>BTG2_HUMAN (P78543) BTG2 protein (NGF-inducible anti-proliferative protein|
           PC3)
          Length = 158

 Score = 30.0 bits (66), Expect = 5.3
 Identities = 14/33 (42%), Positives = 25/33 (75%)
 Frame = +1

Query: 238 ISSDLKTRGCY*QQRVRLYTRGVLKKARAESFK 336
           +SS L+TRGC  +QR+++++ G L++A  E +K
Sbjct: 20  LSSLLRTRGCVSEQRLKVFS-GALQEALTEHYK 51

>MAK5_YEAST (P38112) ATP-dependent RNA helicase MAK5 (EC 3.6.1.-) (Maintenance|
           of killer protein 5)
          Length = 773

 Score = 29.6 bits (65), Expect = 6.9
 Identities = 17/56 (30%), Positives = 27/56 (48%)
 Frame = +1

Query: 97  HSTQTTKHKLHVSSDIKQKKRKNKTVSSS*FRTAHKQPINTSFAGS*ISSDLKTRG 264
           HS+ T K++L      KQ+  K KT++       H  P +   +   I+SD+  RG
Sbjct: 494 HSSMTQKNRLKSLERFKQQSAKQKTIN-------HSNPDSVQLSTVLIASDVAARG 542

>POL_GALV (P21414) Pol polyprotein [Contains: Protease (EC 3.4.23.-); Reverse|
           transcriptase/ribonuclease H (EC 2.7.7.49) (EC 3.1.26.4)
           (RT); Integrase (IN)]
          Length = 1165

 Score = 29.3 bits (64), Expect = 9.0
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = -2

Query: 527 RTLFGGKKPVAPVKPAAETKKPSAVVPD 444
           R L G  KP  P++PA E  +P  + PD
Sbjct: 780 RVLAGTTKPQEPIEPAQEKTRPRELTPD 807

>GBRG3_HUMAN (Q99928) Gamma-aminobutyric-acid receptor gamma-3 subunit precursor|
           (GABA(A) receptor)
          Length = 467

 Score = 29.3 bits (64), Expect = 9.0
 Identities = 15/35 (42%), Positives = 16/35 (45%), Gaps = 4/35 (11%)
 Frame = -1

Query: 534 TLQNLVWWQEASGTCEARC*D----QEAQCCCS*C 442
           TL N V+WQE   TC   C D    Q   CC   C
Sbjct: 390 TLNNSVYWQEFEDTCVYECLDGKDCQSFFCCYEEC 424

>SC11A_RAT (O88457) Sodium channel protein type 11 alpha subunit (Sodium channel|
            protein type XI alpha subunit) (Voltage-gated sodium
            channel alpha subunit Nav1.9) (Sensory neuron sodium
            channel 2) (NaN)
          Length = 1765

 Score = 29.3 bits (64), Expect = 9.0
 Identities = 23/79 (29%), Positives = 41/79 (51%), Gaps = 6/79 (7%)
 Frame = -2

Query: 359  TNSWC---LRILKDSALAFLRTPRVYNRTLCC**QPLVFKSLEIYEPAKLV---LIGCLC 198
            T++WC     I+  S L+ +  P + +       +PL  ++L  +E  K+V   LI  + 
Sbjct: 1097 TSAWCWLDFLIVVVSVLSLMNLPSLKSFRTLRALRPL--RALSQFEGMKVVVYALISAIP 1154

Query: 197  AVLNQLEETVLFFLFFCFI 141
            A+LN L   ++F+L FC +
Sbjct: 1155 AILNVLLVCLIFWLVFCIL 1173


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 66,655,439
Number of Sequences: 219361
Number of extensions: 1050414
Number of successful extensions: 2677
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2592
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2676
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5196311029
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)