Clone Name | rbasd2k18 |
---|---|
Clone Library Name | barley_pub |
>HCYB_SCUCO (Q8IFJ8) Hemocyanin subunit B precursor| Length = 659 Score = 32.7 bits (73), Expect = 0.45 Identities = 23/90 (25%), Positives = 37/90 (41%), Gaps = 8/90 (8%) Frame = +2 Query: 2 EYVRHRYMVCIYTQPHSGGRVHQDITSVFQIPVVQSSSESRF------QELYNEVEDGQE 163 E VRHR ++ S VH+D T +P + +F E+ N + GQE Sbjct: 106 EIVRHRINEDMFYYAFSVAAVHRDDTRGINLPRIHEIYPDKFLKHKVIVEVKNSINSGQE 165 Query: 164 EP--NLNHVLVQIIRPRKELRGISQGVRIN 247 +P + H + P +L + V +N Sbjct: 166 DPLIDATHEFTDLRDPNSKLHYFLEDVGLN 195
>SYC_SULSO (Q97WE6) Cysteinyl-tRNA synthetase (EC 6.1.1.16) (Cysteine--tRNA| ligase) (CysRS) Length = 470 Score = 30.8 bits (68), Expect = 1.7 Identities = 13/60 (21%), Positives = 30/60 (50%) Frame = -1 Query: 370 PLAQAYFWFSRRVYSTVEAGKDTIEAAKGVASRLNKDDNLEVYPDPLGDPTKFFTRPDDL 191 P Y++ + S ++ ++ +E AK R+ D++ + D + + KF+ + DD+ Sbjct: 286 PSVLRYWYLTSHYRSPIDFSEEALEQAKSALQRIK--DSMAIIRDVISEGPKFYVKDDDI 343
>TCPE_SCHPO (Q9UTM4) T-complex protein 1 subunit epsilon (TCP-1-epsilon)| (CCT-epsilon) Length = 546 Score = 30.0 bits (66), Expect = 2.9 Identities = 17/66 (25%), Positives = 30/66 (45%), Gaps = 9/66 (13%) Frame = +2 Query: 23 MVCIYTQPHSGGRVHQDITSVFQIPVVQSSSESRFQELYNEVEDGQE---------EPNL 175 + C + P + DITSV + +Q+ + +FQE+ V+D + Sbjct: 253 LTCPFEPPKPKTKHKLDITSVSEFEALQAYEKEKFQEMIKHVKDAGANLVICQWGFDDEA 312 Query: 176 NHVLVQ 193 NH+L+Q Sbjct: 313 NHLLLQ 318
>OSA_DROME (Q8IN94) Trithorax group protein osa (Protein eyelid)| Length = 2716 Score = 29.3 bits (64), Expect = 5.0 Identities = 16/41 (39%), Positives = 19/41 (46%) Frame = +1 Query: 154 RPGRAQSEPRPGSDHPAS*RTSWDLPGGQDKPPDCRPCSAG 276 RP S P PGS HP + +P Q +PP SAG Sbjct: 409 RPWPGGSSPSPGSGHPLPPASPHHVPPLQQQPPPPPHVSAG 449
>ORN_TROW8 (Q83HW9) Oligoribonuclease (EC 3.1.-.-)| Length = 184 Score = 28.5 bits (62), Expect = 8.6 Identities = 16/46 (34%), Positives = 24/46 (52%) Frame = +2 Query: 188 VQIIRPRKELRGISQGVRINLQIVVLVQPGCHALGGLDRVLAGLHR 325 V +I K+L + +GV V+V P ALG +D +A +HR Sbjct: 30 VAVIVTDKDLLPLDEGVN------VVVSPSSEALGAMDNYVARMHR 69
>GA2L1_HUMAN (Q99501) GAS2-like protein 1 (Growth arrest-specific 2-like 1)| (GAS2-related protein on chromosome 22) (GAR22 protein) Length = 681 Score = 28.5 bits (62), Expect = 8.6 Identities = 17/49 (34%), Positives = 22/49 (44%) Frame = -3 Query: 275 PAEQGRQSGGLS*PPGRSHEVLYEAG*SEPGRGSDWALPGRPLLHCTVP 129 P + GR + GL P ++ + G PG G PG PL CT P Sbjct: 580 PGDSGRTANGLPGPRSQALSSSSDEGSPCPGMGGPLDAPGSPLA-CTEP 627 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 62,851,698 Number of Sequences: 219361 Number of extensions: 1239400 Number of successful extensions: 4642 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 4500 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4641 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2909956200 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)