Clone Name | rbasd2j03 |
---|---|
Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | CTND2_MOUSE (O35927) Catenin delta-2 (Neural plakophilin-related... | 30 | 3.9 | 2 | CSCA_ECOLI (P40714) Sucrose-6-phosphate hydrolase (EC 3.2.1.26) ... | 29 | 8.6 |
---|
>CTND2_MOUSE (O35927) Catenin delta-2 (Neural plakophilin-related ARM-repeat| protein) (NPRAP) (Neurojungin) Length = 1247 Score = 30.4 bits (67), Expect = 3.9 Identities = 14/37 (37%), Positives = 20/37 (54%) Frame = -2 Query: 536 PPSTPFLPHVSTNFDLCTSPPHHSLLHM*SNPLPCHP 426 PP PF P + + F L +PP + L+ S+ LP P Sbjct: 224 PPREPFAPSLGSAFHLPDAPPAAAALYYSSSTLPAPP 260
>CSCA_ECOLI (P40714) Sucrose-6-phosphate hydrolase (EC 3.2.1.26) (Sucrase)| (Invertase) Length = 477 Score = 29.3 bits (64), Expect = 8.6 Identities = 25/92 (27%), Positives = 42/92 (45%), Gaps = 4/92 (4%) Frame = +1 Query: 16 RSTHEANKXKQQHLLIRWNTTSSKV*TTSQADITYKETV*LKLRCSLTTKETSN*IYWKL 195 R HEA +QQH I T S+K A + V ++L+ +L + + +L Sbjct: 329 RPVHEAESLRQQHQSISPRTISNKYVLQENA-----QAVEIQLQWALKNSDAEH-YGLQL 382 Query: 196 GSEHQRYVRHE----VHWRSQPYYGLSARRSL 279 G+ + Y+ ++ V WR P+ L RS+ Sbjct: 383 GAGMRLYIDNQSERLVLWRYYPHENLDGYRSI 414 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 92,500,093 Number of Sequences: 219361 Number of extensions: 2165992 Number of successful extensions: 5028 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 4835 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5026 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4986986160 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)