>IBBWP_MAIZE (P31862) Bowman-Birk type wound-induced proteinase inhibitor WIP1|
           precursor
          Length = 102

 Score = 43.5 bits (101), Expect = 4e-04
 Identities = 24/60 (40%), Positives = 26/60 (43%), Gaps = 5/60 (8%)
 Frame = -2

Query: 373 CCNNCR-SFSGVDVCDDAHPQCPTGCSACRVVT----TNPQTFRCADMKATVDGTCGGPC 209
           CC NC  SFSG+  CDD    C   C  C V      +    FRC D   T  G CG  C
Sbjct: 46  CCTNCNFSFSGLYTCDDVKKDCDPVCKKCVVAVHASYSGNNKFRCTD---TFLGMCGPKC 102

>IBB1_ARAHY (P01066) Bowman-Birk type proteinase inhibitor A-II [Contains:|
           Bowman-Birk type proteinase inhibitor A-I; Bowman-Birk
           type proteinase inhibitor B-I; Bowman-Birk type
           proteinase inhibitor B-III]
          Length = 70

 Score = 36.2 bits (82), Expect = 0.056
 Identities = 16/47 (34%), Positives = 19/47 (40%), Gaps = 5/47 (10%)
 Frame = -2

Query: 373 CCNNCRSFSGVD-----VCDDAHPQCPTGCSACRVVTTNPQTFRCAD 248
           CCN C            VC D    CP  C++C    +NP   RC D
Sbjct: 11  CCNGCLCDRRAPPYFECVCVDTFDHCPASCNSCVCTRSNPPQCRCTD 57

>PKSJ_BACSU (P40806) Putative polyketide synthase pksJ (PKS)|
          Length = 5045

 Score = 32.0 bits (71), Expect = 1.1
 Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 3/44 (6%)
 Frame = +3

Query: 222  QVPSTVAFMSAQRNVWGFVV---TTRHAEQPVGHCGWASSQTST 344
            Q+P T  FMSA  N +  ++   TT   E P G+  W  +Q+ T
Sbjct: 1869 QIPQTSVFMSASNNSYRALLPSDTTESLETPDGYVSWVLAQSGT 1912

>LAMA5_HUMAN (O15230) Laminin alpha-5 chain precursor|
          Length = 3695

 Score = 30.8 bits (68), Expect = 2.4
 Identities = 19/59 (32%), Positives = 24/59 (40%), Gaps = 8/59 (13%)
 Frame = -2

Query: 364  NCRSFS-GVDVCDDAHPQC-------PTGCSACRVVTTNPQTFRCADMKATVDGTCGGP 212
            NCR    G  +CD+   QC       P  C  C+     PQTF C  +    +  C GP
Sbjct: 1480 NCRPCDCGARLCDELTGQCICPPRTIPPDCLLCQ-----PQTFGCHPLVGCEECNCSGP 1533

>OSA_DROME (Q8IN94) Trithorax group protein osa (Protein eyelid)|
          Length = 2716

 Score = 30.8 bits (68), Expect = 2.4
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = -1

Query: 452  ARGDSDPPGRPGHGSPLARERRLFPH 375
            A G   PPG PG G+ L ++  +FPH
Sbjct: 1753 APGGYGPPGMPGGGAQLVKKELIFPH 1778

>IBBA_PEA (Q41065) Seed trypsin/chymotrypsin inhibitor IVA precursor (PSTI|
           IVA) (TI12-36) [Contains: Seed trypsin/chymotrypsin
           inhibitor I (PSTI I)] (Fragment)
          Length = 96

 Score = 30.8 bits (68), Expect = 2.4
 Identities = 13/37 (35%), Positives = 16/37 (43%)
 Frame = -2

Query: 331 DDAHPQCPTGCSACRVVTTNPQTFRCADMKATVDGTC 221
           DD    C   C  C    +NP T RC D++ T    C
Sbjct: 26  DDVKSAC---CDTCLCTKSNPPTCRCVDVRETCHSAC 59



 Score = 29.3 bits (64), Expect = 6.9
 Identities = 14/50 (28%), Positives = 20/50 (40%), Gaps = 3/50 (6%)
 Frame = -2

Query: 388 DYFPTCCNNC---RSFSGVDVCDDAHPQCPTGCSACRVVTTNPQTFRCAD 248
           D    CC+ C   +S      C D    C + C +C    +NP   +C D
Sbjct: 27  DVKSACCDTCLCTKSNPPTCRCVDVRETCHSACDSCICAYSNPPKCQCFD 76

>PRIA_LENED (Q01200) Protein priA precursor|
          Length = 258

 Score = 30.4 bits (67), Expect = 3.1
 Identities = 13/37 (35%), Positives = 20/37 (54%)
 Frame = -2

Query: 325 AHPQCPTGCSACRVVTTNPQTFRCADMKATVDGTCGG 215
           A P CP G  AC +  ++   + C D  A ++ +CGG
Sbjct: 176 AVPACPKGLDACPIAGSSLGDYECLDTSAELE-SCGG 211

>YBBO_ECOLI (P0AFP4) Hypothetical oxidoreductase ybbO (EC 1.-.-.-)|
          Length = 269

 Score = 30.4 bits (67), Expect = 3.1
 Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 4/73 (5%)
 Frame = +3

Query: 279 VTTRHAEQPVGHCGWASSQTSTPEKDLQLLQHVGK*SAFTCE----RTPMTRTAWRIRIA 446
           V    +++PV + G A+  T  PE  +  ++H     AF  E    R P+T   W + + 
Sbjct: 200 VNQTQSDKPVENPGIAARFTLGPEAVVDKVRH-----AFISEKPKMRYPVTLVTWAVMVL 254

Query: 447 ASLVPFMVADELL 485
             L+P  V D++L
Sbjct: 255 KRLLPGRVMDKIL 267

>YBBO_ECOL6 (P0AFP5) Hypothetical oxidoreductase ybbO (EC 1.-.-.-)|
          Length = 269

 Score = 30.4 bits (67), Expect = 3.1
 Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 4/73 (5%)
 Frame = +3

Query: 279 VTTRHAEQPVGHCGWASSQTSTPEKDLQLLQHVGK*SAFTCE----RTPMTRTAWRIRIA 446
           V    +++PV + G A+  T  PE  +  ++H     AF  E    R P+T   W + + 
Sbjct: 200 VNQTQSDKPVENPGIAARFTLGPEAVVDKVRH-----AFISEKPKMRYPVTLVTWAVMVL 254

Query: 447 ASLVPFMVADELL 485
             L+P  V D++L
Sbjct: 255 KRLLPGRVMDKIL 267

>MT_ASTFL (P55951) Metallothionein (MT)|
          Length = 58

 Score = 30.4 bits (67), Expect = 3.1
 Identities = 20/59 (33%), Positives = 25/59 (42%), Gaps = 3/59 (5%)
 Frame = -2

Query: 373 CCNNCRSFSGVDVCDDAHPQCPTG--CSACRVVTTNPQTFRC-ADMKATVDGTCGGPCK 206
           CCN        DVC+ A   C TG  C++CR    +  T  C    K     TC  PC+
Sbjct: 5   CCN--------DVCECAAGGCKTGCVCTSCRCSPCDKCTSGCKCPSKEECAKTCSKPCE 55

>IBB_MEDSC (P80321) Bowman-Birk type proteinase inhibitor (MSTI)|
          Length = 62

 Score = 30.4 bits (67), Expect = 3.1
 Identities = 14/46 (30%), Positives = 20/46 (43%), Gaps = 3/46 (6%)
 Frame = -2

Query: 373 CCNNC---RSFSGVDVCDDAHPQCPTGCSACRVVTTNPQTFRCADM 245
           CC+ C   RS      C D   +C + C +C    + P   RC D+
Sbjct: 8   CCDFCPCTRSIPPQCQCTDVREKCHSACKSCLCTRSFPPQCRCYDI 53

>IBB_DOLBI (Q9S9E3) Horsegram inhibitor 1 (Horsegram inhibitor I) (Bowman-Birk|
           type proteinase inhibitor HGI-I) [Contains: Horsegram
           germinated inhibitor 1 (Horsegram germinated inhibitor
           I) (HGGI-I); Horsegram germinated inhibitor 2 (Horsegram
           germinated
          Length = 76

 Score = 30.4 bits (67), Expect = 3.1
 Identities = 18/60 (30%), Positives = 23/60 (38%), Gaps = 4/60 (6%)
 Frame = -2

Query: 373 CCNNCRSFSGVDV---CDDAH-PQCPTGCSACRVVTTNPQTFRCADMKATVDGTCGGPCK 206
           CC+ C     +     C D     C + CS+C    + P    C DMK      C  PCK
Sbjct: 16  CCDQCTCTKSIPPQCRCTDVRLNSCHSACSSCVCTFSIPAQCVCVDMK----DFCYAPCK 71

>IBB3_DOLAX (P01057) Bowman-Birk type proteinase inhibitor DE-3|
          Length = 76

 Score = 30.4 bits (67), Expect = 3.1
 Identities = 18/60 (30%), Positives = 23/60 (38%), Gaps = 4/60 (6%)
 Frame = -2

Query: 373 CCNNCRSFSGVDV---CDDAH-PQCPTGCSACRVVTTNPQTFRCADMKATVDGTCGGPCK 206
           CC+ C     +     C D     C + CS+C    + P    C DMK      C  PCK
Sbjct: 16  CCDECACTKSIPPQCRCTDVRLNSCHSACSSCVCTFSIPAQCVCVDMK----DFCYAPCK 71

>IBB_LENCU (Q8W4Y8) Bowman-Birk type proteinase inhibitor precursor|
           (Trypsin/chymotrypsin inhibitor)
          Length = 110

 Score = 30.0 bits (66), Expect = 4.0
 Identities = 15/50 (30%), Positives = 19/50 (38%), Gaps = 3/50 (6%)
 Frame = -2

Query: 388 DYFPTCCNNC---RSFSGVDVCDDAHPQCPTGCSACRVVTTNPQTFRCAD 248
           D    CC+ C   RS      C D    C + C  C    +NP   +C D
Sbjct: 45  DVKSACCDTCLCTRSQPPTCRCVDVRESCHSACDKCVCAYSNPPQCQCYD 94

>IBBWT_MEDSA (P16346) Bowman-Birk type wound-induced trypsin inhibitor|
          Length = 58

 Score = 30.0 bits (66), Expect = 4.0
 Identities = 15/46 (32%), Positives = 18/46 (39%), Gaps = 3/46 (6%)
 Frame = -2

Query: 373 CCNNC---RSFSGVDVCDDAHPQCPTGCSACRVVTTNPQTFRCADM 245
           CCN C   RS      C D    C + C  C    + P    CAD+
Sbjct: 4   CCNFCPCTRSIPPQCRCTDIGETCHSACKTCLCTKSIPPQCHCADI 49

>MVHD_METTH (Q50781) F420-non-reducing hydrogenase iron-sulfur subunit D (EC|
           1.12.99.-) (Methyl viologen-reducing hydrogenase delta
           subunit) (MVH subunit D)
          Length = 140

 Score = 29.6 bits (65), Expect = 5.3
 Identities = 27/86 (31%), Positives = 35/86 (40%), Gaps = 11/86 (12%)
 Frame = -2

Query: 373 CCNNCRSFSGVDVCDDAHPQCPTGCSACRVVTT---NPQ----TFRCADMKATVDGTCGG 215
           CCN C S+ G D    A  Q PT     RV+ +    PQ     FR       V G   G
Sbjct: 11  CCNWC-SYGGADTAGTARMQYPTNIRVIRVMCSGRIEPQFVLKAFREGADGVLVTGCHHG 69

Query: 214 PCK----KY*SAQAHMRLLFRLAPKI 149
            C      Y      MRL+++LA ++
Sbjct: 70  DCHYDAGNY-KLDRRMRLIYKLADEL 94

>LAMA5_MOUSE (Q61001) Laminin alpha-5 chain precursor|
          Length = 3718

 Score = 29.6 bits (65), Expect = 5.3
 Identities = 18/59 (30%), Positives = 24/59 (40%), Gaps = 8/59 (13%)
 Frame = -2

Query: 364  NCRSFS-GVDVCDDAHPQC-------PTGCSACRVVTTNPQTFRCADMKATVDGTCGGP 212
            NCR    G  +CD+   QC       P  C  C+     PQ+F C  +    +  C GP
Sbjct: 1485 NCRPCDCGARLCDELTGQCICPPRTVPPDCLVCQ-----PQSFGCHPLVGCEECNCSGP 1538

>LRP1_CHICK (P98157) Low-density lipoprotein receptor-related protein 1 precursor|
            (LRP) (Alpha-2-macroglobulin receptor) (A2MR)
          Length = 4543

 Score = 29.3 bits (64), Expect = 6.9
 Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 3/42 (7%)
 Frame = -2

Query: 370  CNNCRSFSGVDVCDDAHPQCPTGC---SACRVVTTNPQTFRC 254
            CNN R  S + VCD A   C  G    S CR+ T +  +F+C
Sbjct: 2739 CNNHRCISKLWVCDGA-DDCGDGSDEDSRCRLTTCSTGSFQC 2779

>PCSK5_BRACL (Q9NJ15) Proprotein convertase subtilisin/kexin type 5 precursor (EC|
            3.4.21.-) (Proprotein convertase PC6-like) (aPC6)
          Length = 1696

 Score = 29.3 bits (64), Expect = 6.9
 Identities = 18/55 (32%), Positives = 20/55 (36%)
 Frame = -2

Query: 385  YFPTCCNNCRSFSGVDVCDDAHPQCPTGCSACRVVTTNPQTFRCADMKATVDGTC 221
            Y  TC   C      D  D     C  GC AC     N  T  C + +A  DG C
Sbjct: 954  YQGTCHVTCPPGLYGDTTDQVCKACAPGCIACDGPADNQCTL-CEEERAPTDGRC 1007

>RS4_METTH (O26142) 30S ribosomal protein S4P|
          Length = 171

 Score = 29.3 bits (64), Expect = 6.9
 Identities = 20/65 (30%), Positives = 36/65 (55%), Gaps = 6/65 (9%)
 Frame = +3

Query: 3   LLSRHAQYSRGIFLEKETTVTKTRRNSIHIVG----HTHTHRQDESGHLIRAFIL--GAK 164
           L++++   ++    + ET V + RR++ +++G    HT   R+   GHL+R  IL  GAK
Sbjct: 29  LVAKYGLKNKKEVWKAETMVRRYRRDARYLLGMASEHTGKEREQLLGHLVRTGILNEGAK 88

Query: 165 RNNSL 179
             + L
Sbjct: 89  LEDVL 93

>IBBB_PEA (P56679) Seed trypsin/chymotrypsin inhibitor IVB (PSTI-IVB)|
           [Contains: Seed trypsin/chymotrypsin inhibitor II (PSTI
           II)]
          Length = 72

 Score = 29.3 bits (64), Expect = 6.9
 Identities = 13/37 (35%), Positives = 15/37 (40%)
 Frame = -2

Query: 331 DDAHPQCPTGCSACRVVTTNPQTFRCADMKATVDGTC 221
           DD    C   C  C    +NP T RC D+  T    C
Sbjct: 2   DDVKSAC---CDTCLCTKSNPPTCRCVDVGETCHSAC 35

>FER2_SULTO (P58331) Zinc-containing ferredoxin-2|
          Length = 103

 Score = 28.9 bits (63), Expect = 9.0
 Identities = 11/28 (39%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
 Frame = -1

Query: 488 HEEFISNHEGHQARGDSDPPGRPG-HGS 408
           + + +  HEGH+  G  +PPG+ G HG+
Sbjct: 9   NRQVVGEHEGHKIYGPVEPPGKLGIHGT 36


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 73,076,924
Number of Sequences: 219361
Number of extensions: 1453055
Number of successful extensions: 4619
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 4132
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4614
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 3970331829
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)