Clone Name | rbasd2i20 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | PP2C_LEICH (P36982) Protein phosphatase 2C (EC 3.1.3.16) (PP2C) | 31 | 1.3 | 2 | PURQ_THEVO (Q97C36) Phosphoribosylformylglycinamidine synthase I... | 28 | 6.4 | 3 | WDR19_HUMAN (Q8NEZ3) WD-repeat protein 19 | 28 | 8.3 | 4 | NRG3_HUMAN (P56975) Pro-neuregulin-3, membrane-bound isoform pre... | 28 | 8.3 |
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>PP2C_LEICH (P36982) Protein phosphatase 2C (EC 3.1.3.16) (PP2C)| Length = 406 Score = 30.8 bits (68), Expect = 1.3 Identities = 12/35 (34%), Positives = 24/35 (68%) Frame = -1 Query: 412 VKSTKDPQAAAKRLTTEALARKSKDDISCIVIRFR 308 +++ D A R+ EA+ R S+D+ISC++++F+ Sbjct: 241 LETCNDLAEVAGRVCEEAIERGSRDNISCMIVQFK 275
>PURQ_THEVO (Q97C36) Phosphoribosylformylglycinamidine synthase I (EC 6.3.5.3)| (FGAM synthase I) Length = 258 Score = 28.5 bits (62), Expect = 6.4 Identities = 14/43 (32%), Positives = 25/43 (58%), Gaps = 1/43 (2%) Frame = +2 Query: 227 SSENQITTPHRSWIEKLKWSVNG-VDSAAEADNDAGDIVLALP 352 S+EN +T ++ W+ NG +DS A N+AG+++ +P Sbjct: 184 SNENDVT-------DEYPWNPNGSIDSVASLSNEAGNVIGLMP 219
>WDR19_HUMAN (Q8NEZ3) WD-repeat protein 19| Length = 1342 Score = 28.1 bits (61), Expect = 8.3 Identities = 13/37 (35%), Positives = 22/37 (59%) Frame = +3 Query: 81 AHTIHYSLLAPSLKTLHRLPMKCSTNLKPVHSYIQVQ 191 AH + +S+ A ++P + +TNL +HSYI V+ Sbjct: 1125 AHDVLFSMYAELKSQKIKIPSEMATNLMILHSYILVK 1161
>NRG3_HUMAN (P56975) Pro-neuregulin-3, membrane-bound isoform precursor| (Pro-NRG3) [Contains: Neuregulin-3 (NRG-3)] Length = 720 Score = 28.1 bits (61), Expect = 8.3 Identities = 24/86 (27%), Positives = 39/86 (45%), Gaps = 2/86 (2%) Frame = +3 Query: 6 TTRCSTDWPGT--YGGVIYAQMNDRHPAHTIHYSLLAPSLKTLHRLPMKCSTNLKPVHSY 179 TT ST P T GG ++ +R + AP+ HR+P++ S + Sbjct: 129 TTTTSTTSPATPSAGGAASSRTPNRISTRLTTITR-APTRFPGHRVPIRASPRSTTARNT 187 Query: 180 IQVQTIPATTT*FEFGAARIRSRPHI 257 T+P+TT F F ++ + SRP + Sbjct: 188 AAPATVPSTTAPF-FSSSTLGSRPPV 212 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 56,691,740 Number of Sequences: 219361 Number of extensions: 1065215 Number of successful extensions: 2989 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 2911 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2988 length of database: 80,573,946 effective HSP length: 100 effective length of database: 58,637,846 effective search space used: 2169600302 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)