ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd2i18
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1DNJ16_ARATH (Q8VXV4) Chaperone protein dnaJ 16 (Protein ARG1-LIK... 105 1e-22
2DNJ15_ARATH (Q9ZSY2) Chaperone protein dnaJ 15 (Protein ALTERED ... 72 9e-13
3DNJ39_ARATH (Q6XL73) Chaperone protein dnaJ 39 (Protein ARG1-LIK... 70 4e-12
4PEX14_PICAN (P78723) Peroxisomal membrane protein PER10 (Peroxin... 31 2.9
5VATI_METJA (Q57675) V-type ATP synthase subunit I (EC 3.6.3.14) ... 30 4.9
6KINH_DROME (P17210) Kinesin heavy chain 30 6.4

>DNJ16_ARATH (Q8VXV4) Chaperone protein dnaJ 16 (Protein ARG1-LIKE1) (AtARL1)|
           (AtJ16) (AtDjB16)
          Length = 436

 Score =  105 bits (261), Expect = 1e-22
 Identities = 56/138 (40%), Positives = 80/138 (57%), Gaps = 2/138 (1%)
 Frame = -2

Query: 560 VEAKILAKRSELSKFESEYREVLAKFTEMTSRYAQEMQTIDELLNERNAIHASYTNSPTL 381
           VEA+IL KR+EL+KFE+EYREVL +FT+MTSRYAQEMQ+IDELL +RN IH++YT  P +
Sbjct: 300 VEAQILTKRAELAKFETEYREVLVQFTDMTSRYAQEMQSIDELLKQRNEIHSAYTTIPLM 359

Query: 380 KRXXX--XXXXXXXXXXXXXXXXXSVRKDKKSKSPTTMEASASDXXXXXXXXXXXXXXXX 207
           KR                      + +++++ +     E S+                  
Sbjct: 360 KRSSSKNRMRKSSFKKAAAKAPAPTEQEEEEEEEEEEEEESSRQKNKKPSTCDKSETLKK 419

Query: 206 XXRWFNIHHLKVDKRRPC 153
             +WFN+ HLK+DK++PC
Sbjct: 420 KSKWFNL-HLKLDKKKPC 436



to top

>DNJ15_ARATH (Q9ZSY2) Chaperone protein dnaJ 15 (Protein ALTERED RESPONSE TO|
           GRAVITY) (AtARG1) (AtJ15) (AtDjB15)
          Length = 410

 Score = 72.4 bits (176), Expect = 9e-13
 Identities = 31/55 (56%), Positives = 47/55 (85%)
 Frame = -2

Query: 560 VEAKILAKRSELSKFESEYREVLAKFTEMTSRYAQEMQTIDELLNERNAIHASYT 396
           +EA+IL KR+EL +FE+EYR+ LA+F E+T+RY QE QT+DELL +R+ IH++++
Sbjct: 297 IEAQILRKRNELRQFETEYRKALARFQEVTNRYTQEKQTVDELLKQRDTIHSTFS 351



to top

>DNJ39_ARATH (Q6XL73) Chaperone protein dnaJ 39 (Protein ARG1-LIKE2) (AtARL2)|
           (AtJ39) (AtDjC39)
          Length = 414

 Score = 70.1 bits (170), Expect = 4e-12
 Identities = 36/66 (54%), Positives = 46/66 (69%)
 Frame = -2

Query: 572 SYEGVEAKILAKRSELSKFESEYREVLAKFTEMTSRYAQEMQTIDELLNERNAIHASYTN 393
           S    EA+I++KR+EL KFE+EY EV A+FTEM S+   E+Q IDELL  RN I A+YT 
Sbjct: 299 SLRSTEAQIVSKRTELLKFEAEYHEVFAQFTEMASKCTGEVQEIDELLKRRNEICAAYTI 358

Query: 392 SPTLKR 375
            P  K+
Sbjct: 359 FPPTKQ 364



to top

>PEX14_PICAN (P78723) Peroxisomal membrane protein PER10 (Peroxin-14)|
          Length = 351

 Score = 30.8 bits (68), Expect = 2.9
 Identities = 16/52 (30%), Positives = 28/52 (53%)
 Frame = -2

Query: 533 SELSKFESEYREVLAKFTEMTSRYAQEMQTIDELLNERNAIHASYTNSPTLK 378
           S L KFE++ +E   K    + +  + +Q +DE++N+ N    +  N  TLK
Sbjct: 144 SLLEKFEADQKEFYQKQEAKSKKIDETLQEVDEIINKTN--EKNLNNEETLK 193



to top

>VATI_METJA (Q57675) V-type ATP synthase subunit I (EC 3.6.3.14) (V-type ATPase|
           subunit I)
          Length = 695

 Score = 30.0 bits (66), Expect = 4.9
 Identities = 17/58 (29%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
 Frame = -2

Query: 566 EGVEAKILAK-RSELSKFESEYREVLAKFTEMTSRYAQEMQTIDELLNERNAIHASYT 396
           EG  ++ L+K  SEL   ESE   ++ K   +  ++ +E+  + ELL+   A   +Y+
Sbjct: 243 EGTPSEALSKIESELKAIESERNSLIEKLKALAQKWEKELLAVYELLSIEKARGDAYS 300



to top

>KINH_DROME (P17210) Kinesin heavy chain|
          Length = 975

 Score = 29.6 bits (65), Expect = 6.4
 Identities = 15/56 (26%), Positives = 29/56 (51%)
 Frame = -2

Query: 575 RSYEGVEAKILAKRSELSKFESEYREVLAKFTEMTSRYAQEMQTIDELLNERNAIH 408
           R YE +++++   + E    + E +EVL    E+   Y Q+ Q ID    + +A++
Sbjct: 481 REYETLQSEMARIQQENESAKEEVKEVLQALEELAVNYDQKSQEIDNKNKDIDALN 536


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 70,516,204
Number of Sequences: 219361
Number of extensions: 1263999
Number of successful extensions: 3238
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3174
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3237
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4872342800
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top