Clone Name | rbasd3a05 |
---|---|
Clone Library Name | barley_pub |
>GPH2_PSEAE (Q9HZ62) Phosphoglycolate phosphatase 2 (EC 3.1.3.18) (PGPase2)| (PGP 2) Length = 226 Score = 31.2 bits (69), Expect = 2.0 Identities = 14/30 (46%), Positives = 20/30 (66%) Frame = -2 Query: 527 GTNPRRTLFLDDNERNIASGKALGLRTALV 438 G +P R LF+ D+ R+I SG+ G +TA V Sbjct: 160 GIDPSRVLFIGDDLRDIESGRDAGTKTAAV 189
>YIHX_SHIFL (P0A8Y4) Phosphatase yihX (EC 3.1.3.-)| Length = 199 Score = 30.4 bits (67), Expect = 3.4 Identities = 14/34 (41%), Positives = 19/34 (55%) Frame = -2 Query: 539 LRVAGTNPRRTLFLDDNERNIASGKALGLRTALV 438 L+ G +P T+F DDN NI LG+ + LV Sbjct: 151 LQAEGFSPSDTVFFDDNADNIEGANQLGITSILV 184
>YIHX_ECOLI (P0A8Y3) Phosphatase yihX (EC 3.1.3.-)| Length = 199 Score = 30.4 bits (67), Expect = 3.4 Identities = 14/34 (41%), Positives = 19/34 (55%) Frame = -2 Query: 539 LRVAGTNPRRTLFLDDNERNIASGKALGLRTALV 438 L+ G +P T+F DDN NI LG+ + LV Sbjct: 151 LQAEGFSPSDTVFFDDNADNIEGANQLGITSILV 184
>GLMU_STRSZ (Q8GQP7) Bifunctional protein glmU [Includes:| UDP-N-acetylglucosamine pyrophosphorylase (EC 2.7.7.23) (N-acetylglucosamine-1-phosphate uridyltransferase); Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157)] Length = 460 Score = 30.0 bits (66), Expect = 4.5 Identities = 20/54 (37%), Positives = 28/54 (51%) Frame = +3 Query: 141 RLITTSYIQEGSLISDAALWTGSV*IGAGHDQSVGRSCLDGRGLDDGVQLGPHA 302 R+ + S I GS I D+ L G V V +S ++G L DGV +GP+A Sbjct: 285 RIGSRSVITNGSYILDSRLGEGVV---------VSQSVIEGSVLADGVTVGPYA 329
>GPH_AQUAE (O67359) Phosphoglycolate phosphatase (EC 3.1.3.18) (PGPase) (PGP)| Length = 213 Score = 29.6 bits (65), Expect = 5.9 Identities = 12/33 (36%), Positives = 19/33 (57%) Frame = -2 Query: 539 LRVAGTNPRRTLFLDDNERNIASGKALGLRTAL 441 L + G P + L + D + +I +GK G +TAL Sbjct: 147 LEILGEEPEKALIVGDTDADIEAGKRAGTKTAL 179
>GLMU_ANASP (Q8YQB2) Bifunctional protein glmU [Includes:| UDP-N-acetylglucosamine pyrophosphorylase (EC 2.7.7.23) (N-acetylglucosamine-1-phosphate uridyltransferase); Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157)] Length = 451 Score = 29.3 bits (64), Expect = 7.7 Identities = 24/77 (31%), Positives = 36/77 (46%) Frame = +3 Query: 117 IIKHQDSIRLITTSYIQEGSLISDAALWTGSV*IGAGHDQSVGRSCLDGRGLDDGVQLGP 296 II+ Q +R T IQ GS I +L S G + +V S + + DG ++GP Sbjct: 269 IIEPQTHLRGSTV--IQSGSRIGPGSLIENSQ---LGANVTVHYSVVTDSTIQDGTKIGP 323 Query: 297 HALVPLHVVVGLQLAVG 347 +A + H VG +G Sbjct: 324 YAHLRGHAQVGANCRIG 340
>GCR_XENLA (P49844) Glucocorticoid receptor (GR)| Length = 776 Score = 28.9 bits (63), Expect = 10.0 Identities = 21/71 (29%), Positives = 31/71 (43%) Frame = +3 Query: 336 LAVGRAAPDLRDGSPEAADGLQRVVRLLAPRPLANQGCAEAESFSRRDVPLVVVEEERST 515 L+ G L DG+ D + ++ A RP++ Q E E + P VV EE+ Sbjct: 242 LSEGSKTLSLEDGTQRLGDHAKDMLLPSADRPIS-QVKTEKEDYIELCTPGVVNEEKFGP 300 Query: 516 WVCAGDAQGGG 548 C G+ G G Sbjct: 301 VYCVGNFSGSG 311 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 71,116,595 Number of Sequences: 219361 Number of extensions: 1333118 Number of successful extensions: 6147 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 4956 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6144 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4430660157 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)