ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd2j15
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY781348.1| Triticum aestivum USP family protein mRNA, comple... 620 e-174
2ref|XM_475607.1| Oryza sativa (japonica cultivar-group), predic... 212 9e-52
3dbj|AK065771.1| Oryza sativa (japonica cultivar-group) cDNA clon... 212 9e-52
4dbj|AK103075.1| Oryza sativa (japonica cultivar-group) cDNA clon... 204 2e-49
5gb|BT017342.1| Zea mays clone EL01N0323A01.c mRNA sequence 149 1e-32
6gb|AY596596.1| Saccharum officinarum clone SCCCLR1072E04, comple... 141 3e-30
7gb|AY107821.1| Zea mays PCO148543 mRNA sequence 109 1e-20
8dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 107 4e-20
9gb|AC087425.2| Oryza sativa (japonica cultivar-group) chromosome... 107 4e-20
10gb|BT019453.1| Homo sapiens v-ets erythroblastosis virus E26 onc... 42 2.0
11gb|BT019452.1| Homo sapiens v-ets erythroblastosis virus E26 onc... 42 2.0
12gb|AE009171.1| Agrobacterium tumefaciens str. C58 circular chrom... 42 2.0
13gb|BC017314.2| Homo sapiens v-ets erythroblastosis virus E26 onc... 42 2.0
14emb|AL590550.8| Human DNA sequence from clone RP11-398B19 on chr... 42 2.0
15emb|BX640634.1|HSM806680 Homo sapiens mRNA; cDNA DKFZp686D0662 (... 42 2.0
16ref|NM_005238.2| Homo sapiens v-ets erythroblastosis virus E26 o... 42 2.0
17gb|AE007869.1| Agrobacterium tumefaciens str. C58, complete genome 42 2.0
18emb|CR542254.1| Homo sapiens full open reading frame cDNA clone ... 42 2.0
19gb|AY890388.1| Synthetic construct Homo sapiens clone FLH018852.... 42 2.0
20gb|AY888523.1| Synthetic construct Homo sapiens clone FLH008825.... 42 2.0
21gb|AY888522.1| Synthetic construct Homo sapiens clone FLH008824.... 42 2.0
22gb|AY893897.1| Synthetic construct Homo sapiens clone FLH127901.... 42 2.0
23gb|AY893450.1| Synthetic construct Homo sapiens clone FLH127819.... 42 2.0
24gb|AY893377.1| Synthetic construct Homo sapiens clone FLH131104.... 42 2.0
25gb|AY892857.1| Synthetic construct Homo sapiens clone FLH018848.... 42 2.0
26gb|J04101.1|HUMETS1A Human erythroblastosis virus oncogene homol... 42 2.0
27emb|X14798.1|HSCETS1 Human DNA for c-ets-1 proto-oncogene 42 2.0
28gb|AC154009.1| Mus musculus 6 NOVECTOR RP24-544G1 (Roswell Park ... 40 7.7
29gb|AC152185.1| Medicago truncatula chromosome 2 BAC clone mth2-9... 40 7.7
30gb|AY242824.1| Afipia felis strain B-91-007352 RNA polymerase be... 40 7.7
31gb|AC149542.1| Populus trichocarpa clone Pop1-2C5, complete sequ... 40 7.7
32gb|AC125330.5| Mus musculus BAC clone RP23-217A6 from chromosome... 40 7.7
33gb|AE014311.1| Homo sapiens chromosome 13q34 schizophrenia regio... 40 7.7
34gb|AC144539.7| Medicago truncatula clone mth2-11o10, complete se... 40 7.7
35emb|AL732414.17| Human DNA sequence from clone RP11-423F24 on ch... 40 7.7
36emb|AL356461.15| Human DNA sequence from clone RP11-180D15 on ch... 40 7.7
37gb|AC117489.3| Homo sapiens 3 BAC CTD-2006M22 (CalTech BAC Libra... 40 7.7
38gb|AC119731.3| Homo sapiens 3 BAC RP11-135O2 (Roswell Park Cance... 40 7.7
39ref|XM_687926.1| PREDICTED: Danio rerio similar to polyA polymer... 40 7.7
40gb|AC008195.6|AC008195 Drosophila melanogaster, chromosome 3R, r... 40 7.7
41gb|AE003736.3| Drosophila melanogaster chromosome 3R, section 74... 40 7.7
42gb|AC120132.11| Mus musculus chromosome 6, clone RP23-105D1, com... 40 7.7
43gb|L07144.3| Caenorhabditis elegans cosmid R05D3, complete sequence 40 7.7
44emb|AL626783.16| Mouse DNA sequence from clone RP23-406B13 on ch... 40 7.7 
>gb|AY781348.1| Triticum aestivum USP family protein mRNA, complete cds
          Length = 902

 Score =  620 bits (313), Expect = e-174
 Identities = 484/538 (89%), Gaps = 16/538 (2%)
 Strand = Plus / Minus

                                                                       
Query: 43  atgcagcaaacagcagcacggactgactcacggtgcaaaagttaggctgaagagaagcac 102
           ||||| |||||||||||||||||||||||| || ||||||| ||||||||||| ||||||
Sbjct: 831 atgcaacaaacagcagcacggactgactcatggagcaaaagctaggctgaagataagcac 772

                                                                       
Query: 103 acaa---------acgtacacgacacatgcacagattacaca-acctgggaatcatccgc 152
           ||||         | ||||| ||||||||||||||||||||| ||||||||||||||| |
Sbjct: 771 acaaatgtacaggatgtacaggacacatgcacagattacacacacctgggaatcatccac 712

                                                                       
Query: 153 gggctaattgtcaatcattattacaaacaacaacactgcatggttcaataagttgcagcc 212
            |||||||||||||| ||||||||||| ||||   ||| ||||||||||||||||| |||
Sbjct: 711 aggctaattgtcaattattattacaaataaca---ctggatggttcaataagttgcggcc 655

                                                                       
Query: 213 atgactggatatataggactcaa-caaactaaaccagatgaggatattttcgatgacgag 271
           |  ||||||||||||||||||   ||||||||| || ||| ||| |||| |||||| |||
Sbjct: 654 a--actggatatataggactctggcaaactaaaacacatgtggacatttgcgatgatgag 597

                                                                       
Query: 272 atcaggcatgggtgctcgctggcttgacaacggtgaccgggcacgcggcgttgttcacga 331
           ||||||||||| | ||||||||||||||||||||||| ||||| ||||| ||||||||||
Sbjct: 596 atcaggcatggttactcgctggcttgacaacggtgacagggcaggcggcattgttcacga 537

                                                                       
Query: 332 cgtaatcgctgacactgcccaagagcaccctcttgagcttgccaaggcccctgctcccaa 391
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 536 cgtaatcgctgacgctgcccaagagcaccctcttgagcttgccaaggcccctgctcccaa 477

                                                                       
Query: 392 tgaccaggcagctgatgggcatgtcatggatggcttggcatagcttctcgcggggatctc 451
           |||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 476 tgaccagggagctgatgggcatgtcatggatggcttggcacagcttctcgcggggatctc 417

                                                                       
Query: 452 caaacaggactttggaaaccacggcaacctccttctgcttagctatggtgttgagcatgt 511
           ||||||||||||| ||||||||||  |||||||||||||||||||| |||||||||||||
Sbjct: 416 caaacaggacttttgaaaccacggagacctccttctgcttagctatagtgttgagcatgt 357

                                                                     
Query: 512 ccagtgtttcagcatcaggcttcaccccatatttctttgcgaccgaagggtgagagaa 569
           |||| |||||||||||||||||||||||||||||||||||    ||||||||||||||
Sbjct: 356 ccagcgtttcagcatcaggcttcaccccatatttctttgcagttgaagggtgagagaa 299
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>ref|XM_475607.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 504

 Score =  212 bits (107), Expect = 9e-52
 Identities = 224/263 (85%)
 Strand = Plus / Minus

                                                                       
Query: 289 gctggcttgacaacggtgaccgggcacgcggcgttgttcacgacgtaatcgctgacactg 348
           |||| ||||||||| ||||| ||||| | |||||||||||||||||| |||||||| || 
Sbjct: 494 gctgtcttgacaactgtgactgggcaagtggcgttgttcacgacgtagtcgctgacgcta 435

                                                                       
Query: 349 cccaagagcaccctcttgagcttgccaaggcccctgctcccaatgaccaggcagctgatg 408
           || || |||||||||||||| |||||||| |||||||| ||||| |||| |||||| |||
Sbjct: 434 cctaacagcaccctcttgagtttgccaagacccctgcttccaataaccaagcagctcatg 375

                                                                       
Query: 409 ggcatgtcatggatggcttggcatagcttctcgcggggatctccaaacaggactttggaa 468
           || || || | ||||||||||||||||||||| |||||||||||  | ||||||||| ||
Sbjct: 374 gggatttcgttgatggcttggcatagcttctcacggggatctccccaaaggactttgaaa 315

                                                                       
Query: 469 accacggcaacctccttctgcttagctatggtgttgagcatgtccagtgtttcagcatca 528
           |||||  |||||||||||||| | || |  || || |||||||||| |||||| ||||||
Sbjct: 314 accaccacaacctccttctgcctggccacagtattaagcatgtccaatgtttcggcatca 255

                                  
Query: 529 ggcttcaccccatatttctttgc 551
           |||||  | ||||||||||||||
Sbjct: 254 ggctttgctccatatttctttgc 232
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>dbj|AK065771.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013041K03, full
           insert sequence
          Length = 777

 Score =  212 bits (107), Expect = 9e-52
 Identities = 224/263 (85%)
 Strand = Plus / Minus

                                                                       
Query: 289 gctggcttgacaacggtgaccgggcacgcggcgttgttcacgacgtaatcgctgacactg 348
           |||| ||||||||| ||||| ||||| | |||||||||||||||||| |||||||| || 
Sbjct: 582 gctgtcttgacaactgtgactgggcaagtggcgttgttcacgacgtagtcgctgacgcta 523

                                                                       
Query: 349 cccaagagcaccctcttgagcttgccaaggcccctgctcccaatgaccaggcagctgatg 408
           || || |||||||||||||| |||||||| |||||||| ||||| |||| |||||| |||
Sbjct: 522 cctaacagcaccctcttgagtttgccaagacccctgcttccaataaccaagcagctcatg 463

                                                                       
Query: 409 ggcatgtcatggatggcttggcatagcttctcgcggggatctccaaacaggactttggaa 468
           || || || | ||||||||||||||||||||| |||||||||||  | ||||||||| ||
Sbjct: 462 gggatttcgttgatggcttggcatagcttctcacggggatctccccaaaggactttgaaa 403

                                                                       
Query: 469 accacggcaacctccttctgcttagctatggtgttgagcatgtccagtgtttcagcatca 528
           |||||  |||||||||||||| | || |  || || |||||||||| |||||| ||||||
Sbjct: 402 accaccacaacctccttctgcctggccacagtattaagcatgtccaatgtttcggcatca 343

                                  
Query: 529 ggcttcaccccatatttctttgc 551
           |||||  | ||||||||||||||
Sbjct: 342 ggctttgctccatatttctttgc 320
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>dbj|AK103075.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033118C16, full
           insert sequence
          Length = 780

 Score =  204 bits (103), Expect = 2e-49
 Identities = 223/263 (84%)
 Strand = Plus / Minus

                                                                       
Query: 289 gctggcttgacaacggtgaccgggcacgcggcgttgttcacgacgtaatcgctgacactg 348
           |||| ||||||||| ||||| ||||| | |||||||||||||||||| |||||||| || 
Sbjct: 582 gctgtcttgacaactgtgactgggcaagtggcgttgttcacgacgtagtcgctgacgcta 523

                                                                       
Query: 349 cccaagagcaccctcttgagcttgccaaggcccctgctcccaatgaccaggcagctgatg 408
           || || |||||||||||||| |||||||| |||||||| ||||| |||| |||||| |||
Sbjct: 522 cctaacagcaccctcttgagtttgccaagacccctgcttccaataaccaagcagctcatg 463

                                                                       
Query: 409 ggcatgtcatggatggcttggcatagcttctcgcggggatctccaaacaggactttggaa 468
           || || || | ||||||||||||||| ||||| |||||||||||  | ||||||||| ||
Sbjct: 462 gggatttcgttgatggcttggcatagtttctcacggggatctccccaaaggactttgaaa 403

                                                                       
Query: 469 accacggcaacctccttctgcttagctatggtgttgagcatgtccagtgtttcagcatca 528
           |||||  |||||||||||||| | || |  || || |||||||||| |||||| ||||||
Sbjct: 402 accaccacaacctccttctgcctggccacagtattaagcatgtccaatgtttcggcatca 343

                                  
Query: 529 ggcttcaccccatatttctttgc 551
           |||||  | ||||||||||||||
Sbjct: 342 ggctttgctccatatttctttgc 320
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>gb|BT017342.1| Zea mays clone EL01N0323A01.c mRNA sequence
          Length = 525

 Score =  149 bits (75), Expect = 1e-32
 Identities = 147/171 (85%)
 Strand = Plus / Minus

                                                                       
Query: 294 cttgacaacggtgaccgggcacgcggcgttgttcacgacgtaatcgctgacactgcccaa 353
           ||||||||||||||| ||||| |  ||||||||||||||||||||||||||||| || ||
Sbjct: 329 cttgacaacggtgacagggcaggttgcgttgttcacgacgtaatcgctgacacttcctaa 270

                                                                       
Query: 354 gagcaccctcttgagcttgccaaggcccctgctcccaatgaccaggcagctgatgggcat 413
           ||||||||||||||| ||||||||||||||||| || || |||| |||||| |  ||  |
Sbjct: 269 gagcaccctcttgagtttgccaaggcccctgcttcctataaccaagcagctcaacggggt 210

                                                              
Query: 414 gtcatggatggcttggcatagcttctcgcggggatctccaaacaggacttt 464
           |||||||||  |||| || |||||||| || ||||||||  ||||||||||
Sbjct: 209 gtcatggataacttgacagagcttctcacgcggatctccccacaggacttt 159
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>gb|AY596596.1| Saccharum officinarum clone SCCCLR1072E04, complete sequence
          Length = 821

 Score =  141 bits (71), Expect = 3e-30
 Identities = 146/171 (85%)
 Strand = Plus / Minus

                                                                       
Query: 294 cttgacaacggtgaccgggcacgcggcgttgttcacgacgtaatcgctgacactgcccaa 353
           |||||| |||||||| ||||| |  |||||||||||||| || ||||||||||| |||||
Sbjct: 570 cttgacgacggtgacagggcaggttgcgttgttcacgacatagtcgctgacacttcccaa 511

                                                                       
Query: 354 gagcaccctcttgagcttgccaaggcccctgctcccaatgaccaggcagctgatgggcat 413
           ||||||||||||||||||||||||||||||||| || || |||| |||||| |  ||  |
Sbjct: 510 gagcaccctcttgagcttgccaaggcccctgcttcctataaccaagcagctcaacggggt 451

                                                              
Query: 414 gtcatggatggcttggcatagcttctcgcggggatctccaaacaggacttt 464
           |||||||||  |||| || |||||||| || ||||||||  ||||||||||
Sbjct: 450 gtcatggataacttgacagagcttctcacgtggatctccccacaggacttt 400
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>gb|AY107821.1| Zea mays PCO148543 mRNA sequence
          Length = 910

 Score =  109 bits (55), Expect = 1e-20
 Identities = 97/111 (87%)
 Strand = Plus / Minus

                                                                       
Query: 294 cttgacaacggtgaccgggcacgcggcgttgttcacgacgtaatcgctgacactgcccaa 353
           |||||| |||||||| ||||| |  || |||||||| || || ||||||||||| |||||
Sbjct: 651 cttgacgacggtgacagggcaggttgcattgttcacaacatagtcgctgacacttcccaa 592

                                                              
Query: 354 gagcaccctcttgagcttgccaaggcccctgctcccaatgaccaggcagct 404
           ||||||||||||||||||||||||||||||||| || || |||| ||||||
Sbjct: 591 gagcaccctcttgagcttgccaaggcccctgcttcctataaccaagcagct 541
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score =  107 bits (54), Expect = 4e-20
 Identities = 99/114 (86%)
 Strand = Plus / Plus

                                                                           
Query: 360     cctcttgagcttgccaaggcccctgctcccaatgaccaggcagctgatgggcatgtcatg 419
               ||||||||| |||||||| |||||||| ||||| |||| |||||| ||||| || || | 
Sbjct: 3285098 cctcttgagtttgccaagacccctgcttccaataaccaagcagctcatggggatttcgtt 3285157

                                                                     
Query: 420     gatggcttggcatagcttctcgcggggatctccaaacaggactttggaaaccac 473
               ||||||||||||||||||||| |||||||||||  | ||||||||| |||||||
Sbjct: 3285158 gatggcttggcatagcttctcacggggatctccccaaaggactttgaaaaccac 3285211



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 64/74 (86%)
 Strand = Plus / Plus

                                                                           
Query: 289     gctggcttgacaacggtgaccgggcacgcggcgttgttcacgacgtaatcgctgacactg 348
               |||| ||||||||| ||||| ||||| | |||||||||||||||||| |||||||| || 
Sbjct: 3284931 gctgtcttgacaactgtgactgggcaagtggcgttgttcacgacgtagtcgctgacgcta 3284990

                             
Query: 349     cccaagagcaccct 362
               || || ||||||||
Sbjct: 3284991 cctaacagcaccct 3285004



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 42/47 (89%)
 Strand = Plus / Plus

                                                              
Query: 505     agcatgtccagtgtttcagcatcaggcttcaccccatatttctttgc 551
               |||||||||| |||||| |||||||||||  | ||||||||||||||
Sbjct: 3285325 agcatgtccaatgtttcggcatcaggctttgctccatatttctttgc 3285371
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>gb|AC087425.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0676G05,
             complete sequence
          Length = 167317

 Score =  107 bits (54), Expect = 4e-20
 Identities = 99/114 (86%)
 Strand = Plus / Plus

                                                                         
Query: 360   cctcttgagcttgccaaggcccctgctcccaatgaccaggcagctgatgggcatgtcatg 419
             ||||||||| |||||||| |||||||| ||||| |||| |||||| ||||| || || | 
Sbjct: 78922 cctcttgagtttgccaagacccctgcttccaataaccaagcagctcatggggatttcgtt 78981

                                                                   
Query: 420   gatggcttggcatagcttctcgcggggatctccaaacaggactttggaaaccac 473
             ||||||||||||||||||||| |||||||||||  | ||||||||| |||||||
Sbjct: 78982 gatggcttggcatagcttctcacggggatctccccaaaggactttgaaaaccac 79035



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 64/74 (86%)
 Strand = Plus / Plus

                                                                         
Query: 289   gctggcttgacaacggtgaccgggcacgcggcgttgttcacgacgtaatcgctgacactg 348
             |||| ||||||||| ||||| ||||| | |||||||||||||||||| |||||||| || 
Sbjct: 78755 gctgtcttgacaactgtgactgggcaagtggcgttgttcacgacgtagtcgctgacgcta 78814

                           
Query: 349   cccaagagcaccct 362
             || || ||||||||
Sbjct: 78815 cctaacagcaccct 78828



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 42/47 (89%)
 Strand = Plus / Plus

                                                            
Query: 505   agcatgtccagtgtttcagcatcaggcttcaccccatatttctttgc 551
             |||||||||| |||||| |||||||||||  | ||||||||||||||
Sbjct: 79149 agcatgtccaatgtttcggcatcaggctttgctccatatttctttgc 79195
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>gb|BT019453.1| Homo sapiens v-ets erythroblastosis virus E26 oncogene homolog 1
           (avian) mRNA, complete cds
          Length = 1326

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 490 ttagctatggtgttgagcatgtccagtgt 518
           ||||||||||| ||||||||| |||||||
Sbjct: 479 ttagctatggtattgagcatgcccagtgt 507
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>gb|BT019452.1| Homo sapiens v-ets erythroblastosis virus E26 oncogene homolog 1
           (avian) mRNA, complete cds
          Length = 1326

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 490 ttagctatggtgttgagcatgtccagtgt 518
           ||||||||||| ||||||||| |||||||
Sbjct: 479 ttagctatggtattgagcatgcccagtgt 507
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>gb|AE009171.1| Agrobacterium tumefaciens str. C58 circular chromosome, section 197
            of 256 of the complete sequence
          Length = 11237

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 245  ccagatgaggatattttcgatgacg 269
            ||||||||||||||| |||||||||
Sbjct: 4507 ccagatgaggatattgtcgatgacg 4483
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>gb|BC017314.2| Homo sapiens v-ets erythroblastosis virus E26 oncogene homolog 1
           (avian), mRNA (cDNA clone MGC:29755 IMAGE:3946751),
           complete cds
          Length = 2154

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 490 ttagctatggtgttgagcatgtccagtgt 518
           ||||||||||| ||||||||| |||||||
Sbjct: 749 ttagctatggtattgagcatgcccagtgt 777
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>emb|AL590550.8| Human DNA sequence from clone RP11-398B19 on chromosome 6, complete
            sequence
          Length = 60406

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 221  atatataggactcaacaaact 241
            |||||||||||||||||||||
Sbjct: 4273 atatataggactcaacaaact 4253
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>emb|BX640634.1|HSM806680 Homo sapiens mRNA; cDNA DKFZp686D0662 (from clone DKFZp686D0662);
           complete cds
          Length = 5182

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 490 ttagctatggtgttgagcatgtccagtgt 518
           ||||||||||| ||||||||| |||||||
Sbjct: 696 ttagctatggtattgagcatgcccagtgt 724
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>ref|NM_005238.2| Homo sapiens v-ets erythroblastosis virus E26 oncogene homolog 1
           (avian) (ETS1), mRNA
          Length = 5228

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 490 ttagctatggtgttgagcatgtccagtgt 518
           ||||||||||| ||||||||| |||||||
Sbjct: 751 ttagctatggtattgagcatgcccagtgt 779
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>gb|AE007869.1| Agrobacterium tumefaciens str. C58, complete genome
          Length = 2841581

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 245     ccagatgaggatattttcgatgacg 269
               ||||||||||||||| |||||||||
Sbjct: 2184179 ccagatgaggatattgtcgatgacg 2184155
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>emb|CR542254.1| Homo sapiens full open reading frame cDNA clone RZPDo834B0726D for
           gene ETS1, v-ets erythroblastosis virus E26 oncogene
           homolog 1 (avian); complete cds, incl. stopcodon
          Length = 1326

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 490 ttagctatggtgttgagcatgtccagtgt 518
           ||||||||||| ||||||||| |||||||
Sbjct: 479 ttagctatggtattgagcatgcccagtgt 507
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>gb|AY890388.1| Synthetic construct Homo sapiens clone FLH018852.01X v-ets
           erythroblastosis virus E26 oncogene-like 1 (ETS1) mRNA,
           complete cds
          Length = 1326

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 490 ttagctatggtgttgagcatgtccagtgt 518
           ||||||||||| ||||||||| |||||||
Sbjct: 479 ttagctatggtattgagcatgcccagtgt 507
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>gb|AY888523.1| Synthetic construct Homo sapiens clone FLH008825.01X v-ets
           erythroblastosis virus E26 oncogene-like 1 (ETS1) mRNA,
           complete cds
          Length = 1326

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 490 ttagctatggtgttgagcatgtccagtgt 518
           ||||||||||| ||||||||| |||||||
Sbjct: 479 ttagctatggtattgagcatgcccagtgt 507
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>gb|AY888522.1| Synthetic construct Homo sapiens clone FLH008824.01X v-ets
           erythroblastosis virus E26 oncogene-like 1 (ETS1) mRNA,
           complete cds
          Length = 1326

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 490 ttagctatggtgttgagcatgtccagtgt 518
           ||||||||||| ||||||||| |||||||
Sbjct: 479 ttagctatggtattgagcatgcccagtgt 507
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>gb|AY893897.1| Synthetic construct Homo sapiens clone FLH127901.01L v-ets
           erythroblastosis virus E26 oncogene-like 1 (ETS1) mRNA,
           partial cds
          Length = 1326

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 490 ttagctatggtgttgagcatgtccagtgt 518
           ||||||||||| ||||||||| |||||||
Sbjct: 479 ttagctatggtattgagcatgcccagtgt 507
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>gb|AY893450.1| Synthetic construct Homo sapiens clone FLH127819.01X v-ets
           erythroblastosis virus E26 oncogene-like 1 (ETS1) mRNA,
           complete cds
          Length = 1326

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 490 ttagctatggtgttgagcatgtccagtgt 518
           ||||||||||| ||||||||| |||||||
Sbjct: 479 ttagctatggtattgagcatgcccagtgt 507
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>gb|AY893377.1| Synthetic construct Homo sapiens clone FLH131104.01X v-ets
           erythroblastosis virus E26 oncogene-like 1 (ETS1) mRNA,
           complete cds
          Length = 1326

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 490 ttagctatggtgttgagcatgtccagtgt 518
           ||||||||||| ||||||||| |||||||
Sbjct: 479 ttagctatggtattgagcatgcccagtgt 507
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>gb|AY892857.1| Synthetic construct Homo sapiens clone FLH018848.01L v-ets
           erythroblastosis virus E26 oncogene-like 1 (ETS1) mRNA,
           partial cds
          Length = 1326

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 490 ttagctatggtgttgagcatgtccagtgt 518
           ||||||||||| ||||||||| |||||||
Sbjct: 479 ttagctatggtattgagcatgcccagtgt 507
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>gb|J04101.1|HUMETS1A Human erythroblastosis virus oncogene homolog 1 (ets-1) mRNA,
           complete cds
          Length = 1450

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 490 ttagctatggtgttgagcatgtccagtgt 518
           ||||||||||| ||||||||| |||||||
Sbjct: 598 ttagctatggtattgagcatgcccagtgt 626
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>emb|X14798.1|HSCETS1 Human DNA for c-ets-1 proto-oncogene
          Length = 1604

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 490 ttagctatggtgttgagcatgtccagtgt 518
           ||||||||||| ||||||||| |||||||
Sbjct: 757 ttagctatggtattgagcatgcccagtgt 785
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>gb|AC154009.1| Mus musculus 6 NOVECTOR RP24-544G1 (Roswell Park Cancer Institute
            (C57BL/6J Male) Mouse BAC Library) complete sequence
          Length = 140214

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 221  atatataggactcaacaaac 240
            ||||||||||||||||||||
Sbjct: 9205 atatataggactcaacaaac 9186
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>gb|AC152185.1| Medicago truncatula chromosome 2 BAC clone mth2-97e5, complete sequence
          Length = 132467

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 325    ttcacgacgtaatcgctgacactgccca 352
              ||||| ||||||| ||||||||||||||
Sbjct: 108557 ttcactacgtaattgctgacactgccca 108530
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>gb|AY242824.1| Afipia felis strain B-91-007352 RNA polymerase beta subunit (rpoB)
           gene, complete cds
          Length = 4137

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 36  atcacgcatgcagcaaacagcagc 59
           ||||||| ||||||||||||||||
Sbjct: 557 atcacgcgtgcagcaaacagcagc 534
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>gb|AC149542.1| Populus trichocarpa clone Pop1-2C5, complete sequence
          Length = 146274

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 517   gtttcagcatcaggcttcaccccatatttctt 548
             ||||||| ||||||||||| ||| ||||||||
Sbjct: 39891 gtttcaggatcaggcttcaacccgtatttctt 39922
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>gb|AC125330.5| Mus musculus BAC clone RP23-217A6 from chromosome 6, complete sequence
          Length = 182355

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 221    atatataggactcaacaaac 240
              ||||||||||||||||||||
Sbjct: 120679 atatataggactcaacaaac 120660
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>gb|AE014311.1| Homo sapiens chromosome 13q34 schizophrenia region contig 1 section 8
             of 11 of the complete sequence
          Length = 250029

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 249   atgaggatattttcgatgac 268
             ||||||||||||||||||||
Sbjct: 56907 atgaggatattttcgatgac 56926
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>gb|AC144539.7| Medicago truncatula clone mth2-11o10, complete sequence
          Length = 113167

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 325  ttcacgacgtaatcgctgacactgccca 352
            ||||| ||||||| ||||||||||||||
Sbjct: 7772 ttcactacgtaattgctgacactgccca 7745
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>emb|AL732414.17| Human DNA sequence from clone RP11-423F24 on chromosome 1 Contains the
             3' end of the gene for the likely ortholog of yeast ARV1
             (ARV1), the gene for a novel protein, a ring finger
             protein 4 (RNF4) pseudogene and a CpG island, complete
             sequence
          Length = 105642

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 42    catgcagcaaacagcagcac 61
             ||||||||||||||||||||
Sbjct: 60685 catgcagcaaacagcagcac 60704



 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 42    catgcagcaaacagcagcac 61
             ||||||||||||||||||||
Sbjct: 58699 catgcagcaaacagcagcac 58718
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>emb|AL356461.15| Human DNA sequence from clone RP11-180D15 on chromosome Xq13.2-21.2
            Contains a purinergic receptor P2Y G-protein coupled 10
            (P2RY10) pseudogene, complete sequence
          Length = 127615

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 409  ggcatgtcatggatggcttg 428
            ||||||||||||||||||||
Sbjct: 9807 ggcatgtcatggatggcttg 9826
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>gb|AC117489.3| Homo sapiens 3 BAC CTD-2006M22 (CalTech BAC Library D) complete
             sequence
          Length = 145729

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 116   acacatgcacagattacaca 135
             ||||||||||||||||||||
Sbjct: 17593 acacatgcacagattacaca 17574
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>gb|AC119731.3| Homo sapiens 3 BAC RP11-135O2 (Roswell Park Cancer Institute Human
            BAC Library) complete sequence
          Length = 44700

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 116  acacatgcacagattacaca 135
            ||||||||||||||||||||
Sbjct: 8542 acacatgcacagattacaca 8561
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>ref|XM_687926.1| PREDICTED: Danio rerio similar to polyA polymerase alpha
           (LOC564596), partial mRNA
          Length = 1180

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 390 aatgaccaggcagctgatgg 409
           ||||||||||||||||||||
Sbjct: 223 aatgaccaggcagctgatgg 242
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>gb|AC008195.6|AC008195 Drosophila melanogaster, chromosome 3R, region 93F-93F, BAC clone
             BACR42I20, complete sequence
          Length = 164944

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 163   tcaatcattattacaaacaa 182
             ||||||||||||||||||||
Sbjct: 79857 tcaatcattattacaaacaa 79838
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>gb|AE003736.3| Drosophila melanogaster chromosome 3R, section 74 of 118 of the complete
              sequence
          Length = 235928

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 163    tcaatcattattacaaacaa 182
              ||||||||||||||||||||
Sbjct: 105865 tcaatcattattacaaacaa 105846
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>gb|AC120132.11| Mus musculus chromosome 6, clone RP23-105D1, complete sequence
          Length = 203185

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 221    atatataggactcaacaaac 240
              ||||||||||||||||||||
Sbjct: 130970 atatataggactcaacaaac 130951
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>gb|L07144.3| Caenorhabditis elegans cosmid R05D3, complete sequence
          Length = 44910

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 235   acaaactaaaccagatgaggatat 258
             ||||||||||| ||||||||||||
Sbjct: 12867 acaaactaaacaagatgaggatat 12890
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>emb|AL626783.16| Mouse DNA sequence from clone RP23-406B13 on chromosome 4, complete
             sequence
          Length = 179370

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 168   cattattacaaacaacaaca 187
             ||||||||||||||||||||
Sbjct: 70766 cattattacaaacaacaaca 70747


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,789,948
Number of Sequences: 3902068
Number of extensions: 4789948
Number of successful extensions: 84164
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 84052
Number of HSP's gapped (non-prelim): 104
length of query: 569
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 546
effective length of database: 17,143,297,704
effective search space: 9360240546384
effective search space used: 9360240546384
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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