Clone Name | rbasd2l03 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | RAB36_HUMAN (O95755) Ras-related protein Rab-36 | 30 | 1.9 | 2 | LRC47_HUMAN (Q8N1G4) Leucine-rich repeat-containing protein 47 | 28 | 9.4 | 3 | LRC47_MOUSE (Q505F5) Leucine-rich repeat-containing protein 47 | 28 | 9.4 |
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>RAB36_HUMAN (O95755) Ras-related protein Rab-36| Length = 333 Score = 30.4 bits (67), Expect = 1.9 Identities = 14/27 (51%), Positives = 17/27 (62%) Frame = -1 Query: 135 SWTLGRVGRSASRRAPTYSTLRPASRS 55 SW LGR S ++ PT ST+R A RS Sbjct: 7 SWMLGRAAASPTQTPPTTSTIRVARRS 33
>LRC47_HUMAN (Q8N1G4) Leucine-rich repeat-containing protein 47| Length = 583 Score = 28.1 bits (61), Expect = 9.4 Identities = 12/16 (75%), Positives = 13/16 (81%) Frame = +1 Query: 298 HYLPVSGLGNLRACGP 345 HYL VSG G+LRA GP Sbjct: 53 HYLEVSGCGSLRAPGP 68
>LRC47_MOUSE (Q505F5) Leucine-rich repeat-containing protein 47| Length = 581 Score = 28.1 bits (61), Expect = 9.4 Identities = 12/16 (75%), Positives = 13/16 (81%) Frame = +1 Query: 298 HYLPVSGLGNLRACGP 345 HYL VSG G+LRA GP Sbjct: 55 HYLEVSGCGSLRAPGP 70 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 58,460,320 Number of Sequences: 219361 Number of extensions: 1103943 Number of successful extensions: 2597 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 2536 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2597 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2453576370 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)