Clone Name | rbasd2k03 |
---|---|
Clone Library Name | barley_pub |
>gb|BC073027.1| Xenopus laevis cDNA clone IMAGE:5048869, partial cds Length = 1910 Score = 153 bits (77), Expect = 1e-34 Identities = 103/113 (91%), Gaps = 1/113 (0%) Strand = Plus / Minus Query: 1 caccggataccaacgatgctnggtngngtaaaacatttatgctaagctcttctatcgttg 60 |||||||||||||||||| | ||| | ||||||||||| ||||||||||||||||||||| Sbjct: 428 caccggataccaacgatgtttggttgtgtaaaacattt-tgctaagctcttctatcgttg 370 Query: 61 ncncaggtttagctntaacatcattaagtctgncctttaggacaagcncatgt 113 | ||||||||||| ||||||||||||||||| |||||||||||||| ||||| Sbjct: 369 gctcaggtttagctttaacatcattaagtctggcctttaggacaagctcatgt 317
>emb|CT027939.1| Xenopus tropicalis finished cDNA, clone TGas066o19 Length = 559 Score = 85.7 bits (43), Expect = 2e-14 Identities = 65/74 (87%) Strand = Plus / Minus Query: 40 tgctaagctcttctatcgttgncncaggtttagctntaacatcattaagtctgnccttta 99 |||||||||||||| | |||| | ||||||||||| |||| |||||||| ||| |||||| Sbjct: 371 tgctaagctcttcttttgttggctcaggtttagctttaacttcattaagcctggccttta 312 Query: 100 ggacaagcncatgt 113 |||||||| ||||| Sbjct: 311 ggacaagctcatgt 298
>gb|AC150004.3| Mus musculus chromosome 7, clone RP24-368P9, complete sequence Length = 176113 Score = 38.2 bits (19), Expect = 5.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 33 acatttatgctaagctctt 51 ||||||||||||||||||| Sbjct: 49775 acatttatgctaagctctt 49793
>emb|CT010433.6| Mouse DNA sequence from clone RP23-239M23 on chromosome 17, complete sequence Length = 154367 Score = 38.2 bits (19), Expect = 5.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 33 acatttatgctaagctctt 51 ||||||||||||||||||| Sbjct: 30191 acatttatgctaagctctt 30209
>gb|AC102561.4| Mus musculus chromosome 7, clone RP23-201O19, complete sequence Length = 195549 Score = 38.2 bits (19), Expect = 5.1 Identities = 19/19 (100%) Strand = Plus / Minus Query: 33 acatttatgctaagctctt 51 ||||||||||||||||||| Sbjct: 69687 acatttatgctaagctctt 69669
>emb|AL935169.6| Zebrafish DNA sequence from clone CH211-227E15, complete sequence Length = 158122 Score = 38.2 bits (19), Expect = 5.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 30 aaaacatttatgctaagct 48 ||||||||||||||||||| Sbjct: 138690 aaaacatttatgctaagct 138708
>gb|AC146978.7| Mus musculus chromosome 7, clone RP24-217F6, complete sequence Length = 152682 Score = 38.2 bits (19), Expect = 5.1 Identities = 19/19 (100%) Strand = Plus / Minus Query: 33 acatttatgctaagctctt 51 ||||||||||||||||||| Sbjct: 112459 acatttatgctaagctctt 112441
>gb|AC167161.10| Mus musculus chromosome 7, clone RP23-367H8, complete sequence Length = 193612 Score = 38.2 bits (19), Expect = 5.1 Identities = 19/19 (100%) Strand = Plus / Minus Query: 33 acatttatgctaagctctt 51 ||||||||||||||||||| Sbjct: 136440 acatttatgctaagctctt 136422 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 435,847 Number of Sequences: 3902068 Number of extensions: 435847 Number of successful extensions: 28661 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 8 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 28652 Number of HSP's gapped (non-prelim): 8 length of query: 113 length of database: 17,233,045,268 effective HSP length: 21 effective length of query: 92 effective length of database: 17,151,101,840 effective search space: 1577901369280 effective search space used: 1577901369280 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)