Clone Name | rbasd3c03 |
---|---|
Clone Library Name | barley_pub |
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 67.9 bits (34), Expect = 3e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 260 ctttcaggcccagttcttccgcttggacctcagcttcattagtttgtccttccatgttgc 319 ||||||||||||||| |||||||| ||||||||| ||| ||||||||| |||| ||||| Sbjct: 16333468 ctttcaggcccagtttttccgcttagacctcagcagcatcagtttgtccctccacgttgc 16333527 Query: 320 tg 321 || Sbjct: 16333528 tg 16333529
>dbj|AP005520.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0426E02 Length = 166985 Score = 67.9 bits (34), Expect = 3e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 260 ctttcaggcccagttcttccgcttggacctcagcttcattagtttgtccttccatgttgc 319 ||||||||||||||| |||||||| ||||||||| ||| ||||||||| |||| ||||| Sbjct: 39320 ctttcaggcccagtttttccgcttagacctcagcagcatcagtttgtccctccacgttgc 39379 Query: 320 tg 321 || Sbjct: 39380 tg 39381
>ref|XM_481915.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1119 Score = 63.9 bits (32), Expect = 5e-07 Identities = 53/60 (88%) Strand = Plus / Minus Query: 260 ctttcaggcccagttcttccgcttggacctcagcttcattagtttgtccttccatgttgc 319 ||||||||||||||| |||||||| ||||||||| ||| ||||||||| |||| ||||| Sbjct: 948 ctttcaggcccagtttttccgcttagacctcagcagcatcagtttgtccctccacgttgc 889
>ref|XM_481914.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1460 Score = 63.9 bits (32), Expect = 5e-07 Identities = 53/60 (88%) Strand = Plus / Minus Query: 260 ctttcaggcccagttcttccgcttggacctcagcttcattagtttgtccttccatgttgc 319 ||||||||||||||| |||||||| ||||||||| ||| ||||||||| |||| ||||| Sbjct: 1243 ctttcaggcccagtttttccgcttagacctcagcagcatcagtttgtccctccacgttgc 1184
>ref|XM_507201.1| PREDICTED Oryza sativa (japonica cultivar-group), P0426E02.15-2 mRNA Length = 1525 Score = 63.9 bits (32), Expect = 5e-07 Identities = 53/60 (88%) Strand = Plus / Minus Query: 260 ctttcaggcccagttcttccgcttggacctcagcttcattagtttgtccttccatgttgc 319 ||||||||||||||| |||||||| ||||||||| ||| ||||||||| |||| ||||| Sbjct: 1223 ctttcaggcccagtttttccgcttagacctcagcagcatcagtttgtccctccacgttgc 1164
>dbj|AK112035.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-040-G04, full insert sequence Length = 1119 Score = 63.9 bits (32), Expect = 5e-07 Identities = 53/60 (88%) Strand = Plus / Minus Query: 260 ctttcaggcccagttcttccgcttggacctcagcttcattagtttgtccttccatgttgc 319 ||||||||||||||| |||||||| ||||||||| ||| ||||||||| |||| ||||| Sbjct: 948 ctttcaggcccagtttttccgcttagacctcagcagcatcagtttgtccctccacgttgc 889
>dbj|AK105899.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-204-F07, full insert sequence Length = 1460 Score = 63.9 bits (32), Expect = 5e-07 Identities = 53/60 (88%) Strand = Plus / Minus Query: 260 ctttcaggcccagttcttccgcttggacctcagcttcattagtttgtccttccatgttgc 319 ||||||||||||||| |||||||| ||||||||| ||| ||||||||| |||| ||||| Sbjct: 1243 ctttcaggcccagtttttccgcttagacctcagcagcatcagtttgtccctccacgttgc 1184
>dbj|AK070322.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023052C20, full insert sequence Length = 1525 Score = 63.9 bits (32), Expect = 5e-07 Identities = 53/60 (88%) Strand = Plus / Minus Query: 260 ctttcaggcccagttcttccgcttggacctcagcttcattagtttgtccttccatgttgc 319 ||||||||||||||| |||||||| ||||||||| ||| ||||||||| |||| ||||| Sbjct: 1223 ctttcaggcccagtttttccgcttagacctcagcagcatcagtttgtccctccacgttgc 1164
>gb|AC008571.6| Homo sapiens chromosome 5 clone CTC-550M4, complete sequence Length = 214267 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Plus Query: 324 gaacagagaaataaataataatttaatag 352 ||||||||||||||||||||| ||||||| Sbjct: 3978 gaacagagaaataaataataagttaatag 4006
>gb|AY106382.1| Zea mays PCO146928 mRNA sequence Length = 1474 Score = 50.1 bits (25), Expect = 0.007 Identities = 46/53 (86%) Strand = Plus / Minus Query: 263 tcaggcccagttcttccgcttggacctcagcttcattagtttgtccttccatg 315 |||||||||||||| |||||| ||||| ||| || |||||||||||||||| Sbjct: 1207 tcaggcccagttctcccgcttagacctgagccgaatcagtttgtccttccatg 1155
>dbj|AB216787.1| Equus caballus DNA, microsatellite TKY2844 Length = 506 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 453 aataaggtgacatttctgttttctt 477 ||||||||||||||||||||||||| Sbjct: 43 aataaggtgacatttctgttttctt 67
>emb|CR854838.13| Zebrafish DNA sequence from clone CH211-130H14 in linkage group 13, complete sequence Length = 154065 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 329 gagaaataaataataatttaat 350 |||||||||||||||||||||| Sbjct: 123139 gagaaataaataataatttaat 123118
>gb|AC144479.1| Pan troglodytes BAC clone RP43-126P12 from 7, complete sequence Length = 211515 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 330 agaaataaataataatttaata 351 |||||||||||||||||||||| Sbjct: 145445 agaaataaataataatttaata 145424
>emb|BX005151.5| Zebrafish DNA sequence from clone CH211-11M20, complete sequence Length = 142257 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 329 gagaaataaataataatttaat 350 |||||||||||||||||||||| Sbjct: 33103 gagaaataaataataatttaat 33124
>emb|AL929165.9| Mouse DNA sequence from clone RP23-446D4 on chromosome 2, complete sequence Length = 181326 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 112 tgaatattagtctgaatttaca 133 |||||||||||||||||||||| Sbjct: 171889 tgaatattagtctgaatttaca 171910
>gb|AC000123.1|HSAC000123 Human Cosmid g0771a106, complete sequence Length = 42879 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 330 agaaataaataataatttaata 351 |||||||||||||||||||||| Sbjct: 22223 agaaataaataataatttaata 22244
>emb|AL731703.16| Mouse DNA sequence from clone RP23-100O16 on chromosome 2, complete sequence Length = 187541 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 332 aaataaataataatttaatagt 353 |||||||||||||||||||||| Sbjct: 75678 aaataaataataatttaatagt 75657
>gb|AY522985.1| Colinus virginianus clone A-6F microsatellite sequence Length = 602 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 332 aaataaataataatttaatagttct 356 |||||||||||| |||||||||||| Sbjct: 301 aaataaataatattttaatagttct 325
>gb|AC115766.9| Mus musculus chromosome 1, clone RP23-82I24, complete sequence Length = 225600 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 334 ataaataataatttaatagtt 354 ||||||||||||||||||||| Sbjct: 95391 ataaataataatttaatagtt 95371
>gb|AC139673.9| Mus musculus chromosome 1, clone RP23-280I2, complete sequence Length = 263505 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 334 ataaataataatttaatagtt 354 ||||||||||||||||||||| Sbjct: 22101 ataaataataatttaatagtt 22121
>gb|AC135048.2| Homo sapiens chromosome 16 clone RP11-1072A3, complete sequence Length = 177719 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 471 ttttctttgttcatttgtacg 491 ||||||||||||||||||||| Sbjct: 34604 ttttctttgttcatttgtacg 34584
>gb|AC007384.3| Homo sapiens BAC clone RP11-325F22 from 7, complete sequence Length = 170842 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 332 aaataaataataatttaatag 352 ||||||||||||||||||||| Sbjct: 60806 aaataaataataatttaatag 60826
>emb|AL034431.16|HS970A17 Human DNA sequence from clone RP5-970A17 on chromosome 20 Contains STSs, GSSs and genomic marker D20S850, complete sequence Length = 82906 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 453 aataaggtgacatttctgttttctt 477 ||||||||| ||||||||||||||| Sbjct: 40506 aataaggtggcatttctgttttctt 40530
>emb|AL845362.4| Zebrafish DNA sequence from clone CH211-142H2 in linkage group 2 Contains a putative novel gene, a novel gene similar to PTF1 (pancreas transcription factor 1, subunit p48), a novel gene similar to DLGAP1 (discs, large (Drosophila) homolog-associated protein 1) and two CpG islands, complete sequence Length = 161465 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 331 gaaataaataataatttaata 351 ||||||||||||||||||||| Sbjct: 36902 gaaataaataataatttaata 36922
>emb|CR859381.1| Pongo pygmaeus mRNA; cDNA DKFZp459P2428 (from clone DKFZp459P2428) Length = 2829 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 332 aaataaataataatttaatag 352 ||||||||||||||||||||| Sbjct: 1553 aaataaataataatttaatag 1573
>dbj|AK124251.1| Homo sapiens cDNA FLJ42257 fis, clone TKIDN2010812 Length = 2943 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 332 aaataaataataatttaatag 352 ||||||||||||||||||||| Sbjct: 1686 aaataaataataatttaatag 1706
>gb|AC109928.4| Homo sapiens BAC clone RP11-755F21 from 4, complete sequence Length = 112353 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 326 acagagaaataaataataatt 346 ||||||||||||||||||||| Sbjct: 111294 acagagaaataaataataatt 111274
>emb|CR523448.1| Gallus gallus finished cDNA, clone ChEST991c21 Length = 1396 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 311 ccatgttgctgcagaacagagaaat 335 |||| |||||||||||||||||||| Sbjct: 587 ccattttgctgcagaacagagaaat 563
>gb|AC135050.3| Homo sapiens chromosome 16 clone RP11-196G11, complete sequence Length = 182230 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 471 ttttctttgttcatttgtacg 491 ||||||||||||||||||||| Sbjct: 28005 ttttctttgttcatttgtacg 28025
>gb|AC007787.1| Homo sapiens chromosome 19 cosmid R34714, complete sequence Length = 37045 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 318 gctgcagaacagagaaataaa 338 ||||||||||||||||||||| Sbjct: 15227 gctgcagaacagagaaataaa 15207
>gb|AC002430.1|AC002430 Human BAC clone CTB-66D11 from 7q22, complete sequence Length = 140856 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 332 aaataaataataatttaatag 352 ||||||||||||||||||||| Sbjct: 41323 aaataaataataatttaatag 41343
>emb|BX323837.7| Zebrafish DNA sequence from clone DKEY-5N7 in linkage group 18, complete sequence Length = 228251 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 330 agaaataaataataatttaat 350 ||||||||||||||||||||| Sbjct: 109801 agaaataaataataatttaat 109781
>emb|AL163195.5|CNS01RIH Human chromosome 14 DNA sequence BAC R-14J7 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 162209 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 306 tccttccatgttgctgcagaa 326 ||||||||||||||||||||| Sbjct: 90823 tccttccatgttgctgcagaa 90803
>dbj|AP002075.3| Homo sapiens genomic DNA, chromosome 4q22-q24, clone:2230O14, complete sequence Length = 118977 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 326 acagagaaataaataataatt 346 ||||||||||||||||||||| Sbjct: 118043 acagagaaataaataataatt 118063
>gb|AC154391.1| Medicago truncatula chromosome 7 BAC clone mth2-143d17, complete sequence Length = 123865 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 332 aaataaataataatttaata 351 |||||||||||||||||||| Sbjct: 55694 aaataaataataatttaata 55675
>gb|AC163280.2| Mus musculus BAC clone RP23-478G5 from chromosome 14, complete sequence Length = 202761 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 332 aaataaataataatttaata 351 |||||||||||||||||||| Sbjct: 38544 aaataaataataatttaata 38525
>gb|AC154276.2| Mus musculus BAC clone RP24-260F19 from chromosome 14, complete sequence Length = 186529 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 332 aaataaataataatttaata 351 |||||||||||||||||||| Sbjct: 103556 aaataaataataatttaata 103575
>ref|XM_629805.1| Dictyostelium discoideum hypothetical protein (DDB0191618), partial mRNA Length = 717 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 330 agaaataaataataatttaa 349 |||||||||||||||||||| Sbjct: 177 agaaataaataataatttaa 196
>gb|AC123650.7| Mus musculus chromosome 1, clone RP23-124N16, complete sequence Length = 220806 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 241 acagtccaaagaggctggtc 260 |||||||||||||||||||| Sbjct: 210522 acagtccaaagaggctggtc 210503
>gb|AC119893.9| Mus musculus chromosome 1, clone RP24-225A6, complete sequence Length = 179453 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 241 acagtccaaagaggctggtc 260 |||||||||||||||||||| Sbjct: 131851 acagtccaaagaggctggtc 131870
>gb|AC145967.3| Pan troglodytes BAC clone RP43-17M21 from 7, complete sequence Length = 179148 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 332 aaataaataataatttaata 351 |||||||||||||||||||| Sbjct: 63914 aaataaataataatttaata 63895
>gb|AC147100.2| Pan troglodytes BAC clone RP43-45I10 from 7, complete sequence Length = 150235 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 332 aaataaataataatttaata 351 |||||||||||||||||||| Sbjct: 113275 aaataaataataatttaata 113294
>gb|AC147026.2| Mus musculus BAC clone RP23-249A22 from chromosome 19, complete sequence Length = 190038 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 469 tgttttctttgttcatttgt 488 |||||||||||||||||||| Sbjct: 13247 tgttttctttgttcatttgt 13266
>gb|DQ168740.1| Pseudocyphomyia mimetica voucher CB0114 28S ribosomal RNA gene, partial sequence Length = 2482 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 332 aaataaataataatttaata 351 |||||||||||||||||||| Sbjct: 1660 aaataaataataatttaata 1679
>gb|AC146375.3| Pan troglodytes BAC clone RP43-75I2 from 7, complete sequence Length = 205242 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 332 aaataaataataatttaata 351 |||||||||||||||||||| Sbjct: 160889 aaataaataataatttaata 160908
>ref|XM_822473.1| Trypanosoma brucei TREU927 hypothetical protein (Tb09.211.4260) partial mRNA Length = 537 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 332 aaataaataataatttaata 351 |||||||||||||||||||| Sbjct: 165 aaataaataataatttaata 146
>gb|AC078859.13| Homo sapiens 3 BAC RP11-588N12 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 176802 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 141 cttctgagggccttggaata 160 |||||||||||||||||||| Sbjct: 77387 cttctgagggccttggaata 77368
>emb|Z68131.1|CEB0395 Caenorhabditis elegans Cosmid B0395, complete sequence Length = 25671 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 227 atttttgtatttacacagtc 246 |||||||||||||||||||| Sbjct: 11377 atttttgtatttacacagtc 11396
>gb|AC124382.4| Mus musculus BAC clone RP24-409N22 from chromosome 1, complete sequence Length = 168354 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 332 aaataaataataatttaatagttc 355 ||||||||||||||||||| |||| Sbjct: 31939 aaataaataataatttaatcgttc 31916
>gb|AC125118.5| Mus musculus BAC clone RP24-264B17 from chromosome 1, complete sequence Length = 177149 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 332 aaataaataataatttaatagttc 355 ||||||||||||||||||| |||| Sbjct: 11818 aaataaataataatttaatcgttc 11841
>gb|AC112272.4| Mus musculus BAC clone RP24-121N15 from 19, complete sequence Length = 155861 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 469 tgttttctttgttcatttgt 488 |||||||||||||||||||| Sbjct: 34731 tgttttctttgttcatttgt 34750
>ref|XM_950088.1| Theileria annulata strain Ankara hypothetical protein (TA04815) partial mRNA Length = 5295 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 332 aaataaataataatttaata 351 |||||||||||||||||||| Sbjct: 4097 aaataaataataatttaata 4116
>gb|AC146114.3| Pan troglodytes BAC clone RP43-22O2 from 7, complete sequence Length = 176328 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 332 aaataaataataatttaata 351 |||||||||||||||||||| Sbjct: 159561 aaataaataataatttaata 159542
>emb|AL591504.5| Human DNA sequence from clone RP11-445J9 on chromosome 1 Contains a novel gene, complete sequence Length = 150599 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 333 aataaataataatttaatagttct 356 |||||||| ||||||||||||||| Sbjct: 32018 aataaatattaatttaatagttct 31995
>emb|AL450064.4| Human DNA sequence from clone RP11-134K4 on chromosome 13, complete sequence Length = 61008 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 66 acaggcagaaataagattta 85 |||||||||||||||||||| Sbjct: 14297 acaggcagaaataagattta 14278
>emb|AL359204.10| Human DNA sequence from clone RP11-147H13 on chromosome 9 Contains part of the CHAC gene for chorea acanthocytosis, complete sequence Length = 99691 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 332 aaataaataataatttaata 351 |||||||||||||||||||| Sbjct: 61045 aaataaataataatttaata 61026
>emb|AL161442.22| Human DNA sequence from clone RP6-102F8 on chromosome Xq25-26.3 Contains the 5' end of variants of the MBNL3 gene for muscleblind-like 3 (Drosophila) and a CpG island, complete sequence Length = 112453 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 468 ctgttttctttgttcatttgtacg 491 ||||||||||| |||||||||||| Sbjct: 99145 ctgttttctttattcatttgtacg 99168
>gb|AC090146.5| Homo sapiens chromosome 8, clone RP11-366J9, complete sequence Length = 158233 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 332 aaataaataataatttaata 351 |||||||||||||||||||| Sbjct: 9549 aaataaataataatttaata 9530
>emb|AL078590.28|HSA557H15 Human DNA sequence from clone RP11-557H15 on chromosome 6q23.1-23.3 Contains three novel genes, the 3' part of a novel gene and a member A1 of family with sequence similarity 8 (FAM8A1) pseudogene, complete sequence Length = 195021 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 330 agaaataaataataatttaa 349 |||||||||||||||||||| Sbjct: 43711 agaaataaataataatttaa 43692
>gb|AC061999.6| Homo sapiens chromosome 11, clone RP11-545D22, complete sequence Length = 182549 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 377 cacttacagtgtattttaag 396 |||||||||||||||||||| Sbjct: 94600 cacttacagtgtattttaag 94581
>dbj|AK095278.1| Homo sapiens cDNA FLJ37959 fis, clone CTONG2009572, highly similar to TRIFUNCTONAL ENZYME BETA SUBUNIT, MITOCHONDRIAL PRECURSOR Length = 2883 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 395 agaacagtacacaagatcaa 414 |||||||||||||||||||| Sbjct: 47 agaacagtacacaagatcaa 28
>dbj|AP006716.1| Staphylococcus haemolyticus JCSC1435 DNA, complete genome Length = 2685015 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 331 gaaataaataataatttaat 350 |||||||||||||||||||| Sbjct: 859781 gaaataaataataatttaat 859762
>gb|AC106013.2| Homo sapiens chromosome 8, clone RP11-1109L18, complete sequence Length = 166093 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 325 aacagagaaataaataataa 344 |||||||||||||||||||| Sbjct: 140887 aacagagaaataaataataa 140868
>gb|AC097528.2| Homo sapiens BAC clone RP11-662G20 from 4, complete sequence Length = 170412 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 465 tttctgttttctttgttcat 484 |||||||||||||||||||| Sbjct: 164657 tttctgttttctttgttcat 164638
>gb|AC098822.3| Homo sapiens BAC clone RP11-338B23 from 4, complete sequence Length = 181792 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 465 tttctgttttctttgttcatttgt 488 ||||||||||||||||| |||||| Sbjct: 37534 tttctgttttctttgttaatttgt 37557
>emb|BX569785.12| Zebrafish DNA sequence from clone DKEY-159F4 in linkage group 10, complete sequence Length = 140734 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 332 aaataaataataatttaata 351 |||||||||||||||||||| Sbjct: 46594 aaataaataataatttaata 46575
>emb|AL928929.11| Zebrafish DNA sequence from clone CH211-218M9 in linkage group 20, complete sequence Length = 134154 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 332 aaataaataataatttaata 351 |||||||||||||||||||| Sbjct: 13223 aaataaataataatttaata 13204
>emb|AL110675.1|CNS018QK Botrytis cinerea strain T4 cDNA library Length = 840 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 332 aaataaataataatttaata 351 |||||||||||||||||||| Sbjct: 694 aaataaataataatttaata 675
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 332 aaataaataataatttaata 351 |||||||||||||||||||| Sbjct: 10603427 aaataaataataatttaata 10603408
>gb|AC007646.8|AC007646 Drosophila melanogaster, chromosome 3R, region 87F-87F, BAC clone BACR03J04, complete sequence Length = 179454 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 332 aaataaataataatttaata 351 |||||||||||||||||||| Sbjct: 153628 aaataaataataatttaata 153609
>gb|AC007650.7|AC007650 Drosophila melanogaster, chromosome 3R, region 87F-87F, BAC clone BACR30G22, complete sequence Length = 167912 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 332 aaataaataataatttaata 351 |||||||||||||||||||| Sbjct: 60559 aaataaataataatttaata 60540
>gb|AC016763.8| Homo sapiens BAC clone RP11-548K3 from 2, complete sequence Length = 143283 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 467 tctgttttctttgttcattt 486 |||||||||||||||||||| Sbjct: 52110 tctgttttctttgttcattt 52091
>gb|AC158687.2| Mus musculus 10 BAC RP24-423N13 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 154559 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 431 tactccatacatcttcatgt 450 |||||||||||||||||||| Sbjct: 109048 tactccatacatcttcatgt 109029
>gb|AC010896.15| Homo sapiens BAC clone RP11-499P9 from 2, complete sequence Length = 188780 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 395 agaacagtacacaagatcaa 414 |||||||||||||||||||| Sbjct: 30923 agaacagtacacaagatcaa 30904
>gb|AC084239.1|AC084239 Homo sapiens chromosome 19, BAC CTC-512J12 (BC347040), complete sequence Length = 176928 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 306 tccttccatgttgctgcaga 325 |||||||||||||||||||| Sbjct: 150755 tccttccatgttgctgcaga 150736
>gb|AC138473.1| Homo sapiens chromosome 19 clone CTC-512J12, complete sequence Length = 176918 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 306 tccttccatgttgctgcaga 325 |||||||||||||||||||| Sbjct: 150746 tccttccatgttgctgcaga 150727
>emb|BX470223.14| Zebrafish DNA sequence from clone DKEY-45P9 in linkage group 10, complete sequence Length = 247644 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 332 aaataaataataatttaata 351 |||||||||||||||||||| Sbjct: 47697 aaataaataataatttaata 47716
>emb|AL954845.21| Zebrafish DNA sequence from clone DKEY-30H3, complete sequence Length = 226343 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 332 aaataaataataatttaata 351 |||||||||||||||||||| Sbjct: 177231 aaataaataataatttaata 177212
>dbj|AP005761.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:B1066D09 Length = 183999 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 332 aaataaataataatttaata 351 |||||||||||||||||||| Sbjct: 140134 aaataaataataatttaata 140115
>dbj|AB126005.1| Orthetrum triangulare melania mitochondrial DNA, nearly complete genome except some genes Length = 14033 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 332 aaataaataataatttaata 351 |||||||||||||||||||| Sbjct: 3437 aaataaataataatttaata 3418
>emb|AL954187.5| Zebrafish DNA sequence from clone CH211-69P5 in linkage group 15, complete sequence Length = 185137 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 332 aaataaataataatttaata 351 |||||||||||||||||||| Sbjct: 158853 aaataaataataatttaata 158872
>emb|AL772133.30| Zebrafish DNA sequence from clone CH211-121J5 in linkage group 9, complete sequence Length = 180967 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 325 aacagagaaataaataataattta 348 |||||| ||||||||||||||||| Sbjct: 83299 aacagacaaataaataataattta 83276
>emb|CR354399.24| Zebrafish DNA sequence from clone CH211-233B23 in linkage group 8, complete sequence Length = 164386 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 332 aaataaataataatttaata 351 |||||||||||||||||||| Sbjct: 20548 aaataaataataatttaata 20529
>emb|BX537308.18| Zebrafish DNA sequence from clone DKEY-231A18 in linkage group 4, complete sequence Length = 191880 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 371 taaagccacttacagtgtatttta 394 ||||| |||||||||||||||||| Sbjct: 127043 taaagacacttacagtgtatttta 127066
>emb|BX469886.5| Zebrafish DNA sequence from clone CH211-127D20 in linkage group 19, complete sequence Length = 151598 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 459 gtgacatttctgttttctttgttc 482 ||||||||||| |||||||||||| Sbjct: 77918 gtgacatttctcttttctttgttc 77941
>gb|AE003701.2| Drosophila melanogaster chromosome 3R, section 39 of 118 of the complete sequence Length = 208368 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 332 aaataaataataatttaata 351 |||||||||||||||||||| Sbjct: 134702 aaataaataataatttaata 134683
>gb|AC115699.9| Mus musculus chromosome 15, clone RP24-247B18, complete sequence Length = 169003 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 326 acagagaaataaataataat 345 |||||||||||||||||||| Sbjct: 111089 acagagaaataaataataat 111070
>dbj|AP005716.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1445E9, complete sequence Length = 151880 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 325 aacagagaaataaataataa 344 |||||||||||||||||||| Sbjct: 102087 aacagagaaataaataataa 102068
>gb|AE017126.1| Prochlorococcus marinus subsp. marinus str. CCMP1375 complete genome Length = 1751080 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 337 aataataatttaatagttct 356 |||||||||||||||||||| Sbjct: 1489559 aataataatttaatagttct 1489578
>gb|AC170746.3| Loxodonta africana clone VMRC15-355K9, complete sequence Length = 122744 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 382 acagtgtattttaagaacag 401 |||||||||||||||||||| Sbjct: 95896 acagtgtattttaagaacag 95877
>gb|AC005274.1|AC005274 Homo sapiens chromosome 17, clone hRPK.1090_M_7, complete sequence Length = 205150 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 259 tctttcaggcccagttcttc 278 |||||||||||||||||||| Sbjct: 28756 tctttcaggcccagttcttc 28775
>gb|AC140305.3| Mus musculus BAC clone RP23-425A11 from 6, complete sequence Length = 190535 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 462 acatttctgttttctttgtt 481 |||||||||||||||||||| Sbjct: 53628 acatttctgttttctttgtt 53647
>gb|AF025422.1|AF025422 Homo sapiens chromosome 19 cosmid F15386, genomic sequence, complete sequence Length = 38000 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 306 tccttccatgttgctgcaga 325 |||||||||||||||||||| Sbjct: 21613 tccttccatgttgctgcaga 21632
>emb|AL954326.7| Zebrafish DNA sequence from clone DKEY-28N4, complete sequence Length = 147387 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 332 aaataaataataatttaata 351 |||||||||||||||||||| Sbjct: 53750 aaataaataataatttaata 53769
>dbj|AP006627.1| Bacillus clausii KSM-K16 DNA, complete genome Length = 4303871 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 453 aataaggtgacatttctgtt 472 |||||||||||||||||||| Sbjct: 4056737 aataaggtgacatttctgtt 4056718
>emb|CT025583.7| Mouse DNA sequence from clone RP24-68O11 on chromosome 14, complete sequence Length = 201727 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 464 atttctgttttctttgttca 483 |||||||||||||||||||| Sbjct: 61175 atttctgttttctttgttca 61194
>gb|AC000113.1|HSAC000113 Human PAC clone DJ302C05 from Xq23, complete sequence Length = 135672 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 464 atttctgttttctttgttca 483 |||||||||||||||||||| Sbjct: 12236 atttctgttttctttgttca 12255
>emb|AL139193.4|CNS01DXA Human chromosome 14 DNA sequence BAC R-661G16 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 162691 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 398 acagtacacaagatcaattt 417 |||||||||||||||||||| Sbjct: 127970 acagtacacaagatcaattt 127989
>emb|AL034384.1|HSMTM0 Human chromosome Xq28, cosmid clones 7H3, 14D7, C1230, 11E7, F1096, A12197, 12G8, A09100; complete sequence bases 1..217657 Length = 217657 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 332 aaataaataataatttaata 351 |||||||||||||||||||| Sbjct: 156211 aaataaataataatttaata 156192 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7,116,403 Number of Sequences: 3902068 Number of extensions: 7116403 Number of successful extensions: 170113 Number of sequences better than 10.0: 99 Number of HSP's better than 10.0 without gapping: 99 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 169662 Number of HSP's gapped (non-prelim): 451 length of query: 516 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 493 effective length of database: 17,143,297,704 effective search space: 8451645768072 effective search space used: 8451645768072 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)