ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | rbasd3b08 |
|---|---|
| Clone Library Name | barley_pub |
>emb|Y15962.1|HVGLP1 Hordeum vulgare mRNA for germin-like protein 1 Length = 833 Score = 1241 bits (626), Expect = 0.0 Identities = 655/662 (98%), Gaps = 2/662 (0%) Strand = Plus / Minus Query: 18 ttgacaatcatcaaatgaaattgatatgaaaaattaaacacaacttgaaa-cagactcgg 76 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 814 ttgacaatcatcaaatgaaattgatatgaaaaattaaacacaacttgaaatcagactcgg 755 Query: 77 agttgacctcacaagcgcacgaacacatgcatcaaattaaaccgacacgctgacaccacg 136 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 754 agttgacctcacaagcgcacgaacacatgcatcaaattaaaccgacacgctgacaccacg 695 Query: 137 acgacctttgctgagaactgcttaattagccgctgccgccgagcacggacttgagcttct 196 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 694 acgacctttgctgagaactgcttaattagccgctgccgccgagcacggacttgagcttct 635 Query: 197 tcacctgcgcgtcgtccaagaaggtgaccttctcaaccacggcggatggcaggttgttgg 256 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 634 tcacctgcgcgtcgtccaagaaggtgaccttctcaacgacggcggatggcaggttgttgg 575 Query: 257 cgaagagcgcgtagtcagtgatctggaggcctgggttggggccgctgaacgcaacgagcg 316 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 574 cgaagagcgcgtagtcagtgatctggaggcctgggttggggccgctgaacgcaacgagcg 515 Query: 317 ctaccgccgcggagctgccaccgttgtactggtagtggagcaggccctgggggaacacca 376 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 514 ctaccgccgcggagctgccaccgttgtactggtagtggagcaggccctgggggaacacca 455 Query: 377 tgatgtcgcccttgtagagcgtcttggtgtacacggtgttggaggaggagctgatgaagc 436 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 454 tgatgtcgcccttgtagagcgtcttggtgtacacggtgttggaggaggagctgatgaagc 395 Query: 437 ccgccaagatggtgccctcggttacgaagaggagctcagaggcggccgggtgggtgtgca 496 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 394 ccgccaagatggtgccctcggtgacgaagaggagctcagaggcggccgggtgggtgtgca 335 Query: 497 tcggcacgacgccgcccacggcgatgtcgagcctcgccgcagagatgccgagcccgttca 556 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 334 tcggcacgacgccgcccacggcgatgtcgagcctcgccgcggagatgccgagcccgttca 275 Query: 557 cgccggggaactggccgacgaaggccggggttacggccgccttgatgaggttgcttggtg 616 ||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||| Sbjct: 274 cgccggggaactggccgacgaaggccggggttacgaccgccttgatgaggttgc-tggtg 216 Query: 617 ttgcccgcggcggcgaggccgtggtagtagaagtcccccgcgccgacgccggtcttgcac 676 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 215 ttgcccgcggcggcgagaccgtggtagtagaagtcccccgcgccgacgccggtcttgcac 156 Query: 677 gg 678 || Sbjct: 155 gg 154
>emb|AJ291451.1|HVU291451 Hordeum vulgare mRNA for adenosine diphosphate glucose pyrophosphatase (sagppase gene) Length = 639 Score = 969 bits (489), Expect = 0.0 Identities = 511/517 (98%), Gaps = 1/517 (0%) Strand = Plus / Minus Query: 162 ttagccgctgccgccgagcacggacttgagcttcttcacctgcgcgtcgtccaagaaggt 221 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 639 ttagccgctgccgccgagcacggacttgagcttcttcacctgcgcgtcgtccaagaaggt 580 Query: 222 gaccttctcaaccacggcggatggcaggttgttggcgaagagcgcgtagtcagtgatctg 281 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 579 gaccttctcaacgacggcggatggcaggttgttggcgaagagcgcgtagtcagtgatctg 520 Query: 282 gaggcctgggttggggccgctgaacgcaacgagcgctaccgccgcggagctgccaccgtt 341 |||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||| Sbjct: 519 gaggcctgggttggggccgctgaacgcaacgagcgctaccgcggaggagctgccaccgtt 460 Query: 342 gtactggtagtggagcaggccctgggggaacaccatgatgtcgcccttgtagagcgtctt 401 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 459 gtactggtagtggagcaggccctgggggaacaccatgatgtcgcccttgtagagcgtctt 400 Query: 402 ggtgtacacggtgttggaggaggagctgatgaagcccgccaagatggtgccctcggttac 461 |||||||||||||||||||||||||||||||||||||||||||||||||||||| || || Sbjct: 399 ggtgtacacggtgttggaggaggagctgatgaagcccgccaagatggtgccctcagtgac 340 Query: 462 gaagaggagctcagaggcggccgggtgggtgtgcatcggcacgacgccgcccacggcgat 521 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 339 gaagaggagctcagaggcggccgggtgggtgtgcatcggcacgacgccgcccacggcgat 280 Query: 522 gtcgagcctcgccgcagagatgccgagcccgttcacgccggggaactggccgacgaaggc 581 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 279 gtcgagcctcgccgcagagatgccgagcccgttcacgccggggaactggccgacgaaggc 220 Query: 582 cggggttacggccgccttgatgaggttgcttggtgttgcccgcggcggcgaggccgtggt 641 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 219 cggggttacggccgccttgatgaggttgc-tggtgttgcccgcggcggcgaggccgtggt 161 Query: 642 agtagaagtcccccgcgccgacgccggtcttgcacgg 678 ||||||||||||||||||||||||||||||||||||| Sbjct: 160 agtagaagtcccccgcgccgacgccggtcttgcacgg 124
>emb|AJ319659.1|TAE319659 Triticum aestivum mRNA for adenosine diphosphate glucose pyrophosphatase Length = 642 Score = 827 bits (417), Expect = 0.0 Identities = 493/517 (95%), Gaps = 1/517 (0%) Strand = Plus / Minus Query: 162 ttagccgctgccgccgagcacggacttgagcttcttcacctgcgcgtcgtccaagaaggt 221 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 642 ttagccgctgccgccgagcacggacttgagcttcttcacctgcgcgtcgtccaagaaggt 583 Query: 222 gaccttctcaaccacggcggatggcaggttgttggcgaagagcgcgtagtcagtgatctg 281 |||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 582 gaccttctcaacgacggcggacggcaggttgttggcgaagagcgcgtagtcagtgatctg 523 Query: 282 gaggcctgggttggggccgctgaacgcaacgagcgctaccgccgcggagctgccaccgtt 341 ||||| ||||||||||||||||||||||||||||| ||||| || |||| ||| ||||| Sbjct: 522 caggccggggttggggccgctgaacgcaacgagcgccaccgctgccgagccgccgccgtt 463 Query: 342 gtactggtagtggagcaggccctgggggaacaccatgatgtcgcccttgtagagcgtctt 401 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 462 gtactggtagtggagcaggccctgggggaacaccatgatgtcgcccttgtagagtgtctt 403 Query: 402 ggtgtacacggtgttggaggaggagctgatgaagcccgccaagatggtgccctcggttac 461 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| || Sbjct: 402 ggtgtacacggtgttggaggaggagctgatgaagcccgccaggatggtgccctcggtgac 343 Query: 462 gaagaggagctcagaggcggccgggtgggtgtgcatcggcacgacgccgcccacggcgat 521 || ||||||||||||||||||||||||||||||| ||||||||||||||||| |||||| Sbjct: 342 aaacaggagctcagaggcggccgggtgggtgtgcagcggcacgacgccgcccatggcgat 283 Query: 522 gtcgagcctcgccgcagagatgccgagcccgttcacgccggggaactggccgacgaaggc 581 |||||||||||| || |||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 282 gtcgagcctcgctgcggagatgccgagcccgttcacgccggggaactgcccgacgaaggc 223 Query: 582 cggggttacggccgccttgatgaggttgcttggtgttgcccgcggcggcgaggccgtggt 641 |||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 222 cggggtcacggccgccttgatgaggttgc-tggtgttgcccgcggcggcgaggccgtggt 164 Query: 642 agtagaagtcccccgcgccgacgccggtcttgcacgg 678 ||||||||||||| |||| |||||||| ||||||||| Sbjct: 163 agtagaagtcccctgcgctgacgccggccttgcacgg 127
>gb|AF032975.1|AF032975 Oryza sativa germin-like protein 5 (GER5) mRNA, complete cds Length = 1030 Score = 581 bits (293), Expect = e-162 Identities = 459/513 (89%), Gaps = 1/513 (0%) Strand = Plus / Minus Query: 166 ccgctgccgccgagcacggacttgagcttcttcacctgcgcgtcgtccaagaaggtgacc 225 ||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 741 ccgctaccgccgaggacggacttgagcttcttcacctgcgcgtcgtccaagaaggtgacc 682 Query: 226 ttctcaaccacggcggatggcaggttgttggcgaagagcgcgtagtcagtgatctggagg 285 ||||| || | |||||| |||||||||||||||||||| |||||||| |||||||||||| Sbjct: 681 ttctcgacgatggcggacggcaggttgttggcgaagagggcgtagtcggtgatctggagg 622 Query: 286 cctgggttggggccgctgaacgcaacgagcgctaccgccgcggagctgccaccgttgtac 345 || ||||||||||||||||| || |||||||| |||||||| || ||| |||||||| Sbjct: 621 ccggggttggggccgctgaaggcgacgagcgccaccgccgccgactggccggcgttgtac 562 Query: 346 tggtagtggagcaggccctgggggaacaccatgatgtcgcccttgtagagcgtcttggtg 405 |||||||| || ||||||||||||||||||||||||||||| ||| |||||| ||||| Sbjct: 561 tggtagtgcaggaggccctgggggaacaccatgatgtcgccggcgtacagcgtcctggtg 502 Query: 406 tacacggtgttggaggaggagctgatgaagcccgccaagatggtgccctcggttacgaag 465 || |||||||||||||||||| ||||||| || || || |||||||| ||| ||||| Sbjct: 501 tagacggtgttggaggaggaggtgatgaacccggcggcgacggtgccctgggtgacgaac 442 Query: 466 aggagctcagaggcggccgggtgggtgtgcatcggcacgacgccgcccacggcgatgtcg 525 |||||||| |||||||||||||||||||| | ||||||||||||||| ||||||||||| Sbjct: 441 aggagctcggaggcggccgggtgggtgtggagcggcacgacgccgccgacggcgatgtcc 382 Query: 526 agcctcgccgcagagatgccgagcccgttcacgccggggaactggccgacgaaggccggg 585 ||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 381 agcctcgccgcggagataccgagcccgttcacgccggggaactggccgacgaaggccggg 322 Query: 586 gttacggccgccttgatgaggttgcttggtgttgcccgcggcggcgaggccgtggtagta 645 || ||||| |||||||||||||||| ||||||||||||| || ||||||||||||||| Sbjct: 321 gtcacggcggccttgatgaggttgc-tggtgttgcccgccgccgcgaggccgtggtaggc 263 Query: 646 gaagtcccccgcgccgacgccggtcttgcacgg 678 |||||| || |||||||||| || ||||||||| Sbjct: 262 gaagtcgccggcgccgacgctggccttgcacgg 230
>ref|XM_482788.1| Oryza sativa (japonica cultivar-group), mRNA Length = 938 Score = 573 bits (289), Expect = e-160 Identities = 458/513 (89%), Gaps = 1/513 (0%) Strand = Plus / Minus Query: 166 ccgctgccgccgagcacggacttgagcttcttcacctgcgcgtcgtccaagaaggtgacc 225 ||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 739 ccgctaccgccgaggacggacttgagcttcttcacctgcgcgtcgtccaagaaggtgacc 680 Query: 226 ttctcaaccacggcggatggcaggttgttggcgaagagcgcgtagtcagtgatctggagg 285 ||||| || | |||||| |||||||||||||||||||| |||||||| |||||||||||| Sbjct: 679 ttctcgacgatggcggacggcaggttgttggcgaagagggcgtagtcggtgatctggagg 620 Query: 286 cctgggttggggccgctgaacgcaacgagcgctaccgccgcggagctgccaccgttgtac 345 || ||||||||||||||||| || |||||||| |||||||| || ||| |||||||| Sbjct: 619 ccggggttggggccgctgaaggcgacgagcgccaccgccgccgactggccggcgttgtac 560 Query: 346 tggtagtggagcaggccctgggggaacaccatgatgtcgcccttgtagagcgtcttggtg 405 |||||||| || ||||||||||||||||||||||||||||| ||| |||||| ||||| Sbjct: 559 tggtagtgcaggaggccctgggggaacaccatgatgtcgccggcgtacagcgtcctggtg 500 Query: 406 tacacggtgttggaggaggagctgatgaagcccgccaagatggtgccctcggttacgaag 465 || |||||||||||||||||| ||||||| || || || |||||||| ||| ||||| Sbjct: 499 tagacggtgttggaggaggaggtgatgaacccggcggcgacggtgccctgggtgacgaac 440 Query: 466 aggagctcagaggcggccgggtgggtgtgcatcggcacgacgccgcccacggcgatgtcg 525 |||||||| |||||||||||||||||||| | ||||||||||||||| ||||||||||| Sbjct: 439 aggagctcggaggcggccgggtgggtgtggagcggcacgacgccgccgacggcgatgtcc 380 Query: 526 agcctcgccgcagagatgccgagcccgttcacgccggggaactggccgacgaaggccggg 585 ||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 379 agcctcgccgcggagataccgagcccgttcacgccggggaactggccgacgaaggccggc 320 Query: 586 gttacggccgccttgatgaggttgcttggtgttgcccgcggcggcgaggccgtggtagta 645 || ||||| |||||||||||||||| ||||||||||||| || ||||||||||||||| Sbjct: 319 gtcacggcggccttgatgaggttgc-tggtgttgcccgccgccgcgaggccgtggtaggc 261 Query: 646 gaagtcccccgcgccgacgccggtcttgcacgg 678 |||||| || |||||||||| || ||||||||| Sbjct: 260 gaagtcgccggcgccgacgctggccttgcacgg 228
>ref|XM_507258.1| PREDICTED Oryza sativa (japonica cultivar-group), P0493A04.40 mRNA Length = 994 Score = 573 bits (289), Expect = e-160 Identities = 458/513 (89%), Gaps = 1/513 (0%) Strand = Plus / Minus Query: 166 ccgctgccgccgagcacggacttgagcttcttcacctgcgcgtcgtccaagaaggtgacc 225 ||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 728 ccgctaccgccgaggacggacttgagcttcttcacctgcgcgtcgtccaagaaggtgacc 669 Query: 226 ttctcaaccacggcggatggcaggttgttggcgaagagcgcgtagtcagtgatctggagg 285 ||||| || | |||||| |||||||||||||||||||| |||||||| |||||||||||| Sbjct: 668 ttctcgacgatggcggacggcaggttgttggcgaagagggcgtagtcggtgatctggagg 609 Query: 286 cctgggttggggccgctgaacgcaacgagcgctaccgccgcggagctgccaccgttgtac 345 || ||||||||||||||||| || |||||||| |||||||| || ||| |||||||| Sbjct: 608 ccggggttggggccgctgaaggcgacgagcgccaccgccgccgactggccggcgttgtac 549 Query: 346 tggtagtggagcaggccctgggggaacaccatgatgtcgcccttgtagagcgtcttggtg 405 |||||||| || ||||||||||||||||||||||||||||| ||| |||||| ||||| Sbjct: 548 tggtagtgcaggaggccctgggggaacaccatgatgtcgccggcgtacagcgtcctggtg 489 Query: 406 tacacggtgttggaggaggagctgatgaagcccgccaagatggtgccctcggttacgaag 465 || |||||||||||||||||| ||||||| || || || |||||||| ||| ||||| Sbjct: 488 tagacggtgttggaggaggaggtgatgaacccggcggcgacggtgccctgggtgacgaac 429 Query: 466 aggagctcagaggcggccgggtgggtgtgcatcggcacgacgccgcccacggcgatgtcg 525 |||||||| |||||||||||||||||||| | ||||||||||||||| ||||||||||| Sbjct: 428 aggagctcggaggcggccgggtgggtgtggagcggcacgacgccgccgacggcgatgtcc 369 Query: 526 agcctcgccgcagagatgccgagcccgttcacgccggggaactggccgacgaaggccggg 585 ||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 368 agcctcgccgcggagataccgagcccgttcacgccggggaactggccgacgaaggccggc 309 Query: 586 gttacggccgccttgatgaggttgcttggtgttgcccgcggcggcgaggccgtggtagta 645 || ||||| |||||||||||||||| ||||||||||||| || ||||||||||||||| Sbjct: 308 gtcacggcggccttgatgaggttgc-tggtgttgcccgccgccgcgaggccgtggtaggc 250 Query: 646 gaagtcccccgcgccgacgccggtcttgcacgg 678 |||||| || |||||||||| || ||||||||| Sbjct: 249 gaagtcgccggcgccgacgctggccttgcacgg 217
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 573 bits (289), Expect = e-160 Identities = 458/513 (89%), Gaps = 1/513 (0%) Strand = Plus / Plus Query: 166 ccgctgccgccgagcacggacttgagcttcttcacctgcgcgtcgtccaagaaggtgacc 225 ||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 22551065 ccgctaccgccgaggacggacttgagcttcttcacctgcgcgtcgtccaagaaggtgacc 22551124 Query: 226 ttctcaaccacggcggatggcaggttgttggcgaagagcgcgtagtcagtgatctggagg 285 ||||| || | |||||| |||||||||||||||||||| |||||||| |||||||||||| Sbjct: 22551125 ttctcgacgatggcggacggcaggttgttggcgaagagggcgtagtcggtgatctggagg 22551184 Query: 286 cctgggttggggccgctgaacgcaacgagcgctaccgccgcggagctgccaccgttgtac 345 || ||||||||||||||||| || |||||||| |||||||| || ||| |||||||| Sbjct: 22551185 ccggggttggggccgctgaaggcgacgagcgccaccgccgccgactggccggcgttgtac 22551244 Query: 346 tggtagtggagcaggccctgggggaacaccatgatgtcgcccttgtagagcgtcttggtg 405 |||||||| || ||||||||||||||||||||||||||||| ||| |||||| ||||| Sbjct: 22551245 tggtagtgcaggaggccctgggggaacaccatgatgtcgccggcgtacagcgtcctggtg 22551304 Query: 406 tacacggtgttggaggaggagctgatgaagcccgccaagatggtgccctcggttacgaag 465 || |||||||||||||||||| ||||||| || || || |||||||| ||| ||||| Sbjct: 22551305 tagacggtgttggaggaggaggtgatgaacccggcggcgacggtgccctgggtgacgaac 22551364 Query: 466 aggagctcagaggcggccgggtgggtgtgcatcggcacgacgccgcccacggcgatgtcg 525 |||||||| |||||||||||||||||||| | ||||||||||||||| ||||||||||| Sbjct: 22551365 aggagctcggaggcggccgggtgggtgtggagcggcacgacgccgccgacggcgatgtcc 22551424 Query: 526 agcctcgccgcagagatgccgagcccgttcacgccggggaactggccgacgaaggccggg 585 ||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 22551425 agcctcgccgcggagataccgagcccgttcacgccggggaactggccgacgaaggccggc 22551484 Query: 586 gttacggccgccttgatgaggttgcttggtgttgcccgcggcggcgaggccgtggtagta 645 || ||||| |||||||||||||||| ||||||||||||| || ||||||||||||||| Sbjct: 22551485 gtcacggcggccttgatgaggttgc-tggtgttgcccgccgccgcgaggccgtggtaggc 22551543 Query: 646 gaagtcccccgcgccgacgccggtcttgcacgg 678 |||||| || |||||||||| || ||||||||| Sbjct: 22551544 gaagtcgccggcgccgacgctggccttgcacgg 22551576 Score = 77.8 bits (39), Expect = 4e-11 Identities = 108/131 (82%) Strand = Plus / Plus Query: 244 ggcaggttgttggcgaagagcgcgtagtcagtgatctggaggcctgggttggggccgctg 303 ||||||||||||||||||||||||||||| |||||| ||||| ||||| | || |||| Sbjct: 22546182 ggcaggttgttggcgaagagcgcgtagtcgaggatctgcaggccggggttcgagctgctg 22546241 Query: 304 aacgcaacgagcgctaccgccgcggagctgccaccgttgtactggtagtggagcaggccc 363 |||| ||| ||| ||||||| | | ||| |||||||||| |||||||||||||| Sbjct: 22546242 tacgccgcgaacgccaccgccgtcgtgtcgccggtgttgtactggaagtggagcaggccc 22546301 Query: 364 tgggggaacac 374 || |||||||| Sbjct: 22546302 tgcgggaacac 22546312 Score = 65.9 bits (33), Expect = 2e-07 Identities = 45/49 (91%) Strand = Plus / Plus Query: 464 agaggagctcagaggcggccgggtgggtgtgcatcggcacgacgccgcc 512 |||||||||| ||| ||||||| |||||||||| ||||||||||||||| Sbjct: 22546402 agaggagctcggagccggccggatgggtgtgcagcggcacgacgccgcc 22546450
>dbj|AP004707.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0690E03 Length = 139924 Score = 573 bits (289), Expect = e-160 Identities = 458/513 (89%), Gaps = 1/513 (0%) Strand = Plus / Plus Query: 166 ccgctgccgccgagcacggacttgagcttcttcacctgcgcgtcgtccaagaaggtgacc 225 ||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 24566 ccgctaccgccgaggacggacttgagcttcttcacctgcgcgtcgtccaagaaggtgacc 24625 Query: 226 ttctcaaccacggcggatggcaggttgttggcgaagagcgcgtagtcagtgatctggagg 285 ||||| || | |||||| |||||||||||||||||||| |||||||| |||||||||||| Sbjct: 24626 ttctcgacgatggcggacggcaggttgttggcgaagagggcgtagtcggtgatctggagg 24685 Query: 286 cctgggttggggccgctgaacgcaacgagcgctaccgccgcggagctgccaccgttgtac 345 || ||||||||||||||||| || |||||||| |||||||| || ||| |||||||| Sbjct: 24686 ccggggttggggccgctgaaggcgacgagcgccaccgccgccgactggccggcgttgtac 24745 Query: 346 tggtagtggagcaggccctgggggaacaccatgatgtcgcccttgtagagcgtcttggtg 405 |||||||| || ||||||||||||||||||||||||||||| ||| |||||| ||||| Sbjct: 24746 tggtagtgcaggaggccctgggggaacaccatgatgtcgccggcgtacagcgtcctggtg 24805 Query: 406 tacacggtgttggaggaggagctgatgaagcccgccaagatggtgccctcggttacgaag 465 || |||||||||||||||||| ||||||| || || || |||||||| ||| ||||| Sbjct: 24806 tagacggtgttggaggaggaggtgatgaacccggcggcgacggtgccctgggtgacgaac 24865 Query: 466 aggagctcagaggcggccgggtgggtgtgcatcggcacgacgccgcccacggcgatgtcg 525 |||||||| |||||||||||||||||||| | ||||||||||||||| ||||||||||| Sbjct: 24866 aggagctcggaggcggccgggtgggtgtggagcggcacgacgccgccgacggcgatgtcc 24925 Query: 526 agcctcgccgcagagatgccgagcccgttcacgccggggaactggccgacgaaggccggg 585 ||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 24926 agcctcgccgcggagataccgagcccgttcacgccggggaactggccgacgaaggccggc 24985 Query: 586 gttacggccgccttgatgaggttgcttggtgttgcccgcggcggcgaggccgtggtagta 645 || ||||| |||||||||||||||| ||||||||||||| || ||||||||||||||| Sbjct: 24986 gtcacggcggccttgatgaggttgc-tggtgttgcccgccgccgcgaggccgtggtaggc 25044 Query: 646 gaagtcccccgcgccgacgccggtcttgcacgg 678 |||||| || |||||||||| || ||||||||| Sbjct: 25045 gaagtcgccggcgccgacgctggccttgcacgg 25077 Score = 77.8 bits (39), Expect = 4e-11 Identities = 108/131 (82%) Strand = Plus / Plus Query: 244 ggcaggttgttggcgaagagcgcgtagtcagtgatctggaggcctgggttggggccgctg 303 ||||||||||||||||||||||||||||| |||||| ||||| ||||| | || |||| Sbjct: 19683 ggcaggttgttggcgaagagcgcgtagtcgaggatctgcaggccggggttcgagctgctg 19742 Query: 304 aacgcaacgagcgctaccgccgcggagctgccaccgttgtactggtagtggagcaggccc 363 |||| ||| ||| ||||||| | | ||| |||||||||| |||||||||||||| Sbjct: 19743 tacgccgcgaacgccaccgccgtcgtgtcgccggtgttgtactggaagtggagcaggccc 19802 Query: 364 tgggggaacac 374 || |||||||| Sbjct: 19803 tgcgggaacac 19813 Score = 65.9 bits (33), Expect = 2e-07 Identities = 45/49 (91%) Strand = Plus / Plus Query: 464 agaggagctcagaggcggccgggtgggtgtgcatcggcacgacgccgcc 512 |||||||||| ||| ||||||| |||||||||| ||||||||||||||| Sbjct: 19903 agaggagctcggagccggccggatgggtgtgcagcggcacgacgccgcc 19951
>dbj|AP004586.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0493A04 Length = 149367 Score = 573 bits (289), Expect = e-160 Identities = 458/513 (89%), Gaps = 1/513 (0%) Strand = Plus / Plus Query: 166 ccgctgccgccgagcacggacttgagcttcttcacctgcgcgtcgtccaagaaggtgacc 225 ||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 145993 ccgctaccgccgaggacggacttgagcttcttcacctgcgcgtcgtccaagaaggtgacc 146052 Query: 226 ttctcaaccacggcggatggcaggttgttggcgaagagcgcgtagtcagtgatctggagg 285 ||||| || | |||||| |||||||||||||||||||| |||||||| |||||||||||| Sbjct: 146053 ttctcgacgatggcggacggcaggttgttggcgaagagggcgtagtcggtgatctggagg 146112 Query: 286 cctgggttggggccgctgaacgcaacgagcgctaccgccgcggagctgccaccgttgtac 345 || ||||||||||||||||| || |||||||| |||||||| || ||| |||||||| Sbjct: 146113 ccggggttggggccgctgaaggcgacgagcgccaccgccgccgactggccggcgttgtac 146172 Query: 346 tggtagtggagcaggccctgggggaacaccatgatgtcgcccttgtagagcgtcttggtg 405 |||||||| || ||||||||||||||||||||||||||||| ||| |||||| ||||| Sbjct: 146173 tggtagtgcaggaggccctgggggaacaccatgatgtcgccggcgtacagcgtcctggtg 146232 Query: 406 tacacggtgttggaggaggagctgatgaagcccgccaagatggtgccctcggttacgaag 465 || |||||||||||||||||| ||||||| || || || |||||||| ||| ||||| Sbjct: 146233 tagacggtgttggaggaggaggtgatgaacccggcggcgacggtgccctgggtgacgaac 146292 Query: 466 aggagctcagaggcggccgggtgggtgtgcatcggcacgacgccgcccacggcgatgtcg 525 |||||||| |||||||||||||||||||| | ||||||||||||||| ||||||||||| Sbjct: 146293 aggagctcggaggcggccgggtgggtgtggagcggcacgacgccgccgacggcgatgtcc 146352 Query: 526 agcctcgccgcagagatgccgagcccgttcacgccggggaactggccgacgaaggccggg 585 ||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 146353 agcctcgccgcggagataccgagcccgttcacgccggggaactggccgacgaaggccggc 146412 Query: 586 gttacggccgccttgatgaggttgcttggtgttgcccgcggcggcgaggccgtggtagta 645 || ||||| |||||||||||||||| ||||||||||||| || ||||||||||||||| Sbjct: 146413 gtcacggcggccttgatgaggttgc-tggtgttgcccgccgccgcgaggccgtggtaggc 146471 Query: 646 gaagtcccccgcgccgacgccggtcttgcacgg 678 |||||| || |||||||||| || ||||||||| Sbjct: 146472 gaagtcgccggcgccgacgctggccttgcacgg 146504 Score = 77.8 bits (39), Expect = 4e-11 Identities = 108/131 (82%) Strand = Plus / Plus Query: 244 ggcaggttgttggcgaagagcgcgtagtcagtgatctggaggcctgggttggggccgctg 303 ||||||||||||||||||||||||||||| |||||| ||||| ||||| | || |||| Sbjct: 141110 ggcaggttgttggcgaagagcgcgtagtcgaggatctgcaggccggggttcgagctgctg 141169 Query: 304 aacgcaacgagcgctaccgccgcggagctgccaccgttgtactggtagtggagcaggccc 363 |||| ||| ||| ||||||| | | ||| |||||||||| |||||||||||||| Sbjct: 141170 tacgccgcgaacgccaccgccgtcgtgtcgccggtgttgtactggaagtggagcaggccc 141229 Query: 364 tgggggaacac 374 || |||||||| Sbjct: 141230 tgcgggaacac 141240 Score = 65.9 bits (33), Expect = 2e-07 Identities = 45/49 (91%) Strand = Plus / Plus Query: 464 agaggagctcagaggcggccgggtgggtgtgcatcggcacgacgccgcc 512 |||||||||| ||| ||||||| |||||||||| ||||||||||||||| Sbjct: 141330 agaggagctcggagccggccggatgggtgtgcagcggcacgacgccgcc 141378
>dbj|AK104729.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-038-C02, full insert sequence Length = 938 Score = 573 bits (289), Expect = e-160 Identities = 458/513 (89%), Gaps = 1/513 (0%) Strand = Plus / Minus Query: 166 ccgctgccgccgagcacggacttgagcttcttcacctgcgcgtcgtccaagaaggtgacc 225 ||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 739 ccgctaccgccgaggacggacttgagcttcttcacctgcgcgtcgtccaagaaggtgacc 680 Query: 226 ttctcaaccacggcggatggcaggttgttggcgaagagcgcgtagtcagtgatctggagg 285 ||||| || | |||||| |||||||||||||||||||| |||||||| |||||||||||| Sbjct: 679 ttctcgacgatggcggacggcaggttgttggcgaagagggcgtagtcggtgatctggagg 620 Query: 286 cctgggttggggccgctgaacgcaacgagcgctaccgccgcggagctgccaccgttgtac 345 || ||||||||||||||||| || |||||||| |||||||| || ||| |||||||| Sbjct: 619 ccggggttggggccgctgaaggcgacgagcgccaccgccgccgactggccggcgttgtac 560 Query: 346 tggtagtggagcaggccctgggggaacaccatgatgtcgcccttgtagagcgtcttggtg 405 |||||||| || ||||||||||||||||||||||||||||| ||| |||||| ||||| Sbjct: 559 tggtagtgcaggaggccctgggggaacaccatgatgtcgccggcgtacagcgtcctggtg 500 Query: 406 tacacggtgttggaggaggagctgatgaagcccgccaagatggtgccctcggttacgaag 465 || |||||||||||||||||| ||||||| || || || |||||||| ||| ||||| Sbjct: 499 tagacggtgttggaggaggaggtgatgaacccggcggcgacggtgccctgggtgacgaac 440 Query: 466 aggagctcagaggcggccgggtgggtgtgcatcggcacgacgccgcccacggcgatgtcg 525 |||||||| |||||||||||||||||||| | ||||||||||||||| ||||||||||| Sbjct: 439 aggagctcggaggcggccgggtgggtgtggagcggcacgacgccgccgacggcgatgtcc 380 Query: 526 agcctcgccgcagagatgccgagcccgttcacgccggggaactggccgacgaaggccggg 585 ||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 379 agcctcgccgcggagataccgagcccgttcacgccggggaactggccgacgaaggccggc 320 Query: 586 gttacggccgccttgatgaggttgcttggtgttgcccgcggcggcgaggccgtggtagta 645 || ||||| |||||||||||||||| ||||||||||||| || ||||||||||||||| Sbjct: 319 gtcacggcggccttgatgaggttgc-tggtgttgcccgccgccgcgaggccgtggtaggc 261 Query: 646 gaagtcccccgcgccgacgccggtcttgcacgg 678 |||||| || |||||||||| || ||||||||| Sbjct: 260 gaagtcgccggcgccgacgctggccttgcacgg 228
>dbj|AK065284.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002M08, full insert sequence Length = 994 Score = 573 bits (289), Expect = e-160 Identities = 458/513 (89%), Gaps = 1/513 (0%) Strand = Plus / Minus Query: 166 ccgctgccgccgagcacggacttgagcttcttcacctgcgcgtcgtccaagaaggtgacc 225 ||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 728 ccgctaccgccgaggacggacttgagcttcttcacctgcgcgtcgtccaagaaggtgacc 669 Query: 226 ttctcaaccacggcggatggcaggttgttggcgaagagcgcgtagtcagtgatctggagg 285 ||||| || | |||||| |||||||||||||||||||| |||||||| |||||||||||| Sbjct: 668 ttctcgacgatggcggacggcaggttgttggcgaagagggcgtagtcggtgatctggagg 609 Query: 286 cctgggttggggccgctgaacgcaacgagcgctaccgccgcggagctgccaccgttgtac 345 || ||||||||||||||||| || |||||||| |||||||| || ||| |||||||| Sbjct: 608 ccggggttggggccgctgaaggcgacgagcgccaccgccgccgactggccggcgttgtac 549 Query: 346 tggtagtggagcaggccctgggggaacaccatgatgtcgcccttgtagagcgtcttggtg 405 |||||||| || ||||||||||||||||||||||||||||| ||| |||||| ||||| Sbjct: 548 tggtagtgcaggaggccctgggggaacaccatgatgtcgccggcgtacagcgtcctggtg 489 Query: 406 tacacggtgttggaggaggagctgatgaagcccgccaagatggtgccctcggttacgaag 465 || |||||||||||||||||| ||||||| || || || |||||||| ||| ||||| Sbjct: 488 tagacggtgttggaggaggaggtgatgaacccggcggcgacggtgccctgggtgacgaac 429 Query: 466 aggagctcagaggcggccgggtgggtgtgcatcggcacgacgccgcccacggcgatgtcg 525 |||||||| |||||||||||||||||||| | ||||||||||||||| ||||||||||| Sbjct: 428 aggagctcggaggcggccgggtgggtgtggagcggcacgacgccgccgacggcgatgtcc 369 Query: 526 agcctcgccgcagagatgccgagcccgttcacgccggggaactggccgacgaaggccggg 585 ||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 368 agcctcgccgcggagataccgagcccgttcacgccggggaactggccgacgaaggccggc 309 Query: 586 gttacggccgccttgatgaggttgcttggtgttgcccgcggcggcgaggccgtggtagta 645 || ||||| |||||||||||||||| ||||||||||||| || ||||||||||||||| Sbjct: 308 gtcacggcggccttgatgaggttgc-tggtgttgcccgccgccgcgaggccgtggtaggc 250 Query: 646 gaagtcccccgcgccgacgccggtcttgcacgg 678 |||||| || |||||||||| || ||||||||| Sbjct: 249 gaagtcgccggcgccgacgctggccttgcacgg 217
>dbj|AB015593.1| Oryza sativa OsGLP1 gene for germin-like protein 1, complete cds Length = 642 Score = 573 bits (289), Expect = e-160 Identities = 458/513 (89%), Gaps = 1/513 (0%) Strand = Plus / Minus Query: 166 ccgctgccgccgagcacggacttgagcttcttcacctgcgcgtcgtccaagaaggtgacc 225 ||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 638 ccgctaccgccgaggacggacttgagcttcttcacctgcgcgtcgtccaagaaggtgacc 579 Query: 226 ttctcaaccacggcggatggcaggttgttggcgaagagcgcgtagtcagtgatctggagg 285 ||||| || | |||||| |||||||||||||||||||| |||||||| |||||||||||| Sbjct: 578 ttctcgacgatggcggacggcaggttgttggcgaagagggcgtagtcggtgatctggagg 519 Query: 286 cctgggttggggccgctgaacgcaacgagcgctaccgccgcggagctgccaccgttgtac 345 || ||||||||||||||||| || |||||||| |||||||| || ||| |||||||| Sbjct: 518 ccggggttggggccgctgaaggcgacgagcgccaccgccgccgactggccggcgttgtac 459 Query: 346 tggtagtggagcaggccctgggggaacaccatgatgtcgcccttgtagagcgtcttggtg 405 |||||||| || ||||||||||||||||||||||||||||| ||| |||||| ||||| Sbjct: 458 tggtagtgcaggaggccctgggggaacaccatgatgtcgccggcgtacagcgtcctggtg 399 Query: 406 tacacggtgttggaggaggagctgatgaagcccgccaagatggtgccctcggttacgaag 465 || |||||||||||||||||| ||||||| || || || |||||||| ||| ||||| Sbjct: 398 tagacggtgttggaggaggaggtgatgaacccggcggcgacggtgccctgggtgacgaac 339 Query: 466 aggagctcagaggcggccgggtgggtgtgcatcggcacgacgccgcccacggcgatgtcg 525 |||||||| |||||||||||||||||||| | ||||||||||||||| ||||||||||| Sbjct: 338 aggagctcggaggcggccgggtgggtgtggagcggcacgacgccgccgacggcgatgtcc 279 Query: 526 agcctcgccgcagagatgccgagcccgttcacgccggggaactggccgacgaaggccggg 585 ||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 278 agcctcgccgcggagataccgagcccgttcacgccggggaactggccgacgaaggccggc 219 Query: 586 gttacggccgccttgatgaggttgcttggtgttgcccgcggcggcgaggccgtggtagta 645 || ||||| |||||||||||||||| ||||||||||||| || ||||||||||||||| Sbjct: 218 gtcacggcggccttgatgaggttgc-tggtgttgcccgccgccgcgaggccgtggtaggc 160 Query: 646 gaagtcccccgcgccgacgccggtcttgcacgg 678 |||||| || |||||||||| || ||||||||| Sbjct: 159 gaagtcgccggcgccgacgctggccttgcacgg 127
>gb|AF051156.1|AF051156 Oryza sativa germin-like protein (GLP110) mRNA, complete cds Length = 1004 Score = 557 bits (281), Expect = e-155 Identities = 456/513 (88%), Gaps = 1/513 (0%) Strand = Plus / Minus Query: 166 ccgctgccgccgagcacggacttgagcttcttcacctgcgcgtcgtccaagaaggtgacc 225 ||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 720 ccgctaccgccgaggacggacttgagcttcttcacctgcgcgtcgtccaagaaggtgacc 661 Query: 226 ttctcaaccacggcggatggcaggttgttggcgaagagcgcgtagtcagtgatctggagg 285 ||||| || | |||||| |||||||||||||||||||| |||||||| |||||||||||| Sbjct: 660 ttctcgacgatggcggacggcaggttgttggcgaagagggcgtagtcggtgatctggagg 601 Query: 286 cctgggttggggccgctgaacgcaacgagcgctaccgccgcggagctgccaccgttgtac 345 || ||||||||||||||||| || |||||||| |||||||| || ||| |||||||| Sbjct: 600 ccggggttggggccgctgaaggcgacgagcgccaccgccgccgactggccggcgttgtac 541 Query: 346 tggtagtggagcaggccctgggggaacaccatgatgtcgcccttgtagagcgtcttggtg 405 |||||||| || ||||||||||||||||||||||||||||| ||| |||||| ||||| Sbjct: 540 tggtagtgcaggaggccctgggggaacaccatgatgtcgccggcgtacagcgtcctggtg 481 Query: 406 tacacggtgttggaggaggagctgatgaagcccgccaagatggtgccctcggttacgaag 465 || |||||||||||||||||| ||||||| || || || |||||| | ||| ||||| Sbjct: 480 tagacggtgttggaggaggaggtgatgaacccggcggcgacggtgccttgggtgacgaac 421 Query: 466 aggagctcagaggcggccgggtgggtgtgcatcggcacgacgccgcccacggcgatgtcg 525 |||||||| |||||||||||||||||||| | ||||||||||||||| ||||||||||| Sbjct: 420 aggagctcggaggcggccgggtgggtgtggagcggcacgacgccgccgacggcgatgtcc 361 Query: 526 agcctcgccgcagagatgccgagcccgttcacgccggggaactggccgacgaaggccggg 585 ||| ||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 360 agcttcgccgcggagataccgagcccgttcacgccggggaactggccgacgaaggccggc 301 Query: 586 gttacggccgccttgatgaggttgcttggtgttgcccgcggcggcgaggccgtggtagta 645 || ||||| |||||||||||||||| ||||||||||||| || ||||||||||||||| Sbjct: 300 gtcacggcggccttgatgaggttgc-tggtgttgcccgccgccgcgaggccgtggtaggc 242 Query: 646 gaagtcccccgcgccgacgccggtcttgcacgg 678 |||||| || |||||||||| || ||||||||| Sbjct: 241 gaagtcgccggcgccgacgctggccttgcacgg 209
>dbj|AB010876.1| Oryza sativa OsGLP1 mRNA for germin-like protein 1, complete cds Length = 994 Score = 525 bits (265), Expect = e-146 Identities = 452/513 (88%), Gaps = 1/513 (0%) Strand = Plus / Minus Query: 166 ccgctgccgccgagcacggacttgagcttcttcacctgcgcgtcgtccaagaaggtgacc 225 ||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 740 ccgctaccgccgaggacggacttgagcttcttcacctgcgcgtcgtccaagaaggtgacc 681 Query: 226 ttctcaaccacggcggatggcaggttgttggcgaagagcgcgtagtcagtgatctggagg 285 ||||| || | |||||| |||||||||||||||||||| |||||||| | ||||| || Sbjct: 680 ttctcgacgatggcggacggcaggttgttggcgaagagggcgtagtcgttaatctgaagc 621 Query: 286 cctgggttggggccgctgaacgcaacgagcgctaccgccgcggagctgccaccgttgtac 345 || ||||||||||||||||| | |||||||| |||||||| || ||| |||||||| Sbjct: 620 ccggggttggggccgctgaagccgacgagcgccaccgccgccgactggccggcgttgtac 561 Query: 346 tggtagtggagcaggccctgggggaacaccatgatgtcgcccttgtagagcgtcttggtg 405 |||||||| || ||||||||||||||||||||||||||||| ||| |||||| ||||| Sbjct: 560 tggtagtgcaggaggccctgggggaacaccatgatgtcgccggcgtacagcgtcctggtg 501 Query: 406 tacacggtgttggaggaggagctgatgaagcccgccaagatggtgccctcggttacgaag 465 || |||||||||||||||||| ||||||| || || || |||||||| ||| ||||| Sbjct: 500 tagacggtgttggaggaggaggtgatgaacccggcggcgacggtgccctgggtgacgaac 441 Query: 466 aggagctcagaggcggccgggtgggtgtgcatcggcacgacgccgcccacggcgatgtcg 525 |||||||| |||||||||||||||||||| | |||||||||||| || ||||||||||| Sbjct: 440 aggagctcggaggcggccgggtgggtgtggagcggcacgacgcccccgacggcgatgtcc 381 Query: 526 agcctcgccgcagagatgccgagcccgttcacgccggggaactggccgacgaaggccggg 585 ||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 380 agcctcgccgcggagataccgagcccgttcacgccggggaactggccgacgaaggccggc 321 Query: 586 gttacggccgccttgatgaggttgcttggtgttgcccgcggcggcgaggccgtggtagta 645 || ||||| |||||||||||||||| ||||||||||||| || ||||||||||||||| Sbjct: 320 gtcacggcggccttgatgaggttgc-tggtgttgcccgccgccgcgaggccgtggtaggc 262 Query: 646 gaagtcccccgcgccgacgccggtcttgcacgg 678 |||||| || |||||||||| || ||||||||| Sbjct: 261 gaagtcgccggcgccgacgctggccttgcacgg 229
>gb|AY394010.1| Zea mays germin-like protein (glp1) gene, promoter region and complete cds Length = 2490 Score = 444 bits (224), Expect = e-121 Identities = 386/440 (87%) Strand = Plus / Minus Query: 166 ccgctgccgccgagcacggacttgagcttcttcacctgcgcgtcgtccaagaaggtgacc 225 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 2089 ccgctgccgccgagcacactcttgagcttcttcacctgcgcgtcgtccaagaaggtgacc 2030 Query: 226 ttctcaaccacggcggatggcaggttgttggcgaagagcgcgtagtcagtgatctggagg 285 ||||| || |||||||| || ||||||||||| |||||||| |||| |||||||| ||| Sbjct: 2029 ttctccacgacggcggacgggaggttgttggcaaagagcgcaaagtcggtgatctgcagg 1970 Query: 286 cctgggttggggccgctgaacgcaacgagcgctaccgccgcggagctgccaccgttgtac 345 || |||||||||| |||||| || ||||| | || || ||| | |||| |||||||| Sbjct: 1969 ccggggttggggctgctgaaggcgacgaggcccacggcagcgccggtgccggcgttgtac 1910 Query: 346 tggtagtggagcaggccctgggggaacaccatgatgtcgcccttgtagagcgtcttggtg 405 ||||||||||||||||||||||||||||||||||||||||| ||| || ||||||||| Sbjct: 1909 tggtagtggagcaggccctgggggaacaccatgatgtcgccggcgtacagtgtcttggtg 1850 Query: 406 tacacggtgttggaggaggagctgatgaagcccgccaagatggtgccctcggttacgaag 465 || |||||||||||| ||||||||||||||| || || |||||||| ||| |||||| Sbjct: 1849 tagacggtgttggagccggagctgatgaagccggcggcgacggtgccctgggtcacgaag 1790 Query: 466 aggagctcagaggcggccgggtgggtgtgcatcggcacgacgccgcccacggcgatgtcg 525 |||||||| ||| | |||||||||||||||| |||||||||||||||||| |||||||| Sbjct: 1789 aggagctctgagcccgccgggtgggtgtgcagcggcacgacgccgcccacctcgatgtcg 1730 Query: 526 agcctcgccgcagagatgccgagcccgttcacgccggggaactggccgacgaaggccggg 585 ||||| |||||||||||||| |||||||| ||||| ||||||||||| |||||||||||| Sbjct: 1729 agcctggccgcagagatgccaagcccgttgacgcccgggaactggcccacgaaggccggg 1670 Query: 586 gttacggccgccttgatgag 605 || ||||| ||||||||||| Sbjct: 1669 gtcacggcggccttgatgag 1650
>gb|AY112552.1| Zea mays CL11523_1 mRNA sequence Length = 544 Score = 143 bits (72), Expect = 9e-31 Identities = 151/179 (84%) Strand = Plus / Plus Query: 203 gcgcgtcgtccaagaaggtgaccttctcaaccacggcggatggcaggttgttggcgaaga 262 |||||||||||||||||||||||||||| || |||||||| || ||||||||||| |||| Sbjct: 366 gcgcgtcgtccaagaaggtgaccttctccacgacggcggacgggaggttgttggcaaaga 425 Query: 263 gcgcgtagtcagtgatctggaggcctgggttggggccgctgaacgcaacgagcgctaccg 322 |||| |||| |||||||| ||||| |||||||||| |||||| || ||||| | || | Sbjct: 426 gcgcaaagtcggtgatctgcaggccggggttggggctgctgaaggcgacgaggcccacgg 485 Query: 323 ccgcggagctgccaccgttgtactggtagtggagcaggccctgggggaacaccatgatg 381 | ||| | |||| ||||||||||||||||||||||||||| |||||||||||| Sbjct: 486 cagcgccggtgccggcgttgtactggtagtggagcaggccctnnnnnaacaccatgatg 544
>ref|XM_482785.1| Oryza sativa (japonica cultivar-group), mRNA Length = 660 Score = 77.8 bits (39), Expect = 4e-11 Identities = 108/131 (82%) Strand = Plus / Minus Query: 244 ggcaggttgttggcgaagagcgcgtagtcagtgatctggaggcctgggttggggccgctg 303 ||||||||||||||||||||||||||||| |||||| ||||| ||||| | || |||| Sbjct: 578 ggcaggttgttggcgaagagcgcgtagtcgaggatctgcaggccggggttcgagctgctg 519 Query: 304 aacgcaacgagcgctaccgccgcggagctgccaccgttgtactggtagtggagcaggccc 363 |||| ||| ||| ||||||| | | ||| |||||||||| |||||||||||||| Sbjct: 518 tacgccgcgaacgccaccgccgtcgtgtcgccggtgttgtactggaagtggagcaggccc 459 Query: 364 tgggggaacac 374 || |||||||| Sbjct: 458 tgcgggaacac 448 Score = 65.9 bits (33), Expect = 2e-07 Identities = 45/49 (91%) Strand = Plus / Minus Query: 464 agaggagctcagaggcggccgggtgggtgtgcatcggcacgacgccgcc 512 |||||||||| ||| ||||||| |||||||||| ||||||||||||||| Sbjct: 358 agaggagctcggagccggccggatgggtgtgcagcggcacgacgccgcc 310
>ref|XM_471594.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1299 Score = 56.0 bits (28), Expect = 2e-04 Identities = 58/68 (85%) Strand = Plus / Minus Query: 367 gggaacaccatgatgtcgcccttgtagagcgtcttggtgtacacggtgttggaggaggag 426 ||||||||||||| |||||||||| |||||| |||||||||| ||||||| | ||| Sbjct: 440 gggaacaccatgaggtcgcccttgcggagcgtgctggtgtacaccttgttggatgtagag 381 Query: 427 ctgatgaa 434 |||||||| Sbjct: 380 ctgatgaa 373 Score = 46.1 bits (23), Expect = 0.15 Identities = 32/35 (91%) Strand = Plus / Minus Query: 247 aggttgttggcgaagagcgcgtagtcagtgatctg 281 ||||||||||||||||||||| |||| ||||||| Sbjct: 581 aggttgttggcgaagagcgcgaagtccatgatctg 547
>emb|AL731615.4|OSJN00256 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0065J03, complete sequence Length = 144146 Score = 56.0 bits (28), Expect = 2e-04 Identities = 58/68 (85%) Strand = Plus / Minus Query: 367 gggaacaccatgatgtcgcccttgtagagcgtcttggtgtacacggtgttggaggaggag 426 ||||||||||||| |||||||||| |||||| |||||||||| ||||||| | ||| Sbjct: 38043 gggaacaccatgaggtcgcccttgcggagcgtgctggtgtacaccttgttggatgtagag 37984 Query: 427 ctgatgaa 434 |||||||| Sbjct: 37983 ctgatgaa 37976 Score = 46.1 bits (23), Expect = 0.15 Identities = 32/35 (91%) Strand = Plus / Minus Query: 247 aggttgttggcgaagagcgcgtagtcagtgatctg 281 ||||||||||||||||||||| |||| ||||||| Sbjct: 38184 aggttgttggcgaagagcgcgaagtccatgatctg 38150
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 56.0 bits (28), Expect = 2e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 367 gggaacaccatgatgtcgcccttgtagagcgtcttggtgtacacggtgttggaggaggag 426 ||||||||||||| |||||||||| |||||| |||||||||| ||||||| | ||| Sbjct: 12556182 gggaacaccatgaggtcgcccttgcggagcgtgctggtgtacaccttgttggatgtagag 12556241 Query: 427 ctgatgaa 434 |||||||| Sbjct: 12556242 ctgatgaa 12556249 Score = 46.1 bits (23), Expect = 0.15 Identities = 32/35 (91%) Strand = Plus / Plus Query: 247 aggttgttggcgaagagcgcgtagtcagtgatctg 281 ||||||||||||||||||||| |||| ||||||| Sbjct: 12556041 aggttgttggcgaagagcgcgaagtccatgatctg 12556075
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 615 tgttgcccgcggcggcgaggccg 637 ||||||||||||||||||||||| Sbjct: 2543208 tgttgcccgcggcggcgaggccg 2543186
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 615 tgttgcccgcggcggcgaggccg 637 ||||||||||||||||||||||| Sbjct: 3495759 tgttgcccgcggcggcgaggccg 3495737
>gb|AC018509.6| Homo sapiens chromosome 10 clone RP11-307B23, complete sequence Length = 162877 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Plus Query: 29 caaatgaaattgatatgaaaaat 51 ||||||||||||||||||||||| Sbjct: 144794 caaatgaaattgatatgaaaaat 144816
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Plus Query: 615 tgttgcccgcggcggcgaggccg 637 ||||||||||||||||||||||| Sbjct: 1370677 tgttgcccgcggcggcgaggccg 1370699 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 192 cttcttcacctgcgcgtcgt 211 |||||||||||||||||||| Sbjct: 2421518 cttcttcacctgcgcgtcgt 2421499
>gb|AC137000.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0035I01, complete sequence Length = 147813 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Plus Query: 34 gaaattgatatgaaaaattaaa 55 |||||||||||||||||||||| Sbjct: 3137 gaaattgatatgaaaaattaaa 3158
>gb|AC148171.16| Medicago truncatula clone mth2-30a2, complete sequence Length = 158384 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Plus Query: 34 gaaattgatatgaaaaattaaa 55 |||||||||||||||||||||| Sbjct: 58531 gaaattgatatgaaaaattaaa 58552
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Plus Query: 34 gaaattgatatgaaaaattaaa 55 |||||||||||||||||||||| Sbjct: 29518635 gaaattgatatgaaaaattaaa 29518656
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 44.1 bits (22), Expect = 0.59 Identities = 25/26 (96%) Strand = Plus / Plus Query: 167 cgctgccgccgagcacggacttgagc 192 |||||||||||||||||| ||||||| Sbjct: 7136995 cgctgccgccgagcacggccttgagc 7137020
>gb|AC144455.5| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0086G17, complete sequence Length = 134631 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Plus Query: 34 gaaattgatatgaaaaattaaa 55 |||||||||||||||||||||| Sbjct: 102905 gaaattgatatgaaaaattaaa 102926
>gb|AY299121.1| Xanthomonas oryzae bacteriophage Xp10 genomic DNA, complete genome Length = 44373 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 190 agcttcttcacctgcgcgtcg 210 ||||||||||||||||||||| Sbjct: 10658 agcttcttcacctgcgcgtcg 10638
>emb|AL139331.19| Human DNA sequence from clone RP11-328M4 on chromosome 6 Contains a novel gene, the FOXP4 gene for forkhead box P4 and five CpG islands, complete sequence Length = 180547 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 462 gaagaggagctcagaggcggc 482 ||||||||||||||||||||| Sbjct: 166396 gaagaggagctcagaggcggc 166376
>emb|BX294147.1| Pirellula sp. strain 1 complete genome; segment 15/24 Length = 314450 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 371 acaccatgatgtcgcccttgtagag 395 |||||||||||| |||||||||||| Sbjct: 172639 acaccatgatgttgcccttgtagag 172615
>emb|AL939114.1|SCO939114 Streptomyces coelicolor A3(2) complete genome; segment 11/29 Length = 313800 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 189 gagcttcttcacctgcgcgtcgtcc 213 |||||||||||||| |||||||||| Sbjct: 305483 gagcttcttcaccttcgcgtcgtcc 305507
>gb|BC101772.1| Homo sapiens stoned B/TFIIA-alpha/beta-like factor, mRNA (cDNA clone MGC:126821 IMAGE:8069278), complete cds Length = 3675 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 416 tggaggaggagctgatgaag 435 |||||||||||||||||||| Sbjct: 1205 tggaggaggagctgatgaag 1224
>gb|BC101774.1| Homo sapiens stoned B/TFIIA-alpha/beta-like factor, mRNA (cDNA clone MGC:126823 IMAGE:8069280), complete cds Length = 3675 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 416 tggaggaggagctgatgaag 435 |||||||||||||||||||| Sbjct: 1205 tggaggaggagctgatgaag 1224
>ref|NM_183572.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 951 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 410 cggtgttggaggaggagctg 429 |||||||||||||||||||| Sbjct: 787 cggtgttggaggaggagctg 768
>gb|AC122011.3| Mus musculus chromosome 10 clone RP24-352E6, complete sequence Length = 181468 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 34 gaaattgatatgaaaaatta 53 |||||||||||||||||||| Sbjct: 13285 gaaattgatatgaaaaatta 13266
>gb|CP000110.1| Synechococcus sp. CC9605, complete genome Length = 2510659 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 351 gtggagcaggccctggggga 370 |||||||||||||||||||| Sbjct: 1620051 gtggagcaggccctggggga 1620032
>gb|CP000097.1| Synechococcus sp. CC9902, complete genome Length = 2234828 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 409 acggtgttggaggaggagct 428 |||||||||||||||||||| Sbjct: 2064395 acggtgttggaggaggagct 2064376
>ref|XM_470903.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1623 Score = 40.1 bits (20), Expect = 9.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 611 ttggtgttgcccgcggcggcgaggccgt 638 ||||||||||| ||||||||||||||| Sbjct: 440 ttggtgttgccgtcggcggcgaggccgt 413
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence Length = 3694126 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 192 cttcttcacctgcgcgtcgt 211 |||||||||||||||||||| Sbjct: 2254715 cttcttcacctgcgcgtcgt 2254734
>ref|XM_515467.1| PREDICTED: Pan troglodytes LOC459223 (LOC459223), mRNA Length = 3820 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 416 tggaggaggagctgatgaag 435 |||||||||||||||||||| Sbjct: 1248 tggaggaggagctgatgaag 1267
>ref|NM_172311.1| Homo sapiens stoned B/TFIIA-alpha/beta-like factor (SALF), mRNA Length = 3824 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 416 tggaggaggagctgatgaag 435 |||||||||||||||||||| Sbjct: 1292 tggaggaggagctgatgaag 1311
>gb|AC146316.3| Microcebus murinus clone CH257-437M14, complete sequence Length = 274705 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 38 ttgatatgaaaaattaaaca 57 |||||||||||||||||||| Sbjct: 59774 ttgatatgaaaaattaaaca 59793
>gb|AC119899.8| Mus musculus chromosome 5, clone RP24-235E5, complete sequence Length = 210751 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 26 catcaaatgaaattgatatgaaaa 49 |||||| ||||||||||||||||| Sbjct: 57747 catcaattgaaattgatatgaaaa 57770
>gb|AY441676.1| Galago senegalensis SINE element Mad3 Length = 528 Score = 40.1 bits (20), Expect = 9.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 379 atgtcgcccttgtagagcgtcttggtgt 406 ||||||||||||||||||| | |||||| Sbjct: 331 atgtcgcccttgtagagcgccctggtgt 304
>gb|AF030001.1|MMMHC29N7 Mus musculus major histocompatibility locus class III region:butyrophilin-like protein gene, partial cds; Notch4, PBX2, RAGE, lysophatidic acid acyl transferase-alpha, palmitoyl-protein thioesterase 2 (PPT2), CREB-RP, and tenascin X (TNX) genes, complete cds; and CYP21OHB pseudogene, complete sequence Length = 201964 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 278 tctggaggcctgggttgggg 297 |||||||||||||||||||| Sbjct: 197488 tctggaggcctgggttgggg 197507
>gb|AF049850.1|MMHC438N12 Mus musculus major histocompatibility locus class III region: complement C4 (C4) and cytochrome P450 hydroxylase A (CYP21OH-A) genes, complete cds; slp pseudogene, complete sequence; NG6, SKI, and complement factor B (Bf) genes, complete cds; and complement factor C2 (C2) gene, partial cds Length = 149886 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 278 tctggaggcctgggttgggg 297 |||||||||||||||||||| Sbjct: 77548 tctggaggcctgggttgggg 77567
>ref|XM_598627.2| PREDICTED: Bos taurus similar to CG6454-PB, isoform B (LOC520387), mRNA Length = 3625 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 45 gaaaaattaaacacaacttgaaac 68 |||||||||||||||| ||||||| Sbjct: 3157 gaaaaattaaacacaaattgaaac 3134
>gb|AC087514.2| Felis catus clone RP86-439N5, complete sequence Length = 151974 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 23 aatcatcaaatgaaattgat 42 |||||||||||||||||||| Sbjct: 60358 aatcatcaaatgaaattgat 60377
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 9.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 611 ttggtgttgcccgcggcggcgaggccgt 638 ||||||||||| ||||||||||||||| Sbjct: 16272166 ttggtgttgccgtcggcggcgaggccgt 16272139
>ref|XR_002034.1| PREDICTED: Mus musculus similar to Cytochrome P450 XXI (Steroid 21-hydroxylase) (21-OHase) (P450-C21) (P-450c21) (LOC632302), mRNA Length = 1732 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 278 tctggaggcctgggttgggg 297 |||||||||||||||||||| Sbjct: 917 tctggaggcctgggttgggg 898
>gb|AC130969.4| Rattus norvegicus 2 BAC CH230-105B13 (Children's Hospital Oakland Research Institute) complete sequence Length = 238254 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 407 acacggtgttggaggaggagctga 430 |||||||| ||||||||||||||| Sbjct: 172507 acacggtgctggaggaggagctga 172484
>gb|CP000353.1| Ralstonia metallidurans CH34 megaplasmid, complete sequence Length = 2580084 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 165 gccgctgccgccgagcacgg 184 |||||||||||||||||||| Sbjct: 2457731 gccgctgccgccgagcacgg 2457712
>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome Length = 3928089 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 417 ggaggaggagctgatgaagc 436 |||||||||||||||||||| Sbjct: 2528932 ggaggaggagctgatgaagc 2528913
>gb|AC141846.3| Homo sapiens chromosome 16 clone CTB-55P19, complete sequence Length = 261450 Score = 40.1 bits (20), Expect = 9.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 33 tgaaattgatatgaaaaattaaacacaa 60 ||||| |||| ||||||||||||||||| Sbjct: 232770 tgaaagtgatctgaaaaattaaacacaa 232743
>gb|AC115290.5| Mus musculus BAC clone RP23-65M10 from chromosome 10, complete sequence Length = 245623 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 44 tgaaaaattaaacacaacttgaaa 67 ||||||||||||||||| |||||| Sbjct: 225998 tgaaaaattaaacacaaattgaaa 226021
>gb|AC123855.4| Mus musculus BAC clone RP23-328J17 from chromosome 12, complete sequence Length = 205684 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 407 acacggtgttggaggaggagctga 430 ||||||||||||||||| |||||| Sbjct: 72880 acacggtgttggaggagtagctga 72857
>gb|AC124398.4| Mus musculus BAC clone RP24-349M24 from chromosome 12, complete sequence Length = 176369 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 407 acacggtgttggaggaggagctga 430 |||||||||||||| ||||||||| Sbjct: 172255 acacggtgttggagaaggagctga 172232
>gb|AC125092.4| Mus musculus BAC clone RP24-174F18 from chromosome 12, complete sequence Length = 178746 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 407 acacggtgttggaggaggagctga 430 |||||||||||||| ||||||||| Sbjct: 138391 acacggtgttggagaaggagctga 138414
>gb|AC100120.9| Mus musculus chromosome 10, clone RP23-40I1, complete sequence Length = 236895 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 34 gaaattgatatgaaaaatta 53 |||||||||||||||||||| Sbjct: 38058 gaaattgatatgaaaaatta 38077
>gb|AC114553.6| Mus musculus chromosome 5, clone RP23-408M16, complete sequence Length = 198281 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 31 aatgaaattgatatgaaaaa 50 |||||||||||||||||||| Sbjct: 195204 aatgaaattgatatgaaaaa 195185
>ref|NM_013137.1| Rattus norvegicus discoidin domain receptor family, member 1 (Ddr1), mRNA Length = 2733 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 411 ggtgttggaggaggagctga 430 |||||||||||||||||||| Sbjct: 1350 ggtgttggaggaggagctga 1369
>emb|BX322613.6| Human DNA sequence from clone RP11-745D9 on chromosome 10 Contains a CpG island, complete sequence Length = 191752 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 23 aatcatcaaatgaaattgat 42 |||||||||||||||||||| Sbjct: 40708 aatcatcaaatgaaattgat 40727
>emb|AL590225.4| Human DNA sequence from clone RP11-358H7 on chromosome 6 Contains part of the gene for a novel protein highly similar to FLJ30899, complete sequence Length = 65114 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 36 aattgatatgaaaaattaaa 55 |||||||||||||||||||| Sbjct: 1289 aattgatatgaaaaattaaa 1270
>gb|AC128353.6| Rattus norvegicus 13 BAC CH230-148A5 (Children's Hospital Oakland Research Institute) complete sequence Length = 207556 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 411 ggtgttggaggaggagctga 430 |||||||||||||||||||| Sbjct: 63469 ggtgttggaggaggagctga 63450
>emb|AL161440.9| Human DNA sequence from clone RP1-210G8 on chromosome 6, complete sequence Length = 81780 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 44 tgaaaaattaaacacaactt 63 |||||||||||||||||||| Sbjct: 54905 tgaaaaattaaacacaactt 54886
>emb|AL137793.16| Human DNA sequence from clone RP5-1065P14 on chromosome 1q41-42.2 Contains a novel pseudogene and a novel gene, complete sequence Length = 138419 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 467 ggagctcagaggcggccggg 486 |||||||||||||||||||| Sbjct: 114001 ggagctcagaggcggccggg 114020
>emb|AL031601.4|HSY237C10 Human DNA sequence from clone XX-Y237C10 on chromosome 10 Contains a poly(A) binding protein, cytoplasmic 1 (PABPC1) pseudogene, an Ig kappa chain precursor V region pseudogene, a pseudogene similar to part of kinase suppressor of ras (KSR) and four CpG islands, complete sequence Length = 197700 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 23 aatcatcaaatgaaattgat 42 |||||||||||||||||||| Sbjct: 760 aatcatcaaatgaaattgat 779
>gb|AC161185.5| Mus musculus chromosome 5, clone RP23-297D16, complete sequence Length = 206099 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 26 catcaaatgaaattgatatgaaaa 49 |||||| ||||||||||||||||| Sbjct: 2381 catcaattgaaattgatatgaaaa 2358
>gb|CP000089.1| Dechloromonas aromatica RCB, complete genome Length = 4501104 Score = 40.1 bits (20), Expect = 9.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 558 gccggggaactggccgacgaaggccggg 585 ||||||||| |||||| ||||||||||| Sbjct: 4472241 gccggggaaatggccggcgaaggccggg 4472214
>emb|BX883047.1| Rattus norvegicus chromosome 20, major histocompatibility complex, assembled from 40 BACs, strain Brown Norway (BN/ssNHsd), RT1n haplotype; segment 6/11 Length = 349571 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 411 ggtgttggaggaggagctga 430 |||||||||||||||||||| Sbjct: 265298 ggtgttggaggaggagctga 265279
>emb|BX571857.1| Staphylococcus aureus strain MSSA476, complete genome Length = 2799802 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 35 aaattgatatgaaaaattaa 54 |||||||||||||||||||| Sbjct: 281659 aaattgatatgaaaaattaa 281678
>emb|AL939106.1|SCO939106 Streptomyces coelicolor A3(2) complete genome; segment 3/29 Length = 314100 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 613 ggtgttgcccgcggcggcga 632 |||||||||||||||||||| Sbjct: 134911 ggtgttgcccgcggcggcga 134930
>gb|AC158753.8| Mus musculus chromosome 5, clone RP23-301E24, complete sequence Length = 190368 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 31 aatgaaattgatatgaaaaa 50 |||||||||||||||||||| Sbjct: 32566 aatgaaattgatatgaaaaa 32547
>emb|CR936807.1| Homo sapiens mRNA; cDNA DKFZp781K2462 (from clone DKFZp781K2462) Length = 5620 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 416 tggaggaggagctgatgaag 435 |||||||||||||||||||| Sbjct: 1373 tggaggaggagctgatgaag 1392
>emb|CR859409.1| Pongo pygmaeus mRNA; cDNA DKFZp469K176 (from clone DKFZp469K176) Length = 5526 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 416 tggaggaggagctgatgaag 435 |||||||||||||||||||| Sbjct: 1268 tggaggaggagctgatgaag 1287
>gb|AE005860.1| Caulobacter crescentus CB15 section 186 of 359 of the complete genome Length = 11137 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 509 cgcccacggcgatgtcgagc 528 |||||||||||||||||||| Sbjct: 2311 cgcccacggcgatgtcgagc 2330
>dbj|AB010266.1| Mus musculus Creb-rp, Tnx and Cyp21 genes for cAMP response element binding protein-related protein, tenascin-X and steroid 21-hydroxylase, partial cds and complete sequences Length = 67977 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 278 tctggaggcctgggttgggg 297 |||||||||||||||||||| Sbjct: 66569 tctggaggcctgggttgggg 66588
>dbj|AK146565.1| Mus musculus 17 days pregnant adult female amnion cDNA, RIKEN full-length enriched library, clone:I920026N02 product:cytochrome P450, family 21, subfamily a, polypeptide 1, full insert sequence Length = 2053 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 278 tctggaggcctgggttgggg 297 |||||||||||||||||||| Sbjct: 822 tctggaggcctgggttgggg 803
>ref|NM_006873.2| Homo sapiens stonin 1 (STON1), mRNA Length = 5822 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 416 tggaggaggagctgatgaag 435 |||||||||||||||||||| Sbjct: 1188 tggaggaggagctgatgaag 1207
>gb|AC068304.33| Homo sapiens 12 BAC RP11-515A6 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 155413 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 44 tgaaaaattaaacacaactt 63 |||||||||||||||||||| Sbjct: 18496 tgaaaaattaaacacaactt 18477
>gb|S77556.1| Ptk-3S=radiation-induced gene {alternatively spliced} [rats, neonatal Sprague-Dawley, brain primary astrocyte, mRNA Partial, 549 nt] Length = 549 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 411 ggtgttggaggaggagctga 430 |||||||||||||||||||| Sbjct: 150 ggtgttggaggaggagctga 169
>gb|S77585.1| Ptk-3L=radiation-induced gene [rats, neonatal Sprague-Dawley, brain primary astrocyte, mRNA Partial, 660 nt] Length = 660 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 411 ggtgttggaggaggagctga 430 |||||||||||||||||||| Sbjct: 150 ggtgttggaggaggagctga 169
>gb|AC092721.2| Homo sapiens chromosome 16 clone RP11-514P19, complete sequence Length = 201382 Score = 40.1 bits (20), Expect = 9.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 33 tgaaattgatatgaaaaattaaacacaa 60 ||||| |||| ||||||||||||||||| Sbjct: 194536 tgaaagtgatctgaaaaattaaacacaa 194509
>gb|AC154448.2| Mus musculus BAC clone RP23-185F24 from chromosome 16, complete sequence Length = 203269 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 411 ggtgttggaggaggagctga 430 |||||||||||||||||||| Sbjct: 181403 ggtgttggaggaggagctga 181384
>gb|AC118134.3| Oryza sativa chromosome 3 BAC OSJNBb0041J20 genomic sequence, complete sequence Length = 135585 Score = 40.1 bits (20), Expect = 9.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 611 ttggtgttgcccgcggcggcgaggccgt 638 ||||||||||| ||||||||||||||| Sbjct: 70182 ttggtgttgccgtcggcggcgaggccgt 70155
>gb|AF255310.1|AF255310 Homo sapiens stonin 1 mRNA, complete cds Length = 2509 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 416 tggaggaggagctgatgaag 435 |||||||||||||||||||| Sbjct: 1188 tggaggaggagctgatgaag 1207
>gb|AC140831.3| Homo sapiens chromosome 16 clone RP11-907K12, complete sequence Length = 96984 Score = 40.1 bits (20), Expect = 9.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 33 tgaaattgatatgaaaaattaaacacaa 60 ||||| |||| ||||||||||||||||| Sbjct: 28681 tgaaagtgatctgaaaaattaaacacaa 28708
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 9.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 611 ttggtgttgcccgcggcggcgaggccgt 638 ||||||||||| ||||||||||||||| Sbjct: 16265799 ttggtgttgccgtcggcggcgaggccgt 16265772
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 473 cagaggcggccgggtgggtg 492 |||||||||||||||||||| Sbjct: 21271706 cagaggcggccgggtgggtg 21271687 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 410 cggtgttggaggaggagctg 429 |||||||||||||||||||| Sbjct: 10365273 cggtgttggaggaggagctg 10365254
>gb|AY613781.1| Mus musculus strain C57BL/10J truncated steroid 21-hydroxylase (Cyp21a1) gene, complete cds Length = 3261 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 278 tctggaggcctgggttgggg 297 |||||||||||||||||||| Sbjct: 1511 tctggaggcctgggttgggg 1492
>gb|AY026319.1| Homo sapiens stoned B-like factor SBLF (SBLF) mRNA, complete cds Length = 2208 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 416 tggaggaggagctgatgaag 435 |||||||||||||||||||| Sbjct: 1178 tggaggaggagctgatgaag 1197
>gb|AC139676.3| Homo sapiens chromosome 8, clone RP13-648O9, complete sequence Length = 166153 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 280 tggaggcctgggttggggcc 299 |||||||||||||||||||| Sbjct: 10496 tggaggcctgggttggggcc 10515
>gb|AC154804.2| Mus musculus BAC clone RP24-506H9 from chromosome 16, complete sequence Length = 176299 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 411 ggtgttggaggaggagctga 430 |||||||||||||||||||| Sbjct: 153396 ggtgttggaggaggagctga 153415
>gb|AC073082.6| Homo sapiens BAC clone RP11-310N16 from 2, complete sequence Length = 177047 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 416 tggaggaggagctgatgaag 435 |||||||||||||||||||| Sbjct: 122687 tggaggaggagctgatgaag 122668
>gb|AY211023.1| Streptomyces violaceoruber strain SANK95570 plasmid pSV2, complete sequence Length = 96742 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 542 tgccgagcccgttcacgccg 561 |||||||||||||||||||| Sbjct: 70701 tgccgagcccgttcacgccg 70720
>gb|AC092374.4| Homo sapiens chromosome 16 clone RP11-637I8, complete sequence Length = 150962 Score = 40.1 bits (20), Expect = 9.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 33 tgaaattgatatgaaaaattaaacacaa 60 ||||| |||| ||||||||||||||||| Sbjct: 92388 tgaaagtgatctgaaaaattaaacacaa 92361
>dbj|AP002480.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0469E05 Length = 160769 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 410 cggtgttggaggaggagctg 429 |||||||||||||||||||| Sbjct: 10233 cggtgttggaggaggagctg 10214
>dbj|AP003924.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1064G04 Length = 186704 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 473 cagaggcggccgggtgggtg 492 |||||||||||||||||||| Sbjct: 169215 cagaggcggccgggtgggtg 169196
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 558 gccggggaactggccgacga 577 |||||||||||||||||||| Sbjct: 6983655 gccggggaactggccgacga 6983636
>gb|AC026131.4| Homo sapiens chromosome 11, clone RP11-458M15, complete sequence Length = 174688 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 23 aatcatcaaatgaaattgat 42 |||||||||||||||||||| Sbjct: 102969 aatcatcaaatgaaattgat 102950
>dbj|AP002070.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0511C01 Length = 170402 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 410 cggtgttggaggaggagctg 429 |||||||||||||||||||| Sbjct: 71993 cggtgttggaggaggagctg 71974
>dbj|BA000033.2| Staphylococcus aureus subsp. aureus MW2 DNA, complete genome, strain:MW2 Length = 2820462 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 35 aaattgatatgaaaaattaa 54 |||||||||||||||||||| Sbjct: 282959 aaattgatatgaaaaattaa 282978
>dbj|AB113399.1| Rattus norvegicus rCNR gene for cadherin-related neuronal receptor, exon cluster Length = 249555 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 411 ggtgttggaggaggagctga 430 |||||||||||||||||||| Sbjct: 246730 ggtgttggaggaggagctga 246749
>dbj|AK102913.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033113M01, full insert sequence Length = 2519 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 596 ccttgatgaggttgcttggt 615 |||||||||||||||||||| Sbjct: 673 ccttgatgaggttgcttggt 692
>gb|DQ341430.1| Lynx lynx steroid 21-hydroxylase gene, complete cds Length = 2955 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 278 tctggaggcctgggttgggg 297 |||||||||||||||||||| Sbjct: 1335 tctggaggcctgggttgggg 1316
>dbj|AK064220.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-104-F12, full insert sequence Length = 1542 Score = 40.1 bits (20), Expect = 9.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 611 ttggtgttgcccgcggcggcgaggccgt 638 ||||||||||| ||||||||||||||| Sbjct: 70 ttggtgttgccgtcggcggcgaggccgt 43
>gb|AF026169.1|AF026169 Homo sapiens SALF (SALF) mRNA, complete cds Length = 3824 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 416 tggaggaggagctgatgaag 435 |||||||||||||||||||| Sbjct: 1292 tggaggaggagctgatgaag 1311
>gb|AC007446.8|AC007446 Homo sapiens, clone hRPK.67_A_1, complete sequence Length = 177471 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 44 tgaaaaattaaacacaactt 63 |||||||||||||||||||| Sbjct: 126735 tgaaaaattaaacacaactt 126754
>gb|AC006289.1|AC006289 Mus musculus chromosome 17, clone 29_N_7, complete sequence Length = 201986 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 278 tctggaggcctgggttgggg 297 |||||||||||||||||||| Sbjct: 197509 tctggaggcctgggttgggg 197528
>emb|CT025759.14| Mouse DNA sequence from clone RP24-317H19 on chromosome 17, complete sequence Length = 171682 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 278 tctggaggcctgggttgggg 297 |||||||||||||||||||| Sbjct: 31075 tctggaggcctgggttgggg 31094
>emb|CT573030.2| Mouse DNA sequence from clone RP24-100B3 on chromosome 17, complete sequence Length = 111957 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 278 tctggaggcctgggttgggg 297 |||||||||||||||||||| Sbjct: 59098 tctggaggcctgggttgggg 59117
>ref|NM_009995.1| Mus musculus cytochrome P450, family 21, subfamily a, polypeptide 1 (Cyp21a1), mRNA Length = 1464 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 278 tctggaggcctgggttgggg 297 |||||||||||||||||||| Sbjct: 658 tctggaggcctgggttgggg 639
>gb|DP000022.1| Microcebus murinus target 1 genomic scaffold Length = 1595145 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 38 ttgatatgaaaaattaaaca 57 |||||||||||||||||||| Sbjct: 631265 ttgatatgaaaaattaaaca 631284
>gb|AF440523.1| Pseudomonas aeruginosa strain C genomic sequence, gene island PAGI-2(C) Length = 158230 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 417 ggaggaggagctgatgaagc 436 |||||||||||||||||||| Sbjct: 111941 ggaggaggagctgatgaagc 111960
>emb|AL669898.17| Mouse DNA sequence from clone RP23-6C3 on chromosome X, complete sequence Length = 220201 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 411 ggtgttggaggaggagctga 430 |||||||||||||||||||| Sbjct: 99853 ggtgttggaggaggagctga 99872
>emb|AL671881.8| Mouse DNA sequence from clone RP23-206E1 on chromosome X, complete sequence Length = 195413 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 411 ggtgttggaggaggagctga 430 |||||||||||||||||||| Sbjct: 64838 ggtgttggaggaggagctga 64819
>gb|M64933.1|MUSSLPSEXB Mouse nonfunctional sex-limited protein, and cytochrome P-450 (Cyp21) genes, complete cds Length = 26307 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 278 tctggaggcctgggttgggg 297 |||||||||||||||||||| Sbjct: 24358 tctggaggcctgggttgggg 24339
>gb|M73820.1|MUSSLPSEXA Mouse sex-limited protein (SlpA) gene, exons 24-41, and cytochrome P-450 (Cyp21(w7A)) gene, exons 1-7 Length = 12544 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 278 tctggaggcctgggttgggg 297 |||||||||||||||||||| Sbjct: 12129 tctggaggcctgggttgggg 12110
>gb|M15008.1|MUS21OHA2 Mouse steroid 21-hydroxylase B (21-OHase B) gene, complete cds Length = 3163 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 278 tctggaggcctgggttgggg 297 |||||||||||||||||||| Sbjct: 1292 tctggaggcctgggttgggg 1273
>gb|M15009.1|MUS21OHA1 Mouse steroid 21-hydroxylase A (21-OHase A) gene, complete cds Length = 3307 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 278 tctggaggcctgggttgggg 297 |||||||||||||||||||| Sbjct: 1516 tctggaggcctgggttgggg 1497
>gb|L26525.1|RATPTK3D Rattus norvegicus tyrosine kinase receptor (Ptk-3) gene, complete cds Length = 3743 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 411 ggtgttggaggaggagctga 430 |||||||||||||||||||| Sbjct: 1527 ggtgttggaggaggagctga 1546 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,250,004 Number of Sequences: 3902068 Number of extensions: 5250004 Number of successful extensions: 122271 Number of sequences better than 10.0: 123 Number of HSP's better than 10.0 without gapping: 124 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 120267 Number of HSP's gapped (non-prelim): 1967 length of query: 678 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 655 effective length of database: 17,143,297,704 effective search space: 11228859996120 effective search space used: 11228859996120 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
