>gb|BT018840.1| Zea mays clone EL01N0553A12.d mRNA sequence
          Length = 2469

 Score =  147 bits (74), Expect = 4e-32
 Identities = 111/122 (90%), Gaps = 1/122 (0%)
 Strand = Plus / Minus

                                                                        
Query: 382  gcatttgcttcgatccagtcgaaagcaagtggactgaggaaagcatcagggattccgaaa 441
            |||||||| || |||||||| |||||||||||||| ||||| ||||||||||||||||||
Sbjct: 2173 gcatttgcctcaatccagtcaaaagcaagtggactaaggaaggcatcagggattccgaaa 2114

                                                                        
Query: 442  gaaccgacaatagcaagcgcatggggccctgagttcactgcacagtatcatgacttcttt 501
            |||| ||||| ||||||||||||||| ||||||||||||||||||| ||  |||||||||
Sbjct: 2113 gaactgacaacagcaagcgcatgggg-cctgagttcactgcacagtttctggacttcttt 2055

              
Query: 502  cc 503
            ||
Sbjct: 2054 cc 2053

>gb|AY106428.1| Zea mays PCO134965 mRNA sequence
          Length = 1659

 Score =  147 bits (74), Expect = 4e-32
 Identities = 111/122 (90%), Gaps = 1/122 (0%)
 Strand = Plus / Minus

                                                                        
Query: 382  gcatttgcttcgatccagtcgaaagcaagtggactgaggaaagcatcagggattccgaaa 441
            |||||||| || |||||||| |||||||||||||| ||||| ||||||||||||||||||
Sbjct: 1318 gcatttgcctcaatccagtcaaaagcaagtggactaaggaaggcatcagggattccgaaa 1259

                                                                        
Query: 442  gaaccgacaatagcaagcgcatggggccctgagttcactgcacagtatcatgacttcttt 501
            ||||  |||| ||||||||||||||| ||||||||||||||||||| ||| |||||||||
Sbjct: 1258 gaactaacaacagcaagcgcatgggg-cctgagttcactgcacagtttcaggacttcttt 1200

              
Query: 502  cc 503
            ||
Sbjct: 1199 cc 1198

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score =  117 bits (59), Expect = 4e-23
 Identities = 108/123 (87%), Gaps = 1/123 (0%)
 Strand = Plus / Plus

                                                                            
Query: 382      gcatttgcttcgatccagtcgaaagcaagtggactgaggaaagcatcagggattccgaaa 441
                |||||||| || |||||||| ||||| ||||| || ||||| ||||| ||||||||||| 
Sbjct: 14347217 gcatttgcctcaatccagtcaaaagcgagtgggctaaggaaggcatctgggattccgaag 14347276

                                                                            
Query: 442      gaaccgacaatagcaagcgcatggggccctgagttcactgcacagtatcatgacttcttt 501
                |||| |||||||||||| || ||||| ||||||||||||||||||| |||| ||||||||
Sbjct: 14347277 gaactgacaatagcaagtgcgtgggg-cctgagttcactgcacagtgtcatcacttcttt 14347335

                   
Query: 502      cct 504
                |||
Sbjct: 14347336 cct 14347338



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 11      ctggtctggcttattgctttgtgta 35
               ||||||||||| |||||||||||||
Sbjct: 3672910 ctggtctggctgattgctttgtgta 3672934

>dbj|AP003574.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0526E12
          Length = 150872

 Score =  117 bits (59), Expect = 4e-23
 Identities = 108/123 (87%), Gaps = 1/123 (0%)
 Strand = Plus / Plus

                                                                         
Query: 382   gcatttgcttcgatccagtcgaaagcaagtggactgaggaaagcatcagggattccgaaa 441
             |||||||| || |||||||| ||||| ||||| || ||||| ||||| ||||||||||| 
Sbjct: 75092 gcatttgcctcaatccagtcaaaagcgagtgggctaaggaaggcatctgggattccgaag 75151

                                                                         
Query: 442   gaaccgacaatagcaagcgcatggggccctgagttcactgcacagtatcatgacttcttt 501
             |||| |||||||||||| || ||||| ||||||||||||||||||| |||| ||||||||
Sbjct: 75152 gaactgacaatagcaagtgcgtgggg-cctgagttcactgcacagtgtcatcacttcttt 75210

                
Query: 502   cct 504
             |||
Sbjct: 75211 cct 75213

>dbj|AK066934.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013093A09, full
            insert sequence
          Length = 2372

 Score =  117 bits (59), Expect = 4e-23
 Identities = 108/123 (87%), Gaps = 1/123 (0%)
 Strand = Plus / Minus

                                                                        
Query: 382  gcatttgcttcgatccagtcgaaagcaagtggactgaggaaagcatcagggattccgaaa 441
            |||||||| || |||||||| ||||| ||||| || ||||| ||||| ||||||||||| 
Sbjct: 2104 gcatttgcctcaatccagtcaaaagcgagtgggctaaggaaggcatctgggattccgaag 2045

                                                                        
Query: 442  gaaccgacaatagcaagcgcatggggccctgagttcactgcacagtatcatgacttcttt 501
            |||| |||||||||||| || ||||| ||||||||||||||||||| |||| ||||||||
Sbjct: 2044 gaactgacaatagcaagtgcgtgggg-cctgagttcactgcacagtgtcatcacttcttt 1986

               
Query: 502  cct 504
            |||
Sbjct: 1985 cct 1983

>gb|AC129552.20| Mus musculus chromosome 5, clone RP24-122N24, complete sequence
          Length = 153520

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 56     aaaaaagaaagaatttacagca 77
              ||||||||||||||||||||||
Sbjct: 116412 aaaaaagaaagaatttacagca 116391

>ref|NM_180905.1| Arabidopsis thaliana unknown protein AT5G61020 transcript variant
            AT5G61020.1 mRNA, complete cds
          Length = 1851

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 125  atcagcttattcagttttata 145
            |||||||||||||||||||||
Sbjct: 1809 atcagcttattcagttttata 1829

>ref|NM_125495.2| Arabidopsis thaliana unknown protein AT5G61020 transcript variant
            AT5G61020.2 mRNA, complete cds
          Length = 1865

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 125  atcagcttattcagttttata 145
            |||||||||||||||||||||
Sbjct: 1823 atcagcttattcagttttata 1843

>gb|BC082447.1| Xenopus laevis MGC83937 protein, mRNA (cDNA clone MGC:83937
            IMAGE:6861687), complete cds
          Length = 3699

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 267  ggaagcaacaaatgcacctgtattt 291
            |||||||||||||||| ||||||||
Sbjct: 1221 ggaagcaacaaatgcatctgtattt 1245

>emb|AL603844.7| Human DNA sequence from clone RP11-541I21 on chromosome 1, complete
              sequence
          Length = 220185

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 47     catattgtcaaaaaagaaagaattt 71
              |||||||||||||| ||||||||||
Sbjct: 189514 catattgtcaaaaatgaaagaattt 189490

>gb|AC100868.2| Homo sapiens chromosome 8, clone RP11-246K8, complete sequence
          Length = 160939

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 47    catattgtcaaaaaagaaagaattt 71
             |||||||||||||| ||||||||||
Sbjct: 43430 catattgtcaaaaatgaaagaattt 43454

>gb|AC026596.9| Homo sapiens chromosome 8, clone RP11-380O15, complete sequence
          Length = 165158

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 47     catattgtcaaaaaagaaagaattt 71
              |||||||||||||| ||||||||||
Sbjct: 101486 catattgtcaaaaatgaaagaattt 101510

>ref|NM_137537.2| Drosophila melanogaster CG15099-RA (CG15099), mRNA
          Length = 8331

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 124  tatcagcttattcagttttat 144
            |||||||||||||||||||||
Sbjct: 1593 tatcagcttattcagttttat 1573

>gb|AC092817.2| Homo sapiens chromosome 8, clone RP11-240B13, complete sequence
          Length = 168719

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 47    catattgtcaaaaaagaaagaattt 71
             |||||||||||||| ||||||||||
Sbjct: 44809 catattgtcaaaaatgaaagaattt 44785

>gb|AY069775.1| Drosophila melanogaster SD01562 full length cDNA
          Length = 7080

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 124 tatcagcttattcagttttat 144
           |||||||||||||||||||||
Sbjct: 323 tatcagcttattcagttttat 303

>gb|AC099016.1| Drosophila melanogaster, chromosome 2R, region 56A-56A, BAC clone
             BACR27C21, complete sequence
          Length = 173373

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 124   tatcagcttattcagttttat 144
             |||||||||||||||||||||
Sbjct: 73706 tatcagcttattcagttttat 73726

>dbj|AP002854.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0014B15
          Length = 158821

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 11    ctggtctggcttattgctttgtgta 35
             ||||||||||| |||||||||||||
Sbjct: 67138 ctggtctggctgattgctttgtgta 67162

>dbj|AB006696.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MAF19
          Length = 78379

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 125  atcagcttattcagttttata 145
            |||||||||||||||||||||
Sbjct: 6180 atcagcttattcagttttata 6160

>gb|AE003798.3| Drosophila melanogaster chromosome 2R, section 52 of 73 of the complete
              sequence
          Length = 242365

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 124    tatcagcttattcagttttat 144
              |||||||||||||||||||||
Sbjct: 214670 tatcagcttattcagttttat 214690

>gb|AC004298.1|AC004298 Drosophila melanogaster DNA sequence (P1 DS02599 (D184)), complete
             sequence
          Length = 81522

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 124   tatcagcttattcagttttat 144
             |||||||||||||||||||||
Sbjct: 54814 tatcagcttattcagttttat 54794

>gb|AC009357.8| Drosophila melanogaster clone BACR18I07, complete sequence
          Length = 179374

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 76     caaacaacattgtatacatt 95
              ||||||||||||||||||||
Sbjct: 109405 caaacaacattgtatacatt 109386

>gb|AY137375.1| Bacillus subtilis bacillomycin D operon, complete sequence; and
             flanking genes
          Length = 46513

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 99    tacgttgtgaacacctgttg 118
             ||||||||||||||||||||
Sbjct: 40538 tacgttgtgaacacctgttg 40519

>emb|CR628331.7| Zebrafish DNA sequence from clone DKEY-208C12 in linkage group 17,
             complete sequence
          Length = 92644

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 32    tgtactattcaacaacatattgtc 55
             |||| |||||||||||||||||||
Sbjct: 51293 tgtattattcaacaacatattgtc 51316

>gb|AC117217.2| Mus musculus BAC clone RP23-318C3 from 17, complete sequence
          Length = 199711

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 52    tgtcaaaaaagaaagaattt 71
             ||||||||||||||||||||
Sbjct: 41389 tgtcaaaaaagaaagaattt 41408

>gb|AC144477.16| Medicago truncatula clone mth2-6k4, complete sequence
          Length = 112241

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 49    tattgtcaaaaaagaaagaa 68
             ||||||||||||||||||||
Sbjct: 47157 tattgtcaaaaaagaaagaa 47138

>emb|AL645907.9| Mouse DNA sequence from clone RP23-9N7 on chromosome 11 Contains the 5'
              end of a novel gene, a novel gene, the Clk4 gene for CDC
              like kinase 4, the 5' end of the Col23a1 gene for
              procollagen (type XXIII, alpha 1) and two CpG islands,
              complete sequence
          Length = 219268

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 81     aacattgtatacattatttacgttgtga 108
              ||||||||||  ||||||||||||||||
Sbjct: 137330 aacattgtatttattatttacgttgtga 137357

>emb|AL627256.5| Zebrafish DNA sequence from clone RP71-1L10 in linkage group 8 Contains
             part of a gene for a novel peptide transporter, complete
             sequence
          Length = 169757

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 67    aatttacagcaaacaacatt 86
             ||||||||||||||||||||
Sbjct: 40836 aatttacagcaaacaacatt 40817

>emb|BX323887.10| Zebrafish DNA sequence from clone CH211-274C22 in linkage group 13,
            complete sequence
          Length = 134841

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 56   aaaaaagaaagaatttacagcaaa 79
            |||||||||| |||||||||||||
Sbjct: 1150 aaaaaagaaataatttacagcaaa 1127

>gb|AC020630.21| Homo sapiens 3 BAC RP11-197N19 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 164519

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 67    aatttacagcaaacaacatt 86
             ||||||||||||||||||||
Sbjct: 46046 aatttacagcaaacaacatt 46065

>gb|AC107965.4| Homo sapiens chromosome 8, clone CTD-2332A4, complete sequence
          Length = 112032

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 70    ttacagcaaacaacattgta 89
             ||||||||||||||||||||
Sbjct: 83202 ttacagcaaacaacattgta 83221

>gb|AC009898.6| Homo sapiens chromosome 8, clone RP11-138H14, complete sequence
          Length = 168539

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 70     ttacagcaaacaacattgta 89
              ||||||||||||||||||||
Sbjct: 132333 ttacagcaaacaacattgta 132314

>gb|AC009230.3| Homo sapiens BAC clone RP11-343B21 from 2, complete sequence
          Length = 173993

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 152   atttagagaagacagtccatgaat 175
             ||||||| ||||||||||||||||
Sbjct: 15257 atttagataagacagtccatgaat 15234

>gb|AC097227.3| Papio anubis clone RP41-327F23, complete sequence
          Length = 138345

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 184   catcaaattccctattttct 203
             ||||||||||||||||||||
Sbjct: 75830 catcaaattccctattttct 75849

>gb|AC104751.9| Mus musculus chromosome 5, clone RP24-167K2, complete sequence
          Length = 151010

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 307    aatagtttcacatttaaggg 326
              ||||||||||||||||||||
Sbjct: 108763 aatagtttcacatttaaggg 108744

>gb|AC090710.16| Homo sapiens 12 BAC RP11-754J4 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 174302

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 14    gtctggcttattgctttgtg 33
             ||||||||||||||||||||
Sbjct: 48180 gtctggcttattgctttgtg 48199

>emb|CT030725.15| Mouse DNA sequence from clone RP24-281O2 on chromosome 16, complete
             sequence
          Length = 115213

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 45    aacatattgtcaaaaaagaaagaa 68
             |||||||||||||||||| |||||
Sbjct: 32347 aacatattgtcaaaaaaggaagaa 32370

>gb|AE003601.4| Drosophila melanogaster chromosome 3R, section 7 of 118 of the complete
              sequence
          Length = 305165

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 76     caaacaacattgtatacatt 95
              ||||||||||||||||||||
Sbjct: 252206 caaacaacattgtatacatt 252187


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,048,750
Number of Sequences: 3902068
Number of extensions: 5048750
Number of successful extensions: 118088
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 117963
Number of HSP's gapped (non-prelim): 120
length of query: 504
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 482
effective length of database: 17,147,199,772
effective search space: 8264950290104
effective search space used: 8264950290104
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)