>FMN2_MOUSE (Q9JL04) Formin-2|
          Length = 1567

 Score = 30.4 bits (67), Expect = 4.7
 Identities = 19/56 (33%), Positives = 26/56 (46%)
 Frame = +1

Query: 406 DGVL*RNRGERACGCSHQGGSADDGGGVTCQRVPRQRQLQTPAGGVSGAVGSRWRG 573
           DG L R+ G+     SH+GG A+D  G      PR  +    A G   A+G   +G
Sbjct: 5   DGKLKRSAGD----ASHEGGGAEDAAG------PRDAETTKKASGSKKALGKHGKG 50

>PWP1_MOUSE (Q99LL5) Periodic tryptophan protein 1 homolog|
          Length = 501

 Score = 30.4 bits (67), Expect = 4.7
 Identities = 19/35 (54%), Positives = 21/35 (60%)
 Frame = -3

Query: 459 LVTAPACSFPSVSLQDAVGDIASLCHSRDMDEGDL 355
           LVTA A  F  V + D +GD  SL HSRDM  G L
Sbjct: 400 LVTASADKF--VKIWDILGDRPSLIHSRDMKMGVL 432

>TAOK2_MOUSE (Q6ZQ29) Serine/threonine-protein kinase TAO2 (EC 2.7.11.1) (Thousand|
            and one amino acid protein 2)
          Length = 1055

 Score = 30.0 bits (66), Expect = 6.2
 Identities = 16/43 (37%), Positives = 17/43 (39%), Gaps = 3/43 (6%)
 Frame = -1

Query: 548  PETPPAGVWSCR*---RGTRWHVTPPPSSAEPPW*LHPHALSP 429
            P  PPA  W  R     G  W   PPP    PP    P  L+P
Sbjct: 940  PAPPPAPAWPSRPVPRSGAHWSHGPPPPGMPPPAWRQPALLAP 982

>TRBL_AGRTU (P54913) Conjugal transfer protein trbL|
          Length = 395

 Score = 30.0 bits (66), Expect = 6.2
 Identities = 25/76 (32%), Positives = 36/76 (47%), Gaps = 2/76 (2%)
 Frame = +1

Query: 424 NRGERACGCSHQGGSADDGGGVTCQRVPRQRQLQTPAGGVSGAVGS--RWRGLHSPNSPA 597
           NRG  A   +  GG++  G  +        R L+   GG +GAVGS  + + + SP + A
Sbjct: 313 NRGFAAASAARAGGASLAGAAM--------RGLEAGVGGAAGAVGSAAKDKAIGSPGAYA 364

Query: 598 G*KGW*SRSSLAKSKL 645
           G     S   LA +KL
Sbjct: 365 G-----SMLGLANAKL 375

>SMAD7_RAT (O88406) Mothers against decapentaplegic homolog 7 (SMAD 7)|
           (Mothers against DPP homolog 7) (Smad7)
          Length = 426

 Score = 29.6 bits (65), Expect = 8.0
 Identities = 12/36 (33%), Positives = 18/36 (50%)
 Frame = -3

Query: 216 PQINHQASLSRLACSSTYGMSRHSNVPCPPYARSRV 109
           P + H + + RL C  +YG      V C P+  SR+
Sbjct: 166 PDLRHSSEVKRLCCCESYGKINPELVCCNPHHLSRL 201

>SMAD7_MOUSE (O35253) Mothers against decapentaplegic homolog 7 (SMAD 7)|
           (Mothers against DPP homolog 7) (Smad7) (Madh8)
          Length = 426

 Score = 29.6 bits (65), Expect = 8.0
 Identities = 12/36 (33%), Positives = 18/36 (50%)
 Frame = -3

Query: 216 PQINHQASLSRLACSSTYGMSRHSNVPCPPYARSRV 109
           P + H + + RL C  +YG      V C P+  SR+
Sbjct: 166 PDLRHSSEVKRLCCCESYGKINPELVCCNPHHLSRL 201

>SMAD7_HUMAN (O15105) Mothers against decapentaplegic homolog 7 (SMAD 7)|
           (Mothers against DPP homolog 7) (Smad7) (hSMAD7)
          Length = 426

 Score = 29.6 bits (65), Expect = 8.0
 Identities = 12/36 (33%), Positives = 18/36 (50%)
 Frame = -3

Query: 216 PQINHQASLSRLACSSTYGMSRHSNVPCPPYARSRV 109
           P + H + + RL C  +YG      V C P+  SR+
Sbjct: 166 PDLRHSSEVKRLCCCESYGKINPELVCCNPHHLSRL 201


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 96,903,319
Number of Sequences: 219361
Number of extensions: 2127312
Number of successful extensions: 5995
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 5643
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5986
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6086476506
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)