ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd3a21
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1dbj|AK060678.1| Oryza sativa (japonica cultivar-group) cDNA clon... 466 e-128
2gb|AC135418.3| Oryza sativa (japonica cultivar-group) chromosome... 139 1e-29
3dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 139 1e-29
4dbj|AB018798.1| Plasmodium yoelii gene for P-Type ATPase, comple... 44 0.54
5gb|AC140134.2| Homo sapiens chromosome 5 clone RP11-1319K7, comp... 42 2.1
6gb|AC139778.2| Homo sapiens chromosome 5 clone RP11-1012N14, com... 42 2.1
7gb|AC139277.2| Homo sapiens chromosome 5 clone RP11-619K7, compl... 42 2.1
8gb|AC010217.6| Homo sapiens chromosome 5 clone CTC-202F24, compl... 42 2.1
9gb|AC016554.8| Homo sapiens chromosome 5 clone CTC-340H12, compl... 42 2.1
10gb|AC022119.4|AC022119 Homo sapiens chromosome 5 clone CTC-566F1... 42 2.1
11gb|AC139834.2| Homo sapiens chromosome 5 clone RP11-974F13, comp... 42 2.1
12gb|AC139494.2| Homo sapiens chromosome 5 clone RP11-846E15, comp... 42 2.1
13gb|AC004999.1|AC004999 Homo sapiens PAC clone RP1-215P15 from 5q... 42 2.1
14emb|AL672307.9| Mouse DNA sequence from clone RP23-141N2 on chro... 42 2.1
15gb|AC154031.1| Drosophila melanogaster clone CH223-18M04, comple... 40 8.4
16gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence 40 8.4
17gb|AC078977.6| Oryza sativa (japonica cultivar-group) chromosome... 40 8.4
18gb|CP000068.1| Trypanosoma brucei chromosome 5, complete sequence 40 8.4
19gb|AC159443.1| Trypanosoma brucei chromosome 5 clone RPCI93-30H1... 40 8.4
20gb|AY091599.1| Infectious salmon anemia virus isolate RPC/NB 980... 40 8.4
21gb|AC072052.6| Homo sapiens BAC clone CTD-2195F21 from 7, comple... 40 8.4
22gb|AC115290.5| Mus musculus BAC clone RP23-65M10 from chromosome... 40 8.4
23gb|AY118142.1| Uncultured Desulfobacterium sp. clone OR-M2 16S r... 40 8.4
24gb|AY167025.1| Schistosoma haematobium acetylcholinesterase gene... 40 8.4
25emb|AL607106.10| Human DNA sequence from clone RP11-207N22 on ch... 40 8.4
26gb|AC093574.3| Homo sapiens chromosome 3 clone RP11-178K11, comp... 40 8.4
27gb|AC165064.2| Phakopsora pachyrhizi clone JGIAFNA-2193J23, comp... 40 8.4
28gb|AC090204.11| Homo sapiens chromosome 8, clone RP11-11N9, comp... 40 8.4
29gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome 40 8.4
30gb|AC113195.8| Homo sapiens chromosome 18, clone RP11-1112K22, c... 40 8.4
31gb|AC113209.4| Homo sapiens chromosome 8, clone RP11-1002K11, co... 40 8.4
32gb|AC087534.8| Homo sapiens chromosome 18, clone RP11-716B20, co... 40 8.4
33ref|XM_940588.1| PREDICTED: Homo sapiens similar to CG11064-PA (... 40 8.4
34gb|AF306549.1|AF306549 Infectious salmon anemia virus putative n... 40 8.4
35gb|AC012087.10|AC012087 Homo sapiens 3 BAC RP11-317L10,RP11-150K... 40 8.4
36gb|AE003846.5| Drosophila melanogaster chromosome 4, section 5 o... 40 8.4
37gb|AC122767.16| Mus musculus chromosome 7, clone RP24-143L4, com... 40 8.4
38gb|AC136741.24| Mus musculus chromosome 7, clone RP23-172P1, com... 40 8.4

>dbj|AK060678.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-029-C06, full
           insert sequence
          Length = 1032

 Score =  466 bits (235), Expect = e-128
 Identities = 445/515 (86%)
 Strand = Plus / Minus

                                                                       
Query: 58  agacatagatacagcagccgaacgcagcgtcactccatctgtctcccacctcgtctctgg 117
           ||||| ||||||||||||||| |||| | |||| |||||    |||||| | ||||||||
Sbjct: 851 agacaaagatacagcagccgatcgcaacttcacgccatcatcgtcccactttgtctctgg 792

                                                                       
Query: 118 agcagtggcagcagcgatatatgtcttcccactatccacggtggccattagagcaacatg 177
           |||||||||| | || ||||||||||| ||||||| ||| || ||||||| |||||||||
Sbjct: 791 agcagtggcaccggcaatatatgtctttccactattcacagtagccattacagcaacatg 732

                                                                       
Query: 178 ttgtttgtcaaaaccaaattcatagaagtaatacatccttataccctcctgatccttaac 237
           || |||||| | |||||| ||||| ||||||||  |||||||| | || | |||||||||
Sbjct: 731 ttctttgtccacaccaaactcataaaagtaatatgtccttatatcatcttcatccttaac 672

                                                                       
Query: 238 tttaattgttcgagctgagtatatttttgcactgccaggtacaaataacttggatgcctc 297
           ||||||||||||||||||||||| |||||| |  ||||||||||||| ||| ||||||||
Sbjct: 671 tttaattgttcgagctgagtataattttgcgccaccaggtacaaatatctttgatgcctc 612

                                                                       
Query: 298 ctttagagtgcccaactccgttatatctttggcctctaggaatgtgatcttgagctgatt 357
           ||||| ||||||||  || |||| |||||||||||||||||||||||| |||||||||||
Sbjct: 611 ctttaaagtgcccaggtctgttacatctttggcctctaggaatgtgattttgagctgatt 552

                                                                       
Query: 358 ggatggcttgattaccacacttacaagttctgacctgtctggagatgcgaaccgagctgc 417
            |||||||| |||||||| ||||||||||| |||||||| ||||| ||||| ||||| ||
Sbjct: 551 cgatggcttaattaccacgcttacaagttcagacctgtccggagacgcgaagcgagcagc 492

                                                                       
Query: 418 gtacgccctgaccttggccttgtcgccataataggtcatcgcggcgctgaaatcctcggg 477
           ||| | ||||  ||| ||||||||||| || ||||||| | || || |||| ||||||||
Sbjct: 491 gtatgtcctgggcttcgccttgtcgccgtagtaggtcaccccgacgttgaactcctcggg 432

                                                                       
Query: 478 ctccaagacgtcgtcgaaggacggcggcacgcggatggagaagccgctgccgtagtactg 537
           |||||||| |||||||||||| || || ||||||||||||||||||||||||||||||||
Sbjct: 431 ctccaagatgtcgtcgaaggaagggggaacgcggatggagaagccgctgccgtagtactg 372

                                              
Query: 538 cgaccacgacctcgtgtttgcgatgccgaccagca 572
           |||||||||| | ||||| ||||||||| ||||||
Sbjct: 371 cgaccacgacttggtgttcgcgatgccgcccagca 337



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>gb|AC135418.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0035J16, complete sequence
          Length = 170233

 Score =  139 bits (70), Expect = 1e-29
 Identities = 94/102 (92%)
 Strand = Plus / Minus

                                                                         
Query: 471   cctcgggctccaagacgtcgtcgaaggacggcggcacgcggatggagaagccgctgccgt 530
             ||||||||||||||| |||||||||||| || || |||||||||||||||||||||||||
Sbjct: 73843 cctcgggctccaagatgtcgtcgaaggaagggggaacgcggatggagaagccgctgccgt 73784

                                                       
Query: 531   agtactgcgaccacgacctcgtgtttgcgatgccgaccagca 572
             ||||||||||||||||| | ||||| ||||||||| ||||||
Sbjct: 73783 agtactgcgaccacgacttggtgttcgcgatgccgcccagca 73742



 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 60/65 (92%)
 Strand = Plus / Minus

                                                                         
Query: 330   cctctaggaatgtgatcttgagctgattggatggcttgattaccacacttacaagttctg 389
             |||||||||||||||| ||||||||||| |||||||| |||||||| ||||||||||| |
Sbjct: 74298 cctctaggaatgtgattttgagctgattcgatggcttaattaccacgcttacaagttcag 74239

                  
Query: 390   acctg 394
             |||||
Sbjct: 74238 acctg 74234



 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 55/61 (90%)
 Strand = Plus / Minus

                                                                         
Query: 272   ccaggtacaaataacttggatgcctcctttagagtgcccaactccgttatatctttggcc 331
             ||||||||||||| ||| ||||||||||||| ||||||||  || |||||||||||||||
Sbjct: 75126 ccaggtacaaatatctttgatgcctcctttaaagtgcccaggtctgttatatctttggcc 75067

              
Query: 332   t 332
             |
Sbjct: 75066 t 75066



 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 38/39 (97%)
 Strand = Plus / Minus

                                                    
Query: 229   atccttaactttaattgttcgagctgagtatatttttgc 267
             |||||||||||||||||||||||||||||||| ||||||
Sbjct: 75787 atccttaactttaattgttcgagctgagtataattttgc 75749



 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 72/86 (83%)
 Strand = Plus / Minus

                                                                         
Query: 58    agacatagatacagcagccgaacgcagcgtcactccatctgtctcccacctcgtctctgg 117
             ||||| ||||||||||||||| |||| | |||| |||||    |||||| | ||||||||
Sbjct: 76339 agacaaagatacagcagccgatcgcaacttcacgccatcatcgtcccactttgtctctgg 76280

                                       
Query: 118   agcagtggcagcagcgatatatgtct 143
             |||||||||| | || ||||||||||
Sbjct: 76279 agcagtggcaccggcaatatatgtct 76254



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 56/65 (86%)
 Strand = Plus / Minus

                                                                         
Query: 146   ccactatccacggtggccattagagcaacatgttgtttgtcaaaaccaaattcatagaag 205
             ||||||| ||| || ||||||| ||||||||||| |||||| | |||||| ||||| |||
Sbjct: 75997 ccactattcacagtagccattacagcaacatgttctttgtccacaccaaactcataaaag 75938

                  
Query: 206   taata 210
             |||||
Sbjct: 75937 taata 75933



 Score = 48.1 bits (24), Expect = 0.035
 Identities = 57/68 (83%)
 Strand = Plus / Minus

                                                                         
Query: 390   acctgtctggagatgcgaaccgagctgcgtacgccctgaccttggccttgtcgccataat 449
             ||||||| ||||| ||||| ||||| ||||| | ||||  ||| ||||||||||| || |
Sbjct: 74041 acctgtccggagacgcgaagcgagcagcgtatgtcctgggcttcgccttgtcgccgtagt 73982

                     
Query: 450   aggtcatc 457
             ||||||||
Sbjct: 73981 aggtcatc 73974



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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score =  139 bits (70), Expect = 1e-29
 Identities = 94/102 (92%)
 Strand = Plus / Minus

                                                                            
Query: 471      cctcgggctccaagacgtcgtcgaaggacggcggcacgcggatggagaagccgctgccgt 530
                ||||||||||||||| |||||||||||| || || |||||||||||||||||||||||||
Sbjct: 19370494 cctcgggctccaagatgtcgtcgaaggaagggggaacgcggatggagaagccgctgccgt 19370435

                                                          
Query: 531      agtactgcgaccacgacctcgtgtttgcgatgccgaccagca 572
                ||||||||||||||||| | ||||| ||||||||| ||||||
Sbjct: 19370434 agtactgcgaccacgacttggtgttcgcgatgccgcccagca 19370393



 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 60/65 (92%)
 Strand = Plus / Minus

                                                                            
Query: 330      cctctaggaatgtgatcttgagctgattggatggcttgattaccacacttacaagttctg 389
                |||||||||||||||| ||||||||||| |||||||| |||||||| ||||||||||| |
Sbjct: 19370949 cctctaggaatgtgattttgagctgattcgatggcttaattaccacgcttacaagttcag 19370890

                     
Query: 390      acctg 394
                |||||
Sbjct: 19370889 acctg 19370885



 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 55/61 (90%)
 Strand = Plus / Minus

                                                                            
Query: 272      ccaggtacaaataacttggatgcctcctttagagtgcccaactccgttatatctttggcc 331
                ||||||||||||| ||| ||||||||||||| ||||||||  || |||||||||||||||
Sbjct: 19371777 ccaggtacaaatatctttgatgcctcctttaaagtgcccaggtctgttatatctttggcc 19371718

                 
Query: 332      t 332
                |
Sbjct: 19371717 t 19371717



 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 38/39 (97%)
 Strand = Plus / Minus

                                                       
Query: 229      atccttaactttaattgttcgagctgagtatatttttgc 267
                |||||||||||||||||||||||||||||||| ||||||
Sbjct: 19372438 atccttaactttaattgttcgagctgagtataattttgc 19372400



 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 72/86 (83%)
 Strand = Plus / Minus

                                                                            
Query: 58       agacatagatacagcagccgaacgcagcgtcactccatctgtctcccacctcgtctctgg 117
                ||||| ||||||||||||||| |||| | |||| |||||    |||||| | ||||||||
Sbjct: 19372990 agacaaagatacagcagccgatcgcaacttcacgccatcatcgtcccactttgtctctgg 19372931

                                          
Query: 118      agcagtggcagcagcgatatatgtct 143
                |||||||||| | || ||||||||||
Sbjct: 19372930 agcagtggcaccggcaatatatgtct 19372905



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 56/65 (86%)
 Strand = Plus / Minus

                                                                            
Query: 146      ccactatccacggtggccattagagcaacatgttgtttgtcaaaaccaaattcatagaag 205
                ||||||| ||| || ||||||| ||||||||||| |||||| | |||||| ||||| |||
Sbjct: 19372648 ccactattcacagtagccattacagcaacatgttctttgtccacaccaaactcataaaag 19372589

                     
Query: 206      taata 210
                |||||
Sbjct: 19372588 taata 19372584



 Score = 48.1 bits (24), Expect = 0.035
 Identities = 57/68 (83%)
 Strand = Plus / Minus

                                                                            
Query: 390      acctgtctggagatgcgaaccgagctgcgtacgccctgaccttggccttgtcgccataat 449
                ||||||| ||||| ||||| ||||| ||||| | ||||  ||| ||||||||||| || |
Sbjct: 19370692 acctgtccggagacgcgaagcgagcagcgtatgtcctgggcttcgccttgtcgccgtagt 19370633

                        
Query: 450      aggtcatc 457
                ||||||||
Sbjct: 19370632 aggtcatc 19370625



 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 42     tgcaaaatcatgcaagagac 61
              ||||||||||||||||||||
Sbjct: 896697 tgcaaaatcatgcaagagac 896716



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>dbj|AB018798.1| Plasmodium yoelii gene for P-Type ATPase, complete cds
          Length = 7852

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                
Query: 2  taatatataatgataatagttg 23
          ||||||||||||||||||||||
Sbjct: 45 taatatataatgataatagttg 24



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>gb|AC140134.2| Homo sapiens chromosome 5 clone RP11-1319K7, complete sequence
          Length = 217820

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 2     taatatataatgataatagtt 22
             |||||||||||||||||||||
Sbjct: 89716 taatatataatgataatagtt 89736



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>gb|AC139778.2| Homo sapiens chromosome 5 clone RP11-1012N14, complete sequence
          Length = 180014

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 2      taatatataatgataatagtt 22
              |||||||||||||||||||||
Sbjct: 137801 taatatataatgataatagtt 137781



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>gb|AC139277.2| Homo sapiens chromosome 5 clone RP11-619K7, complete sequence
          Length = 199996

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 2      taatatataatgataatagtt 22
              |||||||||||||||||||||
Sbjct: 183508 taatatataatgataatagtt 183528



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>gb|AC010217.6| Homo sapiens chromosome 5 clone CTC-202F24, complete sequence
          Length = 169137

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 2     taatatataatgataatagtt 22
             |||||||||||||||||||||
Sbjct: 63927 taatatataatgataatagtt 63907



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>gb|AC016554.8| Homo sapiens chromosome 5 clone CTC-340H12, complete sequence
          Length = 113213

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 2     taatatataatgataatagtt 22
             |||||||||||||||||||||
Sbjct: 61661 taatatataatgataatagtt 61681



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>gb|AC022119.4|AC022119 Homo sapiens chromosome 5 clone CTC-566F17, complete sequence
          Length = 155974

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 2     taatatataatgataatagtt 22
             |||||||||||||||||||||
Sbjct: 22755 taatatataatgataatagtt 22775



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>gb|AC139834.2| Homo sapiens chromosome 5 clone RP11-974F13, complete sequence
          Length = 185457

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 2      taatatataatgataatagtt 22
              |||||||||||||||||||||
Sbjct: 152531 taatatataatgataatagtt 152551



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>gb|AC139494.2| Homo sapiens chromosome 5 clone RP11-846E15, complete sequence
          Length = 210288

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 2     taatatataatgataatagtt 22
             |||||||||||||||||||||
Sbjct: 94800 taatatataatgataatagtt 94820



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>gb|AC004999.1|AC004999 Homo sapiens PAC clone RP1-215P15 from 5q12, complete sequence
          Length = 129541

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 2     taatatataatgataatagtt 22
             |||||||||||||||||||||
Sbjct: 74835 taatatataatgataatagtt 74815



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>emb|AL672307.9| Mouse DNA sequence from clone RP23-141N2 on chromosome 2, complete
              sequence
          Length = 206168

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 170    gcaacatgttgtttgtcaaaaccaa 194
              ||||||||||||| |||||||||||
Sbjct: 184449 gcaacatgttgttggtcaaaaccaa 184425



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>gb|AC154031.1| Drosophila melanogaster clone CH223-18M04, complete sequence
          Length = 36227

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 170   gcaacatgttgtttgtcaaa 189
             ||||||||||||||||||||
Sbjct: 33127 gcaacatgttgtttgtcaaa 33108



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>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence
          Length = 3587082

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 486     cgtcgtcgaaggacggcggcacgc 509
               |||||| |||||||||||||||||
Sbjct: 1991066 cgtcgttgaaggacggcggcacgc 1991089



 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 498    acggcggcacgcggatggag 517
              ||||||||||||||||||||
Sbjct: 231288 acggcggcacgcggatggag 231307



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>gb|AC078977.6| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0496H07,
              complete sequence
          Length = 164477

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 42     tgcaaaatcatgcaagagac 61
              ||||||||||||||||||||
Sbjct: 101121 tgcaaaatcatgcaagagac 101140



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>gb|CP000068.1| Trypanosoma brucei chromosome 5, complete sequence
          Length = 1608198

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 153    ccacggtggccattagagcaacat 176
              ||||||| ||||||||||||||||
Sbjct: 410876 ccacggttgccattagagcaacat 410853



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>gb|AC159443.1| Trypanosoma brucei chromosome 5 clone RPCI93-30H13, complete sequence
          Length = 152941

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 153   ccacggtggccattagagcaacat 176
             ||||||| ||||||||||||||||
Sbjct: 27427 ccacggttgccattagagcaacat 27404



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>gb|AY091599.1| Infectious salmon anemia virus isolate RPC/NB 980280-2
           nucleoprotein mRNA, complete cds
          Length = 1851

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 113 tctggagcagtggcagcagc 132
           ||||||||||||||||||||
Sbjct: 250 tctggagcagtggcagcagc 269



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>gb|AC072052.6| Homo sapiens BAC clone CTD-2195F21 from 7, complete sequence
          Length = 137074

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 96    ctgtctcccacctcgtctct 115
             ||||||||||||||||||||
Sbjct: 86705 ctgtctcccacctcgtctct 86724



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>gb|AC115290.5| Mus musculus BAC clone RP23-65M10 from chromosome 10, complete sequence
          Length = 245623

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 86     gtcactccatctgtctccca 105
              ||||||||||||||||||||
Sbjct: 125826 gtcactccatctgtctccca 125845



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>gb|AY118142.1| Uncultured Desulfobacterium sp. clone OR-M2 16S ribosomal RNA gene,
           partial sequence
          Length = 400

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 296 tcctttagagtgcccaactc 315
           ||||||||||||||||||||
Sbjct: 34  tcctttagagtgcccaactc 15



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>gb|AY167025.1| Schistosoma haematobium acetylcholinesterase gene, complete cds
          Length = 23383

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 190   accaaattcatagaagtaat 209
             ||||||||||||||||||||
Sbjct: 20790 accaaattcatagaagtaat 20771



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>emb|AL607106.10| Human DNA sequence from clone RP11-207N22 on chromosome 1 Contains part
             of the CSMD2 gene for CUB and Sushi multiple domains 2,
             complete sequence
          Length = 36777

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 255   agtatatttttgcactgcca 274
             ||||||||||||||||||||
Sbjct: 24031 agtatatttttgcactgcca 24050



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>gb|AC093574.3| Homo sapiens chromosome 3 clone RP11-178K11, complete sequence
          Length = 151993

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 197   tcatagaagtaatacatcct 216
             ||||||||||||||||||||
Sbjct: 79030 tcatagaagtaatacatcct 79049



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>gb|AC165064.2| Phakopsora pachyrhizi clone JGIAFNA-2193J23, complete sequence
          Length = 41077

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 34    ttctgttttgcaaaatcatg 53
             ||||||||||||||||||||
Sbjct: 11250 ttctgttttgcaaaatcatg 11269



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>gb|AC090204.11| Homo sapiens chromosome 8, clone RP11-11N9, complete sequence
          Length = 173191

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 339  atgtgatcttgagctgattg 358
            ||||||||||||||||||||
Sbjct: 7147 atgtgatcttgagctgattg 7128



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>gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome
          Length = 2932766

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 112     ctctggagcagtggcagcag 131
               ||||||||||||||||||||
Sbjct: 2515177 ctctggagcagtggcagcag 2515196



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>gb|AC113195.8| Homo sapiens chromosome 18, clone RP11-1112K22, complete sequence
          Length = 162760

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 2      taatatataatgataatagt 21
              ||||||||||||||||||||
Sbjct: 144097 taatatataatgataatagt 144116



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>gb|AC113209.4| Homo sapiens chromosome 8, clone RP11-1002K11, complete sequence
          Length = 193991

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 339   atgtgatcttgagctgattg 358
             ||||||||||||||||||||
Sbjct: 46666 atgtgatcttgagctgattg 46685



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>gb|AC087534.8| Homo sapiens chromosome 18, clone RP11-716B20, complete sequence
          Length = 176966

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 2      taatatataatgataatagt 21
              ||||||||||||||||||||
Sbjct: 139099 taatatataatgataatagt 139080



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>ref|XM_940588.1| PREDICTED: Homo sapiens similar to CG11064-PA (LOC654187), mRNA
          Length = 3570

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 113  tctggagcagtggcagcagc 132
            ||||||||||||||||||||
Sbjct: 1654 tctggagcagtggcagcagc 1635



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>gb|AF306549.1|AF306549 Infectious salmon anemia virus putative nucleoprotein mRNA,
           complete cds
          Length = 2042

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 113 tctggagcagtggcagcagc 132
           ||||||||||||||||||||
Sbjct: 309 tctggagcagtggcagcagc 328



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>gb|AC012087.10|AC012087 Homo sapiens 3 BAC RP11-317L10,RP11-150K6,RP11-68D12 (Roswell Park
             Cancer Institute Human BAC Library) complete sequence
          Length = 194635

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 197   tcatagaagtaatacatcct 216
             ||||||||||||||||||||
Sbjct: 11901 tcatagaagtaatacatcct 11882



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>gb|AE003846.5| Drosophila melanogaster chromosome 4, section 5 of 5 of the complete
              sequence
          Length = 356494

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 170    gcaacatgttgtttgtcaaa 189
              ||||||||||||||||||||
Sbjct: 292666 gcaacatgttgtttgtcaaa 292647



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>gb|AC122767.16| Mus musculus chromosome 7, clone RP24-143L4, complete sequence
          Length = 192484

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 251    gctgagtatatttttgcact 270
              ||||||||||||||||||||
Sbjct: 170096 gctgagtatatttttgcact 170077



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>gb|AC136741.24| Mus musculus chromosome 7, clone RP23-172P1, complete sequence
          Length = 211802

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 251    gctgagtatatttttgcact 270
              ||||||||||||||||||||
Sbjct: 160680 gctgagtatatttttgcact 160699


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,778,712
Number of Sequences: 3902068
Number of extensions: 4778712
Number of successful extensions: 128826
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 128609
Number of HSP's gapped (non-prelim): 214
length of query: 619
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 596
effective length of database: 17,143,297,704
effective search space: 10217405431584
effective search space used: 10217405431584
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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