ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd2i17
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ISAP1_ORYSA (Q9LLX1) Multiple stress-responsive zinc-finger prot... 100 3e-21
2ZF2N1_ARATH (Q6NNI8) Zinc finger A20 and AN1 domains-containing ... 99 8e-21
3Z20D2_HUMAN (O76080) Zinc finger A20 domain-containing protein 2... 99 1e-20
4Z20D2_MOUSE (O88878) Zinc finger A20 domain-containing protein 2... 98 2e-20
5ZF2N2_ARATH (Q9SJM6) Zinc finger A20 and AN1 domains-containing ... 94 3e-19
6ZF2N3_ARATH (Q9SZ69) Zinc finger A20 and AN1 domains-containing ... 94 4e-19
7ZFAN3_HUMAN (Q9H8U3) AN1-type zinc finger protein 3 (Testis-expr... 49 2e-05
8ZFAN3_RAT (Q5U2M7) AN1-type zinc finger protein 3 (Testis-expres... 47 6e-05
9ZFAN3_MOUSE (Q497H0) AN1-type zinc finger protein 3 (Testis-expr... 47 6e-05
10ZFAN3_XENLA (Q66J85) AN1-type zinc finger protein 3 homolog 47 6e-05
11ZFN2B_RAT (Q4KLG9) AN1-type zinc finger protein 2B 33 0.52
12ZFN2B_MOUSE (Q91X58) AN1-type zinc finger protein 2B 32 1.5
13NORQ_PARDE (Q51664) Protein norQ 32 2.0
14CO9_MOUSE (P06683) Complement component C9 precursor 31 3.4
15VG40_ICHV1 (Q00145) Hypothetical gene 40 protein 30 4.4
16ALG2_CANGA (Q6FJJ9) Alpha-1,3-mannosyltransferase ALG2 (EC 2.4.1... 30 7.6
17ZFN2B_HUMAN (Q8WV99) AN1-type zinc finger protein 2B 30 7.6
18SMBP2_HUMAN (P38935) DNA-binding protein SMUBP-2 (EC 3.6.1.-) (A... 30 7.6
19YVDC_LACLA (Q9CE03) Hypothetical UPF0177 protein yvdC 30 7.6
20PRR95_ORYSA (Q689G6) Two-component response regulator-like PRR95... 29 9.9
21IL17E_HUMAN (Q9H293) Interleukin-17E precursor (IL-17E) (Interle... 29 9.9
22PA2X_BUNFA (P14411) Phospholipase A2 isozyme X, basic (EC 3.1.1.... 29 9.9

>ISAP1_ORYSA (Q9LLX1) Multiple stress-responsive zinc-finger protein ISAP1|
           (Stress-associated protein 1) (OsISAP1)
          Length = 164

 Score =  100 bits (250), Expect = 3e-21
 Identities = 45/82 (54%), Positives = 59/82 (71%), Gaps = 1/82 (1%)
 Frame = -2

Query: 539 PAADVAGTSEAVAVSPKRKEGP-NRCSTCXKRVGLTGFNCRCGNMYCSLHRYSDKHDCQF 363
           P  +   ++ A A +P  K    NRCS C KRVGLTGF CRCG+++C  HRYSD+H C +
Sbjct: 80  PPVEEMASALATAPAPVAKTSAVNRCSRCRKRVGLTGFRCRCGHLFCGEHRYSDRHGCSY 139

Query: 362 DYRTAARDAIAKANPVVKAEKL 297
           DY++AARDAIA+ NPVV+A K+
Sbjct: 140 DYKSAARDAIARDNPVVRAAKI 161



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>ZF2N1_ARATH (Q6NNI8) Zinc finger A20 and AN1 domains-containing protein|
           At1g12440
          Length = 168

 Score = 99.4 bits (246), Expect = 8e-21
 Identities = 43/78 (55%), Positives = 57/78 (73%)
 Frame = -2

Query: 521 GTSEAVAVSPKRKEGPNRCSTCXKRVGLTGFNCRCGNMYCSLHRYSDKHDCQFDYRTAAR 342
           G S A  + P  K    RC +C K+VG+TGF CRCG+ +C  HRY + H+CQFD++  AR
Sbjct: 92  GDSAAAPLDPP-KSTATRCLSCNKKVGVTGFKCRCGSTFCGTHRYPESHECQFDFKGVAR 150

Query: 341 DAIAKANPVVKAEKLDKI 288
           +AIAKANPVVKA+K+D+I
Sbjct: 151 EAIAKANPVVKADKVDRI 168



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>Z20D2_HUMAN (O76080) Zinc finger A20 domain-containing protein 2 (Zinc finger|
           protein 216)
          Length = 213

 Score = 99.0 bits (245), Expect = 1e-20
 Identities = 47/90 (52%), Positives = 62/90 (68%), Gaps = 3/90 (3%)
 Frame = -2

Query: 548 VVQPAADVA--GTSEAVAVSPKR-KEGPNRCSTCXKRVGLTGFNCRCGNMYCSLHRYSDK 378
           V QP+  V+   TS++   +P+  K   NRC  C K+VGLTGF+CRCGN++C LHRYSDK
Sbjct: 124 VTQPSPSVSQPSTSQSEEKAPELPKPKKNRCFMCRKKVGLTGFDCRCGNLFCGLHRYSDK 183

Query: 377 HDCQFDYRTAARDAIAKANPVVKAEKLDKI 288
           H+C +DY+  A   I K NPVV AEK+ +I
Sbjct: 184 HNCPYDYKAEAAAKIRKENPVVVAEKIQRI 213



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>Z20D2_MOUSE (O88878) Zinc finger A20 domain-containing protein 2 (Zinc finger|
           protein 216)
          Length = 213

 Score = 97.8 bits (242), Expect = 2e-20
 Identities = 48/92 (52%), Positives = 60/92 (65%), Gaps = 5/92 (5%)
 Frame = -2

Query: 548 VVQPAADVAGTS-----EAVAVSPKRKEGPNRCSTCXKRVGLTGFNCRCGNMYCSLHRYS 384
           V QP+  V+  S     E     PK K+  NRC  C K+VGLTGF+CRCGN++C LHRYS
Sbjct: 124 VTQPSPSVSQPSSSQSEEKAPELPKPKK--NRCFMCRKKVGLTGFDCRCGNLFCGLHRYS 181

Query: 383 DKHDCQFDYRTAARDAIAKANPVVKAEKLDKI 288
           DKH+C +DY+  A   I K NPVV AEK+ +I
Sbjct: 182 DKHNCPYDYKAEAAAKIRKENPVVVAEKIQRI 213



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>ZF2N2_ARATH (Q9SJM6) Zinc finger A20 and AN1 domains-containing protein|
           At2g36320
          Length = 161

 Score = 94.0 bits (232), Expect = 3e-19
 Identities = 40/69 (57%), Positives = 49/69 (71%)
 Frame = -2

Query: 494 PKRKEGPNRCSTCXKRVGLTGFNCRCGNMYCSLHRYSDKHDCQFDYRTAARDAIAKANPV 315
           P   + PNRC+ C KRVGLTGF CRCG  +C  HRY + H C FD+++A R+ IAKANP+
Sbjct: 93  PSPPQRPNRCTVCRKRVGLTGFMCRCGTTFCGSHRYPEVHGCTFDFKSAGREEIAKANPL 152

Query: 314 VKAEKLDKI 288
           V A KL KI
Sbjct: 153 VIAAKLQKI 161



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>ZF2N3_ARATH (Q9SZ69) Zinc finger A20 and AN1 domains-containing protein|
           At4g12040
          Length = 175

 Score = 93.6 bits (231), Expect = 4e-19
 Identities = 41/88 (46%), Positives = 57/88 (64%), Gaps = 1/88 (1%)
 Frame = -2

Query: 548 VVQPAADVAGTSEAVAVSPKRKEGPN-RCSTCXKRVGLTGFNCRCGNMYCSLHRYSDKHD 372
           V    + V   +E     P R   PN RC +C K+VG+ GF C+CG+ +C  HRY +KH+
Sbjct: 88  VTAEPSSVPVAAEQDEAEPSRPVRPNNRCFSCNKKVGVMGFKCKCGSTFCGSHRYPEKHE 147

Query: 371 CQFDYRTAARDAIAKANPVVKAEKLDKI 288
           C FD++   RDAIAKANP+VKA+K+ +I
Sbjct: 148 CSFDFKEVGRDAIAKANPLVKADKVQRI 175



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>ZFAN3_HUMAN (Q9H8U3) AN1-type zinc finger protein 3 (Testis-expressed sequence|
           27)
          Length = 227

 Score = 48.5 bits (114), Expect = 2e-05
 Identities = 24/79 (30%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
 Frame = -2

Query: 518 TSEAVAVSPKRKEGPNRCSTCXKRVGLTGF---NCRCGNMYCSLHRYSDKHDCQFDYRTA 348
           T  +   S  +++   RC  C  ++ L      +CRCG ++C LHR  ++HDC FD+   
Sbjct: 140 TERSEETSRSKQKSRRRCFQCQTKLELVQQELGSCRCGYVFCMLHRLPEQHDCTFDHMGR 199

Query: 347 ARDAIAKANPVVKAEKLDK 291
            R+       ++K  KLD+
Sbjct: 200 GRE-----EAIMKMVKLDR 213



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>ZFAN3_RAT (Q5U2M7) AN1-type zinc finger protein 3 (Testis-expressed sequence|
           27)
          Length = 227

 Score = 46.6 bits (109), Expect = 6e-05
 Identities = 22/69 (31%), Positives = 37/69 (53%), Gaps = 3/69 (4%)
 Frame = -2

Query: 488 RKEGPNRCSTCXKRVGLTGF---NCRCGNMYCSLHRYSDKHDCQFDYRTAARDAIAKANP 318
           +++   RC  C  ++ L      +CRCG ++C LHR  ++HDC FD+    R+       
Sbjct: 150 KQKSRRRCFQCQTKLELVQQELGSCRCGYVFCMLHRLPEQHDCTFDHMGRGRE-----EA 204

Query: 317 VVKAEKLDK 291
           ++K  KLD+
Sbjct: 205 IMKMVKLDR 213



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>ZFAN3_MOUSE (Q497H0) AN1-type zinc finger protein 3 (Testis-expressed sequence|
           27)
          Length = 227

 Score = 46.6 bits (109), Expect = 6e-05
 Identities = 22/69 (31%), Positives = 37/69 (53%), Gaps = 3/69 (4%)
 Frame = -2

Query: 488 RKEGPNRCSTCXKRVGLTGF---NCRCGNMYCSLHRYSDKHDCQFDYRTAARDAIAKANP 318
           +++   RC  C  ++ L      +CRCG ++C LHR  ++HDC FD+    R+       
Sbjct: 150 KQKSRRRCFQCQTKLELVQQELGSCRCGYVFCMLHRLPEQHDCTFDHMGRGRE-----EA 204

Query: 317 VVKAEKLDK 291
           ++K  KLD+
Sbjct: 205 IMKMVKLDR 213



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>ZFAN3_XENLA (Q66J85) AN1-type zinc finger protein 3 homolog|
          Length = 226

 Score = 46.6 bits (109), Expect = 6e-05
 Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
 Frame = -2

Query: 497 SPKRKEGPNRCSTCXKRVGLTGF---NCRCGNMYCSLHRYSDKHDCQFDYRTAARDAIAK 327
           S  +++   RC  C  ++ L      +CRCG ++C LHR  ++HDC FD+    R+    
Sbjct: 146 SRSKQKSRRRCFRCQIKLELVQQELGSCRCGYVFCMLHRLPEQHDCTFDHMGRGRE---- 201

Query: 326 ANPVVKAEKLDK 291
              ++K  KLD+
Sbjct: 202 -EAIMKMVKLDR 212



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>ZFN2B_RAT (Q4KLG9) AN1-type zinc finger protein 2B|
          Length = 257

 Score = 33.5 bits (75), Expect = 0.52
 Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
 Frame = -2

Query: 491 KRKEGPNRC--STCXKRVGLTGFNCRCGNMYCSLHRYSDKHDCQFDYRTAARDAIA 330
           KRK   N+C  S C +R  +     RCG  +C  HR+   HDC  +    +R  +A
Sbjct: 92  KRKIFTNKCERSGCRQREMMKLTCDRCGRNFCIKHRHPLDHDCSGEGHPTSRAGLA 147



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>ZFN2B_MOUSE (Q91X58) AN1-type zinc finger protein 2B|
          Length = 257

 Score = 32.0 bits (71), Expect = 1.5
 Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
 Frame = -2

Query: 491 KRKEGPNRC--STCXKRVGLTGFNCRCGNMYCSLHRYSDKHDCQFDYRTAARDAIA 330
           KRK   N+C  S C +R  +     RCG  +C  HR+   H+C  +    +R  +A
Sbjct: 92  KRKIFTNKCERSGCRQREMMKLTCDRCGRNFCIKHRHPLDHECSGEGHQTSRAGLA 147



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>NORQ_PARDE (Q51664) Protein norQ|
          Length = 270

 Score = 31.6 bits (70), Expect = 2.0
 Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
 Frame = -1

Query: 300 ARQDLGVL-QGRNGCNLPRFIIHLCCAILAPPFLVGCH 190
           A  DL VL +G  GC   RF+ H+   +  P + V CH
Sbjct: 32  AANDLPVLLKGPTGCGKTRFVAHMAARLGRPLYTVACH 69



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>CO9_MOUSE (P06683) Complement component C9 precursor|
          Length = 548

 Score = 30.8 bits (68), Expect = 3.4
 Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
 Frame = -2

Query: 470 RCST--CXKRVGLTGFNCRCGNMYCSLHRYSDKHDCQFDYRTAARDAIAK 327
           +C T  C KR  L   +  CG+       YSD++DC  D RT  RD +A+
Sbjct: 104 QCETGRCIKRRLLCNGDNDCGD-------YSDENDCDDDPRTPCRDRVAE 146



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>VG40_ICHV1 (Q00145) Hypothetical gene 40 protein|
          Length = 136

 Score = 30.4 bits (67), Expect = 4.4
 Identities = 27/111 (24%), Positives = 48/111 (43%), Gaps = 15/111 (13%)
 Frame = -3

Query: 304 RSSTRFRCPTGKKWLQSAKVHHPSLLCHPCTSLSCWLPHFLNCTAS*CTLRRGSCKNSIL 125
           RS++ F C    + L   ++  PS+    CT+ SCW  H L  +++   +RR S    + 
Sbjct: 26  RSNSWFVCKIVYRCLSPRRIISPSI----CTAFSCWANHGLRLSST-AAMRRSSSSTFLF 80

Query: 124 SV---IPNGLRVV*LY---------SWWFF---RSVLWLLILASSVLCTXV 17
                + +   V  ++          +W F    S+LW +I +S  LC  +
Sbjct: 81  MASTRMSSSTFVCFIFVFCVSRTAMVFWSFSESTSLLWCIISSSMRLCFSI 131



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>ALG2_CANGA (Q6FJJ9) Alpha-1,3-mannosyltransferase ALG2 (EC 2.4.1.-)|
           (GDP-Man:Man(1)GlcNAc(2)-PP-dolichol
           mannosyltransferase) (Asparagine-linked glycosylation
           protein 2)
          Length = 458

 Score = 29.6 bits (65), Expect = 7.6
 Identities = 16/60 (26%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
 Frame = -2

Query: 422 RCGNMYCSLHRYSDKHDCQFDYRTAARDAIAKANPVVKAEKLDKI--*VSYREEMVAICQ 249
           +C N Y S++RY  K + +   +  A+ ++   N VV      +I   V Y +E+  +C+
Sbjct: 215 KCPNFYLSINRYERKKNIELAIQAFAKASVENTNLVVCGGYDPRIHENVQYLQELTCLCK 274



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>ZFN2B_HUMAN (Q8WV99) AN1-type zinc finger protein 2B|
          Length = 257

 Score = 29.6 bits (65), Expect = 7.6
 Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 2/56 (3%)
 Frame = -2

Query: 491 KRKEGPNRCST--CXKRVGLTGFNCRCGNMYCSLHRYSDKHDCQFDYRTAARDAIA 330
           KRK   N+C    C +R  +     RC   +C  HR+   HDC  +    +R  +A
Sbjct: 92  KRKIFTNKCERAGCRQREMMKLTCERCSRNFCIKHRHPLDHDCSGEGHPTSRAGLA 147



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>SMBP2_HUMAN (P38935) DNA-binding protein SMUBP-2 (EC 3.6.1.-) (ATP-dependent|
            helicase IGHMBP2) (Immunoglobulin mu-binding protein 2)
            (SMUBP-2) (Glial factor 1) (GF-1)
          Length = 993

 Score = 29.6 bits (65), Expect = 7.6
 Identities = 20/74 (27%), Positives = 29/74 (39%), Gaps = 3/74 (4%)
 Frame = -2

Query: 539  PAADVAGTSEAVAVSPKRKEGPNRC--STCXKRVGLTGFNCR-CGNMYCSLHRYSDKHDC 369
            PA D+    +  A+     +  N C  + C   V   G  C+ C   YC  H   + H C
Sbjct: 873  PATDLPTEEDFEALVSAAVKADNTCGFAKCTAGVTTLGQFCQLCSRRYCLSHHLPEIHGC 932

Query: 368  QFDYRTAARDAIAK 327
                R  AR  I++
Sbjct: 933  GERARAHARQRISR 946



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>YVDC_LACLA (Q9CE03) Hypothetical UPF0177 protein yvdC|
          Length = 261

 Score = 29.6 bits (65), Expect = 7.6
 Identities = 26/100 (26%), Positives = 45/100 (45%), Gaps = 14/100 (14%)
 Frame = -2

Query: 305 EKLDKI*VSYREEMVAICQGSSSIFAVPSLHLPFLLAATFPKLYGIVM--HTASWQLQEL 132
           EKL  +   YR  +V I     S  +V   HLPFL+ A    + G++   H + W +  L
Sbjct: 5   EKLQSL-AKYRWVIVIILALLFSALSVSIFHLPFLMTALVLSIVGLIFAYHKSVWLV--L 61

Query: 131 NPLSHSEWFACCV------------TLFMVVFSVSIVASH 48
             LS+    A  +             +F ++F ++I++S+
Sbjct: 62  FILSNLPMLATTIFAYQHHFTTLDTVIFFIIFLLTIISSY 101



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>PRR95_ORYSA (Q689G6) Two-component response regulator-like PRR95|
           (Pseudo-response regulator 95) (OsPRR95)
          Length = 623

 Score = 29.3 bits (64), Expect = 9.9
 Identities = 13/44 (29%), Positives = 25/44 (56%)
 Frame = +1

Query: 478 PSFLLGLTATASLVPATSAAGCTTSAFHVNLSNRHLSARSHSRN 609
           P  L      +S + A  A  C+TSA H++L N++  +++ S++
Sbjct: 368 PFSLYNCRTASSTINAGDAQACSTSATHIDLENKNGDSKTPSQD 411



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>IL17E_HUMAN (Q9H293) Interleukin-17E precursor (IL-17E) (Interleukin-25)|
           (IL-25)
          Length = 177

 Score = 29.3 bits (64), Expect = 9.9
 Identities = 15/31 (48%), Positives = 18/31 (58%), Gaps = 4/31 (12%)
 Frame = +2

Query: 257 LQPFLPCRTPKSCRASLPSPLG----WPWRW 337
           L+P  P R P+SCRAS   PL      PWR+
Sbjct: 62  LEPARPNRHPESCRASEDGPLNSRAISPWRY 92



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>PA2X_BUNFA (P14411) Phospholipase A2 isozyme X, basic (EC 3.1.1.4)|
           (Phosphatidylcholine 2-acylhydrolase)
          Length = 118

 Score = 29.3 bits (64), Expect = 9.9
 Identities = 14/30 (46%), Positives = 14/30 (46%), Gaps = 3/30 (10%)
 Frame = +1

Query: 139 CSCHDAVCITM---PYNLGNVAANKKGRCK 219
           C C  A  I     PYNL N   NKK  CK
Sbjct: 89  CDCDRAAAICFAAAPYNLSNFGINKKTHCK 118


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 83,915,718
Number of Sequences: 219361
Number of extensions: 1829114
Number of successful extensions: 5611
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 5327
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5610
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5710231900
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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