>DCAM_HORCH (Q42829) S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50)|
           (AdoMetDC) (SamDC) [Contains: S-adenosylmethionine
           decarboxylase alpha chain; S-adenosylmethionine
           decarboxylase beta chain]
          Length = 393

 Score =  127 bits (320), Expect = 5e-30
 Identities = 65/73 (89%), Positives = 68/73 (93%), Gaps = 2/73 (2%)
 Frame = -2

Query: 407 ELPCGGVLIYQSFTANEEVAVSAGSPRSVFHCFEGENVESGHPLVKEGKLANLLAWRAEE 228
           ELPCGGVLIYQSF ANEE+AVSAGSPRSVFHCF  ENVESGHPLVKEGKLANLLAWRAEE
Sbjct: 323 ELPCGGVLIYQSFAANEELAVSAGSPRSVFHCF--ENVESGHPLVKEGKLANLLAWRAEE 380

Query: 227 DSLEE--GAVLCE 195
           +SLEE  GA+LCE
Sbjct: 381 ESLEEGTGALLCE 393

>DCAM_ORYSA (O24215) S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50)|
           (AdoMetDC) (SamDC) [Contains: S-adenosylmethionine
           decarboxylase alpha chain; S-adenosylmethionine
           decarboxylase beta chain]
          Length = 398

 Score = 84.3 bits (207), Expect = 6e-17
 Identities = 43/65 (66%), Positives = 50/65 (76%)
 Frame = -2

Query: 407 ELPCGGVLIYQSFTANEEVAVSAGSPRSVFHCFEGENVESGHPLVKEGKLANLLAWRAEE 228
           ELPCGG+LIYQSF A E+V V+ GSP+SV HCFE EN+ +  P VKEGKL NLL W   E
Sbjct: 330 ELPCGGLLIYQSFDATEDVPVAVGSPKSVLHCFEAENMVNPAP-VKEGKLGNLLPW--GE 386

Query: 227 DSLEE 213
           D+LEE
Sbjct: 387 DALEE 391

>DCAM_MAIZE (O24575) S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50)|
           (AdoMetDC) (SamDC) [Contains: S-adenosylmethionine
           decarboxylase alpha chain; S-adenosylmethionine
           decarboxylase beta chain]
          Length = 400

 Score = 79.0 bits (193), Expect = 3e-15
 Identities = 41/68 (60%), Positives = 50/68 (73%), Gaps = 1/68 (1%)
 Frame = -2

Query: 407 ELPCGGVLIYQSFTANEEVAVSAGSPRSVFHCFEGENVESG-HPLVKEGKLANLLAWRAE 231
           ELP GG+L+YQSF A E+    A SP+SVFHCF+GENVES   P+ K+ KLANLL W  E
Sbjct: 330 ELPGGGLLVYQSFCAAEDAV--ATSPKSVFHCFDGENVESAPPPMKKDYKLANLLCWEEE 387

Query: 230 EDSLEEGA 207
            D++EE A
Sbjct: 388 ADAMEEKA 395

>SMI1_YARLI (Q6CDX0) KNR4/SMI1 homolog|
          Length = 713

 Score = 28.9 bits (63), Expect = 3.0
 Identities = 16/47 (34%), Positives = 23/47 (48%)
 Frame = -2

Query: 344 SAGSPRSVFHCFEGENVESGHPLVKEGKLANLLAWRAEEDSLEEGAV 204
           +AGSP S            G P+    +  N+ +W A +DS+ EGAV
Sbjct: 260 NAGSPNSS---------TPGSPVASVARQKNISSWLASQDSVPEGAV 297

>PUR1_SYNY3 (Q55621) Amidophosphoribosyltransferase precursor (EC 2.4.2.14)|
           (Glutamine phosphoribosylpyrophosphate amidotransferase)
           (ATASE) (GPATase)
          Length = 495

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 22/70 (31%), Positives = 31/70 (44%), Gaps = 4/70 (5%)
 Frame = -2

Query: 356 EVAVSAGSPRSVFHCFEGENVESGHPLVKEGKLANLLAWRAEEDSL----EEGAVLCE** 189
           EV +   SP     CF G + +S   L+        +A + E DSL    +EG +LC   
Sbjct: 402 EVHMRISSPPVTHPCFYGIDTDSQDQLIAARLTVAEIAEQIEVDSLAYLSQEGMLLCT-G 460

Query: 188 DDFCCRCSVC 159
           +D    CS C
Sbjct: 461 EDISHFCSAC 470

>RL3_AERPE (Q9YFM2) 50S ribosomal protein L3P|
          Length = 344

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 17/46 (36%), Positives = 22/46 (47%), Gaps = 3/46 (6%)
 Frame = +3

Query: 234 RPPCEQVGK---LAFLDQRVAALHILALEAVEDGPGRPGGDSNLFI 362
           R P   +GK   LAFL  R    H+     V+D PGRP     +F+
Sbjct: 31  RWPEVDIGKPVPLAFLGYRAGMTHVFM---VDDRPGRPTSGKEIFV 73

>FA43B_HUMAN (Q6ZT52) Protein FAM43B|
          Length = 329

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 19/49 (38%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
 Frame = -1

Query: 408 GAPLRGRPHLPELYRE*RGCCLRRVAQVRLPLLRGR-ECGERPPSGQGR 265
           G P R RP +  L RE R C LR       P    R + G R  +GQ R
Sbjct: 281 GVPQRERPEVLSLARELRTCSLRGAPAPPPPAQPRRWKAGPRERAGQAR 329

>OSBP2_HUMAN (Q969R2) Oxysterol-binding protein 2 (Oxysterol-binding|
           protein-related protein 4) (OSBP-related protein 4)
           (ORP-4)
          Length = 916

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 26/92 (28%), Positives = 35/92 (38%)
 Frame = +3

Query: 129 KRQTEVRTNSTDGTATAKIILSLAQHRALLQRILLRPPCEQVGKLAFLDQRVAALHILAL 308
           +R T  R  S       +  L LA+  +   +  L+   EQ   L    +++A  H    
Sbjct: 355 ERATLFRITSNAMINACRDFLELAEIHSRKWQRALQYEQEQRVHLEETIEQLAKQHNSLE 414

Query: 309 EAVEDGPGRPGGDSNLFIRGKALVDEDAPAGE 404
            A    PGRP   S  FI G  L     P GE
Sbjct: 415 RAFHSAPGRPANPSKSFIEGSLL----TPKGE 442


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 51,922,977
Number of Sequences: 219361
Number of extensions: 893157
Number of successful extensions: 2651
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2610
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2647
length of database: 80,573,946
effective HSP length: 111
effective length of database: 56,224,875
effective search space used: 1349397000
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)