>gb|AC166333.9| Mus musculus chromosome 1, clone RP23-395A13, complete sequence
          Length = 188044

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                       
Query: 21   agaaaataaangaaacaaaataaatca 47
            |||||||||| |||| |||||||||||
Sbjct: 6932 agaaaataaaagaaataaaataaatca 6958

>emb|CR391993.14| Zebrafish DNA sequence from clone DKEY-3E17 in linkage group 22, complete
              sequence
          Length = 122651

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 23     aaaataaangaaacaaaataaat 45
              |||||||| ||||||||||||||
Sbjct: 100598 aaaataaatgaaacaaaataaat 100576

>gb|AC125400.4| Mus musculus BAC clone RP24-380E10 from chromosome 10, complete
             sequence
          Length = 154681

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 18    ttcagaaaataaangaaacaaaa 40
             ||||||||||||| |||||||||
Sbjct: 76538 ttcagaaaataaatgaaacaaaa 76516

>dbj|AB210104.1| Mandarina aureola mRNA for Dermatopontin1, partial cds
          Length = 311

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                  
Query: 23  aaaataaangaaacaaaataaat 45
           |||||||| ||||||||||||||
Sbjct: 259 aaaataaatgaaacaaaataaat 281

>gb|AC084292.23|AC084292 Mus musculus 1 BAC RP23-254E8 (Roswell Park Cancer Institute Mouse BAC
              Library) complete sequence
          Length = 192003

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                         
Query: 21     agaaaataaangaaacaaaataaatca 47
              |||||||||| |||| |||||||||||
Sbjct: 154807 agaaaataaaagaaataaaataaatca 154833

>emb|CR381582.9| Zebrafish DNA sequence from clone DKEY-28M3 in linkage group 18, complete
              sequence
          Length = 215124

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 23     aaaataaangaaacaaaataaat 45
              |||||||| ||||||||||||||
Sbjct: 122384 aaaataaatgaaacaaaataaat 122362

>gb|AC165974.4| Mus musculus BAC clone RP23-16J4 from chromosome 6, complete sequence
          Length = 237816

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 148   agatgtacatgccactact 166
             |||||||||||||||||||
Sbjct: 83820 agatgtacatgccactact 83802

>gb|AY593480.1| Collimonas fungivorans fosmid CFUFOS26, complete sequence
          Length = 34507

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 70    ataaacgcagcggtgcgca 88
             |||||||||||||||||||
Sbjct: 33403 ataaacgcagcggtgcgca 33385

>gb|AC125167.4| Mus musculus BAC clone RP24-445E10 from chromosome 1, complete sequence
          Length = 167342

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 21/22 (95%)
 Strand = Plus / Plus

                                   
Query: 20    cagaaaataaangaaacaaaat 41
             ||||||||||| ||||||||||
Sbjct: 73113 cagaaaataaaagaaacaaaat 73134

>emb|BX677675.9| Zebrafish DNA sequence from clone DKEYP-90G12 in linkage group 2,
             complete sequence
          Length = 124301

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 21/22 (95%)
 Strand = Plus / Plus

                                   
Query: 24    aaataaangaaacaaaataaat 45
             ||||||| ||||||||||||||
Sbjct: 17918 aaataaatgaaacaaaataaat 17939

>gb|AC124451.4| Mus musculus BAC clone RP24-218I3 from chromosome 9, complete sequence
          Length = 168315

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 32     gaaacaaaataaatcagac 50
              |||||||||||||||||||
Sbjct: 122327 gaaacaaaataaatcagac 122345

>gb|AC132600.3| Mus musculus BAC clone RP24-134A5 from chromosome 3, complete sequence
          Length = 160339

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 21/22 (95%)
 Strand = Plus / Plus

                                   
Query: 23    aaaataaangaaacaaaataaa 44
             |||||||| |||||||||||||
Sbjct: 83163 aaaataaaagaaacaaaataaa 83184

>gb|CP000323.1| Psychrobacter cryohalolentis K5, complete genome
          Length = 3059876

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 166     ttttagataatagcgttgg 184
               |||||||||||||||||||
Sbjct: 2475586 ttttagataatagcgttgg 2475604

>emb|BX323451.12| Zebrafish DNA sequence from clone DKEY-49H9 in linkage group 8,
             complete sequence
          Length = 211489

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 21/22 (95%)
 Strand = Plus / Minus

                                   
Query: 23    aaaataaangaaacaaaataaa 44
             |||||||| |||||||||||||
Sbjct: 10612 aaaataaatgaaacaaaataaa 10591

>emb|CR788312.9| Zebrafish DNA sequence from clone DKEY-192D9, complete sequence
          Length = 177966

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 21/22 (95%)
 Strand = Plus / Plus

                                  
Query: 24   aaataaangaaacaaaataaat 45
            ||||||| ||||||||||||||
Sbjct: 4544 aaataaatgaaacaaaataaat 4565

>emb|CR513789.22| Zebrafish DNA sequence from clone CH211-212J20 in linkage group 22,
             complete sequence
          Length = 193420

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 143   cctcgagatgtacatgcca 161
             |||||||||||||||||||
Sbjct: 42172 cctcgagatgtacatgcca 42154

>emb|CR769766.10| Zebrafish DNA sequence from clone DKEY-207J12 in linkage group 2,
             complete sequence
          Length = 201113

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 21/22 (95%)
 Strand = Plus / Minus

                                   
Query: 25    aataaangaaacaaaataaatc 46
             |||||| |||||||||||||||
Sbjct: 50049 aataaatgaaacaaaataaatc 50028

>dbj|AB210099.1| Euhadra brandtii mRNA for Dermatopontin1, partial cds
          Length = 292

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 21/22 (95%)
 Strand = Plus / Plus

                                 
Query: 23  aaaataaangaaacaaaataaa 44
           |||||||| |||||||||||||
Sbjct: 259 aaaataaacgaaacaaaataaa 280

>emb|BX323450.8| Zebrafish DNA sequence from clone RP71-40N14 in linkage group 17,
              complete sequence
          Length = 178920

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 21/22 (95%)
 Strand = Plus / Minus

                                    
Query: 24     aaataaangaaacaaaataaat 45
              ||||||| ||||||||||||||
Sbjct: 139983 aaataaatgaaacaaaataaat 139962

>gb|AC156641.2| Mus musculus BAC clone RP23-204J8 from chromosome 9, complete sequence
          Length = 219981

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 21/22 (95%)
 Strand = Plus / Minus

                                   
Query: 23    aaaataaangaaacaaaataaa 44
             |||||||| |||||||||||||
Sbjct: 77711 aaaataaaagaaacaaaataaa 77690

>emb|BX072537.8| Zebrafish DNA sequence from clone DKEY-15F17, complete sequence
          Length = 226685

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 32    gaaacaaaataaatcagac 50
             |||||||||||||||||||
Sbjct: 90933 gaaacaaaataaatcagac 90915

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 21/22 (95%)
 Strand = Plus / Minus

                                      
Query: 17       cttcagaaaataaangaaacaa 38
                |||||||||||||| |||||||
Sbjct: 23103943 cttcagaaaataaaagaaacaa 23103922

>gb|AC078809.9| Homo sapiens 3 BAC RP11-600G3 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 162646

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 21/22 (95%)
 Strand = Plus / Plus

                                    
Query: 21     agaaaataaangaaacaaaata 42
              |||||||||| |||||||||||
Sbjct: 119414 agaaaataaaagaaacaaaata 119435

>gb|AC069240.23| Homo sapiens 12 BAC RP11-385N17 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 210010

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 24/26 (92%)
 Strand = Plus / Minus

                                        
Query: 19     tcagaaaataaangaaacaaaataaa 44
              ||||||||||||  ||||||||||||
Sbjct: 110102 tcagaaaataaaataaacaaaataaa 110077

>emb|BX470215.5| Mouse DNA sequence from clone RP24-558L5 on chromosome X, complete
             sequence
          Length = 137502

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 24/26 (92%)
 Strand = Plus / Minus

                                       
Query: 17    cttcagaaaataaangaaacaaaata 42
             ||||| |||||||| |||||||||||
Sbjct: 31280 cttcaaaaaataaatgaaacaaaata 31255

>gb|AC145691.5| Mus musculus chromosome 1, clone RP24-278B15, complete sequence
          Length = 164151

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 12    agtggcttcagaaaataaa 30
             |||||||||||||||||||
Sbjct: 73306 agtggcttcagaaaataaa 73288

>dbj|AP003845.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1699_E05
          Length = 170666

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 21/22 (95%)
 Strand = Plus / Minus

                                   
Query: 17    cttcagaaaataaangaaacaa 38
             |||||||||||||| |||||||
Sbjct: 48127 cttcagaaaataaaagaaacaa 48106

>emb|AL954148.15| Zebrafish DNA sequence from clone CH211-212L17 in linkage group 22,
              complete sequence
          Length = 201639

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 143    cctcgagatgtacatgcca 161
              |||||||||||||||||||
Sbjct: 145534 cctcgagatgtacatgcca 145552

>emb|BX927095.15| Zebrafish DNA sequence from clone CH211-202E13 in linkage group 17,
             complete sequence
          Length = 211277

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 21/22 (95%)
 Strand = Plus / Minus

                                   
Query: 24    aaataaangaaacaaaataaat 45
             ||||||| ||||||||||||||
Sbjct: 12120 aaataaatgaaacaaaataaat 12099

>emb|BX000524.6| Zebrafish DNA sequence from clone DKEY-10H3, complete sequence
          Length = 188685

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 21/22 (95%)
 Strand = Plus / Plus

                                    
Query: 24     aaataaangaaacaaaataaat 45
              ||||||| ||||||||||||||
Sbjct: 178459 aaataaatgaaacaaaataaat 178480

>emb|CT485787.6| Mouse DNA sequence from clone RP23-412N8 on chromosome 14, complete
             sequence
          Length = 210837

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 160   cactacttttagataatag 178
             |||||||||||||||||||
Sbjct: 62794 cactacttttagataatag 62812

>emb|CR394551.9| Zebrafish DNA sequence from clone CH211-285E3 in linkage group 10,
             complete sequence
          Length = 121335

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 21/22 (95%)
 Strand = Plus / Minus

                                   
Query: 20    cagaaaataaangaaacaaaat 41
             ||||||||||| ||||||||||
Sbjct: 28271 cagaaaataaaagaaacaaaat 28250

>emb|CR855327.11| Zebrafish DNA sequence from clone DKEY-84C11 in linkage group 1, complete
              sequence
          Length = 183806

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 21/22 (95%)
 Strand = Plus / Plus

                                    
Query: 24     aaataaangaaacaaaataaat 45
              ||||||| ||||||||||||||
Sbjct: 150659 aaataaatgaaacaaaataaat 150680

>emb|X79401.1|TCVSG3 T.congolense (clone BENat 1.3) mRNA for variable surface glycoprotein
          Length = 1310

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 12   agtggcttcagaaaataaa 30
            |||||||||||||||||||
Sbjct: 1003 agtggcttcagaaaataaa 1021


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,440,046
Number of Sequences: 3902068
Number of extensions: 1440046
Number of successful extensions: 107382
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 107245
Number of HSP's gapped (non-prelim): 137
length of query: 195
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 173
effective length of database: 17,147,199,772
effective search space: 2966465560556
effective search space used: 2966465560556
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)