>gb|AC155651.4| Mus musculus 6 BAC RP24-111E13 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 175599

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 248   tgcgaacaagacagagccatgc 269
             ||||||||||||||||||||||
Sbjct: 50287 tgcgaacaagacagagccatgc 50266

>gb|AC158664.5| Mus musculus 6 BAC RP23-24F17 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 232894

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 248    tgcgaacaagacagagccatgc 269
              ||||||||||||||||||||||
Sbjct: 216736 tgcgaacaagacagagccatgc 216757

>emb|AL513443.1|NC93G11 Neurospora crassa DNA linkage group V Cosmid contig 93G11
          Length = 86075

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 170   accgaaccatcattcatatcagtgc 194
             ||||||||| |||||||||||||||
Sbjct: 15697 accgaaccaacattcatatcagtgc 15721

>gb|AY664414.1| Zea mays cultivar B73 locus 9008, complete sequence
          Length = 339089

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 306   ggaggcggggtctgcgggcgc 326
             |||||||||||||||||||||
Sbjct: 89435 ggaggcggggtctgcgggcgc 89455

>gb|M95500.1|WHTWIR1APR Wheat WIR1A gene, complete cds
          Length = 842

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 507 gacgaanagagcgatctggaggagcacc 534
           |||||| ||||||||||| |||||||||
Sbjct: 227 gacgaagagagcgatctgcaggagcacc 200

>ref|XM_547974.2| PREDICTED: Canis familiaris similar to CG32732-PA (LOC490852), mRNA
          Length = 2695

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 437  ccagagcaccaccaccgagtcctg 460
            |||||||||||||||| |||||||
Sbjct: 2187 ccagagcaccaccacccagtcctg 2164

>gb|AC003988.1| Homo sapiens PAC clone RP5-1171L6 from 7, complete sequence
          Length = 58725

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 124   attttggcaaatactagatg 143
             ||||||||||||||||||||
Sbjct: 12357 attttggcaaatactagatg 12338

>emb|BX572600.1| Rhodopseudomonas palustris CGA009 complete genome; segment 8/16
          Length = 349640

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 442    gcaccaccaccgagtcctgg 461
              ||||||||||||||||||||
Sbjct: 236096 gcaccaccaccgagtcctgg 236077

>gb|AF192304.6| Homo sapiens chromosome 8 clone CTC-458A3 map 8q24.3, complete sequence
          Length = 177028

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 117   catctttattttggcaaata 136
             ||||||||||||||||||||
Sbjct: 50205 catctttattttggcaaata 50186

>emb|AJ431203.1|NTO431203 Nicotiana tomentosiformis endogenous pararetrovirus partial
           proviral ORF3 & ORF4 pseudogenes
          Length = 1928

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 215 ggttcagtataagatcctga 234
           ||||||||||||||||||||
Sbjct: 620 ggttcagtataagatcctga 601


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,841,828
Number of Sequences: 3902068
Number of extensions: 3841828
Number of successful extensions: 80108
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 80090
Number of HSP's gapped (non-prelim): 18
length of query: 620
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 597
effective length of database: 17,143,297,704
effective search space: 10234548729288
effective search space used: 10234548729288
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)