Clone Name	rbasd2k01
Clone Library Name	barley_pub

---

No.	Definition	Score (bits)	E Value
1	ref|XM_507134.1| PREDICTED Oryza sativa (japonica cultivar-group...	228	1e-56
2	ref|XM_480154.1| Oryza sativa (japonica cultivar-group), mRNA	228	1e-56
3	dbj|AK099134.1| Oryza sativa (japonica cultivar-group) cDNA clon...	228	1e-56
4	dbj|AK070325.1| Oryza sativa (japonica cultivar-group) cDNA clon...	228	1e-56
5	gb|BT017514.1| Zea mays clone EL01N0419B06.c mRNA sequence	168	8e-39
6	dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D...	165	1e-37
7	dbj|AP003940.3| Oryza sativa (japonica cultivar-group) genomic D...	165	1e-37
8	gb|AY108535.1| Zea mays PCO135925 mRNA sequence	153	5e-34
9	emb|AJ223326.1|DCAJ3326 Daucus carota mRNA for DNA topoisomerase I	98	2e-17
10	gb|U60440.1|DCU60440 Daucus carota topoisomerase I (Top1) mRNA, ...	70	6e-09
11	ref|NM_124912.2| Arabidopsis thaliana DNA binding / DNA topoisom...	66	9e-08
12	gb|AY090993.1| Arabidopsis thaliana putative DNA topoisomerase I...	66	9e-08
13	emb|X57544.1|ATTOP1 A.thaliana TOP1 mRNA for topoisomerase I	66	9e-08
14	dbj|AK221851.1| Arabidopsis thaliana mRNA for DNA topoisomerase ...	66	9e-08
15	dbj|AK221766.1| Arabidopsis thaliana mRNA for DNA topoisomerase ...	66	9e-08
16	dbj|AB015479.1| Arabidopsis thaliana genomic DNA, chromosome 5, ...	66	9e-08
17	ref|NM_124913.2| Arabidopsis thaliana TOP1 (TOPOISOMERASE I) AT5...	60	5e-06
18	gb|AY080864.1| Arabidopsis thaliana putative DNA topoisomerase I...	60	5e-06
19	dbj|AP006084.1| Lotus japonicus genomic DNA, chromosome 3, clone...	60	5e-06
20	emb|AL161565.2|ATCHRIV65 Arabidopsis thaliana DNA chromosome 4, ...	58	2e-05
21	emb|AL035440.2|ATF10M23 Arabidopsis thaliana DNA chromosome 4, B...	58	2e-05
22	emb|Y14558.1|PSY14558 Pisum sativum mRNA for topoisomerase I	46	0.081
23	gb|AC101738.16| Mus musculus chromosome 1, clone RP23-472N5, com...	44	0.32
24	gb|AC162299.6| Mus musculus chromosome 1, clone RP24-320H7, comp...	44	0.32
25	emb|AL353739.4| Human DNA sequence from clone RP11-19D15 on chro...	42	1.3
26	gb|AC105101.8| Homo sapiens chromosome 18, clone RP11-246E12, co...	42	1.3
27	gb|AC171263.1| Pan troglodytes chromosome X clone PTB-018K13 map...	40	5.0
28	emb|CR318646.27| Zebrafish DNA sequence from clone DKEY-83F18 in...	40	5.0
29	emb|BX664743.23| Zebrafish DNA sequence from clone DKEY-11D20 in...	40	5.0
30	gb|AE014305.1| Homo sapiens chromosome 13q34 schizophrenia regio...	40	5.0
31	emb|BX510909.19| Zebrafish DNA sequence from clone DKEY-195E19 i...	40	5.0
32	emb|CR846087.30| Zebrafish DNA sequence from clone DKEY-196N19 i...	40	5.0
33	emb|AL596132.7| Human DNA sequence from clone RP11-30A1 on chrom...	40	5.0
34	emb|AL353691.12| Human DNA sequence from clone RP5-1174J21 on ch...	40	5.0
35	emb|AL162717.10| Human DNA sequence from clone RP11-123H22 on ch...	40	5.0
36	emb|AL035669.43|HS885L7 Human DNA sequence from clone RP5-885L7 ...	40	5.0
37	emb|AL591172.3| Zebrafish DNA sequence from clone BUSM1-48C11 Co...	40	5.0
38	emb|CR293521.11| Zebrafish DNA sequence from clone CH211-152F22 ...	40	5.0
39	emb|BX088603.12| Zebrafish DNA sequence from clone DKEYP-44D3, c...	40	5.0
40	emb|AJ514918.2|TET514918 Tetrahymena pyriformis partial mdr1 gen...	40	5.0
41	dbj|AK123824.1| Homo sapiens cDNA FLJ41830 fis, clone NT2RI2027081	40	5.0
42	emb|BX119905.13| Zebrafish DNA sequence from clone CH211-209H17,...	40	5.0
43	gb|AC104791.3| Homo sapiens BAC clone RP11-181K12 from 4, comple...	40	5.0
44	gb|AF410901.1|AF410901 Homo sapiens neurotrophin receptor tyrosi...	40	5.0
45	gb|AF410900.1|AF410900 Homo sapiens neurotrophin receptor tyrosi...	40	5.0
46	gb|AF410898.1|AF410898 Homo sapiens clone DKFZp547L014 neurotrop...	40	5.0
47	gb|AC092017.2| Homo sapiens chromosome 1 clone RP11-543B16, comp...	40	5.0
48	emb|BX323555.10| Zebrafish DNA sequence from clone DKEY-163M14 i...	40	5.0
49	gb|AC011731.8|AC011731 Homo sapiens, clone RP11-17J14, complete ...	40	5.0
50	emb|BX321870.12| Zebrafish DNA sequence from clone RP71-42A14 in...	40	5.0
51	emb|BX004992.13| Zebrafish DNA sequence from clone CH211-120E13 ...	40	5.0
52	emb|BX927258.8| Zebrafish DNA sequence from clone CH211-279M15 i...	40	5.0
53	emb|BX088560.7| Zebrafish DNA sequence from clone DKEY-237O15 in...	40	5.0
54	emb|AJ504425.1|CGR504425 Cricetulus griseus partial mRNA for mul...	40	5.0
55	emb|CR394552.9| Zebrafish DNA sequence from clone DKEYP-109B10 i...	40	5.0
56	ref|NM_001038665.1| Canis familiaris egf-like module containing,...	40	5.0
57	ref|NM_001018066.1| Homo sapiens neurotrophic tyrosine kinase, r...	40	5.0
58	ref|NM_001018065.1| Homo sapiens neurotrophic tyrosine kinase, r...	40	5.0
59	gb|DQ227278.1| Canis familiaris EMR4 mRNA, complete cds	40	5.0
60	emb|BX936450.6| Zebrafish DNA sequence from clone CH211-232I12 i...	40	5.0
61	emb|CT476825.1| S.lycopersicum DNA sequence from clone LE_HBa-19...	40	5.0

---

>ref|XM_507134.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1066_B03.125 mRNA
          Length = 3327

 Score =  228 bits (115), Expect = 1e-56
 Identities = 236/277 (85%)
 Strand = Plus / Minus

                                                                        
Query: 93   ctcttagaatctgaaatccggctcgacatccattgcccatccaaactttgcaagaatcgn 152
            |||||| |||||||||||||| ||||| |||||||||||   ||| || ||||  |  | 
Sbjct: 3003 ctcttaaaatctgaaatccgggtcgacgtccattgcccacgaaaatttcgcaatgagtga 2944

                                                                        
Query: 153  nttgctgaaaatcttctcaatagggacttcatgggttttgcaccatgctaccgtaattct 212
             ||| ||||||||||||| || || |||||||||  |||||||||||| || ||||||||
Sbjct: 2943 tttgttgaaaatcttctcgatgggtacttcatggcgtttgcaccatgcaacagtaattct 2884

                                                                        
Query: 213  aggatcaaggtagttgatctttgatgtccctaatgccaccgtcttcaaatcctctttcga 272
             ||||||||||| ||||||||||| || |||| |||||| ||||| |||||||||||   
Sbjct: 2883 gggatcaaggtaattgatctttgaagttcctagtgccactgtctttaaatcctctttaat 2824

                                                                        
Query: 273  cttcttatccatctccattttctctatcttggtttctatctgagagatcttcttctcaat 332
            |||||||||||||||||| ||||||||||||||||| |||||||| |||||||| |||| 
Sbjct: 2823 cttcttatccatctccatcttctctatcttggtttcaatctgagatatcttcttttcaaa 2764

                                                 
Query: 333  cgcttcaggtgccaaagttctctttggcttcccatct 369
            ||||||||| |||||| |||| ||||| |||||||||
Sbjct: 2763 cgcttcaggggccaaatttctttttggtttcccatct 2727

---

>ref|XM_480154.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3327

 Score =  228 bits (115), Expect = 1e-56
 Identities = 236/277 (85%)
 Strand = Plus / Minus

                                                                        
Query: 93   ctcttagaatctgaaatccggctcgacatccattgcccatccaaactttgcaagaatcgn 152
            |||||| |||||||||||||| ||||| |||||||||||   ||| || ||||  |  | 
Sbjct: 3003 ctcttaaaatctgaaatccgggtcgacgtccattgcccacgaaaatttcgcaatgagtga 2944

                                                                        
Query: 153  nttgctgaaaatcttctcaatagggacttcatgggttttgcaccatgctaccgtaattct 212
             ||| ||||||||||||| || || |||||||||  |||||||||||| || ||||||||
Sbjct: 2943 tttgttgaaaatcttctcgatgggtacttcatggcgtttgcaccatgcaacagtaattct 2884

                                                                        
Query: 213  aggatcaaggtagttgatctttgatgtccctaatgccaccgtcttcaaatcctctttcga 272
             ||||||||||| ||||||||||| || |||| |||||| ||||| |||||||||||   
Sbjct: 2883 gggatcaaggtaattgatctttgaagttcctagtgccactgtctttaaatcctctttaat 2824

                                                                        
Query: 273  cttcttatccatctccattttctctatcttggtttctatctgagagatcttcttctcaat 332
            |||||||||||||||||| ||||||||||||||||| |||||||| |||||||| |||| 
Sbjct: 2823 cttcttatccatctccatcttctctatcttggtttcaatctgagatatcttcttttcaaa 2764

                                                 
Query: 333  cgcttcaggtgccaaagttctctttggcttcccatct 369
            ||||||||| |||||| |||| ||||| |||||||||
Sbjct: 2763 cgcttcaggggccaaatttctttttggtttcccatct 2727

---

>dbj|AK099134.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023050E19, full
            insert sequence
          Length = 3326

 Score =  228 bits (115), Expect = 1e-56
 Identities = 236/277 (85%)
 Strand = Plus / Minus

                                                                        
Query: 93   ctcttagaatctgaaatccggctcgacatccattgcccatccaaactttgcaagaatcgn 152
            |||||| |||||||||||||| ||||| |||||||||||   ||| || ||||  |  | 
Sbjct: 3002 ctcttaaaatctgaaatccgggtcgacgtccattgcccacgaaaatttcgcaatgagtga 2943

                                                                        
Query: 153  nttgctgaaaatcttctcaatagggacttcatgggttttgcaccatgctaccgtaattct 212
             ||| ||||||||||||| || || |||||||||  |||||||||||| || ||||||||
Sbjct: 2942 tttgttgaaaatcttctcgatgggtacttcatggcgtttgcaccatgcaacagtaattct 2883

                                                                        
Query: 213  aggatcaaggtagttgatctttgatgtccctaatgccaccgtcttcaaatcctctttcga 272
             ||||||||||| ||||||||||| || |||| |||||| ||||| |||||||||||   
Sbjct: 2882 gggatcaaggtaattgatctttgaagttcctagtgccactgtctttaaatcctctttaat 2823

                                                                        
Query: 273  cttcttatccatctccattttctctatcttggtttctatctgagagatcttcttctcaat 332
            |||||||||||||||||| ||||||||||||||||| |||||||| |||||||| |||| 
Sbjct: 2822 cttcttatccatctccatcttctctatcttggtttcaatctgagatatcttcttttcaaa 2763

                                                 
Query: 333  cgcttcaggtgccaaagttctctttggcttcccatct 369
            ||||||||| |||||| |||| ||||| |||||||||
Sbjct: 2762 cgcttcaggggccaaatttctttttggtttcccatct 2726

---

>dbj|AK070325.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023050A13, full
            insert sequence
          Length = 3347

 Score =  228 bits (115), Expect = 1e-56
 Identities = 236/277 (85%)
 Strand = Plus / Minus

                                                                        
Query: 93   ctcttagaatctgaaatccggctcgacatccattgcccatccaaactttgcaagaatcgn 152
            |||||| |||||||||||||| ||||| |||||||||||   ||| || ||||  |  | 
Sbjct: 3023 ctcttaaaatctgaaatccgggtcgacgtccattgcccacgaaaatttcgcaatgagtga 2964

                                                                        
Query: 153  nttgctgaaaatcttctcaatagggacttcatgggttttgcaccatgctaccgtaattct 212
             ||| ||||||||||||| || || |||||||||  |||||||||||| || ||||||||
Sbjct: 2963 tttgttgaaaatcttctcgatgggtacttcatggcgtttgcaccatgcaacagtaattct 2904

                                                                        
Query: 213  aggatcaaggtagttgatctttgatgtccctaatgccaccgtcttcaaatcctctttcga 272
             ||||||||||| ||||||||||| || |||| |||||| ||||| |||||||||||   
Sbjct: 2903 gggatcaaggtaattgatctttgaagttcctagtgccactgtctttaaatcctctttaat 2844

                                                                        
Query: 273  cttcttatccatctccattttctctatcttggtttctatctgagagatcttcttctcaat 332
            |||||||||||||||||| ||||||||||||||||| |||||||| |||||||| |||| 
Sbjct: 2843 cttcttatccatctccatcttctctatcttggtttcaatctgagatatcttcttttcaaa 2784

                                                 
Query: 333  cgcttcaggtgccaaagttctctttggcttcccatct 369
            ||||||||| |||||| |||| ||||| |||||||||
Sbjct: 2783 cgcttcaggggccaaatttctttttggtttcccatct 2747

---

>gb|BT017514.1| Zea mays clone EL01N0419B06.c mRNA sequence
          Length = 522

 Score =  168 bits (85), Expect = 8e-39
 Identities = 176/207 (85%)
 Strand = Plus / Plus

                                                                       
Query: 97  tagaatctgaaatccggctcgacatccattgcccatccaaactttgcaagaatcgnnttg 156
           ||||||||||| ||||| || || |||||||||||| |||| || || || |  |  |||
Sbjct: 287 tagaatctgaattccgggtcaacgtccattgcccatacaaatttcgcgaggagagatttg 346

                                                                       
Query: 157 ctgaaaatcttctcaatagggacttcatgggttttgcaccatgctaccgtaattctagga 216
            |||||||||||||||||||||||||||||  |||||||||||| || || |||||||||
Sbjct: 347 ttgaaaatcttctcaatagggacttcatggcgtttgcaccatgccacggttattctagga 406

                                                                       
Query: 217 tcaaggtagttgatctttgatgtccctaatgccaccgtcttcaaatcctctttcgacttc 276
           |||||||||||||||||||| || || | ||| || ||||||| |||||||||   | ||
Sbjct: 407 tcaaggtagttgatctttgacgttccaagtgcaactgtcttcagatcctcttttatcctc 466

                                      
Query: 277 ttatccatctccattttctctatcttg 303
           |||||||||||||| ||||||||||||
Sbjct: 467 ttatccatctccatcttctctatcttg 493

---

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score =  165 bits (83), Expect = 1e-37
 Identities = 146/167 (87%)
 Strand = Plus / Minus

                                                                           
Query: 165     cttctcaatagggacttcatgggttttgcaccatgctaccgtaattctaggatcaaggta 224
               |||||| || || |||||||||  |||||||||||| || |||||||| |||||||||||
Sbjct: 3135762 cttctcgatgggtacttcatggcgtttgcaccatgcaacagtaattctgggatcaaggta 3135703

                                                                           
Query: 225     gttgatctttgatgtccctaatgccaccgtcttcaaatcctctttcgacttcttatccat 284
                ||||||||||| || |||| |||||| ||||| |||||||||||   ||||||||||||
Sbjct: 3135702 attgatctttgaagttcctagtgccactgtctttaaatcctctttaatcttcttatccat 3135643

                                                              
Query: 285     ctccattttctctatcttggtttctatctgagagatcttcttctcaa 331
               |||||| ||||||||||||||||| |||||||| |||||||| ||||
Sbjct: 3135642 ctccatcttctctatcttggtttcaatctgagatatcttcttttcaa 3135596



 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 36/39 (92%)
 Strand = Plus / Minus

                                                      
Query: 93      ctcttagaatctgaaatccggctcgacatccattgccca 131
               |||||| |||||||||||||| ||||| |||||||||||
Sbjct: 3136137 ctcttaaaatctgaaatccgggtcgacgtccattgccca 3136099

---

>dbj|AP003940.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1066_B03
          Length = 115339

 Score =  165 bits (83), Expect = 1e-37
 Identities = 146/167 (87%)
 Strand = Plus / Minus

                                                                         
Query: 165   cttctcaatagggacttcatgggttttgcaccatgctaccgtaattctaggatcaaggta 224
             |||||| || || |||||||||  |||||||||||| || |||||||| |||||||||||
Sbjct: 95246 cttctcgatgggtacttcatggcgtttgcaccatgcaacagtaattctgggatcaaggta 95187

                                                                         
Query: 225   gttgatctttgatgtccctaatgccaccgtcttcaaatcctctttcgacttcttatccat 284
              ||||||||||| || |||| |||||| ||||| |||||||||||   ||||||||||||
Sbjct: 95186 attgatctttgaagttcctagtgccactgtctttaaatcctctttaatcttcttatccat 95127

                                                            
Query: 285   ctccattttctctatcttggtttctatctgagagatcttcttctcaa 331
             |||||| ||||||||||||||||| |||||||| |||||||| ||||
Sbjct: 95126 ctccatcttctctatcttggtttcaatctgagatatcttcttttcaa 95080



 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 36/39 (92%)
 Strand = Plus / Minus

                                                    
Query: 93    ctcttagaatctgaaatccggctcgacatccattgccca 131
             |||||| |||||||||||||| ||||| |||||||||||
Sbjct: 95621 ctcttaaaatctgaaatccgggtcgacgtccattgccca 95583

---

>gb|AY108535.1| Zea mays PCO135925 mRNA sequence
          Length = 1700

 Score =  153 bits (77), Expect = 5e-34
 Identities = 174/207 (84%)
 Strand = Plus / Minus

                                                                        
Query: 97   tagaatctgaaatccggctcgacatccattgcccatccaaactttgcaagaatcgnnttg 156
            ||||||||||| ||||| || || |||||||||||| |||| || || || |  |  |||
Sbjct: 1382 tagaatctgaattccgggtcaacgtccattgcccatacaaatttcgcgaggagagatttg 1323

                                                                        
Query: 157  ctgaaaatcttctcaatagggacttcatgggttttgcaccatgctaccgtaattctagga 216
             |||||||||||||||||||||||||||||  |||||||||||| || || |||||||||
Sbjct: 1322 ttgaaaatcttctcaatagggacttcatggcgtttgcaccatgccacggttattctagga 1263

                                                                        
Query: 217  tcaaggtagttgatctttgatgtccctaatgccaccgtcttcaaatcctctttcgacttc 276
            ||||| |||||||||||||| || || |  || || ||||||| |||||||||   | ||
Sbjct: 1262 tcaagatagttgatctttgacgttccaagcgcaactgtcttcagatcctcttttatcctc 1203

                                       
Query: 277  ttatccatctccattttctctatcttg 303
            |||||||||||||| ||||||||||||
Sbjct: 1202 ttatccatctccatcttctctatcttg 1176



 Score = 44.1 bits (22), Expect = 0.32
 Identities = 43/50 (86%)
 Strand = Plus / Minus

                                                              
Query: 321  cttcttctcaatcgcttcaggtgccaaagttctctttggcttcccatctg 370
            |||||| | |||||||||||| |||||  | |||||||||||||| ||||
Sbjct: 1158 cttcttttgaatcgcttcaggagccaagttcctctttggcttcccctctg 1109

---

>emb|AJ223326.1|DCAJ3326 Daucus carota mRNA for DNA topoisomerase I
          Length = 3086

 Score = 97.6 bits (49), Expect = 2e-17
 Identities = 140/171 (81%)
 Strand = Plus / Minus

                                                                        
Query: 96   ttagaatctgaaatccggctcgacatccattgcccatccaaactttgcaagaatcgnntt 155
            ||||||||||||   |||||| ||||||||||||||  |||||||||| ||||  |  ||
Sbjct: 2855 ttagaatctgaagctcggctcaacatccattgcccaggcaaactttgccagaagagactt 2796

                                                                        
Query: 156  gctgaaaatcttctcaatagggacttcatgggttttgcaccatgctaccgtaattctagg 215
            | |||| ||||||||||| || |||||||     |||||||| ||||| ||||| |||||
Sbjct: 2795 gttgaacatcttctcaatgggaacttcataccgcttgcaccaagctacggtaatcctagg 2736

                                                               
Query: 216  atcaaggtagttgatctttgatgtccctaatgccaccgtcttcaaatcctc 266
            |||||| || || || |||||||| || |||||||| || |||||||||||
Sbjct: 2735 atcaagataatttatttttgatgtacccaatgccacagttttcaaatcctc 2685

---

>gb|U60440.1|DCU60440 Daucus carota topoisomerase I (Top1) mRNA, complete cds
          Length = 2803

 Score = 69.9 bits (35), Expect = 6e-09
 Identities = 120/149 (80%)
 Strand = Plus / Minus

                                                                        
Query: 118  acatccattgcccatccaaactttgcaagaatcgnnttgctgaaaatcttctcaataggg 177
            |||||||| |||||  |||| ||||| ||||  |  ||| |||| |||||||||||||| 
Sbjct: 2625 acatccatagcccaagcaaattttgccagaagagacttgttgaatatcttctcaatagga 2566

                                                                        
Query: 178  acttcatgggttttgcaccatgctaccgtaattctaggatcaaggtagttgatctttgat 237
            || |||||    |||||||| || || ||||| |||||||||||||| || |||||||||
Sbjct: 2565 acgtcatgccgcttgcaccaagcgactgtaatcctaggatcaaggtaattaatctttgat 2506

                                         
Query: 238  gtccctaatgccaccgtcttcaaatcctc 266
            || || | |||||| || |||| ||||||
Sbjct: 2505 gtgccaagtgccacagttttcagatcctc 2477

---

>ref|NM_124912.2| Arabidopsis thaliana DNA binding / DNA topoisomerase type I AT5G55300
            mRNA, complete cds
          Length = 3089

 Score = 65.9 bits (33), Expect = 9e-08
 Identities = 69/81 (85%)
 Strand = Plus / Minus

                                                                        
Query: 189  tttgcaccatgctaccgtaattctaggatcaaggtagttgatctttgatgtccctaatgc 248
            |||||||||||| || || ||||||||||| |||||||||||||| || || || | |||
Sbjct: 2736 tttgcaccatgcaactgtgattctaggatccaggtagttgatcttagacgtgcccagtgc 2677

                                 
Query: 249  caccgtcttcaaatcctcttt 269
            ||| || ||||| ||||||||
Sbjct: 2676 cactgttttcaagtcctcttt 2656

---

>gb|AY090993.1| Arabidopsis thaliana putative DNA topoisomerase I (At5g55300) mRNA,
            partial cds
          Length = 1830

 Score = 65.9 bits (33), Expect = 9e-08
 Identities = 69/81 (85%)
 Strand = Plus / Minus

                                                                        
Query: 189  tttgcaccatgctaccgtaattctaggatcaaggtagttgatctttgatgtccctaatgc 248
            |||||||||||| || || ||||||||||| |||||||||||||| || || || | |||
Sbjct: 1444 tttgcaccatgcaactgtgattctaggatccaggtagttgatcttagacgtgcccagtgc 1385

                                 
Query: 249  caccgtcttcaaatcctcttt 269
            ||| || ||||| ||||||||
Sbjct: 1384 cactgttttcaagtcctcttt 1364

---

>emb|X57544.1|ATTOP1 A.thaliana TOP1 mRNA for topoisomerase I
          Length = 3106

 Score = 65.9 bits (33), Expect = 9e-08
 Identities = 69/81 (85%)
 Strand = Plus / Minus

                                                                        
Query: 189  tttgcaccatgctaccgtaattctaggatcaaggtagttgatctttgatgtccctaatgc 248
            |||||||||||| || || ||||||||||| |||||||||||||| || || || | |||
Sbjct: 2737 tttgcaccatgcaactgtgattctaggatccaggtagttgatcttagacgtgcccagtgc 2678

                                 
Query: 249  caccgtcttcaaatcctcttt 269
            ||| || ||||| ||||||||
Sbjct: 2677 cactgttttcaagtcctcttt 2657

---

>dbj|AK221851.1| Arabidopsis thaliana mRNA for DNA topoisomerase I, partial cds,
           clone: RAFL22-07-H10
          Length = 1078

 Score = 65.9 bits (33), Expect = 9e-08
 Identities = 69/81 (85%)
 Strand = Plus / Minus

                                                                       
Query: 189 tttgcaccatgctaccgtaattctaggatcaaggtagttgatctttgatgtccctaatgc 248
           |||||||||||| || || ||||||||||| |||||||||||||| || || || | |||
Sbjct: 713 tttgcaccatgcaactgtgattctaggatccaggtagttgatcttagacgtgcccagtgc 654

                                
Query: 249 caccgtcttcaaatcctcttt 269
           ||| || ||||| ||||||||
Sbjct: 653 cactgttttcaagtcctcttt 633

---

>dbj|AK221766.1| Arabidopsis thaliana mRNA for DNA topoisomerase I, partial cds,
            clone: RAFL21-62-I21
          Length = 1452

 Score = 65.9 bits (33), Expect = 9e-08
 Identities = 69/81 (85%)
 Strand = Plus / Minus

                                                                        
Query: 189  tttgcaccatgctaccgtaattctaggatcaaggtagttgatctttgatgtccctaatgc 248
            |||||||||||| || || ||||||||||| |||||||||||||| || || || | |||
Sbjct: 1090 tttgcaccatgcaactgtgattctaggatccaggtagttgatcttagacgtgcccagtgc 1031

                                 
Query: 249  caccgtcttcaaatcctcttt 269
            ||| || ||||| ||||||||
Sbjct: 1030 cactgttttcaagtcctcttt 1010

---

>dbj|AB015479.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MTE17
          Length = 80675

 Score = 65.9 bits (33), Expect = 9e-08
 Identities = 69/81 (85%)
 Strand = Plus / Plus

                                                                       
Query: 189 tttgcaccatgctaccgtaattctaggatcaaggtagttgatctttgatgtccctaatgc 248
           |||||||||||| || || ||||||||||| |||||||||||||| || || || | |||
Sbjct: 820 tttgcaccatgcaactgtgattctaggatccaggtagttgatcttagacgtgcccagtgc 879

                                
Query: 249 caccgtcttcaaatcctcttt 269
           ||| || ||||| ||||||||
Sbjct: 880 cactgttttcaagtcctcttt 900



 Score = 50.1 bits (25), Expect = 0.005
 Identities = 85/105 (80%)
 Strand = Plus / Plus

                                                                        
Query: 165  cttctcaatagggacttcatgggttttgcaccatgctaccgtaattctaggatcaaggta 224
            ||||||||| ||||| |||||   ||||||||| || || || || |||||||| | |||
Sbjct: 6349 cttctcaatggggacatcatgtcgtttgcaccacgcaacagtgatcctaggatccatgta 6408

                                                         
Query: 225  gttgatctttgatgtccctaatgccaccgtcttcaaatcctcttt 269
            ||||||||| ||||| || ||||| || || |||| ||| |||||
Sbjct: 6409 gttgatcttagatgtgcccaatgcgacagttttcatatcttcttt 6453

---

>ref|NM_124913.2| Arabidopsis thaliana TOP1 (TOPOISOMERASE I) AT5G55310 (TOP1) mRNA,
            complete cds
          Length = 2838

 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 136/172 (79%)
 Strand = Plus / Minus

                                                                        
Query: 98   agaatctgaaatccggctcgacatccattgcccatccaaactttgcaagaatcgnnttgc 157
            |||||||||| || || || ||||||||||||||  | ||||| || ||||  |  ||| 
Sbjct: 2818 agaatctgaactcaggatcaacatccattgcccaagcgaacttagccagaagagacttgt 2759

                                                                        
Query: 158  tgaaaatcttctcaatagggacttcatgggttttgcaccatgctaccgtaattctaggat 217
            | || ||||||||||| ||||| |||||   ||||||||| || || || || |||||||
Sbjct: 2758 taaatatcttctcaatggggacatcatgtcgtttgcaccacgcaacagtgatcctaggat 2699

                                                                
Query: 218  caaggtagttgatctttgatgtccctaatgccaccgtcttcaaatcctcttt 269
            | | |||||||||||| ||||| || ||||| || || |||| ||| |||||
Sbjct: 2698 ccatgtagttgatcttagatgtgcccaatgcgacagttttcatatcttcttt 2647

---

>gb|AY080864.1| Arabidopsis thaliana putative DNA topoisomerase I (At5g55310) mRNA,
           partial cds
          Length = 928

 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 136/172 (79%)
 Strand = Plus / Minus

                                                                       
Query: 98  agaatctgaaatccggctcgacatccattgcccatccaaactttgcaagaatcgnnttgc 157
           |||||||||| || || || ||||||||||||||  | ||||| || ||||  |  ||| 
Sbjct: 681 agaatctgaactcaggatcaacatccattgcccaagcgaacttagccagaagagacttgt 622

                                                                       
Query: 158 tgaaaatcttctcaatagggacttcatgggttttgcaccatgctaccgtaattctaggat 217
           | || ||||||||||| ||||| |||||   ||||||||| || || || || |||||||
Sbjct: 621 taaatatcttctcaatggggacatcatgtcgtttgcaccacgcaacagtgatcctaggat 562

                                                               
Query: 218 caaggtagttgatctttgatgtccctaatgccaccgtcttcaaatcctcttt 269
           | | |||||||||||| ||||| || ||||| || || |||| ||| |||||
Sbjct: 561 ccatgtagttgatcttagatgtgcccaatgcgacagttttcatatcttcttt 510

---

>dbj|AP006084.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT44D21, TM0127b,
             complete sequence
          Length = 95169

 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 54/62 (87%)
 Strand = Plus / Minus

                                                                         
Query: 190   ttgcaccatgctaccgtaattctaggatcaaggtagttgatctttgatgtccctaatgcc 249
             |||||||| || || ||||| || |||||||||||||| ||||| ||||| |||||||||
Sbjct: 27679 ttgcaccaggcgactgtaatcctgggatcaaggtagtttatcttggatgtgcctaatgcc 27620

               
Query: 250   ac 251
             ||
Sbjct: 27619 ac 27618

---

>emb|AL161565.2|ATCHRIV65 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 65
          Length = 198320

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 68/81 (83%)
 Strand = Plus / Minus

                                                                          
Query: 189    tttgcaccatgctaccgtaattctaggatcaaggtagttgatctttgatgtccctaatgc 248
              |||||||||||| ||||| || |||||||| | |||||||||||| || || || || ||
Sbjct: 165037 tttgcaccatgcgaccgtgatcctaggatccatgtagttgatcttagaggtgcccaacgc 164978

                                   
Query: 249    caccgtcttcaaatcctcttt 269
              ||| || ||||| ||||||||
Sbjct: 164977 cacggttttcaagtcctcttt 164957

---

>emb|AL035440.2|ATF10M23 Arabidopsis thaliana DNA chromosome 4, BAC clone F10M23 (ESSA project)
          Length = 128574

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 68/81 (83%)
 Strand = Plus / Minus

                                                                         
Query: 189   tttgcaccatgctaccgtaattctaggatcaaggtagttgatctttgatgtccctaatgc 248
             |||||||||||| ||||| || |||||||| | |||||||||||| || || || || ||
Sbjct: 15874 tttgcaccatgcgaccgtgatcctaggatccatgtagttgatcttagaggtgcccaacgc 15815

                                  
Query: 249   caccgtcttcaaatcctcttt 269
             ||| || ||||| ||||||||
Sbjct: 15814 cacggttttcaagtcctcttt 15794

---

>emb|Y14558.1|PSY14558 Pisum sativum mRNA for topoisomerase I
          Length = 3055

 Score = 46.1 bits (23), Expect = 0.081
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                           
Query: 98   agaatctgaaatccggctcgacatccattgcccatccaaactttgca 144
            ||||||||||||| || || ||||||||||||||  |||| ||||||
Sbjct: 2838 agaatctgaaatctgggtccacatccattgcccaagcaaattttgca 2792

---

>gb|AC101738.16| Mus musculus chromosome 1, clone RP23-472N5, complete sequence
          Length = 183026

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 83     gaatccaatactcttagaatct 104
              ||||||||||||||||||||||
Sbjct: 125538 gaatccaatactcttagaatct 125559

---

>gb|AC162299.6| Mus musculus chromosome 1, clone RP24-320H7, complete sequence
          Length = 130226

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 83    gaatccaatactcttagaatct 104
             ||||||||||||||||||||||
Sbjct: 14940 gaatccaatactcttagaatct 14961

---

>emb|AL353739.4| Human DNA sequence from clone RP11-19D15 on chromosome 20 Contains STSs
             and GSSs, complete sequence
          Length = 101388

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 278   tatccatctccattttctcta 298
             |||||||||||||||||||||
Sbjct: 76687 tatccatctccattttctcta 76707

---

>gb|AC105101.8| Homo sapiens chromosome 18, clone RP11-246E12, complete sequence
          Length = 172626

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 352   ctctttggcttcccatctgca 372
             |||||||||||||||||||||
Sbjct: 90356 ctctttggcttcccatctgca 90376

---

>gb|AC171263.1| Pan troglodytes chromosome X clone PTB-018K13 map human ortholog p11.4,
              complete sequence
          Length = 147595

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 350    ttctctttggcttcccatct 369
              ||||||||||||||||||||
Sbjct: 137338 ttctctttggcttcccatct 137357

---

>emb|CR318646.27| Zebrafish DNA sequence from clone DKEY-83F18 in linkage group 22,
             complete sequence
          Length = 224271

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 19    ttaggtgtccgggagaaggc 38
             ||||||||||||||||||||
Sbjct: 72185 ttaggtgtccgggagaaggc 72166

---

>emb|BX664743.23| Zebrafish DNA sequence from clone DKEY-11D20 in linkage group 22,
             complete sequence
          Length = 180012

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 19    ttaggtgtccgggagaaggc 38
             ||||||||||||||||||||
Sbjct: 14054 ttaggtgtccgggagaaggc 14073

---

>gb|AE014305.1| Homo sapiens chromosome 13q34 schizophrenia region contig 1 section 2 of
              11 of the complete sequence
          Length = 613322

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 280    tccatctccattttctctat 299
              ||||||||||||||||||||
Sbjct: 126529 tccatctccattttctctat 126510

---

>emb|BX510909.19| Zebrafish DNA sequence from clone DKEY-195E19 in linkage group 5,
              complete sequence
          Length = 190731

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 19     ttaggtgtccgggagaaggc 38
              ||||||||||||||||||||
Sbjct: 165287 ttaggtgtccgggagaaggc 165306

---

>emb|CR846087.30| Zebrafish DNA sequence from clone DKEY-196N19 in linkage group 8,
              complete sequence
          Length = 232595

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 19     ttaggtgtccgggagaaggc 38
              ||||||||||||||||||||
Sbjct: 192766 ttaggtgtccgggagaaggc 192785

---

>emb|AL596132.7| Human DNA sequence from clone RP11-30A1 on chromosome 9 Contains part
             of the NTRK2 gene for Neurotrophic tyrosine kinase,
             receptor, type 2 (TRKB), complete sequence
          Length = 124156

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 288   cattttctctatcttggttt 307
             ||||||||||||||||||||
Sbjct: 56483 cattttctctatcttggttt 56502

---

>emb|AL353691.12| Human DNA sequence from clone RP5-1174J21 on chromosome Xp11.3-21.2
             Contains part of the CASK gene for
             calcium/calmodulin-dependent serine protein kinase (MAGUK
             family) and a ribosomal protein S15a (RPS15A) pseudogene,
             complete sequence
          Length = 106605

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 350   ttctctttggcttcccatct 369
             ||||||||||||||||||||
Sbjct: 15327 ttctctttggcttcccatct 15346

---

>emb|AL162717.10| Human DNA sequence from clone RP11-123H22 on chromosome 13q14.2-21.2
            Contains a novel gene, complete sequence
          Length = 153859

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 280  tccatctccattttctctat 299
            ||||||||||||||||||||
Sbjct: 6111 tccatctccattttctctat 6092

---

>emb|AL035669.43|HS885L7 Human DNA sequence from clone RP5-885L7 on chromosome 20q13.2-13.33
             Contains the 3' end of the NTSR1 gene for high affinity
             neurotensin receptor 1, the C20orf20 gene, the OGFR gene
             for opioid growth factor receptor, the COL9A3 gene for
             collagen IX alpha 3, the C20orf143 gene, the TCFL5 gene
             for basic helix-loop-helix transcription factor-like 5,
             the ARF4P2 gene for ADP-ribosylation factor 4 pseudogene
             2, the 3' end of the DATF1 gene for death associated
             transcription factor 1, two novel genes and seven CpG
             islands, complete sequence
          Length = 160241

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 23    gtgtccgggagaaggcctggaagc 46
             ||||| ||||||||||||||||||
Sbjct: 27939 gtgtctgggagaaggcctggaagc 27962

---

>emb|AL591172.3| Zebrafish DNA sequence from clone BUSM1-48C11 Contains two novel genes,
             two novel genes for a proteins similar to MHC class II
             alpha and beta chain, the putative novel transposon LDR1
             and three CpG islands, complete sequence
          Length = 106049

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 19    ttaggtgtccgggagaaggc 38
             ||||||||||||||||||||
Sbjct: 79439 ttaggtgtccgggagaaggc 79420

---

>emb|CR293521.11| Zebrafish DNA sequence from clone CH211-152F22 in linkage group 12,
             complete sequence
          Length = 152631

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 19    ttaggtgtccgggagaaggc 38
             ||||||||||||||||||||
Sbjct: 22495 ttaggtgtccgggagaaggc 22514

---

>emb|BX088603.12| Zebrafish DNA sequence from clone DKEYP-44D3, complete sequence
          Length = 177056

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 19    ttaggtgtccgggagaaggc 38
             ||||||||||||||||||||
Sbjct: 22439 ttaggtgtccgggagaaggc 22420

---

>emb|AJ514918.2|TET514918 Tetrahymena pyriformis partial mdr1 gene for putative P-glycoprotein
          Length = 3048

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 284  tctccattttctctatcttg 303
            ||||||||||||||||||||
Sbjct: 2117 tctccattttctctatcttg 2136

---

>dbj|AK123824.1| Homo sapiens cDNA FLJ41830 fis, clone NT2RI2027081
          Length = 1842

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 288 cattttctctatcttggttt 307
           ||||||||||||||||||||
Sbjct: 530 cattttctctatcttggttt 549

---

>emb|BX119905.13| Zebrafish DNA sequence from clone CH211-209H17, complete sequence
          Length = 50366

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 19   ttaggtgtccgggagaaggc 38
            ||||||||||||||||||||
Sbjct: 3014 ttaggtgtccgggagaaggc 2995

---

>gb|AC104791.3| Homo sapiens BAC clone RP11-181K12 from 4, complete sequence
          Length = 159969

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 287   ccattttctctatcttggtt 306
             ||||||||||||||||||||
Sbjct: 17662 ccattttctctatcttggtt 17643

---

>gb|AF410901.1|AF410901 Homo sapiens neurotrophin receptor tyrosine kinase type 2 truncated
            isoform (NTRK2) mRNA, complete cds; alternatively spliced
          Length = 8240

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 288  cattttctctatcttggttt 307
            ||||||||||||||||||||
Sbjct: 6911 cattttctctatcttggttt 6930

---

>gb|AF410900.1|AF410900 Homo sapiens neurotrophin receptor tyrosine kinase type 2 truncated
            isoform (NTRK2) mRNA, complete cds; alternatively spliced
          Length = 8192

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 288  cattttctctatcttggttt 307
            ||||||||||||||||||||
Sbjct: 6863 cattttctctatcttggttt 6882

---

>gb|AF410898.1|AF410898 Homo sapiens clone DKFZp547L014 neurotrophin receptor tyrosine kinase
            type 2 truncated isoform (NTRK2) mRNA, partial cds;
            alternatively spliced
          Length = 6422

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 288  cattttctctatcttggttt 307
            ||||||||||||||||||||
Sbjct: 5093 cattttctctatcttggttt 5112

---

>gb|AC092017.2| Homo sapiens chromosome 1 clone RP11-543B16, complete sequence
          Length = 193041

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 298    atcttggtttctatctgaga 317
              ||||||||||||||||||||
Sbjct: 110192 atcttggtttctatctgaga 110173

---

>emb|BX323555.10| Zebrafish DNA sequence from clone DKEY-163M14 in linkage group 21,
              complete sequence
          Length = 180416

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 19     ttaggtgtccgggagaaggc 38
              ||||||||||||||||||||
Sbjct: 109378 ttaggtgtccgggagaaggc 109359

---

>gb|AC011731.8|AC011731 Homo sapiens, clone RP11-17J14, complete sequence
          Length = 157183

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 162   aatcttctcaatagggactt 181
             ||||||||||||||||||||
Sbjct: 77018 aatcttctcaatagggactt 77037

---

>emb|BX321870.12| Zebrafish DNA sequence from clone RP71-42A14 in linkage group 22,
             complete sequence
          Length = 165445

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 19    ttaggtgtccgggagaaggc 38
             ||||||||||||||||||||
Sbjct: 64351 ttaggtgtccgggagaaggc 64332

---

>emb|BX004992.13| Zebrafish DNA sequence from clone CH211-120E13 in linkage group 16,
             complete sequence
          Length = 195432

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 19    ttaggtgtccgggagaaggc 38
             ||||||||||||||||||||
Sbjct: 47392 ttaggtgtccgggagaaggc 47411

---

>emb|BX927258.8| Zebrafish DNA sequence from clone CH211-279M15 in linkage group 20,
             complete sequence
          Length = 146407

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 19    ttaggtgtccgggagaaggc 38
             ||||||||||||||||||||
Sbjct: 91527 ttaggtgtccgggagaaggc 91546

---

>emb|BX088560.7| Zebrafish DNA sequence from clone DKEY-237O15 in linkage group 10,
             complete sequence
          Length = 156486

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 19    ttaggtgtccgggagaaggc 38
             ||||||||||||||||||||
Sbjct: 24363 ttaggtgtccgggagaaggc 24344

---

>emb|AJ504425.1|CGR504425 Cricetulus griseus partial mRNA for multidrug resistance-associated
           protein 1 (abcc1 gene)
          Length = 683

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 30  ggagaaggcctggaagctga 49
           ||||||||||||||||||||
Sbjct: 265 ggagaaggcctggaagctga 284

---

>emb|CR394552.9| Zebrafish DNA sequence from clone DKEYP-109B10 in linkage group 25,
              complete sequence
          Length = 196037

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 19     ttaggtgtccgggagaaggc 38
              ||||||||||||||||||||
Sbjct: 185657 ttaggtgtccgggagaaggc 185676

---

>ref|NM_001038665.1| Canis familiaris egf-like module containing, mucin-like, hormone
            receptor-like 4 (EMR4), mRNA
          Length = 2197

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 290  ttttctctatcttggtttctatct 313
            ||||||||||||||| ||||||||
Sbjct: 2079 ttttctctatcttggcttctatct 2102

---

>ref|NM_001018066.1| Homo sapiens neurotrophic tyrosine kinase, receptor, type 2 (NTRK2),
            transcript variant e, mRNA
          Length = 8648

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 288  cattttctctatcttggttt 307
            ||||||||||||||||||||
Sbjct: 7319 cattttctctatcttggttt 7338

---

>ref|NM_001018065.1| Homo sapiens neurotrophic tyrosine kinase, receptor, type 2 (NTRK2),
            transcript variant d, mRNA
          Length = 8696

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 288  cattttctctatcttggttt 307
            ||||||||||||||||||||
Sbjct: 7367 cattttctctatcttggttt 7386

---

>gb|DQ227278.1| Canis familiaris EMR4 mRNA, complete cds
          Length = 2197

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 290  ttttctctatcttggtttctatct 313
            ||||||||||||||| ||||||||
Sbjct: 2079 ttttctctatcttggcttctatct 2102

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>emb|BX936450.6| Zebrafish DNA sequence from clone CH211-232I12 in linkage group 17,
              complete sequence
          Length = 167918

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 19     ttaggtgtccgggagaaggc 38
              ||||||||||||||||||||
Sbjct: 117478 ttaggtgtccgggagaaggc 117459

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>emb|CT476825.1| S.lycopersicum DNA sequence from clone LE_HBa-198L24 on chromosome 4,
             complete sequence
          Length = 160432

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 318   gatcttcttctcaatcgctt 337
             ||||||||||||||||||||
Sbjct: 40887 gatcttcttctcaatcgctt 40906


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,178,337
Number of Sequences: 3902068
Number of extensions: 3178337
Number of successful extensions: 59219
Number of sequences better than 10.0: 61
Number of HSP's better than 10.0 without gapping: 61
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 59082
Number of HSP's gapped (non-prelim): 130
length of query: 375
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 353
effective length of database: 17,147,199,772
effective search space: 6052961519516
effective search space used: 6052961519516
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

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