ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd3c05
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1MIOX_ORYSA (Q5Z8T3) Probable inositol oxygenase (EC 1.13.99.1) (... 258 1e-68
2MIOX5_ARATH (Q9FJU4) Inositol oxygenase 5 (EC 1.13.99.1) (Myo-in... 243 3e-64
3MIOX4_ARATH (Q8H1S0) Inositol oxygenase 4 (EC 1.13.99.1) (Myo-in... 238 1e-62
4MIOX1_ARATH (Q8L799) Inositol oxygenase 1 (EC 1.13.99.1) (Myo-in... 234 2e-61
5MIOX2_ARATH (O82200) Inositol oxygenase 2 (EC 1.13.99.1) (Myo-in... 233 5e-61
6MIOX_BRARE (Q4V8T0) Inositol oxygenase (EC 1.13.99.1) (Myo-inosi... 164 2e-40
7MIOX_PIG (Q8WN98) Inositol oxygenase (EC 1.13.99.1) (Myo-inosito... 145 1e-34
8MIOX_MOUSE (Q9QXN5) Inositol oxygenase (EC 1.13.99.1) (Myo-inosi... 144 2e-34
9MIOX_PONPY (Q5REY9) Inositol oxygenase (EC 1.13.99.1) (Myo-inosi... 140 2e-33
10MIOX_RAT (Q9QXN4) Inositol oxygenase (EC 1.13.99.1) (Myo-inosito... 140 3e-33
11MIOX_HUMAN (Q9UGB7) Inositol oxygenase (EC 1.13.99.1) (Myo-inosi... 140 4e-33
12SPB1_CRYNE (Q5KM86) AdoMet-dependent rRNA methyltransferase SPB1... 32 1.2
13CSK_CHICK (P41239) Tyrosine-protein kinase CSK (EC 2.7.10.2) (C-... 32 1.2
14TOP1_RICPR (Q9ZDK2) DNA topoisomerase 1 (EC 5.99.1.2) (DNA topoi... 30 4.6
15RIN2_HUMAN (Q8WYP3) Ras and Rab interactor 2 (Ras interaction/in... 30 6.0
16GRPE_THEMA (Q9WZV4) Protein grpE (HSP-70 cofactor) 30 6.0

>MIOX_ORYSA (Q5Z8T3) Probable inositol oxygenase (EC 1.13.99.1) (Myo-inositol|
           oxygenase)
          Length = 308

 Score =  258 bits (658), Expect = 1e-68
 Identities = 117/129 (90%), Positives = 121/129 (93%)
 Frame = -2

Query: 615 HFKYLKENPDYHNPEFNTKFGVYSEGCGLDNVLMSWGHDDYMYLVAKENKTTLPSAGLFI 436
           HFKY KENPDY NP+ NTKFG YSEGCGLDNVLMSWGHDDYMYLVAKENKTTLPSAGLFI
Sbjct: 180 HFKYFKENPDYLNPKLNTKFGAYSEGCGLDNVLMSWGHDDYMYLVAKENKTTLPSAGLFI 239

Query: 435 IRYHSFYPLHKHGAYTHLMNEEDKENLKWLHVFNKYDLYSKSSVRIDVEKVKPYYMSLIE 256
           IRYHSFYPLHKHGAY HLMN+EDKENLKWL VFNKYDLYSKS+ RIDVEKVKPYYMSLIE
Sbjct: 240 IRYHSFYPLHKHGAYMHLMNDEDKENLKWLRVFNKYDLYSKSNERIDVEKVKPYYMSLIE 299

Query: 255 KYFPEKLKW 229
           KYFP KL+W
Sbjct: 300 KYFPAKLRW 308



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>MIOX5_ARATH (Q9FJU4) Inositol oxygenase 5 (EC 1.13.99.1) (Myo-inositol|
           oxygenase 5) (AtMIOX5)
          Length = 314

 Score =  243 bits (621), Expect = 3e-64
 Identities = 108/129 (83%), Positives = 119/129 (92%)
 Frame = -2

Query: 615 HFKYLKENPDYHNPEFNTKFGVYSEGCGLDNVLMSWGHDDYMYLVAKENKTTLPSAGLFI 436
           H KY  ENPD++NP++NTK G+YSEGCGL+NVLMSWGHDDYMYLVAKEN +TLPS GLFI
Sbjct: 186 HHKYFMENPDFNNPKYNTKAGIYSEGCGLENVLMSWGHDDYMYLVAKENGSTLPSPGLFI 245

Query: 435 IRYHSFYPLHKHGAYTHLMNEEDKENLKWLHVFNKYDLYSKSSVRIDVEKVKPYYMSLIE 256
           IRYHSFYPLHK GAYTHLMNEEDKENLKWLHVFNKYDLYSKS V ++VEKVKPYYMSLI+
Sbjct: 246 IRYHSFYPLHKAGAYTHLMNEEDKENLKWLHVFNKYDLYSKSKVHVNVEKVKPYYMSLIK 305

Query: 255 KYFPEKLKW 229
           KYFPE L+W
Sbjct: 306 KYFPENLRW 314



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>MIOX4_ARATH (Q8H1S0) Inositol oxygenase 4 (EC 1.13.99.1) (Myo-inositol|
           oxygenase 4) (AtMIOX4)
          Length = 317

 Score =  238 bits (606), Expect = 1e-62
 Identities = 106/129 (82%), Positives = 115/129 (89%)
 Frame = -2

Query: 615 HFKYLKENPDYHNPEFNTKFGVYSEGCGLDNVLMSWGHDDYMYLVAKENKTTLPSAGLFI 436
           H KY  ENPD+HN  +NTK G+YSEGCGL+NV+MSWGHDDYMYLVAKEN +TLPSAG FI
Sbjct: 189 HHKYFVENPDFHNETYNTKNGIYSEGCGLNNVMMSWGHDDYMYLVAKENGSTLPSAGQFI 248

Query: 435 IRYHSFYPLHKHGAYTHLMNEEDKENLKWLHVFNKYDLYSKSSVRIDVEKVKPYYMSLIE 256
           IRYHSFYPLH  G YTHLMNEEDKENLKWLHVFNKYDLYSKS V +DVEKVKPYYMSLI+
Sbjct: 249 IRYHSFYPLHTAGEYTHLMNEEDKENLKWLHVFNKYDLYSKSKVHVDVEKVKPYYMSLIK 308

Query: 255 KYFPEKLKW 229
           KYFPE L+W
Sbjct: 309 KYFPENLRW 317



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>MIOX1_ARATH (Q8L799) Inositol oxygenase 1 (EC 1.13.99.1) (Myo-inositol|
           oxygenase 1) (AtMIOX1)
          Length = 311

 Score =  234 bits (597), Expect = 2e-61
 Identities = 103/129 (79%), Positives = 115/129 (89%)
 Frame = -2

Query: 615 HFKYLKENPDYHNPEFNTKFGVYSEGCGLDNVLMSWGHDDYMYLVAKENKTTLPSAGLFI 436
           H KY KENPDY NP +N+K+G+Y+EGCGLDNVLMSWGHDDYMYLVAKEN+TTLPSAGLFI
Sbjct: 183 HHKYFKENPDYDNPSYNSKYGIYTEGCGLDNVLMSWGHDDYMYLVAKENQTTLPSAGLFI 242

Query: 435 IRYHSFYPLHKHGAYTHLMNEEDKENLKWLHVFNKYDLYSKSSVRIDVEKVKPYYMSLIE 256
           IRYHSFY LHK  AY HLMN ED+EN+KWL VFNKYDLYSKS VR++VE+VKPYY+SL  
Sbjct: 243 IRYHSFYALHKSEAYKHLMNNEDRENMKWLKVFNKYDLYSKSKVRVNVEEVKPYYLSLTN 302

Query: 255 KYFPEKLKW 229
           KYFP KLKW
Sbjct: 303 KYFPSKLKW 311



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>MIOX2_ARATH (O82200) Inositol oxygenase 2 (EC 1.13.99.1) (Myo-inositol|
           oxygenase 2) (AtMIOX2)
          Length = 317

 Score =  233 bits (593), Expect = 5e-61
 Identities = 105/133 (78%), Positives = 118/133 (88%)
 Frame = -2

Query: 627 NATSHFKYLKENPDYHNPEFNTKFGVYSEGCGLDNVLMSWGHDDYMYLVAKENKTTLPSA 448
           +A  H KY K N D +NP++NTK GVY+EGCGLDNVLMSWGHDDYMYLVAK+N TTLP A
Sbjct: 185 SANIHHKYFKGNHDINNPKYNTKNGVYTEGCGLDNVLMSWGHDDYMYLVAKKNGTTLPHA 244

Query: 447 GLFIIRYHSFYPLHKHGAYTHLMNEEDKENLKWLHVFNKYDLYSKSSVRIDVEKVKPYYM 268
           GLFIIRYHSFYPLHK GAYTHLMN+ED+++LKWLHVFNKYDLYSKS V +DVE+VKPYY+
Sbjct: 245 GLFIIRYHSFYPLHKAGAYTHLMNDEDRDDLKWLHVFNKYDLYSKSKVLVDVEQVKPYYI 304

Query: 267 SLIEKYFPEKLKW 229
           SLI KYFP KLKW
Sbjct: 305 SLINKYFPAKLKW 317



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>MIOX_BRARE (Q4V8T0) Inositol oxygenase (EC 1.13.99.1) (Myo-inositol oxygenase)|
          Length = 278

 Score =  164 bits (416), Expect = 2e-40
 Identities = 72/122 (59%), Positives = 92/122 (75%)
 Frame = -2

Query: 594 NPDYHNPEFNTKFGVYSEGCGLDNVLMSWGHDDYMYLVAKENKTTLPSAGLFIIRYHSFY 415
           NPD  NP  NT+FG+Y   CGLD VLMSWGHD+Y+Y V K NK T+P  GL++IR+HSFY
Sbjct: 157 NPDGKNPAPNTEFGIYEPQCGLDKVLMSWGHDEYLYRVMKFNKCTIPEEGLYMIRFHSFY 216

Query: 414 PLHKHGAYTHLMNEEDKENLKWLHVFNKYDLYSKSSVRIDVEKVKPYYMSLIEKYFPEKL 235
           P H +G Y HL NE+D++ L W+  FNK+DLY+KS+   DVE++KPYY SLI+KY P  L
Sbjct: 217 PWHSNGDYMHLCNEKDQQMLPWVKEFNKFDLYTKSTELPDVERLKPYYQSLIDKYCPGVL 276

Query: 234 KW 229
           +W
Sbjct: 277 QW 278



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>MIOX_PIG (Q8WN98) Inositol oxygenase (EC 1.13.99.1) (Myo-inositol oxygenase)|
           (Aldehyde reductase-like 6)
          Length = 282

 Score =  145 bits (366), Expect = 1e-34
 Identities = 63/124 (50%), Positives = 85/124 (68%)
 Frame = -2

Query: 600 KENPDYHNPEFNTKFGVYSEGCGLDNVLMSWGHDDYMYLVAKENKTTLPSAGLFIIRYHS 421
           ++NPD  +P ++T+ G+Y   CGL+N LMSWGHD+YMY + K NK +LP    +IIR+HS
Sbjct: 159 QDNPDLQDPVYSTELGMYQPHCGLENALMSWGHDEYMYQMMKFNKFSLPGEAFYIIRFHS 218

Query: 420 FYPLHKHGAYTHLMNEEDKENLKWLHVFNKYDLYSKSSVRIDVEKVKPYYMSLIEKYFPE 241
           FYP H  G Y  L NE+D   L W+  FNK+DLY+K S   DV++++PYY  LI+KY P 
Sbjct: 219 FYPWHTGGDYRQLCNEQDLAMLPWVQEFNKFDLYTKGSDMPDVDELRPYYQGLIDKYCPG 278

Query: 240 KLKW 229
            L W
Sbjct: 279 VLCW 282



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>MIOX_MOUSE (Q9QXN5) Inositol oxygenase (EC 1.13.99.1) (Myo-inositol oxygenase)|
           (Aldehyde reductase-like 6) (Renal-specific
           oxidoreductase)
          Length = 285

 Score =  144 bits (364), Expect = 2e-34
 Identities = 61/124 (49%), Positives = 86/124 (69%)
 Frame = -2

Query: 600 KENPDYHNPEFNTKFGVYSEGCGLDNVLMSWGHDDYMYLVAKENKTTLPSAGLFIIRYHS 421
           ++NPD  +P ++T+ G+Y   CGL+NVLMSWGHD+Y+Y + K NK +LPS   ++IR+HS
Sbjct: 162 QDNPDLQDPRYSTELGMYQPHCGLENVLMSWGHDEYLYQMMKFNKFSLPSEAFYMIRFHS 221

Query: 420 FYPLHKHGAYTHLMNEEDKENLKWLHVFNKYDLYSKSSVRIDVEKVKPYYMSLIEKYFPE 241
           FYP H  G Y  L +++D + L W+  FNK+DLY+K     DVE ++PYY  LI+KY P 
Sbjct: 222 FYPWHTGGDYRQLCSQQDLDMLPWVQEFNKFDLYTKCPDLPDVESLRPYYQGLIDKYCPG 281

Query: 240 KLKW 229
            L W
Sbjct: 282 TLSW 285



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>MIOX_PONPY (Q5REY9) Inositol oxygenase (EC 1.13.99.1) (Myo-inositol oxygenase)|
          Length = 285

 Score =  140 bits (354), Expect = 2e-33
 Identities = 61/124 (49%), Positives = 83/124 (66%)
 Frame = -2

Query: 600 KENPDYHNPEFNTKFGVYSEGCGLDNVLMSWGHDDYMYLVAKENKTTLPSAGLFIIRYHS 421
           ++NPD  +P ++T+ G+Y   CGLD VLMSWGHD+YMY V K NK +LP    ++IR+HS
Sbjct: 162 QDNPDLQDPRYSTELGMYQPHCGLDRVLMSWGHDEYMYQVMKFNKFSLPPEAFYMIRFHS 221

Query: 420 FYPLHKHGAYTHLMNEEDKENLKWLHVFNKYDLYSKSSVRIDVEKVKPYYMSLIEKYFPE 241
           FYP H    Y  L +++D   L W+  FNK+DLY+K     DV+K++PYY  LI+KY P 
Sbjct: 222 FYPWHTGSDYQQLCSQQDLAMLPWVQEFNKFDLYTKCPDLPDVDKLRPYYQGLIDKYCPG 281

Query: 240 KLKW 229
            L W
Sbjct: 282 ILSW 285



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>MIOX_RAT (Q9QXN4) Inositol oxygenase (EC 1.13.99.1) (Myo-inositol oxygenase)|
           (Aldehyde reductase-like 6) (Renal-specific
           oxidoreductase) (Kidney-specific protein 32)
          Length = 285

 Score =  140 bits (353), Expect = 3e-33
 Identities = 58/124 (46%), Positives = 86/124 (69%)
 Frame = -2

Query: 600 KENPDYHNPEFNTKFGVYSEGCGLDNVLMSWGHDDYMYLVAKENKTTLPSAGLFIIRYHS 421
           ++NPD  +P ++T+ G+Y   CGL+NVLMSWGHD+Y+Y + K NK +LPS   +++R+HS
Sbjct: 162 QDNPDLQDPRYSTELGMYQPHCGLENVLMSWGHDEYLYQMMKFNKFSLPSEAFYMVRFHS 221

Query: 420 FYPLHKHGAYTHLMNEEDKENLKWLHVFNKYDLYSKSSVRIDVEKVKPYYMSLIEKYFPE 241
           FYP H  G Y  L +++D + L W+  FNK+DLY+K     +V+ ++PYY  LI+KY P 
Sbjct: 222 FYPWHTGGDYRQLCSQQDLDMLPWVQEFNKFDLYTKCPDLPEVKSLRPYYQGLIDKYCPG 281

Query: 240 KLKW 229
            L W
Sbjct: 282 ILSW 285



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>MIOX_HUMAN (Q9UGB7) Inositol oxygenase (EC 1.13.99.1) (Myo-inositol oxygenase)|
           (Aldehyde reductase-like 6) (Renal-specific
           oxidoreductase) (Kidney-specific protein 32)
          Length = 285

 Score =  140 bits (352), Expect = 4e-33
 Identities = 61/124 (49%), Positives = 83/124 (66%)
 Frame = -2

Query: 600 KENPDYHNPEFNTKFGVYSEGCGLDNVLMSWGHDDYMYLVAKENKTTLPSAGLFIIRYHS 421
           ++NPD  +P ++T+ G+Y   CGLD VLMSWGHD+YMY V K NK +LP    ++IR+HS
Sbjct: 162 QDNPDLQDPRYSTELGMYQPHCGLDRVLMSWGHDEYMYQVMKFNKFSLPPEAFYMIRFHS 221

Query: 420 FYPLHKHGAYTHLMNEEDKENLKWLHVFNKYDLYSKSSVRIDVEKVKPYYMSLIEKYFPE 241
           FYP H    Y  L +++D   L W+  FNK+DLY+K     DV+K++PYY  LI+KY P 
Sbjct: 222 FYPWHTGRDYQQLCSQQDLAMLPWVREFNKFDLYTKCPDLPDVDKLRPYYQGLIDKYCPG 281

Query: 240 KLKW 229
            L W
Sbjct: 282 ILSW 285



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>SPB1_CRYNE (Q5KM86) AdoMet-dependent rRNA methyltransferase SPB1 (EC 2.1.1.-)|
           (2'-O-ribose RNA methyltransferase)
           (S-adenosyl-L-methionine-dependent methyltransferase)
          Length = 908

 Score = 32.3 bits (72), Expect = 1.2
 Identities = 20/64 (31%), Positives = 29/64 (45%)
 Frame = -2

Query: 432 RYHSFYPLHKHGAYTHLMNEEDKENLKWLHVFNKYDLYSKSSVRIDVEKVKPYYMSLIEK 253
           R   FY L K   Y        +   K +H+  KYDL SK+   ID+      ++ + EK
Sbjct: 12  RLDKFYRLAKEQGY------RARSAFKLVHLNRKYDLLSKARCCIDLCAAPGGWLQVAEK 65

Query: 252 YFPE 241
           Y P+
Sbjct: 66  YMPK 69



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>CSK_CHICK (P41239) Tyrosine-protein kinase CSK (EC 2.7.10.2) (C-SRC kinase)|
          Length = 450

 Score = 32.3 bits (72), Expect = 1.2
 Identities = 30/98 (30%), Positives = 42/98 (42%), Gaps = 3/98 (3%)
 Frame = -2

Query: 534 GLDNVLMSWGHDDYMYLVAKENKTTL---PSAGLFIIRYHSFYPLHKHGAYTHLMNEEDK 364
           G+   LM W H      + +E    L   P  GLF++R  + YP    G YT  ++ E K
Sbjct: 74  GIKLSLMPWFHGK----ITREQAERLLYPPETGLFLVRESTNYP----GDYTLCVSCEGK 125

Query: 363 ENLKWLHVFNKYDLYSKSSVRIDVEKVKPYYMSLIEKY 250
                  V +   +YS S + ID E      M L+E Y
Sbjct: 126 -------VEHYRIIYSSSKLSIDEEVYFENLMQLVEHY 156



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>TOP1_RICPR (Q9ZDK2) DNA topoisomerase 1 (EC 5.99.1.2) (DNA topoisomerase I)|
           (Omega-protein) (Relaxing enzyme) (Untwisting enzyme)
           (Swivelase)
          Length = 776

 Score = 30.4 bits (67), Expect = 4.6
 Identities = 21/64 (32%), Positives = 33/64 (51%)
 Frame = -2

Query: 537 CGLDNVLMSWGHDDYMYLVAKENKTTLPSAGLFIIRYHSFYPLHKHGAYTHLMNEEDKEN 358
           C ++NV+M    D  +  +A ENK  L  A   II +  FY +     Y   +++ED+E+
Sbjct: 388 CQMENVIM----DLVIANLASENKEYLAKANGSIIAFDGFYKV-----YRESLDDEDEED 438

Query: 357 LKWL 346
            K L
Sbjct: 439 NKML 442



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>RIN2_HUMAN (Q8WYP3) Ras and Rab interactor 2 (Ras interaction/interference|
           protein 2) (Ras inhibitor JC265) (Ras association domain
           family 4)
          Length = 895

 Score = 30.0 bits (66), Expect = 6.0
 Identities = 16/45 (35%), Positives = 28/45 (62%), Gaps = 2/45 (4%)
 Frame = -2

Query: 366 KENLKWLHVFNKYDL--YSKSSVRIDVEKVKPYYMSLIEKYFPEK 238
           KENL+ +   N  +L  ++ +   +DVEK+K  +M++ + Y PEK
Sbjct: 625 KENLQLVRQRNPQELGVFAPTPDFVDVEKIKVKFMTMQKMYSPEK 669



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>GRPE_THEMA (Q9WZV4) Protein grpE (HSP-70 cofactor)|
          Length = 172

 Score = 30.0 bits (66), Expect = 6.0
 Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
 Frame = -2

Query: 393 YTHLMNEEDKENLKWLHVFNKYDLYSKSSV-RIDVEKVKPY 274
           Y  L+N  +KE L  +HV  K+D +   +V R++ E V+ Y
Sbjct: 88  YKKLLNVLEKEGLTKIHVGEKFDPFEHEAVERVETEDVEEY 128


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 85,554,163
Number of Sequences: 219361
Number of extensions: 1753816
Number of successful extensions: 4702
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 4565
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4702
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5881538857
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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