OJ1573... 40 7.3
86emb|CR382130.1| Yarrowia lipolytica chromosome D of strain CLIB1... 40 7.3
87emb|AJ233625.1|OCU233625 Oryctolagus cuniculus endogenous retrov... 40 7.3
88gb|L23501.1|HUMKPRWI Homo sapiens Prader-Willi chromosome DNA fr... 40 7.3 
>emb|AJ310379.1|HVU310379 Hordeum vulgare mRNA for putative nuclear protein (s40 gene)
          Length = 417

 Score =  823 bits (415), Expect = 0.0
 Identities = 415/415 (100%)
 Strand = Plus / Minus

                                                                       
Query: 122 tcacttctcgatgaatccggtcatcctgaggacgaggttcctgatattgcggaggtcccg 181
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 tcacttctcgatgaatccggtcatcctgaggacgaggttcctgatattgcggaggtcccg 358

                                                                       
Query: 182 ccctttgagcgtcctccctttgccggtgcacatggagtaggccgccgtcgacctcccggc 241
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 ccctttgagcgtcctccctttgccggtgcacatggagtaggccgccgtcgacctcccggc 298

                                                                       
Query: 242 gagcctccgccgtcgctcggccaggacgtggggcggcacgttcctcttcgcgtcgttggt 301
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 297 gagcctccgccgtcgctcggccaggacgtggggcggcacgttcctcttcgcgtcgttggt 238

                                                                       
Query: 302 acatcggacgtcgccgtcgctgcagtcgtcgttgccactgccgctcccgtcggacgacgc 361
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 237 acatcggacgtcgccgtcgctgcagtcgtcgttgccactgccgctcccgtcggacgacgc 178

                                                                       
Query: 362 cgtccaggatcgagaccgccgcttccggagaggcacgaggaccggggcagacagctccgg 421
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 177 cgtccaggatcgagaccgccgcttccggagaggcacgaggaccggggcagacagctccgg 118

                                                                       
Query: 422 cggggacaccttggcgatgtctccgtcgacgttgctgccgtcgtcgccgtcgcggcggtg 481
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 117 cggggacaccttggcgatgtctccgtcgacgttgctgccgtcgtcgccgtcgcggcggtg 58

                                                                  
Query: 482 ctcggagttgtagtgtggccagaggacgtcggcttcttggagctcctgatgatcc 536
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 57  ctcggagttgtagtgtggccagaggacgtcggcttcttggagctcctgatgatcc 3
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>gb|AC121365.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0053E05, complete sequence
          Length = 196284

 Score =  155 bits (78), Expect = 2e-34
 Identities = 102/110 (92%)
 Strand = Plus / Minus

                                                                         
Query: 121   ttcacttctcgatgaatccggtcatcctgaggacgaggttcctgatattgcggaggtccc 180
             |||| |||||||||||||||||||||  |||||||||||||||||  |||||||||||||
Sbjct: 13006 ttcatttctcgatgaatccggtcatctggaggacgaggttcctgacgttgcggaggtccc 12947

                                                               
Query: 181   gccctttgagcgtcctccctttgccggtgcacatggagtaggccgccgtc 230
             ||||||||||||||||||| ||||||| |||||||||||| |||||||||
Sbjct: 12946 gccctttgagcgtcctccccttgccggcgcacatggagtacgccgccgtc 12897
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>gb|AC111015.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1131_E09,
             complete sequence
          Length = 94399

 Score =  155 bits (78), Expect = 2e-34
 Identities = 102/110 (92%)
 Strand = Plus / Minus

                                                                         
Query: 121   ttcacttctcgatgaatccggtcatcctgaggacgaggttcctgatattgcggaggtccc 180
             |||| |||||||||||||||||||||  |||||||||||||||||  |||||||||||||
Sbjct: 79298 ttcatttctcgatgaatccggtcatctggaggacgaggttcctgacgttgcggaggtccc 79239

                                                               
Query: 181   gccctttgagcgtcctccctttgccggtgcacatggagtaggccgccgtc 230
             ||||||||||||||||||| ||||||| |||||||||||| |||||||||
Sbjct: 79238 gccctttgagcgtcctccccttgccggcgcacatggagtacgccgccgtc 79189
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score =  155 bits (78), Expect = 2e-34
 Identities = 102/110 (92%)
 Strand = Plus / Minus

                                                                            
Query: 121      ttcacttctcgatgaatccggtcatcctgaggacgaggttcctgatattgcggaggtccc 180
                |||| |||||||||||||||||||||  |||||||||||||||||  |||||||||||||
Sbjct: 26161958 ttcatttctcgatgaatccggtcatctggaggacgaggttcctgacgttgcggaggtccc 26161899

                                                                  
Query: 181      gccctttgagcgtcctccctttgccggtgcacatggagtaggccgccgtc 230
                ||||||||||||||||||| ||||||| |||||||||||| |||||||||
Sbjct: 26161898 gccctttgagcgtcctccccttgccggcgcacatggagtacgccgccgtc 26161849



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 30/31 (96%)
 Strand = Plus / Minus

                                               
Query: 498      ggccagaggacgtcggcttcttggagctcct 528
                ||||||||||||||||||||||||| |||||
Sbjct: 25548306 ggccagaggacgtcggcttcttggaactcct 25548276
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>dbj|AK109325.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-188-H07, full
           insert sequence
          Length = 744

 Score =  155 bits (78), Expect = 2e-34
 Identities = 102/110 (92%)
 Strand = Plus / Minus

                                                                       
Query: 121 ttcacttctcgatgaatccggtcatcctgaggacgaggttcctgatattgcggaggtccc 180
           |||| |||||||||||||||||||||  |||||||||||||||||  |||||||||||||
Sbjct: 475 ttcatttctcgatgaatccggtcatctggaggacgaggttcctgacgttgcggaggtccc 416

                                                             
Query: 181 gccctttgagcgtcctccctttgccggtgcacatggagtaggccgccgtc 230
           ||||||||||||||||||| ||||||| |||||||||||| |||||||||
Sbjct: 415 gccctttgagcgtcctccccttgccggcgcacatggagtacgccgccgtc 366
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>ref|XM_475741.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 429

 Score =  153 bits (77), Expect = 7e-34
 Identities = 98/105 (93%)
 Strand = Plus / Minus

                                                                       
Query: 126 ttctcgatgaatccggtcatcctgaggacgaggttcctgatattgcggaggtcccgccct 185
           |||||||||||||||||||||  |||||||||||||||||  ||||||||||||||||||
Sbjct: 425 ttctcgatgaatccggtcatctggaggacgaggttcctgacgttgcggaggtcccgccct 366

                                                        
Query: 186 ttgagcgtcctccctttgccggtgcacatggagtaggccgccgtc 230
           |||||||||||||| ||||||| |||||||||||| |||||||||
Sbjct: 365 ttgagcgtcctccccttgccggcgcacatggagtacgccgccgtc 321
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>gb|AY112488.1| Zea mays CL43678_1 mRNA sequence
          Length = 595

 Score =  109 bits (55), Expect = 9e-21
 Identities = 91/103 (88%)
 Strand = Plus / Plus

                                                                       
Query: 128 ctcgatgaatccggtcatcctgaggacgaggttcctgatattgcggaggtcccgcccttt 187
           ||||||||| || |||||| |||||||||||| || ||  | ||||||||| ||||||||
Sbjct: 248 ctcgatgaagcctgtcatcttgaggacgaggtcccggacgtcgcggaggtcgcgcccttt 307

                                                      
Query: 188 gagcgtcctccctttgccggtgcacatggagtaggccgccgtc 230
           |||||||||||| ||||| | ||||||||||||||||||||||
Sbjct: 308 gagcgtcctccccttgccagcgcacatggagtaggccgccgtc 350
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>gb|AC132491.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0599F04,
             complete sequence
          Length = 169073

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 30/31 (96%)
 Strand = Plus / Minus

                                            
Query: 498   ggccagaggacgtcggcttcttggagctcct 528
             ||||||||||||||||||||||||| |||||
Sbjct: 64713 ggccagaggacgtcggcttcttggaactcct 64683
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>ref|XM_477770.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 474

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                          
Query: 310 cgtcgccgtcgctgcagtcgtcgttgccact 340
           ||||||||||||| |||||||||| ||||||
Sbjct: 110 cgtcgccgtcgctccagtcgtcgtcgccact 80
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                               
Query: 310      cgtcgccgtcgctgcagtcgtcgttgccact 340
                ||||||||||||| |||||||||| ||||||
Sbjct: 14042424 cgtcgccgtcgctccagtcgtcgtcgccact 14042394
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>dbj|AP003830.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1423_A11
          Length = 98377

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                            
Query: 310   cgtcgccgtcgctgcagtcgtcgttgccact 340
             ||||||||||||| |||||||||| ||||||
Sbjct: 18383 cgtcgccgtcgctccagtcgtcgtcgccact 18353
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                            
Query: 170    gcggaggtcccgccctttgagcgtcctccc 199
              ||||||||| ||||| ||||||||||||||
Sbjct: 760077 gcggaggtcgcgccccttgagcgtcctccc 760048



 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 310      cgtcgccgtcgctgcagtcgtcgt 333
                ||||||||||||| ||||||||||
Sbjct: 25509304 cgtcgccgtcgctccagtcgtcgt 25509327
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                          
Query: 460      cgtcgtcgccgtcgcggcggtgctcg 485
                |||||||||||| |||||||||||||
Sbjct: 13229356 cgtcgtcgccgtggcggcggtgctcg 13229381



 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 310      cgtcgccgtcgctgcagtcgtcgt 333
                ||||||||||||| ||||||||||
Sbjct: 15954056 cgtcgccgtcgctccagtcgtcgt 15954079



 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 455     gctgccgtcgtcgccgtcgc 474
               ||||||||||||||||||||
Sbjct: 8505803 gctgccgtcgtcgccgtcgc 8505822
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3,
              complete sequence
          Length = 36192742

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                            
Query: 170    gcggaggtcccgccctttgagcgtcctccc 199
              ||||||||| ||||| ||||||||||||||
Sbjct: 760075 gcggaggtcgcgccccttgagcgtcctccc 760046



 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 310      cgtcgccgtcgctgcagtcgtcgt 333
                ||||||||||||| ||||||||||
Sbjct: 25600613 cgtcgccgtcgctccagtcgtcgt 25600636
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>gb|AC134237.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBa0090O10, complete sequence
          Length = 162132

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                           
Query: 170   gcggaggtcccgccctttgagcgtcctccc 199
             ||||||||| ||||| ||||||||||||||
Sbjct: 55622 gcggaggtcgcgccccttgagcgtcctccc 55593
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>gb|AC121490.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0005F16,
              complete sequence
          Length = 160053

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                            
Query: 170    gcggaggtcccgccctttgagcgtcctccc 199
              ||||||||| ||||| ||||||||||||||
Sbjct: 145958 gcggaggtcgcgccccttgagcgtcctccc 145929
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>dbj|AP004784.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
              clone:OSJNBa0012F14
          Length = 168629

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 460    cgtcgtcgccgtcgcggcggtgctcg 485
              |||||||||||| |||||||||||||
Sbjct: 146544 cgtcgtcgccgtggcggcggtgctcg 146569
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>dbj|AK119700.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-157-D07, full
           insert sequence
          Length = 777

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 170 gcggaggtcccgccctttgagcgtcctccc 199
           ||||||||| ||||| ||||||||||||||
Sbjct: 655 gcggaggtcgcgccccttgagcgtcctccc 626
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>dbj|AK107900.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-134-F07, full
           insert sequence
          Length = 804

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 170 gcggaggtcccgccctttgagcgtcctccc 199
           ||||||||| ||||| ||||||||||||||
Sbjct: 655 gcggaggtcgcgccccttgagcgtcctccc 626
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>dbj|AK063497.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-116-D06, full
           insert sequence
          Length = 1439

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 460 cgtcgtcgccgtcgcggcggtgctcg 485
           |||||||||||| |||||||||||||
Sbjct: 375 cgtcgtcgccgtggcggcggtgctcg 400
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>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome
          Length = 2595221

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                         
Query: 451     cgttgctgccgtcgtcgccgtcgcgg 476
               |||||||| |||||||||||||||||
Sbjct: 1133223 cgttgctgtcgtcgtcgccgtcgcgg 1133198
to top
>ref|NM_001018111.1| Homo sapiens podocalyxin-like (PODXL), transcript variant 1, mRNA
          Length = 5999

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 454 tgctgccgtcgtcgccgtcgc 474
           |||||||||||||||||||||
Sbjct: 306 tgctgccgtcgtcgccgtcgc 326
to top
>ref|NM_005397.2| Homo sapiens podocalyxin-like (PODXL), transcript variant 2, mRNA
          Length = 5903

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 454 tgctgccgtcgtcgccgtcgc 474
           |||||||||||||||||||||
Sbjct: 306 tgctgccgtcgtcgccgtcgc 326
to top
>emb|Z78205.1|BHT1UL Bovine herpesvirus type 1 UL22-35 genes
          Length = 37000

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 211   acatggagtaggccgccgtcgacct 235
             |||||||| ||||||||||||||||
Sbjct: 17553 acatggagaaggccgccgtcgacct 17529
to top
>emb|AJ004801.1|BHV1CGEN Bovine herpesvirus type 1.1 complete genome
          Length = 135301

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 211   acatggagtaggccgccgtcgacct 235
             |||||||| ||||||||||||||||
Sbjct: 48353 acatggagaaggccgccgtcgacct 48329
to top
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 313      cgccgtcgctgcagtcgtcgttgcc 337
                |||||||||| ||||||||||||||
Sbjct: 11615952 cgccgtcgctccagtcgtcgttgcc 11615976
to top
>dbj|AK223573.1| Homo sapiens mRNA for podocalyxin-like precursor variant, clone:
           FCC129D02
          Length = 2056

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 454 tgctgccgtcgtcgccgtcgc 474
           |||||||||||||||||||||
Sbjct: 306 tgctgccgtcgtcgccgtcgc 326
to top
>gb|BC093730.1| Homo sapiens podocalyxin-like, mRNA (cDNA clone MGC:120765
           IMAGE:7939575), complete cds
          Length = 1672

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 454 tgctgccgtcgtcgccgtcgc 474
           |||||||||||||||||||||
Sbjct: 76  tgctgccgtcgtcgccgtcgc 96
to top
>gb|AC008264.10|AC008264 Homo sapiens chromosome 7 clone RP11-180C16, complete sequence
          Length = 162694

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 454   tgctgccgtcgtcgccgtcgc 474
             |||||||||||||||||||||
Sbjct: 65765 tgctgccgtcgtcgccgtcgc 65745
to top
>gb|BC042466.1| Homo sapiens, Similar to podocalyxin-like, clone IMAGE:5172924,
           mRNA
          Length = 6199

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 454 tgctgccgtcgtcgccgtcgc 474
           |||||||||||||||||||||
Sbjct: 260 tgctgccgtcgtcgccgtcgc 280
to top
>emb|X94677.1|BHV1ULGNS Bovine herpesvirus type 1 genes for UL[27,28,29,30,31]
          Length = 10500

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 211  acatggagtaggccgccgtcgacct 235
            |||||||| ||||||||||||||||
Sbjct: 3277 acatggagaaggccgccgtcgacct 3253
to top
>gb|BC112035.1| Homo sapiens podocalyxin-like, transcript variant 2, mRNA (cDNA
           clone MGC:138240 IMAGE:8327503), complete cds
          Length = 1684

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 454 tgctgccgtcgtcgccgtcgc 474
           |||||||||||||||||||||
Sbjct: 88  tgctgccgtcgtcgccgtcgc 108
to top
>gb|AY395058.1| Schistosoma mansoni ecdysone-induced protein E78 (E78) mRNA, complete
            cds
          Length = 1864

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 329  gtcgttgccactgccgctccc 349
            |||||||||||||||||||||
Sbjct: 1385 gtcgttgccactgccgctccc 1365
to top
>emb|AL663008.3|OSJN00209 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0058J09,
             complete sequence
          Length = 164911

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 313   cgccgtcgctgcagtcgtcgttgcc 337
             |||||||||| ||||||||||||||
Sbjct: 98962 cgccgtcgctccagtcgtcgttgcc 98986
to top
>gb|U97519.1|HSU97519 Homo sapiens podocalyxin-like protein mRNA, complete cds
          Length = 5869

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 454 tgctgccgtcgtcgccgtcgc 474
           |||||||||||||||||||||
Sbjct: 306 tgctgccgtcgtcgccgtcgc 326
to top
>ref|XM_550259.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1929

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 460 cgtcgtcgccgtcgcggcgg 479
           ||||||||||||||||||||
Sbjct: 118 cgtcgtcgccgtcgcggcgg 99
to top
>ref|XM_469110.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 357

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 310 cgtcgccgtcgctgcagtcgtcgt 333
           ||||||||||||| ||||||||||
Sbjct: 307 cgtcgccgtcgctccagtcgtcgt 284
to top
>ref|NM_183749.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 648

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 310 cgtcgccgtcgctgcagtcgtcgttgcc 337
           ||||||||||||| | ||||||||||||
Sbjct: 552 cgtcgccgtcgctccggtcgtcgttgcc 525
to top
>gb|AC159423.1| Trypanosoma brucei chromosome 8 clone RPCI93-26E13, complete sequence
          Length = 147087

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 279    acgttcctcttcgcgtcgtt 298
              ||||||||||||||||||||
Sbjct: 125414 acgttcctcttcgcgtcgtt 125395
to top
>gb|AY022735.1| Oryza sativa microsatellite MRG5060 containing (CCT)X8, genomic
           sequence
          Length = 224

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 460 cgtcgtcgccgtcgcggcgg 479
           ||||||||||||||||||||
Sbjct: 22  cgtcgtcgccgtcgcggcgg 3
to top
>gb|AC112209.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0030I09 map C83B, complete sequence
          Length = 123477

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 172   ggaggtcccgccctttgagcgtcctccc 199
             ||||||| ||||| ||||||||||||||
Sbjct: 99238 ggaggtcgcgccccttgagcgtcctccc 99265
to top
>gb|AC159405.1| Trypanosoma brucei chromosome 8 clone RPCI93-11J15, complete sequence
          Length = 164873

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 279    acgttcctcttcgcgtcgtt 298
              ||||||||||||||||||||
Sbjct: 128027 acgttcctcttcgcgtcgtt 128046
to top
>gb|CP000071.1| Trypanosoma brucei chromosome 8, complete sequence
          Length = 2481190

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 279     acgttcctcttcgcgtcgtt 298
               ||||||||||||||||||||
Sbjct: 1743163 acgttcctcttcgcgtcgtt 1743144
to top
>ref|XM_365538.1| Magnaporthe grisea 70-15 hypothetical protein (MG02240.4) partial
           mRNA
          Length = 3444

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 286 tcttcgcgtcgttggtacat 305
           ||||||||||||||||||||
Sbjct: 989 tcttcgcgtcgttggtacat 970
to top
>ref|XM_955849.1| Neurospora crassa OR74A hypothetical protein (NCU01385.1) partial
           mRNA
          Length = 315

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 396 acgaggaccggggcagacag 415
           ||||||||||||||||||||
Sbjct: 280 acgaggaccggggcagacag 299
to top
>ref|XM_326877.1| Neurospora crassa OR74A hypothetical protein (NCU01385.1) partial
           mRNA
          Length = 315

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 396 acgaggaccggggcagacag 415
           ||||||||||||||||||||
Sbjct: 280 acgaggaccggggcagacag 299
to top
>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome
          Length = 6093698

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 462   tcgtcgccgtcgcggcggtg 481
             ||||||||||||||||||||
Sbjct: 52187 tcgtcgccgtcgcggcggtg 52168
to top
>ref|XM_849855.1| PREDICTED: Canis familiaris similar to solute carrier family 39 (zinc
            transporter), member 3 isoform a (LOC612127), mRNA
          Length = 1129

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 272  gggcggcacgttcctcttcg 291
            ||||||||||||||||||||
Sbjct: 991  gggcggcacgttcctcttcg 1010
to top
>ref|XM_818417.1| Trypanosoma brucei TREU927 clone RPCI93-11J15 hypothetical protein
           (Tb927.8.5940) partial mRNA
          Length = 1419

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 279 acgttcctcttcgcgtcgtt 298
           ||||||||||||||||||||
Sbjct: 735 acgttcctcttcgcgtcgtt 716
to top
>emb|CR555306.1| Azoarcus sp. EbN1 complete genome
          Length = 4296230

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 310    cgtcgccgtcgctgcagtcgtcgt 333
              ||||||||||||||| ||||||||
Sbjct: 150477 cgtcgccgtcgctgccgtcgtcgt 150454
to top
>emb|AL451020.1|NC15E11 Neurospora crassa DNA linkage group V Cosmid contig 15E11
          Length = 79133

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 396   acgaggaccggggcagacag 415
             ||||||||||||||||||||
Sbjct: 16736 acgaggaccggggcagacag 16717
to top
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome
          Length = 5513844

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 353     ggacgacgccgtccaggatc 372
               ||||||||||||||||||||
Sbjct: 4359630 ggacgacgccgtccaggatc 4359611
to top
>gb|AE012064.1| Xanthomonas axonopodis pv. citri str. 306,  section 442 of 469 of the
            complete genome
          Length = 10412

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 451  cgttgctgccgtcgtcgccg 470
            ||||||||||||||||||||
Sbjct: 4256 cgttgctgccgtcgtcgccg 4237
to top
>dbj|AK132685.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched
           library, clone:4921526M11 product:G protein-coupled
           receptor kinase 2, groucho gene related (Drosophila),
           full insert sequence
          Length = 2410

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 455 gctgccgtcgtcgccgtcgc 474
           ||||||||||||||||||||
Sbjct: 339 gctgccgtcgtcgccgtcgc 320
to top
>gb|DQ399653.1| Nonomuraea longicatena K-252a biosynthesis gene cluster, complete
            sequence
          Length = 20300

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 459  ccgtcgtcgccgtcgcggcg 478
            ||||||||||||||||||||
Sbjct: 8121 ccgtcgtcgccgtcgcggcg 8102
to top
>gb|AF330255.1|AF330255 Hordeum vulgare possible membrane protein LEM1 (Lem1) gene, complete
            cds
          Length = 2772

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 455  gctgccgtcgtcgccgtcgcggcggtgc 482
            ||||||||||||| ||||||| ||||||
Sbjct: 1324 gctgccgtcgtcgtcgtcgcgccggtgc 1297
to top
>dbj|AK020792.1| Mus musculus 10 days neonate cortex cDNA, RIKEN full-length
           enriched library, clone:A830025H08 product:G
           protein-coupled receptor kinase 2, groucho gene related
           (Drosophila), full insert sequence
          Length = 1226

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 455 gctgccgtcgtcgccgtcgc 474
           ||||||||||||||||||||
Sbjct: 339 gctgccgtcgtcgccgtcgc 320
to top
>dbj|AK078475.1| Mus musculus 12 days embryo female mullerian duct includes
           surrounding region cDNA, RIKEN full-length enriched
           library, clone:6820406D08 product:G protein-coupled
           receptor kinase 2, groucho gene related (Drosophila),
           full insert sequence
          Length = 3106

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 455 gctgccgtcgtcgccgtcgc 474
           ||||||||||||||||||||
Sbjct: 210 gctgccgtcgtcgccgtcgc 191
to top
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 308      gacgtcgccgtcgctgcagt 327
                ||||||||||||||||||||
Sbjct: 24675444 gacgtcgccgtcgctgcagt 24675425



 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 310     cgtcgccgtcgctgcagtcgtcgt 333
               ||||||||||||| ||||||||||
Sbjct: 6403069 cgtcgccgtcgctccagtcgtcgt 6403092
to top
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 172     ggaggtcccgccctttgagcgtcctccc 199
               ||||||| ||||| ||||||||||||||
Sbjct: 2523166 ggaggtcgcgccccttgagcgtcctccc 2523139
to top
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 460      cgtcgtcgccgtcgcggcgg 479
                ||||||||||||||||||||
Sbjct: 21350748 cgtcgtcgccgtcgcggcgg 21350729



 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 460      cgtcgtcgccgtcgcggcgg 479
                ||||||||||||||||||||
Sbjct: 18867152 cgtcgtcgccgtcgcggcgg 18867171
to top
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 441     tctccgtcgacgttgctgcc 460
               ||||||||||||||||||||
Sbjct: 2800844 tctccgtcgacgttgctgcc 2800825
to top
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                            
Query: 310      cgtcgccgtcgctgcagtcgtcgttgcc 337
                ||||||||||||| | ||||||||||||
Sbjct: 13144754 cgtcgccgtcgctccggtcgtcgttgcc 13144781



 Score = 40.1 bits (20), Expect = 7.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                            
Query: 310      cgtcgccgtcgctgcagtcgtcgttgcc 337
                ||||||||||||| | ||||||||||||
Sbjct: 12034390 cgtcgccgtcgctccggtcgtcgttgcc 12034363



 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 460     cgtcgtcgccgtcgcggcgg 479
               ||||||||||||||||||||
Sbjct: 3500210 cgtcgtcgccgtcgcggcgg 3500191
to top
>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome
          Length = 3304561

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 466     cgccgtcgcggcggtgctcg 485
               ||||||||||||||||||||
Sbjct: 3171002 cgccgtcgcggcggtgctcg 3170983
to top
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 259     cggccaggacgtggggcggc 278
               ||||||||||||||||||||
Sbjct: 8457475 cggccaggacgtggggcggc 8457494
to top
>gb|AC135600.3| Oryza sativa chromosome 3 BAC OSJNBb0047K21 genomic sequence, complete
             sequence
          Length = 117046

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 310   cgtcgccgtcgctgcagtcgtcgt 333
             ||||||||||||| ||||||||||
Sbjct: 25548 cgtcgccgtcgctccagtcgtcgt 25525
to top
>gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome
          Length = 3052398

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 460     cgtcgtcgccgtcgcggcgg 479
               ||||||||||||||||||||
Sbjct: 2329441 cgtcgtcgccgtcgcggcgg 2329422
to top
>dbj|AP005862.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OSJNBa0038K02
          Length = 118635

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 460   cgtcgtcgccgtcgcggcgg 479
             ||||||||||||||||||||
Sbjct: 83127 cgtcgtcgccgtcgcggcgg 83108
to top
>dbj|AP003339.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OJ1276_B06
          Length = 175174

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 460   cgtcgtcgccgtcgcggcgg 479
             ||||||||||||||||||||
Sbjct: 68278 cgtcgtcgccgtcgcggcgg 68259
to top
>dbj|AP004740.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
              clone:OSJNBa0092H22
          Length = 165194

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 455    gctgccgtcgtcgccgtcgc 474
              ||||||||||||||||||||
Sbjct: 120504 gctgccgtcgtcgccgtcgc 120523
to top
>dbj|AP003208.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:B1158F07
          Length = 139491

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 310    cgtcgccgtcgctgcagtcgtcgttgcc 337
              ||||||||||||| | ||||||||||||
Sbjct: 120475 cgtcgccgtcgctccggtcgtcgttgcc 120502
to top
>dbj|AP003793.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0487E11
          Length = 151303

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 310   cgtcgccgtcgctgcagtcgtcgttgcc 337
             ||||||||||||| | ||||||||||||
Sbjct: 17055 cgtcgccgtcgctccggtcgtcgttgcc 17082
to top
>dbj|AP003414.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
            clone:B1153F04
          Length = 158174

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 310  cgtcgccgtcgctgcagtcgtcgttgcc 337
            ||||||||||||| | ||||||||||||
Sbjct: 1330 cgtcgccgtcgctccggtcgtcgttgcc 1303
to top
>dbj|AP004735.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0031P18
          Length = 156535

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 310   cgtcgccgtcgctgcagtcgtcgt 333
             ||||||||||||| ||||||||||
Sbjct: 87505 cgtcgccgtcgctccagtcgtcgt 87528
to top
>dbj|AP003921.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0028G04
          Length = 159761

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 310   cgtcgccgtcgctgcagtcgtcgttgcc 337
             ||||||||||||| | ||||||||||||
Sbjct: 80054 cgtcgccgtcgctccggtcgtcgttgcc 80027
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>dbj|AP004734.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
              clone:OSJNBa0026P23
          Length = 180188

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 310    cgtcgccgtcgctgcagtcgtcgt 333
              ||||||||||||| ||||||||||
Sbjct: 167059 cgtcgccgtcgctccagtcgtcgt 167082
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>dbj|AP005740.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0015A04
          Length = 152058

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 441   tctccgtcgacgttgctgcc 460
             ||||||||||||||||||||
Sbjct: 63993 tctccgtcgacgttgctgcc 63974
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>dbj|AK120658.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013158E21, full
           insert sequence
          Length = 1929

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 460 cgtcgtcgccgtcgcggcgg 479
           ||||||||||||||||||||
Sbjct: 118 cgtcgtcgccgtcgcggcgg 99
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>dbj|AK072969.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023144D16, full
           insert sequence
          Length = 964

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 172 ggaggtcccgccctttgagcgtcctccc 199
           ||||||| ||||| ||||||||||||||
Sbjct: 579 ggaggtcgcgccccttgagcgtcctccc 552
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>gb|AC151669.5| Mus musculus chromosome 5, clone RP23-44L13, complete sequence
          Length = 254022

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 455    gctgccgtcgtcgccgtcgc 474
              ||||||||||||||||||||
Sbjct: 151966 gctgccgtcgtcgccgtcgc 151985
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>dbj|AP002912.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0028E10
          Length = 140791

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 460   cgtcgtcgccgtcgcggcgg 479
             ||||||||||||||||||||
Sbjct: 86970 cgtcgtcgccgtcgcggcgg 86951
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 172     ggaggtcccgccctttgagcgtcctccc 199
               ||||||| ||||| ||||||||||||||
Sbjct: 2532197 ggaggtcgcgccccttgagcgtcctccc 2532170
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 308      gacgtcgccgtcgctgcagt 327
                ||||||||||||||||||||
Sbjct: 24603650 gacgtcgccgtcgctgcagt 24603631



 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 310     cgtcgccgtcgctgcagtcgtcgt 333
               ||||||||||||| ||||||||||
Sbjct: 6402944 cgtcgccgtcgctccagtcgtcgt 6402967
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>emb|AL732649.3|CNS08C9O Oryza sativa chromosome 12, . BAC OSJNBb0067N05 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 109555

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 310   cgtcgccgtcgctgcagtcgtcgt 333
             ||||||||||||| ||||||||||
Sbjct: 64617 cgtcgccgtcgctccagtcgtcgt 64640
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>emb|AL954852.5|CNS08CD6 Oryza sativa chromosome 12, . BAC OJ1573_A06 of library Monsanto from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 143895

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 308    gacgtcgccgtcgctgcagt 327
              ||||||||||||||||||||
Sbjct: 120310 gacgtcgccgtcgctgcagt 120291
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>emb|CR382130.1| Yarrowia lipolytica chromosome D of strain CLIB122 of Yarrowia lipolytica
          Length = 3633272

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 327     tcgtcgttgccactgccgctcccg 350
               |||||| |||||||||||||||||
Sbjct: 2945493 tcgtcgctgccactgccgctcccg 2945470
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>emb|AJ233625.1|OCU233625 Oryctolagus cuniculus endogenous retroviral sequence ERV-L pol
           gene, clone ERV-L Rabbit1
          Length = 303

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 50  ccacaagctttcacacacatccat 73
           |||||||||||||||| |||||||
Sbjct: 271 ccacaagctttcacactcatccat 294
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>gb|L23501.1|HUMKPRWI Homo sapiens Prader-Willi chromosome DNA fragment
          Length = 2965

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 245  cctccgccgtcgctcggccaggac 268
            ||||||||||||||| ||||||||
Sbjct: 2621 cctccgccgtcgctcagccaggac 2598


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,090,893
Number of Sequences: 3902068
Number of extensions: 3090893
Number of successful extensions: 68462
Number of sequences better than 10.0: 88
Number of HSP's better than 10.0 without gapping: 96
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 66080
Number of HSP's gapped (non-prelim): 2382
length of query: 537
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 514
effective length of database: 17,143,297,704
effective search space: 8811655019856
effective search space used: 8811655019856
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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