ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd2l01
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ref|XM_463324.1| Oryza sativa (japonica cultivar-group), predic... 391 e-105
2dbj|AK111947.1| Oryza sativa (japonica cultivar-group) cDNA clon... 391 e-105
3dbj|AK111703.1| Oryza sativa (japonica cultivar-group) cDNA clon... 391 e-105
4dbj|AK111702.1| Oryza sativa (japonica cultivar-group) cDNA clon... 165 2e-37
5ref|XM_476026.1| Oryza sativa (japonica cultivar-group), predic... 159 1e-35
6dbj|AK111994.1| Oryza sativa (japonica cultivar-group) cDNA clon... 159 1e-35
7dbj|AK111911.1| Oryza sativa (japonica cultivar-group) cDNA clon... 155 2e-34
8dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 147 5e-32
9dbj|AP003334.4| Oryza sativa (japonica cultivar-group) genomic D... 147 5e-32
10gb|AY103921.1| Zea mays PCO126557 mRNA sequence 115 2e-22
11gb|BT019119.1| Zea mays clone Contig731.F mRNA sequence 96 2e-16
12gb|AC130728.2| Oryza sativa (japonica cultivar-group) chromosome... 96 2e-16
13gb|AC130727.1| Oryza sativa (japonica cultivar-group) chromosome... 96 2e-16
14dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 96 2e-16
15gb|AC136217.4| Oryza sativa (japonica cultivar-group) chromosome... 90 1e-14
16dbj|AP006408.1| Lotus japonicus genomic DNA, chromosome 4, clone... 72 2e-09
17gb|AC144473.8| Medicago truncatula clone mth2-15l5, complete seq... 58 4e-05
18gb|DQ196179.1|DQ196179S1 Triticum monococcum cultivar DV92 putat... 56 1e-04
19gb|AC137554.15| Medicago truncatula clone mth2-17j18, complete s... 54 6e-04
20gb|AC136955.20| Medicago truncatula clone mth2-10p1, complete se... 54 6e-04
21ref|NM_191682.1| Oryza sativa (japonica cultivar-group), predic... 50 0.009
22gb|BT014491.1| Lycopersicon esculentum clone 133852F, mRNA sequence 50 0.009
23dbj|AP003273.3| Oryza sativa (japonica cultivar-group) genomic D... 50 0.009
24gb|AF180356.1|AF180356 Brassica oleracea isolate B265 EIF4A prot... 50 0.009
25gb|BT017235.1| Zea mays clone EL01N0304F03.c mRNA sequence 48 0.035
26gb|AY109168.1| Zea mays PCO138828 mRNA sequence 48 0.035
27ref|XM_468332.1| Oryza sativa (japonica cultivar-group), mRNA 46 0.14
28gb|AY223158.1| Schistosoma japonicum clone ZZD1529 mRNA sequence 46 0.14
29dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.14
30dbj|AP004081.3| Oryza sativa (japonica cultivar-group) genomic D... 46 0.14
31dbj|AK111554.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.14
32ref|NM_100274.2| Arabidopsis thaliana ADK1 (DUAL SPECIFICITY KIN... 44 0.55
33gb|AY943848.1| Arabidopsis thaliana casein kinase 1-like protein... 44 0.55
34gb|AY943847.1| Arabidopsis thaliana casein kinase 1-like protein... 44 0.55
35gb|AC182655.2| Populus trichocarpa clone Pop1-121O5, complete se... 44 0.55
36gb|AY096519.1| Arabidopsis thaliana putative protein kinase ADK1... 44 0.55
37gb|AY065409.1| Arabidopsis thaliana putative protein kinase ADK1... 44 0.55
38gb|AY101520.1| Arabidopsis thaliana At1g03930/F21M11_14 mRNA, co... 44 0.55
39gb|AY075642.1| Arabidopsis thaliana At1g03930/F21M11_14 mRNA, co... 44 0.55
40gb|U48779.1|ATU48779 Arabidopsis thaliana dual specificity kinas... 44 0.55
41gb|AC003027.1| Arabidopsis thaliana chromosome I BAC F21M11 geno... 44 0.55
42ref|NM_105930.2| Arabidopsis thaliana ATP binding / casein kinas... 42 2.2
43ref|XM_473169.1| Oryza sativa (japonica cultivar-group), predic... 42 2.2
44gb|AY943843.1| Arabidopsis thaliana casein kinase 1-like protein... 42 2.2
45gb|AC147570.3| Homo sapiens BAC clone RP11-1176F21 from UL, comp... 42 2.2
46gb|AC105457.1| Homo sapiens chromosome 21 clone RP11-271G11 map ... 42 2.2
47gb|BT010328.1| Arabidopsis thaliana At1g72710 mRNA, complete cds 42 2.2
48emb|AL606659.3|OSJN00108 Oryza sativa genomic DNA, chromosome 4,... 42 2.2
49gb|AY059850.1| Arabidopsis thaliana putative casein kinase I (At... 42 2.2
50gb|AC010926.12|AC010926 Arabidopsis thaliana chromosome 1 BAC F2... 42 2.2
51dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.2
52dbj|AK111987.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.2
53emb|AL163204.2|HS21C004 Homo sapiens chromosome 21 segment HS21C004 42 2.2
54emb|AL731630.2|OSJN00273 Oryza sativa genomic DNA, chromosome 4,... 42 2.2
55dbj|AP001466.1| Homo sapiens genomic DNA, chromosome 21q11.1, cl... 42 2.2
56gb|AC159998.6| Mus musculus BAC clone RP24-576J22 from chromosom... 40 8.6
57gb|CP000068.1| Trypanosoma brucei chromosome 5, complete sequence 40 8.6
58gb|AC159441.1| Trypanosoma brucei chromosome 5 clone RPCI93-30F7... 40 8.6
59gb|AC159432.1| Trypanosoma brucei chromosome 5 clone RPCI93-28F8... 40 8.6
60gb|AC123549.5| Mus musculus BAC clone RP24-91K17 from chromosome... 40 8.6
61gb|AC004417.1| Homo sapiens BAC clone CTA-325M7 from 7, complete... 40 8.6
62gb|AC080144.11| Mus musculus chromosome 6, clone RP23-237K24, co... 40 8.6
63ref|XM_819307.1| Trypanosoma brucei TREU927 clone RPCI93-28F8 ca... 40 8.6
64ref|XM_819306.1| Trypanosoma brucei TREU927 clone RPCI93-28F8 ca... 40 8.6
65gb|AC117275.3| Mus musculus BAC clone RP23-383F11 from chromosom... 40 8.6
66emb|AL024505.1|HS112L6 Human DNA sequence from clone RP1-112L6 o... 40 8.6
67ref|NM_001031290.1| Gallus gallus similar to Ubiquitin carboxyl-... 40 8.6
68gb|AC163436.3| Mus musculus chromosome 1, clone RP23-102H12, com... 40 8.6
69emb|AJ720494.1| Gallus gallus mRNA for hypothetical protein, clo... 40 8.6
70gb|AC024599.9| Homo sapiens chromosome 10 clone RP11-159H3, comp... 40 8.6
71gb|AC004077.3| Arabidopsis thaliana chromosome 2 clone T31E10 ma... 40 8.6
72gb|AC132415.4| Mus musculus BAC clone RP23-246C16 from chromosom... 40 8.6
73gb|AC021863.5|AC021863 Homo sapiens BAC clone RP11-689K5 from 4,... 40 8.6
74gb|AC153384.4| Mus musculus 6 BAC RP23-388D3 (Roswell Park Cance... 40 8.6
75gb|AC145987.2| Pan troglodytes BAC clone RP43-165D6 from chromos... 40 8.6
76gb|AF180355.1|AF180355 Brassica oleracea isolate B265 ABI1 prote... 40 8.6
77gb|AC099744.3| Papio anubis clone RP41-65E12, complete sequence 40 8.6
78ref|NM_031739.1| Rattus norvegicus potassium voltage gated chann... 40 8.6
79gb|AC102900.12| Mus musculus chromosome 1, clone RP24-315J13, co... 40 8.6
80gb|U42975.1|RNU42975 Rattus norvegicus Shal-related potassium ch... 40 8.6
81gb|AC109203.9| Mus musculus chromosome 18, clone RP23-2B18, comp... 40 8.6
82gb|AF044032.1|AF044032 Arabidopsis thaliana glutathione S-conjug... 40 8.6
83gb|AC147717.1| Gallus gallus BAC clone CH261-5M18 from chromosom... 40 8.6
84gb|L48619.1|RATKV43R Rattus norvegicus voltage-gated K+ channel ... 40 8.6

>ref|XM_463324.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1506

 Score =  391 bits (197), Expect = e-105
 Identities = 413/485 (85%)
 Strand = Plus / Minus

                                                                        
Query: 148  tgcctggggtcagagtagtcaagcgtgtgtgaggccctccgtggagctgagtttctctgg 207
            |||||||||||||| ||||| ||| | ||||||  ||| |||||||  |   |||| |||
Sbjct: 1406 tgcctggggtcagaatagtcgagcatctgtgagctcctacgtggaggagcacttctttgg 1347

                                                                        
Query: 208  aatgtccctggactcacatctggtgcacgactacgcgatggttcagcttcactgcttggc 267
            |||||||| |||||  |||||||||  || ||||| |||||||||||||| |||||| ||
Sbjct: 1346 aatgtcccaggacttgcatctggtgtgcggctacgtgatggttcagcttcgctgctttgc 1287

                                                                        
Query: 268  aaatctcggctactagaaacagcaggtcgccttgagaacacgcctgaccgacccaaaaaa 327
            |  |||||||||||||||||| ||||||||||| || |  ||| |||||||||||| |  
Sbjct: 1286 agttctcggctactagaaacaacaggtcgccttaaggatccgcttgaccgacccaacatt 1227

                                                                        
Query: 328  gtcgaactggacaacacagcttccttcggtgcggacagatctggtctgactggtgacttc 387
            |||||||| || |||| ||| || || |  | |||||  ||||| || || || ||||||
Sbjct: 1226 gtcgaactagagaacaaagcatcttttgaagtggacatgtctggcctaaccggggacttc 1167

                                                                        
Query: 388  tgtttcgataagctgcctgcatttattcctgtaggtggaacctgacttcgtgtaggatca 447
            ||||| ||||||||||| |||||||||||||||||||||||||||| |||||||||||||
Sbjct: 1166 tgttttgataagctgccagcatttattcctgtaggtggaacctgacgtcgtgtaggatca 1107

                                                                        
Query: 448  gctgaccacccacttattcttccttcttcagtggctgacagtctattattacttgcaatg 507
             |||||||||| ||| ||||||| |||||||||||||| || ||||||||| |||| || 
Sbjct: 1106 tctgaccacccgcttcttcttccctcttcagtggctgatagcctattattatttgctatt 1047

                                                                        
Query: 508  ggagccatccccgagctttgtcctgcagcggcggcaatagcgcgtggtggaacactggtc 567
            |||| ||| || |||||||| ||||| || || |||||||| ||||||||||||||||| 
Sbjct: 1046 ggagacattccagagctttgccctgctgctgcagcaatagcacgtggtggaacactggtt 987

                                                                        
Query: 568  atttgtgactgctggtacttaagaatggtccagtcaaaaacataatcaaactggaatccc 627
            || |||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||
Sbjct: 986  atctgtgactgctggtacttaagaatggtccagtcaaaaacgtaatcaaactgaaatccc 927

                 
Query: 628  tctcg 632
            |||||
Sbjct: 926  tctcg 922



 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 53/57 (92%)
 Strand = Plus / Minus

                                                                     
Query: 75   cctatcattggcatcgaaatttaggccttggatgccccttatagtggactcgtagtt 131
            |||||| |||||||| |||||||||||||||||||| |||||||||||||| |||||
Sbjct: 1494 cctatcgttggcatcaaaatttaggccttggatgcctcttatagtggactcatagtt 1438



to top

>dbj|AK111947.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-E09, full
           insert sequence
          Length = 1340

 Score =  391 bits (197), Expect = e-105
 Identities = 413/485 (85%)
 Strand = Plus / Minus

                                                                       
Query: 148 tgcctggggtcagagtagtcaagcgtgtgtgaggccctccgtggagctgagtttctctgg 207
           |||||||||||||| ||||| ||| | ||||||  ||| |||||||  |   |||| |||
Sbjct: 746 tgcctggggtcagaatagtcgagcatctgtgagctcctacgtggaggagcacttctttgg 687

                                                                       
Query: 208 aatgtccctggactcacatctggtgcacgactacgcgatggttcagcttcactgcttggc 267
           |||||||| |||||  |||||||||  || ||||| |||||||||||||| |||||| ||
Sbjct: 686 aatgtcccaggacttgcatctggtgtgcggctacgtgatggttcagcttcgctgctttgc 627

                                                                       
Query: 268 aaatctcggctactagaaacagcaggtcgccttgagaacacgcctgaccgacccaaaaaa 327
           |  |||||||||||||||||| ||||||||||| || |  ||| |||||||||||| |  
Sbjct: 626 agttctcggctactagaaacaacaggtcgccttaaggatccgcttgaccgacccaacatt 567

                                                                       
Query: 328 gtcgaactggacaacacagcttccttcggtgcggacagatctggtctgactggtgacttc 387
           |||||||| || |||| ||| || || |  | |||||  ||||| || || || ||||||
Sbjct: 566 gtcgaactagagaacaaagcatcttttgaagtggacatgtctggcctaaccggggacttc 507

                                                                       
Query: 388 tgtttcgataagctgcctgcatttattcctgtaggtggaacctgacttcgtgtaggatca 447
           ||||| ||||||||||| |||||||||||||||||||||||||||| |||||||||||||
Sbjct: 506 tgttttgataagctgccagcatttattcctgtaggtggaacctgacgtcgtgtaggatca 447

                                                                       
Query: 448 gctgaccacccacttattcttccttcttcagtggctgacagtctattattacttgcaatg 507
            |||||||||| ||| ||||||| |||||||||||||| || ||||||||| |||| || 
Sbjct: 446 tctgaccacccgcttcttcttccctcttcagtggctgatagcctattattatttgctatt 387

                                                                       
Query: 508 ggagccatccccgagctttgtcctgcagcggcggcaatagcgcgtggtggaacactggtc 567
           |||| ||| || |||||||| ||||| || || |||||||| ||||||||||||||||| 
Sbjct: 386 ggagacattccagagctttgccctgctgctgcagcaatagcacgtggtggaacactggtt 327

                                                                       
Query: 568 atttgtgactgctggtacttaagaatggtccagtcaaaaacataatcaaactggaatccc 627
           || |||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||
Sbjct: 326 atctgtgactgctggtacttaagaatggtccagtcaaaaacgtaatcaaactgaaatccc 267

                
Query: 628 tctcg 632
           |||||
Sbjct: 266 tctcg 262



 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 53/57 (92%)
 Strand = Plus / Minus

                                                                    
Query: 75  cctatcattggcatcgaaatttaggccttggatgccccttatagtggactcgtagtt 131
           |||||| |||||||| |||||||||||||||||||| |||||||||||||| |||||
Sbjct: 834 cctatcgttggcatcaaaatttaggccttggatgcctcttatagtggactcatagtt 778



to top

>dbj|AK111703.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023011C07, full
            insert sequence
          Length = 1851

 Score =  391 bits (197), Expect = e-105
 Identities = 413/485 (85%)
 Strand = Plus / Minus

                                                                        
Query: 148  tgcctggggtcagagtagtcaagcgtgtgtgaggccctccgtggagctgagtttctctgg 207
            |||||||||||||| ||||| ||| | ||||||  ||| |||||||  |   |||| |||
Sbjct: 1596 tgcctggggtcagaatagtcgagcatctgtgagctcctacgtggaggagcacttctttgg 1537

                                                                        
Query: 208  aatgtccctggactcacatctggtgcacgactacgcgatggttcagcttcactgcttggc 267
            |||||||| |||||  |||||||||  || ||||| |||||||||||||| |||||| ||
Sbjct: 1536 aatgtcccaggacttgcatctggtgtgcggctacgtgatggttcagcttcgctgctttgc 1477

                                                                        
Query: 268  aaatctcggctactagaaacagcaggtcgccttgagaacacgcctgaccgacccaaaaaa 327
            |  |||||||||||||||||| ||||||||||| || |  ||| |||||||||||| |  
Sbjct: 1476 agttctcggctactagaaacaacaggtcgccttaaggatccgcttgaccgacccaacatt 1417

                                                                        
Query: 328  gtcgaactggacaacacagcttccttcggtgcggacagatctggtctgactggtgacttc 387
            |||||||| || |||| ||| || || |  | |||||  ||||| || || || ||||||
Sbjct: 1416 gtcgaactagagaacaaagcatcttttgaagtggacatgtctggcctaaccggggacttc 1357

                                                                        
Query: 388  tgtttcgataagctgcctgcatttattcctgtaggtggaacctgacttcgtgtaggatca 447
            ||||| ||||||||||| |||||||||||||||||||||||||||| |||||||||||||
Sbjct: 1356 tgttttgataagctgccagcatttattcctgtaggtggaacctgacgtcgtgtaggatca 1297

                                                                        
Query: 448  gctgaccacccacttattcttccttcttcagtggctgacagtctattattacttgcaatg 507
             |||||||||| ||| ||||||| |||||||||||||| || ||||||||| |||| || 
Sbjct: 1296 tctgaccacccgcttcttcttccctcttcagtggctgatagcctattattatttgctatt 1237

                                                                        
Query: 508  ggagccatccccgagctttgtcctgcagcggcggcaatagcgcgtggtggaacactggtc 567
            |||| ||| || |||||||| ||||| || || |||||||| ||||||||||||||||| 
Sbjct: 1236 ggagacattccagagctttgccctgctgctgcagcaatagcacgtggtggaacactggtt 1177

                                                                        
Query: 568  atttgtgactgctggtacttaagaatggtccagtcaaaaacataatcaaactggaatccc 627
            || |||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||
Sbjct: 1176 atctgtgactgctggtacttaagaatggtccagtcaaaaacgtaatcaaactgaaatccc 1117

                 
Query: 628  tctcg 632
            |||||
Sbjct: 1116 tctcg 1112



 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 53/57 (92%)
 Strand = Plus / Minus

                                                                     
Query: 75   cctatcattggcatcgaaatttaggccttggatgccccttatagtggactcgtagtt 131
            |||||| |||||||| |||||||||||||||||||| |||||||||||||| |||||
Sbjct: 1684 cctatcgttggcatcaaaatttaggccttggatgcctcttatagtggactcatagtt 1628



to top

>dbj|AK111702.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023013G21, full
            insert sequence
          Length = 2953

 Score =  165 bits (83), Expect = 2e-37
 Identities = 128/143 (89%)
 Strand = Plus / Minus

                                                                        
Query: 490  ctattattacttgcaatgggagccatccccgagctttgtcctgcagcggcggcaatagcg 549
            ||||||||| |||| || |||| ||| || |||||||| ||||| || || |||||||| 
Sbjct: 1370 ctattattatttgctattggagacattccagagctttgccctgctgctgcagcaatagca 1311

                                                                        
Query: 550  cgtggtggaacactggtcatttgtgactgctggtacttaagaatggtccagtcaaaaaca 609
            ||||||||||||||||| || |||||||||||||||||||||||||||||||||||||| 
Sbjct: 1310 cgtggtggaacactggttatctgtgactgctggtacttaagaatggtccagtcaaaaacg 1251

                                   
Query: 610  taatcaaactggaatccctctcg 632
            ||||||||||| |||||||||||
Sbjct: 1250 taatcaaactgaaatccctctcg 1228



 Score =  147 bits (74), Expect = 5e-32
 Identities = 95/102 (93%)
 Strand = Plus / Minus

                                                                        
Query: 382  gacttctgtttcgataagctgcctgcatttattcctgtaggtggaacctgacttcgtgta 441
            ||||||||||| ||||||||||| |||||||||||||||||||||||||||| |||||||
Sbjct: 2343 gacttctgttttgataagctgccagcatttattcctgtaggtggaacctgacgtcgtgta 2284

                                                      
Query: 442  ggatcagctgaccacccacttattcttccttcttcagtggct 483
            |||||| |||||||||| ||| ||||||| ||||||||||||
Sbjct: 2283 ggatcatctgaccacccgcttcttcttccctcttcagtggct 2242



 Score =  111 bits (56), Expect = 3e-21
 Identities = 146/176 (82%)
 Strand = Plus / Minus

                                                                        
Query: 148  tgcctggggtcagagtagtcaagcgtgtgtgaggccctccgtggagctgagtttctctgg 207
            |||||||||||||| ||||| ||| | ||||||  ||| |||||||  |   |||| |||
Sbjct: 2698 tgcctggggtcagaatagtcgagcatctgtgagctcctacgtggaggagcacttctttgg 2639

                                                                        
Query: 208  aatgtccctggactcacatctggtgcacgactacgcgatggttcagcttcactgcttggc 267
            |||||||| |||||  |||||||||  || ||||| |||||||||||||| |||||| ||
Sbjct: 2638 aatgtcccaggacttgcatctggtgtgcggctacgtgatggttcagcttcgctgctttgc 2579

                                                                    
Query: 268  aaatctcggctactagaaacagcaggtcgccttgagaacacgcctgaccgacccaa 323
            |  |||||||||||||||||| ||||||||||| || |  ||| ||||||||||||
Sbjct: 2578 agttctcggctactagaaacaacaggtcgccttaaggatccgcttgaccgacccaa 2523



 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 53/57 (92%)
 Strand = Plus / Minus

                                                                     
Query: 75   cctatcattggcatcgaaatttaggccttggatgccccttatagtggactcgtagtt 131
            |||||| |||||||| |||||||||||||||||||| |||||||||||||| |||||
Sbjct: 2786 cctatcgttggcatcaaaatttaggccttggatgcctcttatagtggactcatagtt 2730



to top

>ref|XM_476026.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1422

 Score =  159 bits (80), Expect = 1e-35
 Identities = 211/254 (83%), Gaps = 3/254 (1%)
 Strand = Plus / Minus

                                                                        
Query: 382  gacttctgtttcgataagctgcctgcatttattcctgtaggtggaacctgacttcgtgta 441
            |||||||| || | || |||||||||||||||  ||| ||||||||||||||  ||  | 
Sbjct: 1088 gacttctgcttggctaggctgcctgcatttatagctggaggtggaacctgacgccgcatc 1029

                                                                        
Query: 442  ggatc---agctgaccacccacttattcttccttcttcagtggctgacagtctattatta 498
            | |||   | ||||||| || ||| | ||||| ||||| ||||||||||| || ||||||
Sbjct: 1028 gcatccatatctgaccagccgcttctccttccctcttcggtggctgacagcctgttatta 969

                                                                        
Query: 499  cttgcaatgggagccatccccgagctttgtcctgcagcggcggcaatagcgcgtggtgga 558
             |||| || ||||||||| |||||||||||||||  || | |||||| || |||||||||
Sbjct: 968  tttgctataggagccatcgccgagctttgtcctgttgcaggggcaatggcacgtggtgga 909

                                                                        
Query: 559  acactggtcatttgtgactgctggtacttaagaatggtccagtcaaaaacataatcaaac 618
             |||||||||| |||||||| || ||||| || || ||||||||||||||||||||||||
Sbjct: 908  gcactggtcatctgtgactgttgatacttcaggattgtccagtcaaaaacataatcaaac 849

                          
Query: 619  tggaatccctctcg 632
            || |||||||||||
Sbjct: 848  tgaaatccctctcg 835



 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 118/140 (84%), Gaps = 3/140 (2%)
 Strand = Plus / Minus

                                                                        
Query: 205  tggaatgtccctggactcacatctggtgcacgactacgcgatggttcagcttcactgctt 264
            ||||||| ||| |||||  |||||| || ||||||||| ||  | ||||||||| |||||
Sbjct: 1262 tggaatgcccccggacttgcatctgttgtacgactacgtgactggtcagcttcagtgctt 1203

                                                                        
Query: 265  ggcaaatctcggctactagaaacagcaggtcgccttgagaacacgcctgaccgacccaaa 324
            ||    |||||||||||||| |||||||||||||||||| |  ||| |||||| ||||||
Sbjct: 1202 ggt---tctcggctactagagacagcaggtcgccttgaggatccgcttgaccgtcccaaa 1146

                                
Query: 325  aaagtcgaactggacaacac 344
            |||||||||||||| |||||
Sbjct: 1145 aaagtcgaactggagaacac 1126



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 51/57 (89%)
 Strand = Plus / Minus

                                                                     
Query: 75   cctatcattggcatcgaaatttaggccttggatgccccttatagtggactcgtagtt 131
            |||||||| | |||||||||||||||| |||||||||| ||| || |||||||||||
Sbjct: 1410 cctatcatcgccatcgaaatttaggccctggatgccccgtatggtcgactcgtagtt 1354



to top

>dbj|AK111994.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-033-D10, full
            insert sequence
          Length = 2161

 Score =  159 bits (80), Expect = 1e-35
 Identities = 211/254 (83%), Gaps = 3/254 (1%)
 Strand = Plus / Minus

                                                                        
Query: 382  gacttctgtttcgataagctgcctgcatttattcctgtaggtggaacctgacttcgtgta 441
            |||||||| || | || |||||||||||||||  ||| ||||||||||||||  ||  | 
Sbjct: 1273 gacttctgcttggctaggctgcctgcatttatagctggaggtggaacctgacgccgcatc 1214

                                                                        
Query: 442  ggatc---agctgaccacccacttattcttccttcttcagtggctgacagtctattatta 498
            | |||   | ||||||| || ||| | ||||| ||||| ||||||||||| || ||||||
Sbjct: 1213 gcatccatatctgaccagccgcttctccttccctcttcggtggctgacagcctgttatta 1154

                                                                        
Query: 499  cttgcaatgggagccatccccgagctttgtcctgcagcggcggcaatagcgcgtggtgga 558
             |||| || ||||||||| |||||||||||||||  || | |||||| || |||||||||
Sbjct: 1153 tttgctataggagccatcgccgagctttgtcctgttgcaggggcaatggcacgtggtgga 1094

                                                                        
Query: 559  acactggtcatttgtgactgctggtacttaagaatggtccagtcaaaaacataatcaaac 618
             |||||||||| |||||||| || ||||| || || ||||||||||||||||||||||||
Sbjct: 1093 gcactggtcatctgtgactgttgatacttcaggattgtccagtcaaaaacataatcaaac 1034

                          
Query: 619  tggaatccctctcg 632
            || |||||||||||
Sbjct: 1033 tgaaatccctctcg 1020



 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 118/140 (84%), Gaps = 3/140 (2%)
 Strand = Plus / Minus

                                                                        
Query: 205  tggaatgtccctggactcacatctggtgcacgactacgcgatggttcagcttcactgctt 264
            ||||||| ||| |||||  |||||| || ||||||||| ||  | ||||||||| |||||
Sbjct: 1447 tggaatgcccccggacttgcatctgttgtacgactacgtgactggtcagcttcagtgctt 1388

                                                                        
Query: 265  ggcaaatctcggctactagaaacagcaggtcgccttgagaacacgcctgaccgacccaaa 324
            ||    |||||||||||||| |||||||| ||||||||| || ||| |||||| ||||||
Sbjct: 1387 ggt---tctcggctactagagacagcaggccgccttgaggacccgcttgaccgtcccaaa 1331

                                
Query: 325  aaagtcgaactggacaacac 344
            |||||||||||||| |||||
Sbjct: 1330 aaagtcgaactggagaacac 1311



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 51/57 (89%)
 Strand = Plus / Minus

                                                                     
Query: 75   cctatcattggcatcgaaatttaggccttggatgccccttatagtggactcgtagtt 131
            |||||||| | |||||||||||||||| |||||||||| ||| || |||||||||||
Sbjct: 1595 cctatcatcgccatcgaaatttaggccctggatgccccgtatggtcgactcgtagtt 1539



to top

>dbj|AK111911.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033124M05, full
            insert sequence
          Length = 2164

 Score =  155 bits (78), Expect = 2e-34
 Identities = 209/252 (82%), Gaps = 3/252 (1%)
 Strand = Plus / Minus

                                                                        
Query: 382  gacttctgtttcgataagctgcctgcatttattcctgtaggtggaacctgacttcgtgta 441
            |||||||| || | || |||||||||||||||  ||| ||||||||||||||  ||  | 
Sbjct: 1279 gacttctgcttggctaggctgcctgcatttatagctggaggtggaacctgacgccgcatc 1220

                                                                        
Query: 442  ggatc---agctgaccacccacttattcttccttcttcagtggctgacagtctattatta 498
            | |||   | ||||||| || ||| | ||||| ||||| ||||||||||| || ||||||
Sbjct: 1219 gcatccatatctgaccagccgcttctccttccctcttcggtggctgacagcctgttatta 1160

                                                                        
Query: 499  cttgcaatgggagccatccccgagctttgtcctgcagcggcggcaatagcgcgtggtgga 558
             |||| || ||||||||| |||||||||||||||  || | |||||| || |||||||||
Sbjct: 1159 tttgctataggagccatcgccgagctttgtcctgttgcaggggcaatggcacgtggtgga 1100

                                                                        
Query: 559  acactggtcatttgtgactgctggtacttaagaatggtccagtcaaaaacataatcaaac 618
             |||||||||| |||||||| || ||||| || || ||||||||||||||||||||||||
Sbjct: 1099 gcactggtcatctgtgactgttgatacttcaggattgtccagtcaaaaacataatcaaac 1040

                        
Query: 619  tggaatccctct 630
            || |||||||||
Sbjct: 1039 tgaaatccctct 1028



 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 118/140 (84%), Gaps = 3/140 (2%)
 Strand = Plus / Minus

                                                                        
Query: 205  tggaatgtccctggactcacatctggtgcacgactacgcgatggttcagcttcactgctt 264
            ||||||| ||| |||||  |||||| || ||||||||| ||  | ||||||||| |||||
Sbjct: 1453 tggaatgcccccggacttgcatctgttgtacgactacgtgactggtcagcttcagtgctt 1394

                                                                        
Query: 265  ggcaaatctcggctactagaaacagcaggtcgccttgagaacacgcctgaccgacccaaa 324
            ||    |||||||||||||| |||||||||||||||||| |  ||| |||||| ||||||
Sbjct: 1393 ggt---tctcggctactagagacagcaggtcgccttgaggatccgcttgaccgtcccaaa 1337

                                
Query: 325  aaagtcgaactggacaacac 344
            |||||||||||||| |||||
Sbjct: 1336 aaagtcgaactggagaacac 1317



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 51/57 (89%)
 Strand = Plus / Minus

                                                                     
Query: 75   cctatcattggcatcgaaatttaggccttggatgccccttatagtggactcgtagtt 131
            |||||||| | |||||||||||||||| |||||||||| ||| || |||||||||||
Sbjct: 1601 cctatcatcgccatcgaaatttaggccctggatgccccgtatggtcgactcgtagtt 1545



to top

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  147 bits (74), Expect = 5e-32
 Identities = 95/102 (93%)
 Strand = Plus / Minus

                                                                            
Query: 382      gacttctgtttcgataagctgcctgcatttattcctgtaggtggaacctgacttcgtgta 441
                ||||||||||| ||||||||||| |||||||||||||||||||||||||||| |||||||
Sbjct: 21879104 gacttctgttttgataagctgccagcatttattcctgtaggtggaacctgacgtcgtgta 21879045

                                                          
Query: 442      ggatcagctgaccacccacttattcttccttcttcagtggct 483
                |||||| |||||||||| ||| ||||||| ||||||||||||
Sbjct: 21879044 ggatcatctgaccacccgcttcttcttccctcttcagtggct 21879003



 Score =  129 bits (65), Expect = 1e-26
 Identities = 80/85 (94%)
 Strand = Plus / Minus

                                                                            
Query: 542      caatagcgcgtggtggaacactggtcatttgtgactgctggtacttaagaatggtccagt 601
                ||||||| ||||||||||||||||| || |||||||||||||||||||||||||||||||
Sbjct: 21877996 caatagcacgtggtggaacactggttatctgtgactgctggtacttaagaatggtccagt 21877937

                                         
Query: 602      caaaaacataatcaaactggaatcc 626
                ||||||| ||||||||||| |||||
Sbjct: 21877936 caaaaacgtaatcaaactgaaatcc 21877912



 Score =  111 bits (56), Expect = 3e-21
 Identities = 146/176 (82%)
 Strand = Plus / Minus

                                                                            
Query: 148      tgcctggggtcagagtagtcaagcgtgtgtgaggccctccgtggagctgagtttctctgg 207
                |||||||||||||| ||||| ||| | ||||||  ||| |||||||  |   |||| |||
Sbjct: 21879459 tgcctggggtcagaatagtcgagcatctgtgagctcctacgtggaggagcacttctttgg 21879400

                                                                            
Query: 208      aatgtccctggactcacatctggtgcacgactacgcgatggttcagcttcactgcttggc 267
                |||||||| |||||  |||||||||  || ||||| |||||||||||||| |||||| ||
Sbjct: 21879399 aatgtcccaggacttgcatctggtgtgcggctacgtgatggttcagcttcgctgctttgc 21879340

                                                                        
Query: 268      aaatctcggctactagaaacagcaggtcgccttgagaacacgcctgaccgacccaa 323
                |  |||||||||||||||||| ||||||||||| || |  ||| ||||||||||||
Sbjct: 21879339 agttctcggctactagaaacaacaggtcgccttaaggatccgcttgaccgacccaa 21879284



 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 53/57 (92%)
 Strand = Plus / Minus

                                                                         
Query: 75       cctatcattggcatcgaaatttaggccttggatgccccttatagtggactcgtagtt 131
                |||||| |||||||| |||||||||||||||||||| |||||||||||||| |||||
Sbjct: 21879547 cctatcgttggcatcaaaatttaggccttggatgcctcttatagtggactcatagtt 21879491



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 46/53 (86%)
 Strand = Plus / Minus

                                                                     
Query: 568      atttgtgactgctggtacttaagaatggtccagtcaaaaacataatcaaactg 620
                ||||| || ||||||||||| || || ||||||||||| ||||| ||||||||
Sbjct: 29428149 atttgagattgctggtacttcagtattgtccagtcaaacacatagtcaaactg 29428097



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                                 
Query: 270      atctcggctactagaaacagcaggtcgccttga 302
                |||||||||||| ||||||||||| | ||||||
Sbjct: 29429055 atctcggctacttgaaacagcaggcctccttga 29429023



to top

>dbj|AP003334.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:B1114B07
          Length = 148060

 Score =  147 bits (74), Expect = 5e-32
 Identities = 95/102 (93%)
 Strand = Plus / Minus

                                                                          
Query: 382    gacttctgtttcgataagctgcctgcatttattcctgtaggtggaacctgacttcgtgta 441
              ||||||||||| ||||||||||| |||||||||||||||||||||||||||| |||||||
Sbjct: 108397 gacttctgttttgataagctgccagcatttattcctgtaggtggaacctgacgtcgtgta 108338

                                                        
Query: 442    ggatcagctgaccacccacttattcttccttcttcagtggct 483
              |||||| |||||||||| ||| ||||||| ||||||||||||
Sbjct: 108337 ggatcatctgaccacccgcttcttcttccctcttcagtggct 108296



 Score =  129 bits (65), Expect = 1e-26
 Identities = 80/85 (94%)
 Strand = Plus / Minus

                                                                          
Query: 542    caatagcgcgtggtggaacactggtcatttgtgactgctggtacttaagaatggtccagt 601
              ||||||| ||||||||||||||||| || |||||||||||||||||||||||||||||||
Sbjct: 107289 caatagcacgtggtggaacactggttatctgtgactgctggtacttaagaatggtccagt 107230

                                       
Query: 602    caaaaacataatcaaactggaatcc 626
              ||||||| ||||||||||| |||||
Sbjct: 107229 caaaaacgtaatcaaactgaaatcc 107205



 Score =  111 bits (56), Expect = 3e-21
 Identities = 146/176 (82%)
 Strand = Plus / Minus

                                                                          
Query: 148    tgcctggggtcagagtagtcaagcgtgtgtgaggccctccgtggagctgagtttctctgg 207
              |||||||||||||| ||||| ||| | ||||||  ||| |||||||  |   |||| |||
Sbjct: 108752 tgcctggggtcagaatagtcgagcatctgtgagctcctacgtggaggagcacttctttgg 108693

                                                                          
Query: 208    aatgtccctggactcacatctggtgcacgactacgcgatggttcagcttcactgcttggc 267
              |||||||| |||||  |||||||||  || ||||| |||||||||||||| |||||| ||
Sbjct: 108692 aatgtcccaggacttgcatctggtgtgcggctacgtgatggttcagcttcgctgctttgc 108633

                                                                      
Query: 268    aaatctcggctactagaaacagcaggtcgccttgagaacacgcctgaccgacccaa 323
              |  |||||||||||||||||| ||||||||||| || |  ||| ||||||||||||
Sbjct: 108632 agttctcggctactagaaacaacaggtcgccttaaggatccgcttgaccgacccaa 108577



 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 53/57 (92%)
 Strand = Plus / Minus

                                                                       
Query: 75     cctatcattggcatcgaaatttaggccttggatgccccttatagtggactcgtagtt 131
              |||||| |||||||| |||||||||||||||||||| |||||||||||||| |||||
Sbjct: 108840 cctatcgttggcatcaaaatttaggccttggatgcctcttatagtggactcatagtt 108784



to top

>gb|AY103921.1| Zea mays PCO126557 mRNA sequence
          Length = 1468

 Score =  115 bits (58), Expect = 2e-22
 Identities = 142/170 (83%)
 Strand = Plus / Minus

                                                                       
Query: 451 gaccacccacttattcttccttcttcagtggctgacagtctattattacttgcaatggga 510
           |||||||| ||| | ||||| ||||||||| ||||  ||||||| ||  |||| |  |||
Sbjct: 607 gaccacccgcttctccttccctcttcagtgcctgaatgtctattgttgtttgccacagga 548

                                                                       
Query: 511 gccatccccgagctttgtcctgcagcggcggcaatagcgcgtggtggaacactggtcatt 570
           |||||||| |||||||||||| | || |  ||||| || || |||||| || ||||||| 
Sbjct: 547 gccatcccagagctttgtcctactgctggagcaattgcacgaggtggagcagtggtcatc 488

                                                             
Query: 571 tgtgactgctggtacttaagaatggtccagtcaaaaacataatcaaactg 620
           |||| ||| |||||||| ||||||||||||||||||||||||||||||||
Sbjct: 487 tgtgcctgttggtactttagaatggtccagtcaaaaacataatcaaactg 438



 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 67/77 (87%)
 Strand = Plus / Minus

                                                                       
Query: 271 tctcggctactagaaacagcaggtcgccttgagaacacgcctgaccgacccaaaaaagtc 330
           |||||||||||||| |||||||| ||||||||  |  ||| ||| || ||||||||||||
Sbjct: 790 tctcggctactagatacagcaggccgccttgacgatccgcttgaacgtcccaaaaaagtc 731

                            
Query: 331 gaactggacaacacagc 347
           |||||||| ||||||||
Sbjct: 730 gaactggagaacacagc 714



to top

>gb|BT019119.1| Zea mays clone Contig731.F mRNA sequence
          Length = 1034

 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 141/172 (81%)
 Strand = Plus / Minus

                                                                       
Query: 449 ctgaccacccacttattcttccttcttcagtggctgacagtctattattacttgcaatgg 508
           |||||||||| ||| | ||||| ||||||||| ||||  ||||||| ||  |||| |  |
Sbjct: 331 ctgaccacccgcttctccttccctcttcagtgcctgaatgtctattgttgtttgccacag 272

                                                                       
Query: 509 gagccatccccgagctttgtcctgcagcggcggcaatagcgcgtggtggaacactggtca 568
           |||||||||| |||||||||||| | || |  ||||| || ||||| ||| |  ||||||
Sbjct: 271 gagccatcccagagctttgtcctactgctggagcaattgcacgtggcggagccgtggtca 212

                                                               
Query: 569 tttgtgactgctggtacttaagaatggtccagtcaaaaacataatcaaactg 620
           | ||||  || |||||||| ||||| ||||||||||||||||||||||||||
Sbjct: 211 tctgtgcatgttggtactttagaattgtccagtcaaaaacataatcaaactg 160



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 66/77 (85%)
 Strand = Plus / Minus

                                                                       
Query: 271 tctcggctactagaaacagcaggtcgccttgagaacacgcctgaccgacccaaaaaagtc 330
           |||||||||||||| |||||||| ||||||||  |  ||| ||| || ||||||| ||||
Sbjct: 512 tctcggctactagagacagcaggccgccttgacgatccgcttgagcgtcccaaaagagtc 453

                            
Query: 331 gaactggacaacacagc 347
           |||||||| ||||||||
Sbjct: 452 gaactggagaacacagc 436



to top

>gb|AC130728.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0663C08,
              complete sequence
          Length = 142196

 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 113/134 (84%), Gaps = 3/134 (2%)
 Strand = Plus / Plus

                                                                          
Query: 205    tggaatgtccctggactcacatctggtgcacgactacgcgatggttcagcttcactgctt 264
              ||||||| ||| |||||  |||||| || ||||||||| ||  | ||||||||| |||||
Sbjct: 130189 tggaatgcccccggacttgcatctgttgtacgactacgtgactggtcagcttcagtgctt 130248

                                                                          
Query: 265    ggcaaatctcggctactagaaacagcaggtcgccttgagaacacgcctgaccgacccaaa 324
              ||    |||||||||||||| |||||||||||||||||| |  ||| |||||| ||||||
Sbjct: 130249 ggt---tctcggctactagagacagcaggtcgccttgaggatccgcttgaccgtcccaaa 130305

                            
Query: 325    aaagtcgaactgga 338
              ||||||||||||||
Sbjct: 130306 aaagtcgaactgga 130319



 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 69/77 (89%)
 Strand = Plus / Plus

                                                                          
Query: 550    cgtggtggaacactggtcatttgtgactgctggtacttaagaatggtccagtcaaaaaca 609
              ||||||||| |||||||||| |||||||| || ||||| || || |||||||||||||||
Sbjct: 131197 cgtggtggagcactggtcatctgtgactgttgatacttcaggattgtccagtcaaaaaca 131256

                               
Query: 610    taatcaaactggaatcc 626
              ||||||||||| |||||
Sbjct: 131257 taatcaaactgaaatcc 131273



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 51/57 (89%)
 Strand = Plus / Plus

                                                                       
Query: 75     cctatcattggcatcgaaatttaggccttggatgccccttatagtggactcgtagtt 131
              |||||||| | |||||||||||||||| |||||||||| ||| || |||||||||||
Sbjct: 130041 cctatcatcgccatcgaaatttaggccctggatgccccgtatggtcgactcgtagtt 130097



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 45/51 (88%)
 Strand = Plus / Plus

                                                                 
Query: 482    ctgacagtctattattacttgcaatgggagccatccccgagctttgtcctg 532
              ||||||| || |||||| |||| || ||||||||| |||||||||||||||
Sbjct: 131031 ctgacagcctgttattatttgctataggagccatcgccgagctttgtcctg 131081



 Score = 48.1 bits (24), Expect = 0.035
 Identities = 45/52 (86%)
 Strand = Plus / Plus

                                                                  
Query: 382    gacttctgtttcgataagctgcctgcatttattcctgtaggtggaacctgac 433
              |||||||| || | || |||||||||||||||  ||| ||||||||||||||
Sbjct: 130483 gacttctgcttggctaggctgcctgcatttatagctggaggtggaacctgac 130534



to top

>gb|AC130727.1| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0560F03,
             complete sequence
          Length = 45160

 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 113/134 (84%), Gaps = 3/134 (2%)
 Strand = Plus / Minus

                                                                         
Query: 205   tggaatgtccctggactcacatctggtgcacgactacgcgatggttcagcttcactgctt 264
             ||||||| ||| |||||  |||||| || ||||||||| ||  | ||||||||| |||||
Sbjct: 41740 tggaatgcccccggacttgcatctgttgtacgactacgtgactggtcagcttcagtgctt 41681

                                                                         
Query: 265   ggcaaatctcggctactagaaacagcaggtcgccttgagaacacgcctgaccgacccaaa 324
             ||    |||||||||||||| |||||||||||||||||| |  ||| |||||| ||||||
Sbjct: 41680 ggt---tctcggctactagagacagcaggtcgccttgaggatccgcttgaccgtcccaaa 41624

                           
Query: 325   aaagtcgaactgga 338
             ||||||||||||||
Sbjct: 41623 aaagtcgaactgga 41610



 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 69/77 (89%)
 Strand = Plus / Minus

                                                                         
Query: 550   cgtggtggaacactggtcatttgtgactgctggtacttaagaatggtccagtcaaaaaca 609
             ||||||||| |||||||||| |||||||| || ||||| || || |||||||||||||||
Sbjct: 40732 cgtggtggagcactggtcatctgtgactgttgatacttcaggattgtccagtcaaaaaca 40673

                              
Query: 610   taatcaaactggaatcc 626
             ||||||||||| |||||
Sbjct: 40672 taatcaaactgaaatcc 40656



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 51/57 (89%)
 Strand = Plus / Minus

                                                                      
Query: 75    cctatcattggcatcgaaatttaggccttggatgccccttatagtggactcgtagtt 131
             |||||||| | |||||||||||||||| |||||||||| ||| || |||||||||||
Sbjct: 41888 cctatcatcgccatcgaaatttaggccctggatgccccgtatggtcgactcgtagtt 41832



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 45/51 (88%)
 Strand = Plus / Minus

                                                                
Query: 482   ctgacagtctattattacttgcaatgggagccatccccgagctttgtcctg 532
             ||||||| || |||||| |||| || ||||||||| |||||||||||||||
Sbjct: 40898 ctgacagcctgttattatttgctataggagccatcgccgagctttgtcctg 40848



 Score = 48.1 bits (24), Expect = 0.035
 Identities = 45/52 (86%)
 Strand = Plus / Minus

                                                                 
Query: 382   gacttctgtttcgataagctgcctgcatttattcctgtaggtggaacctgac 433
             |||||||| || | || |||||||||||||||  ||| ||||||||||||||
Sbjct: 41446 gacttctgcttggctaggctgcctgcatttatagctggaggtggaacctgac 41395



to top

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 113/134 (84%), Gaps = 3/134 (2%)
 Strand = Plus / Plus

                                                                            
Query: 205      tggaatgtccctggactcacatctggtgcacgactacgcgatggttcagcttcactgctt 264
                ||||||| ||| |||||  |||||| || ||||||||| ||  | ||||||||| |||||
Sbjct: 29351532 tggaatgcccccggacttgcatctgttgtacgactacgtgactggtcagcttcagtgctt 29351591

                                                                            
Query: 265      ggcaaatctcggctactagaaacagcaggtcgccttgagaacacgcctgaccgacccaaa 324
                ||    |||||||||||||| |||||||||||||||||| |  ||| |||||| ||||||
Sbjct: 29351592 ggt---tctcggctactagagacagcaggtcgccttgaggatccgcttgaccgtcccaaa 29351648

                              
Query: 325      aaagtcgaactgga 338
                ||||||||||||||
Sbjct: 29351649 aaagtcgaactgga 29351662



 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 69/77 (89%)
 Strand = Plus / Plus

                                                                            
Query: 550      cgtggtggaacactggtcatttgtgactgctggtacttaagaatggtccagtcaaaaaca 609
                ||||||||| |||||||||| |||||||| || ||||| || || |||||||||||||||
Sbjct: 29352540 cgtggtggagcactggtcatctgtgactgttgatacttcaggattgtccagtcaaaaaca 29352599

                                 
Query: 610      taatcaaactggaatcc 626
                ||||||||||| |||||
Sbjct: 29352600 taatcaaactgaaatcc 29352616



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 51/57 (89%)
 Strand = Plus / Plus

                                                                         
Query: 75       cctatcattggcatcgaaatttaggccttggatgccccttatagtggactcgtagtt 131
                |||||||| | |||||||||||||||| |||||||||| ||| || |||||||||||
Sbjct: 29351384 cctatcatcgccatcgaaatttaggccctggatgccccgtatggtcgactcgtagtt 29351440



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 45/51 (88%)
 Strand = Plus / Plus

                                                                   
Query: 482      ctgacagtctattattacttgcaatgggagccatccccgagctttgtcctg 532
                ||||||| || |||||| |||| || ||||||||| |||||||||||||||
Sbjct: 29352374 ctgacagcctgttattatttgctataggagccatcgccgagctttgtcctg 29352424



 Score = 48.1 bits (24), Expect = 0.035
 Identities = 45/52 (86%)
 Strand = Plus / Plus

                                                                    
Query: 382      gacttctgtttcgataagctgcctgcatttattcctgtaggtggaacctgac 433
                |||||||| || | || |||||||||||||||  ||| ||||||||||||||
Sbjct: 29351826 gacttctgcttggctaggctgcctgcatttatagctggaggtggaacctgac 29351877



to top

>gb|AC136217.4| Oryza sativa (japonica cultivar-group) chromosome 5 clone
           OSJNBa0030I14, complete sequence
          Length = 159035

 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 69/77 (89%)
 Strand = Plus / Plus

                                                                       
Query: 550 cgtggtggaacactggtcatttgtgactgctggtacttaagaatggtccagtcaaaaaca 609
           ||||||||| |||||||||| |||||||| || ||||| || || |||||||||||||||
Sbjct: 565 cgtggtggagcactggtcatctgtgactgttgatacttcaggattgtccagtcaaaaaca 624

                            
Query: 610 taatcaaactggaatcc 626
           ||||||||||| |||||
Sbjct: 625 taatcaaactgaaatcc 641



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 45/51 (88%)
 Strand = Plus / Plus

                                                              
Query: 482 ctgacagtctattattacttgcaatgggagccatccccgagctttgtcctg 532
           ||||||| || |||||| |||| || ||||||||| |||||||||||||||
Sbjct: 399 ctgacagcctgttattatttgctataggagccatcgccgagctttgtcctg 449



to top

>dbj|AP006408.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT23O19, TM0297b,
             complete sequence
          Length = 43490

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 51/56 (91%)
 Strand = Plus / Plus

                                                                     
Query: 571   tgtgactgctggtacttaagaatggtccagtcaaaaacataatcaaactggaatcc 626
             ||||||||||| ||||| |  |||||||||||||| ||||||||||||||||||||
Sbjct: 43316 tgtgactgctgatacttcaagatggtccagtcaaacacataatcaaactggaatcc 43371



to top

>gb|AC144473.8| Medicago truncatula clone mth2-15l5, complete sequence
          Length = 128860

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 44/49 (89%)
 Strand = Plus / Minus

                                                              
Query: 569   tttgtgactgctggtacttaagaatggtccagtcaaaaacataatcaaa 617
             ||||||||||||||||||| | ||| ||||| ||||| |||||||||||
Sbjct: 95720 tttgtgactgctggtacttcaaaattgtccaatcaaatacataatcaaa 95672



to top

>gb|DQ196179.1|DQ196179S1 Triticum monococcum cultivar DV92 putative protein kinase ADK1
           gene, partial cds
          Length = 839

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 55/64 (85%)
 Strand = Plus / Plus

                                                                       
Query: 275 ggctactagaaacagcaggtcgccttgagaacacgcctgaccgacccaaaaaagtcgaac 334
           |||| ||||| |||||||||||||||||| |  ||| |||||| ||||  ||||||||||
Sbjct: 80  ggctgctagagacagcaggtcgccttgaggatccgcttgaccgtcccagcaaagtcgaac 139

               
Query: 335 tgga 338
           ||||
Sbjct: 140 tgga 143



 Score = 44.1 bits (22), Expect = 0.55
 Identities = 43/50 (86%)
 Strand = Plus / Plus

                                                             
Query: 382 gacttctgtttcgataagctgcctgcatttattcctgtaggtggaacctg 431
           ||||||||||| |  | |||||||||||||||  ||| ||||||||||||
Sbjct: 325 gacttctgtttggccaggctgcctgcatttatagctggaggtggaacctg 374



to top

>gb|AC137554.15| Medicago truncatula clone mth2-17j18, complete sequence
          Length = 121248

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 51/59 (86%)
 Strand = Plus / Minus

                                                                        
Query: 568   atttgtgactgctggtacttaagaatggtccagtcaaaaacataatcaaactggaatcc 626
             ||||| || ||||| ||||| | ||||||||| || || ||||||||||||||||||||
Sbjct: 11598 atttgagattgctgatacttcaaaatggtccaatcgaagacataatcaaactggaatcc 11540



to top

>gb|AC136955.20| Medicago truncatula clone mth2-10p1, complete sequence
          Length = 107635

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 51/59 (86%)
 Strand = Plus / Plus

                                                                        
Query: 568   atttgtgactgctggtacttaagaatggtccagtcaaaaacataatcaaactggaatcc 626
             ||||| || ||||| ||||| | ||||||||| || || ||||||||||||||||||||
Sbjct: 33909 atttgagattgctgatacttcaaaatggtccaatcgaagacataatcaaactggaatcc 33967



to top

>ref|NM_191682.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1419

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 46/53 (86%)
 Strand = Plus / Minus

                                                                
Query: 568 atttgtgactgctggtacttaagaatggtccagtcaaaaacataatcaaactg 620
           ||||| || ||||||||||| || || ||||||||||| ||||| ||||||||
Sbjct: 899 atttgagattgctggtacttcagtattgtccagtcaaacacatagtcaaactg 847



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                             
Query: 270  atctcggctactagaaacagcaggtcgccttga 302
            |||||||||||| ||||||||||| | ||||||
Sbjct: 1194 atctcggctacttgaaacagcaggcctccttga 1162



to top

>gb|BT014491.1| Lycopersicon esculentum clone 133852F, mRNA sequence
          Length = 2080

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                         
Query: 592  atggtccagtcaaaaacataatcaaactg 620
            |||||||||||||| ||||||||||||||
Sbjct: 1138 atggtccagtcaaatacataatcaaactg 1110



to top

>dbj|AP003273.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0510F09
          Length = 138277

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 46/53 (86%)
 Strand = Plus / Minus

                                                                   
Query: 568    atttgtgactgctggtacttaagaatggtccagtcaaaaacataatcaaactg 620
              ||||| || ||||||||||| || || ||||||||||| ||||| ||||||||
Sbjct: 123211 atttgagattgctggtacttcagtattgtccagtcaaacacatagtcaaactg 123159



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                               
Query: 270    atctcggctactagaaacagcaggtcgccttga 302
              |||||||||||| ||||||||||| | ||||||
Sbjct: 124117 atctcggctacttgaaacagcaggcctccttga 124085



to top

>gb|AF180356.1|AF180356 Brassica oleracea isolate B265 EIF4A protein (EIF4A) gene, partial
            cds; putative protein gene, complete cds; and casein
            kinase I-like protein (CK1b) gene, partial cds
          Length = 6639

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                         
Query: 595  gtccagtcaaaaacataatcaaactggaa 623
            ||||||||||| |||||||||||||||||
Sbjct: 4098 gtccagtcaaatacataatcaaactggaa 4126



to top

>gb|BT017235.1| Zea mays clone EL01N0304F03.c mRNA sequence
          Length = 1312

 Score = 48.1 bits (24), Expect = 0.035
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                       
Query: 583 tacttaagaatggtccagtcaaaaacataatcaaactggaatcc 626
           ||||| |||||||||||||| || ||||| ||||||||| ||||
Sbjct: 403 tacttcagaatggtccagtcgaacacatagtcaaactggtatcc 360



to top

>gb|AY109168.1| Zea mays PCO138828 mRNA sequence
          Length = 1119

 Score = 48.1 bits (24), Expect = 0.035
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                       
Query: 583 tacttaagaatggtccagtcaaaaacataatcaaactggaatcc 626
           ||||| |||||||||||||| || ||||| ||||||||| ||||
Sbjct: 261 tacttcagaatggtccagtcgaacacatagtcaaactggtatcc 218



to top

>ref|XM_468332.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2251

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                       
Query: 591  aatggtccagtcaaaaacataatcaaa 617
            ||||||||||||||| |||||||||||
Sbjct: 1365 aatggtccagtcaaatacataatcaaa 1339



to top

>gb|AY223158.1| Schistosoma japonicum clone ZZD1529 mRNA sequence
          Length = 1181

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 595 gtccagtcaaaaacataatcaaactgg 621
           |||||||| ||||||||||||||||||
Sbjct: 904 gtccagtcgaaaacataatcaaactgg 878



to top

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                           
Query: 591      aatggtccagtcaaaaacataatcaaa 617
                ||||||||||||||| |||||||||||
Sbjct: 34666415 aatggtccagtcaaatacataatcaaa 34666389



to top

>dbj|AP004081.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1116_E04
          Length = 94096

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                        
Query: 591   aatggtccagtcaaaaacataatcaaa 617
             ||||||||||||||| |||||||||||
Sbjct: 23366 aatggtccagtcaaatacataatcaaa 23340



to top

>dbj|AK111554.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013052A13, full
            insert sequence
          Length = 2251

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                       
Query: 591  aatggtccagtcaaaaacataatcaaa 617
            ||||||||||||||| |||||||||||
Sbjct: 1365 aatggtccagtcaaatacataatcaaa 1339



to top

>ref|NM_100274.2| Arabidopsis thaliana ADK1 (DUAL SPECIFICITY KINASE 1); kinase
            AT1G03930 (ADK1) mRNA, complete cds
          Length = 2338

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 595  gtccagtcaaaaacataatcaaactg 620
            ||||||||||| ||||||||||||||
Sbjct: 1542 gtccagtcaaatacataatcaaactg 1517



to top

>gb|AY943848.1| Arabidopsis thaliana casein kinase 1-like protein 9b (CKL9b) mRNA,
           complete cds
          Length = 1416

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 595 gtccagtcaaaaacataatcaaactg 620
           ||||||||||| ||||||||||||||
Sbjct: 872 gtccagtcaaatacataatcaaactg 847



to top

>gb|AY943847.1| Arabidopsis thaliana casein kinase 1-like protein 9a (CKL9a) mRNA,
           complete cds
          Length = 960

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 595 gtccagtcaaaaacataatcaaactg 620
           ||||||||||| ||||||||||||||
Sbjct: 872 gtccagtcaaatacataatcaaactg 847



to top

>gb|AC182655.2| Populus trichocarpa clone Pop1-121O5, complete sequence
          Length = 87839

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 595   gtccagtcaaaaacataatcaaactg 620
             ||||||||||| ||||||||||||||
Sbjct: 85835 gtccagtcaaatacataatcaaactg 85810



to top

>gb|AY096519.1| Arabidopsis thaliana putative protein kinase ADK1 (At1g03930) mRNA,
           complete cds
          Length = 1447

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 595 gtccagtcaaaaacataatcaaactg 620
           ||||||||||| ||||||||||||||
Sbjct: 872 gtccagtcaaatacataatcaaactg 847



to top

>gb|AY065409.1| Arabidopsis thaliana putative protein kinase ADK1 (At1g03930) mRNA,
            complete cds
          Length = 1939

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 595  gtccagtcaaaaacataatcaaactg 620
            ||||||||||| ||||||||||||||
Sbjct: 1212 gtccagtcaaatacataatcaaactg 1187



to top

>gb|AY101520.1| Arabidopsis thaliana At1g03930/F21M11_14 mRNA, complete cds
          Length = 1416

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 595 gtccagtcaaaaacataatcaaactg 620
           ||||||||||| ||||||||||||||
Sbjct: 872 gtccagtcaaatacataatcaaactg 847



to top

>gb|AY075642.1| Arabidopsis thaliana At1g03930/F21M11_14 mRNA, complete cds
          Length = 2337

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 595  gtccagtcaaaaacataatcaaactg 620
            ||||||||||| ||||||||||||||
Sbjct: 1541 gtccagtcaaatacataatcaaactg 1516



to top

>gb|U48779.1|ATU48779 Arabidopsis thaliana dual specificity kinase 1 (ADK1) mRNA, complete
            cds
          Length = 1541

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 595  gtccagtcaaaaacataatcaaactg 620
            ||||||||||| ||||||||||||||
Sbjct: 1409 gtccagtcaaatacataatcaaactg 1384



to top

>gb|AC003027.1| Arabidopsis thaliana chromosome I BAC F21M11 genomic sequence, complete
             sequence
          Length = 119914

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 595   gtccagtcaaaaacataatcaaactg 620
             ||||||||||| ||||||||||||||
Sbjct: 49560 gtccagtcaaatacataatcaaactg 49585



to top

>ref|NM_105930.2| Arabidopsis thaliana ATP binding / casein kinase I/ kinase/ protein
            kinase/ protein serine/threonine kinase/ protein-tyrosine
            kinase AT1G72710 mRNA, complete cds
          Length = 2086

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 595  gtccagtcaaaaacataatcaaactggaa 623
            ||||| ||||| |||||||||||||||||
Sbjct: 1151 gtccaatcaaatacataatcaaactggaa 1123



to top

>ref|XM_473169.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1365

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 592 atggtccagtcaaaaacataatcaa 616
           |||||||||||||| ||||||||||
Sbjct: 875 atggtccagtcaaatacataatcaa 851



to top

>gb|AY943843.1| Arabidopsis thaliana casein kinase 1-like protein 2 (CKL2) mRNA,
           complete cds
          Length = 1398

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 595 gtccagtcaaaaacataatcaaactggaa 623
           ||||| ||||| |||||||||||||||||
Sbjct: 869 gtccaatcaaatacataatcaaactggaa 841



to top

>gb|AC147570.3| Homo sapiens BAC clone RP11-1176F21 from UL, complete sequence
          Length = 191237

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 553   ggtggaacactggtcatttgt 573
             |||||||||||||||||||||
Sbjct: 92035 ggtggaacactggtcatttgt 92015



to top

>gb|AC105457.1| Homo sapiens chromosome 21 clone RP11-271G11 map p11-q21.1, complete
             sequence
          Length = 164841

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 553   ggtggaacactggtcatttgt 573
             |||||||||||||||||||||
Sbjct: 99923 ggtggaacactggtcatttgt 99943



to top

>gb|BT010328.1| Arabidopsis thaliana At1g72710 mRNA, complete cds
          Length = 1398

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 595 gtccagtcaaaaacataatcaaactggaa 623
           ||||| ||||| |||||||||||||||||
Sbjct: 869 gtccaatcaaatacataatcaaactggaa 841



to top

>emb|AL606659.3|OSJN00108 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0070J16,
             complete sequence
          Length = 130718

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 592   atggtccagtcaaaaacataatcaa 616
             |||||||||||||| ||||||||||
Sbjct: 81536 atggtccagtcaaatacataatcaa 81560



to top

>gb|AY059850.1| Arabidopsis thaliana putative casein kinase I (At1g72710; F28P22.10)
            mRNA, complete cds
          Length = 2020

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 595  gtccagtcaaaaacataatcaaactggaa 623
            ||||| ||||| |||||||||||||||||
Sbjct: 1151 gtccaatcaaatacataatcaaactggaa 1123



to top

>gb|AC010926.12|AC010926 Arabidopsis thaliana chromosome 1 BAC F28P22 genomic sequence, complete
             sequence
          Length = 101105

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 595   gtccagtcaaaaacataatcaaactggaa 623
             ||||| ||||| |||||||||||||||||
Sbjct: 35232 gtccaatcaaatacataatcaaactggaa 35260



to top

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 592      atggtccagtcaaaaacataatcaa 616
                |||||||||||||| ||||||||||
Sbjct: 25701809 atggtccagtcaaatacataatcaa 25701833



to top

>dbj|AK111987.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-026-B12, full
            insert sequence
          Length = 1795

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 592  atggtccagtcaaaaacataatcaa 616
            |||||||||||||| ||||||||||
Sbjct: 1192 atggtccagtcaaatacataatcaa 1168



to top

>emb|AL163204.2|HS21C004 Homo sapiens chromosome 21 segment HS21C004
          Length = 340000

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 553    ggtggaacactggtcatttgt 573
              |||||||||||||||||||||
Sbjct: 266868 ggtggaacactggtcatttgt 266888



to top

>emb|AL731630.2|OSJN00273 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0072M01,
             complete sequence
          Length = 127712

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 592   atggtccagtcaaaaacataatcaa 616
             |||||||||||||| ||||||||||
Sbjct: 24736 atggtccagtcaaatacataatcaa 24760



to top

>dbj|AP001466.1| Homo sapiens genomic DNA, chromosome 21q11.1, clone:R111H17,
             D21S290-LL56 region, complete sequence
          Length = 115693

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 553   ggtggaacactggtcatttgt 573
             |||||||||||||||||||||
Sbjct: 58143 ggtggaacactggtcatttgt 58163



to top

>gb|AC159998.6| Mus musculus BAC clone RP24-576J22 from chromosome 10, complete
             sequence
          Length = 166313

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 562   ctggtcatttgtgactgctg 581
             ||||||||||||||||||||
Sbjct: 21923 ctggtcatttgtgactgctg 21942



to top

>gb|CP000068.1| Trypanosoma brucei chromosome 5, complete sequence
          Length = 1608198

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 595    gtccagtcaaaaacataatc 614
              ||||||||||||||||||||
Sbjct: 273276 gtccagtcaaaaacataatc 273257



 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 595    gtccagtcaaaaacataatc 614
              ||||||||||||||||||||
Sbjct: 270206 gtccagtcaaaaacataatc 270187



to top

>gb|AC159441.1| Trypanosoma brucei chromosome 5 clone RPCI93-30F7, complete sequence
          Length = 101712

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 595   gtccagtcaaaaacataatc 614
             ||||||||||||||||||||
Sbjct: 19961 gtccagtcaaaaacataatc 19980



 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 595   gtccagtcaaaaacataatc 614
             ||||||||||||||||||||
Sbjct: 16899 gtccagtcaaaaacataatc 16918



to top

>gb|AC159432.1| Trypanosoma brucei chromosome 5 clone RPCI93-28F8, complete sequence
          Length = 140539

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 595    gtccagtcaaaaacataatc 614
              ||||||||||||||||||||
Sbjct: 123320 gtccagtcaaaaacataatc 123339



 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 595    gtccagtcaaaaacataatc 614
              ||||||||||||||||||||
Sbjct: 120250 gtccagtcaaaaacataatc 120269



to top

>gb|AC123549.5| Mus musculus BAC clone RP24-91K17 from chromosome 6, complete sequence
          Length = 182759

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 30     agaagatactggtagtgaaa 49
              ||||||||||||||||||||
Sbjct: 136482 agaagatactggtagtgaaa 136501



to top

>gb|AC004417.1| Homo sapiens BAC clone CTA-325M7 from 7, complete sequence
          Length = 127514

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 335   tggacaacacagcttccttc 354
             ||||||||||||||||||||
Sbjct: 89244 tggacaacacagcttccttc 89225



to top

>gb|AC080144.11| Mus musculus chromosome 6, clone RP23-237K24, complete sequence
          Length = 184091

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 30     agaagatactggtagtgaaa 49
              ||||||||||||||||||||
Sbjct: 154569 agaagatactggtagtgaaa 154550



to top

>ref|XM_819307.1| Trypanosoma brucei TREU927 clone RPCI93-28F8 casein kinase I
           epsilon isoform (Tb927.5.790) partial mRNA
          Length = 993

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 595 gtccagtcaaaaacataatc 614
           ||||||||||||||||||||
Sbjct: 908 gtccagtcaaaaacataatc 889



to top

>ref|XM_819306.1| Trypanosoma brucei TREU927 clone RPCI93-28F8 casein kinase
           (Tb927.5.800) partial mRNA
          Length = 999

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 595 gtccagtcaaaaacataatc 614
           ||||||||||||||||||||
Sbjct: 887 gtccagtcaaaaacataatc 868



to top

>gb|AC117275.3| Mus musculus BAC clone RP23-383F11 from chromosome 18, complete sequence
          Length = 209162

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 603    aaaaacataatcaaactggaatcc 626
              ||||||| ||||||||||||||||
Sbjct: 174030 aaaaacaaaatcaaactggaatcc 174053



to top

>emb|AL024505.1|HS112L6 Human DNA sequence from clone RP1-112L6 on chromosome 6q16, complete
              sequence
          Length = 144097

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 333    actggacaacacagcttcct 352
              ||||||||||||||||||||
Sbjct: 105307 actggacaacacagcttcct 105326



to top

>ref|NM_001031290.1| Gallus gallus similar to Ubiquitin carboxyl-terminal hydrolase 1
           (Ubiquitin thiolesterase 1) (Ubiquitin-specific
           processing protease 1) (Deubiquitinating enzyme 1)
           (hUBP) (LOC424685), mRNA
          Length = 3382

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 464 ttcttccttcttcagtggctgaca 487
           |||||||||||||||| |||||||
Sbjct: 812 ttcttccttcttcagtagctgaca 789



to top

>gb|AC163436.3| Mus musculus chromosome 1, clone RP23-102H12, complete sequence
          Length = 198253

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 464   ttcttccttcttcagtggct 483
             ||||||||||||||||||||
Sbjct: 48680 ttcttccttcttcagtggct 48699



to top

>emb|AJ720494.1| Gallus gallus mRNA for hypothetical protein, clone 19b7
          Length = 3382

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 464 ttcttccttcttcagtggctgaca 487
           |||||||||||||||| |||||||
Sbjct: 812 ttcttccttcttcagtagctgaca 789



to top

>gb|AC024599.9| Homo sapiens chromosome 10 clone RP11-159H3, complete sequence
          Length = 173391

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 604    aaaacataatcaaactggaa 623
              ||||||||||||||||||||
Sbjct: 136501 aaaacataatcaaactggaa 136520



to top

>gb|AC004077.3| Arabidopsis thaliana chromosome 2 clone T31E10 map ve016, complete
            sequence
          Length = 93060

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 598  cagtcaaaaacataatcaaactgg 621
            ||||||||||||||||||| ||||
Sbjct: 3827 cagtcaaaaacataatcaatctgg 3804



to top

>gb|AC132415.4| Mus musculus BAC clone RP23-246C16 from chromosome 10, complete
            sequence
          Length = 173182

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 562  ctggtcatttgtgactgctg 581
            ||||||||||||||||||||
Sbjct: 1008 ctggtcatttgtgactgctg 989



to top

>gb|AC021863.5|AC021863 Homo sapiens BAC clone RP11-689K5 from 4, complete sequence
          Length = 194206

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 400    ctgcctgcatttattcctgt 419
              ||||||||||||||||||||
Sbjct: 164619 ctgcctgcatttattcctgt 164638



to top

>gb|AC153384.4| Mus musculus 6 BAC RP23-388D3 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 203979

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 201    tctctggaatgtccctggac 220
              ||||||||||||||||||||
Sbjct: 158185 tctctggaatgtccctggac 158166



to top

>gb|AC145987.2| Pan troglodytes BAC clone RP43-165D6 from chromosome 7, complete
             sequence
          Length = 158415

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 335   tggacaacacagcttccttc 354
             ||||||||||||||||||||
Sbjct: 89261 tggacaacacagcttccttc 89242



to top

>gb|AF180355.1|AF180355 Brassica oleracea isolate B265 ABI1 protein (ABI1) gene, partial cds;
             RPS2 protein (RPS2) and N-myristoyl transferase (N-MYR)
             genes, complete cds; and CK1a protein (CK1a) gene, partial
             cds
          Length = 11725

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 41/48 (85%)
 Strand = Plus / Plus

                                                             
Query: 570   ttgtgactgctggtacttaagaatggtccagtcaaaaacataatcaaa 617
             |||||| || |||||||| |  |||||||||||||| || ||||||||
Sbjct: 10651 ttgtgattgttggtacttcaagatggtccagtcaaacacgtaatcaaa 10698



to top

>gb|AC099744.3| Papio anubis clone RP41-65E12, complete sequence
          Length = 173295

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 335   tggacaacacagcttccttc 354
             ||||||||||||||||||||
Sbjct: 49267 tggacaacacagcttccttc 49248



to top

>ref|NM_031739.1| Rattus norvegicus potassium voltage gated channel, Shal-related
            family, member 3 (Kcnd3), mRNA
          Length = 7258

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 141  agacttgtgcctggggtcag 160
            ||||||||||||||||||||
Sbjct: 2794 agacttgtgcctggggtcag 2813



to top

>gb|AC102900.12| Mus musculus chromosome 1, clone RP24-315J13, complete sequence
          Length = 192545

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 464   ttcttccttcttcagtggct 483
             ||||||||||||||||||||
Sbjct: 14209 ttcttccttcttcagtggct 14228



to top

>gb|U42975.1|RNU42975 Rattus norvegicus Shal-related potassium channel Kv4.3 mRNA, complete
            cds
          Length = 7258

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 141  agacttgtgcctggggtcag 160
            ||||||||||||||||||||
Sbjct: 2794 agacttgtgcctggggtcag 2813



to top

>gb|AC109203.9| Mus musculus chromosome 18, clone RP23-2B18, complete sequence
          Length = 216783

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 603    aaaaacataatcaaactggaatcc 626
              ||||||| ||||||||||||||||
Sbjct: 205455 aaaaacaaaatcaaactggaatcc 205432



to top

>gb|AF044032.1|AF044032 Arabidopsis thaliana glutathione S-conjugate pump (MRP2) gene,
           promoter sequence
          Length = 3009

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 598 cagtcaaaaacataatcaaactgg 621
           ||||||||||||||||||| ||||
Sbjct: 199 cagtcaaaaacataatcaatctgg 222



to top

>gb|AC147717.1| Gallus gallus BAC clone CH261-5M18 from chromosome unknown, complete
              sequence
          Length = 189841

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 458    cacttattcttccttcttca 477
              ||||||||||||||||||||
Sbjct: 135861 cacttattcttccttcttca 135880



to top

>gb|L48619.1|RATKV43R Rattus norvegicus voltage-gated K+ channel (Kv43) mRNA, complete cds
          Length = 4262

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 141  agacttgtgcctggggtcag 160
            ||||||||||||||||||||
Sbjct: 2359 agacttgtgcctggggtcag 2378


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,765,939
Number of Sequences: 3902068
Number of extensions: 4765939
Number of successful extensions: 80774
Number of sequences better than 10.0: 84
Number of HSP's better than 10.0 without gapping: 85
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 80461
Number of HSP's gapped (non-prelim): 301
length of query: 632
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 609
effective length of database: 17,143,297,704
effective search space: 10440268301736
effective search space used: 10440268301736
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top