Clone Name | rbasd3b20 |
---|---|
Clone Library Name | barley_pub |
>ref|XM_478627.1| Oryza sativa (japonica cultivar-group), mRNA Length = 847 Score = 54.0 bits (27), Expect = 1e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 67 ctagcctagcttggcgaggacatcgcc 93 ||||||||||||||||||||||||||| Sbjct: 713 ctagcctagcttggcgaggacatcgcc 687
>ref|XM_506400.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1582_D10.6 mRNA Length = 962 Score = 54.0 bits (27), Expect = 1e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 67 ctagcctagcttggcgaggacatcgcc 93 ||||||||||||||||||||||||||| Sbjct: 713 ctagcctagcttggcgaggacatcgcc 687
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 54.0 bits (27), Expect = 1e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 67 ctagcctagcttggcgaggacatcgcc 93 ||||||||||||||||||||||||||| Sbjct: 21522205 ctagcctagcttggcgaggacatcgcc 21522179
>dbj|AP003838.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1582_D10 Length = 103475 Score = 54.0 bits (27), Expect = 1e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 67 ctagcctagcttggcgaggacatcgcc 93 ||||||||||||||||||||||||||| Sbjct: 59989 ctagcctagcttggcgaggacatcgcc 59963
>dbj|AK099127.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023045A04, full insert sequence Length = 847 Score = 54.0 bits (27), Expect = 1e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 67 ctagcctagcttggcgaggacatcgcc 93 ||||||||||||||||||||||||||| Sbjct: 713 ctagcctagcttggcgaggacatcgcc 687
>dbj|AK069170.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023004I02, full insert sequence Length = 962 Score = 54.0 bits (27), Expect = 1e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 67 ctagcctagcttggcgaggacatcgcc 93 ||||||||||||||||||||||||||| Sbjct: 713 ctagcctagcttggcgaggacatcgcc 687
>dbj|AK058793.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-002-G03, full insert sequence Length = 688 Score = 54.0 bits (27), Expect = 1e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 67 ctagcctagcttggcgaggacatcgcc 93 ||||||||||||||||||||||||||| Sbjct: 582 ctagcctagcttggcgaggacatcgcc 556
>emb|Z26824.1|ZMFNRBP Zea mays gene for Ferredoxin-NADP reductase binding protein Length = 1760 Score = 48.1 bits (24), Expect = 0.007 Identities = 27/28 (96%) Strand = Plus / Minus Query: 66 tctagcctagcttggcgaggacatcgcc 93 ||||||||||||||||||| |||||||| Sbjct: 1660 tctagcctagcttggcgagaacatcgcc 1633
>gb|AY103825.1| Zea mays PCO072668 mRNA sequence Length = 1009 Score = 48.1 bits (24), Expect = 0.007 Identities = 27/28 (96%) Strand = Plus / Minus Query: 66 tctagcctagcttggcgaggacatcgcc 93 ||||||||||||||||||| |||||||| Sbjct: 758 tctagcctagcttggcgagaacatcgcc 731
>gb|M87435.1|ZEAOE17 Zea mays precursor of the oxygen evolving complex 17 kDa protein mRNA, complete cds Length = 810 Score = 48.1 bits (24), Expect = 0.007 Identities = 27/28 (96%) Strand = Plus / Minus Query: 66 tctagcctagcttggcgaggacatcgcc 93 ||||||||||||||||||| |||||||| Sbjct: 702 tctagcctagcttggcgagaacatcgcc 675
>emb|BX855598.22| Zebrafish DNA sequence from clone DKEY-52J13 in linkage group 13, complete sequence Length = 209449 Score = 42.1 bits (21), Expect = 0.43 Identities = 21/21 (100%) Strand = Plus / Minus Query: 10 caaatatgaacaaaacataaa 30 ||||||||||||||||||||| Sbjct: 152189 caaatatgaacaaaacataaa 152169
>gb|AC021498.12| Homo sapiens chromosome 8, clone RP11-127H5, complete sequence Length = 160883 Score = 42.1 bits (21), Expect = 0.43 Identities = 21/21 (100%) Strand = Plus / Minus Query: 14 tatgaacaaaacataaaaggc 34 ||||||||||||||||||||| Sbjct: 99002 tatgaacaaaacataaaaggc 98982
>emb|BX842696.13| Zebrafish DNA sequence from clone DKEY-165P1 in linkage group 13, complete sequence Length = 216185 Score = 42.1 bits (21), Expect = 0.43 Identities = 21/21 (100%) Strand = Plus / Minus Query: 10 caaatatgaacaaaacataaa 30 ||||||||||||||||||||| Sbjct: 32572 caaatatgaacaaaacataaa 32552
>dbj|AP004711.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1568A9, complete sequence Length = 150485 Score = 42.1 bits (21), Expect = 0.43 Identities = 21/21 (100%) Strand = Plus / Minus Query: 14 tatgaacaaaacataaaaggc 34 ||||||||||||||||||||| Sbjct: 92393 tatgaacaaaacataaaaggc 92373
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 40.1 bits (20), Expect = 1.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 110 tcgccgtagtacttctcggc 129 |||||||||||||||||||| Sbjct: 2698418 tcgccgtagtacttctcggc 2698399
>emb|AL161734.12| Human DNA sequence from clone RP11-33M22 on chromosome 1q25.2-31.2 Contains the 3' end of the CACNA1E gene for calcium channel voltage-dependent alpha 1E subunit, complete sequence Length = 167099 Score = 40.1 bits (20), Expect = 1.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 7 ttccaaatatgaacaaaacataaa 30 ||||||||||||||||||| |||| Sbjct: 83834 ttccaaatatgaacaaaacttaaa 83857
>emb|X06826.2|ATVIRB Agrobacterium tumefaciens plasmid pTil5955 Length = 42775 Score = 40.1 bits (20), Expect = 1.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 74 agcttggcgaggacatcgccgaga 97 ||||||||||||||||| |||||| Sbjct: 20165 agcttggcgaggacatcaccgaga 20142
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 40.1 bits (20), Expect = 1.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 110 tcgccgtagtacttctcggc 129 |||||||||||||||||||| Sbjct: 1685036 tcgccgtagtacttctcggc 1685055
>gb|AF242881.1|AF242881 Agrobacterium tumefaciens octopine-type Ti plasmid, complete sequence Length = 194140 Score = 40.1 bits (20), Expect = 1.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 74 agcttggcgaggacatcgccgaga 97 ||||||||||||||||| |||||| Sbjct: 163634 agcttggcgaggacatcaccgaga 163611
>gb|AF223391.1|AF239258S3 Homo sapiens calcium channel alpha1E subunit (CACNA1E) gene, exons 7-49, and partial cds, alternatively spliced Length = 316704 Score = 40.1 bits (20), Expect = 1.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 7 ttccaaatatgaacaaaacataaa 30 ||||||||||||||||||| |||| Sbjct: 241588 ttccaaatatgaacaaaacttaaa 241611
>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome Length = 2595221 Score = 40.1 bits (20), Expect = 1.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 79 ggcgaggacatcgccgagaa 98 |||||||||||||||||||| Sbjct: 1695163 ggcgaggacatcgccgagaa 1695182
>gb|AC153974.9| Mus musculus 10 BAC RP24-462I5 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 162977 Score = 38.2 bits (19), Expect = 6.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 48 ggccattatgtggatccat 66 ||||||||||||||||||| Sbjct: 132339 ggccattatgtggatccat 132321
>gb|AC140680.4| Mus musculus BAC clone RP24-548A12 from chromosome Y, complete sequence Length = 222176 Score = 38.2 bits (19), Expect = 6.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 20 caaaacataaaaggcctga 38 ||||||||||||||||||| Sbjct: 211506 caaaacataaaaggcctga 211488
>ref|XM_954053.1| Neurospora crassa OR74A hypothetical protein (NCU09202.1) partial mRNA Length = 1737 Score = 38.2 bits (19), Expect = 6.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 82 gaggacatcgccgagaaca 100 ||||||||||||||||||| Sbjct: 232 gaggacatcgccgagaaca 250
>ref|XM_331593.1| Neurospora crassa OR74A hypothetical protein (NCU09202.1) partial mRNA Length = 1737 Score = 38.2 bits (19), Expect = 6.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 82 gaggacatcgccgagaaca 100 ||||||||||||||||||| Sbjct: 232 gaggacatcgccgagaaca 250
>gb|AC141875.4| Mus musculus BAC clone RP24-316O22 from chromosome Y, complete sequence Length = 170988 Score = 38.2 bits (19), Expect = 6.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 20 caaaacataaaaggcctga 38 ||||||||||||||||||| Sbjct: 149381 caaaacataaaaggcctga 149363
>gb|AC140678.2| Mus musculus BAC clone RP24-553I16 from chromosome Y, complete sequence Length = 161612 Score = 38.2 bits (19), Expect = 6.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 20 caaaacataaaaggcctga 38 ||||||||||||||||||| Sbjct: 123552 caaaacataaaaggcctga 123534
>gb|AC129192.4| Mus musculus BAC clone RP24-113B19 from chromosome 5, complete sequence Length = 170410 Score = 38.2 bits (19), Expect = 6.7 Identities = 22/23 (95%) Strand = Plus / Minus Query: 11 aaatatgaacaaaacataaaagg 33 ||||||||||| ||||||||||| Sbjct: 146255 aaatatgaacagaacataaaagg 146233
>gb|AC122295.4| Mus musculus BAC clone RP23-263E3 from 13, complete sequence Length = 200289 Score = 38.2 bits (19), Expect = 6.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 15 atgaacaaaacataaaagg 33 ||||||||||||||||||| Sbjct: 181814 atgaacaaaacataaaagg 181832
>gb|AC122924.2| Mus musculus BAC clone RP23-39M16 from 12, complete sequence Length = 228614 Score = 38.2 bits (19), Expect = 6.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 10 caaatatgaacaaaacata 28 ||||||||||||||||||| Sbjct: 65810 caaatatgaacaaaacata 65792
>gb|AC124521.2| Mus musculus BAC clone RP23-395M9 from 5, complete sequence Length = 184380 Score = 38.2 bits (19), Expect = 6.7 Identities = 22/23 (95%) Strand = Plus / Minus Query: 11 aaatatgaacaaaacataaaagg 33 ||||||||| ||||||||||||| Sbjct: 17834 aaatatgaataaaacataaaagg 17812
>gb|AC110259.17| Mus musculus chromosome 5, clone RP23-287A8, complete sequence Length = 230585 Score = 38.2 bits (19), Expect = 6.7 Identities = 22/23 (95%) Strand = Plus / Plus Query: 11 aaatatgaacaaaacataaaagg 33 ||||||||| ||||||||||||| Sbjct: 36778 aaatatgaataaaacataaaagg 36800
>gb|AC146704.8| Medicago truncatula clone mth2-107f11, complete sequence Length = 116591 Score = 38.2 bits (19), Expect = 6.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 15 atgaacaaaacataaaagg 33 ||||||||||||||||||| Sbjct: 73039 atgaacaaaacataaaagg 73057
>gb|AC137971.4| Mus musculus, clone RP23-135B1, complete sequence Length = 224801 Score = 38.2 bits (19), Expect = 6.7 Identities = 22/23 (95%) Strand = Plus / Minus Query: 11 aaatatgaacaaaacataaaagg 33 ||||||||||| ||||||||||| Sbjct: 176516 aaatatgaacagaacataaaagg 176494
>emb|BX295539.1|NCB1D14 Neurospora crassa genomic DNA, BAC contig B1D14 Length = 138898 Score = 38.2 bits (19), Expect = 6.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 82 gaggacatcgccgagaaca 100 ||||||||||||||||||| Sbjct: 57790 gaggacatcgccgagaaca 57808
>emb|AL096788.1|SPBC582 S.pombe chromosome II cosmid c582 Length = 27999 Score = 38.2 bits (19), Expect = 6.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 23 aacataaaaggcctgaaag 41 ||||||||||||||||||| Sbjct: 8690 aacataaaaggcctgaaag 8708
>emb|BX511195.5| Zebrafish DNA sequence from clone DKEYP-57D12 in linkage group 17, complete sequence Length = 79527 Score = 38.2 bits (19), Expect = 6.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 10 caaatatgaacaaaacata 28 ||||||||||||||||||| Sbjct: 76706 caaatatgaacaaaacata 76688
>gb|AC153549.5| Mus musculus 10 BAC RP23-222O23 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 217249 Score = 38.2 bits (19), Expect = 6.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 48 ggccattatgtggatccat 66 ||||||||||||||||||| Sbjct: 171607 ggccattatgtggatccat 171625
>gb|AC091966.3| Homo sapiens chromosome 5 clone RP11-489E3, complete sequence Length = 91296 Score = 38.2 bits (19), Expect = 6.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 13 atatgaacaaaacataaaa 31 ||||||||||||||||||| Sbjct: 23999 atatgaacaaaacataaaa 24017
>gb|AC083813.29| Homo sapiens 12q BAC RP11-304C10 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 216123 Score = 38.2 bits (19), Expect = 6.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 22 aaacataaaaggcctgaaa 40 ||||||||||||||||||| Sbjct: 155085 aaacataaaaggcctgaaa 155067
>gb|AC091894.2| Homo sapiens chromosome 5 clone RP11-138J23, complete sequence Length = 175552 Score = 38.2 bits (19), Expect = 6.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 13 atatgaacaaaacataaaa 31 ||||||||||||||||||| Sbjct: 15810 atatgaacaaaacataaaa 15792
>emb|BX664616.16| Zebrafish DNA sequence from clone DKEY-231P15 in linkage group 8, complete sequence Length = 193090 Score = 38.2 bits (19), Expect = 6.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 10 caaatatgaacaaaacata 28 ||||||||||||||||||| Sbjct: 31469 caaatatgaacaaaacata 31487
>gb|AC147620.5| Mus musculus BAC clone RP24-285H21 from chromosome 13, complete sequence Length = 172051 Score = 38.2 bits (19), Expect = 6.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 15 atgaacaaaacataaaagg 33 ||||||||||||||||||| Sbjct: 129186 atgaacaaaacataaaagg 129168
>emb|BX005102.6| Zebrafish DNA sequence from clone CH211-105H13 in linkage group 8, complete sequence Length = 154770 Score = 38.2 bits (19), Expect = 6.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 10 caaatatgaacaaaacata 28 ||||||||||||||||||| Sbjct: 104208 caaatatgaacaaaacata 104190
>ref|NM_001021080.1| Schizosaccharomyces pombe 972h- hypothetical protein (SPBC582.04c), partial mRNA Length = 1806 Score = 38.2 bits (19), Expect = 6.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 23 aacataaaaggcctgaaag 41 ||||||||||||||||||| Sbjct: 597 aacataaaaggcctgaaag 579
>dbj|AP006878.1| Thermococcus kodakarensis KOD1 DNA, complete genome Length = 2088737 Score = 38.2 bits (19), Expect = 6.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 114 cgtagtacttctcggcctc 132 ||||||||||||||||||| Sbjct: 1142282 cgtagtacttctcggcctc 1142264
>gb|AC016748.3| Homo sapiens BAC clone RP11-494M7 from 2, complete sequence Length = 182776 Score = 38.2 bits (19), Expect = 6.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 22 aaacataaaaggcctgaaa 40 ||||||||||||||||||| Sbjct: 76812 aaacataaaaggcctgaaa 76794
>gb|AC022075.29| Homo sapiens 12 BAC RP11-277P12 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 168351 Score = 38.2 bits (19), Expect = 6.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 21 aaaacataaaaggcctgaa 39 ||||||||||||||||||| Sbjct: 93119 aaaacataaaaggcctgaa 93137
>gb|AC114493.3| Homo sapiens chromosome 1 clone RP11-336O20, complete sequence Length = 179221 Score = 38.2 bits (19), Expect = 6.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 7 ttccaaatatgaacaaaac 25 ||||||||||||||||||| Sbjct: 45183 ttccaaatatgaacaaaac 45201
>gb|AC005157.1|AC005157 Homo sapiens PAC clone RP5-1108A12 from 14q24.3, complete sequence Length = 164275 Score = 38.2 bits (19), Expect = 6.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 28 aaaaggcctgaaagcaaca 46 ||||||||||||||||||| Sbjct: 291 aaaaggcctgaaagcaaca 309
>emb|CR956631.17| M.truncatula DNA sequence from clone MTH2-65L9 on chromosome 3, complete sequence Length = 126227 Score = 38.2 bits (19), Expect = 6.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 14 tatgaacaaaacataaaag 32 ||||||||||||||||||| Sbjct: 120363 tatgaacaaaacataaaag 120381
>dbj|AB088351.1| Gibberella zeae glu, rga genes for putative beta-1,3-glucosidase, putative rhamnogalacturonan acetyltransferase, complete cds Length = 3411 Score = 38.2 bits (19), Expect = 6.7 Identities = 25/27 (92%) Strand = Plus / Plus Query: 111 cgccgtagtacttctcggcctcggtgg 137 ||||| ||||||||||| ||||||||| Sbjct: 153 cgccgaagtacttctcgacctcggtgg 179
>dbj|AP000872.5| Homo sapiens genomic DNA, chromosome 11q clone:RP11-727A20, complete sequences Length = 157330 Score = 38.2 bits (19), Expect = 6.7 Identities = 22/23 (95%) Strand = Plus / Minus Query: 6 cttccaaatatgaacaaaacata 28 ||||||||||||||||| ||||| Sbjct: 98374 cttccaaatatgaacaagacata 98352
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence Length = 2914771 Score = 38.2 bits (19), Expect = 6.7 Identities = 25/27 (92%) Strand = Plus / Plus Query: 103 cttggtctcgccgtagtacttctcggc 129 |||||||| |||||||||||| ||||| Sbjct: 1190113 cttggtcttgccgtagtacttgtcggc 1190139
>dbj|AB026678.1| Gallus gallus Wpkci-8 gene, complete cds Length = 5088 Score = 38.2 bits (19), Expect = 6.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 13 atatgaacaaaacataaaa 31 ||||||||||||||||||| Sbjct: 4039 atatgaacaaaacataaaa 4057
>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome Length = 3551823 Score = 38.2 bits (19), Expect = 6.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 79 ggcgaggacatcgccgaga 97 ||||||||||||||||||| Sbjct: 3502352 ggcgaggacatcgccgaga 3502334
>emb|BX000524.6| Zebrafish DNA sequence from clone DKEY-10H3, complete sequence Length = 188685 Score = 38.2 bits (19), Expect = 6.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 11 aaatatgaacaaaacataa 29 ||||||||||||||||||| Sbjct: 94775 aaatatgaacaaaacataa 94793 Score = 38.2 bits (19), Expect = 6.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 11 aaatatgaacaaaacataa 29 ||||||||||||||||||| Sbjct: 23260 aaatatgaacaaaacataa 23278
>gb|AC148329.3| Mus musculus BAC clone RP24-176F13 from Y, complete sequence Length = 149159 Score = 38.2 bits (19), Expect = 6.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 20 caaaacataaaaggcctga 38 ||||||||||||||||||| Sbjct: 25189 caaaacataaaaggcctga 25171
>gb|AC147029.3| Mus musculus BAC clone RP23-239P5 from 12, complete sequence Length = 194385 Score = 38.2 bits (19), Expect = 6.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 10 caaatatgaacaaaacata 28 ||||||||||||||||||| Sbjct: 92861 caaatatgaacaaaacata 92879
>dbj|AP006372.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT36C05, TM0215b, complete sequence Length = 84914 Score = 38.2 bits (19), Expect = 6.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 18 aacaaaacataaaaggcct 36 ||||||||||||||||||| Sbjct: 66465 aacaaaacataaaaggcct 66483
>dbj|AB026679.1| Gallus gallus Wpkci-7 and Wpkci genes, partial cds Length = 5635 Score = 38.2 bits (19), Expect = 6.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 13 atatgaacaaaacataaaa 31 ||||||||||||||||||| Sbjct: 2543 atatgaacaaaacataaaa 2561 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,083,896 Number of Sequences: 3902068 Number of extensions: 1083896 Number of successful extensions: 85468 Number of sequences better than 10.0: 61 Number of HSP's better than 10.0 without gapping: 61 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 85128 Number of HSP's gapped (non-prelim): 340 length of query: 141 length of database: 17,233,045,268 effective HSP length: 21 effective length of query: 120 effective length of database: 17,151,101,840 effective search space: 2058132220800 effective search space used: 2058132220800 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)