Clone Name | rbasd2i17 |
---|---|
Clone Library Name | barley_pub |
>ISAP1_ORYSA (Q9LLX1) Multiple stress-responsive zinc-finger protein ISAP1| (Stress-associated protein 1) (OsISAP1) Length = 164 Score = 100 bits (250), Expect = 3e-21 Identities = 45/82 (54%), Positives = 59/82 (71%), Gaps = 1/82 (1%) Frame = -2 Query: 539 PAADVAGTSEAVAVSPKRKEGP-NRCSTCXKRVGLTGFNCRCGNMYCSLHRYSDKHDCQF 363 P + ++ A A +P K NRCS C KRVGLTGF CRCG+++C HRYSD+H C + Sbjct: 80 PPVEEMASALATAPAPVAKTSAVNRCSRCRKRVGLTGFRCRCGHLFCGEHRYSDRHGCSY 139 Query: 362 DYRTAARDAIAKANPVVKAEKL 297 DY++AARDAIA+ NPVV+A K+ Sbjct: 140 DYKSAARDAIARDNPVVRAAKI 161
>ZF2N1_ARATH (Q6NNI8) Zinc finger A20 and AN1 domains-containing protein| At1g12440 Length = 168 Score = 99.4 bits (246), Expect = 8e-21 Identities = 43/78 (55%), Positives = 57/78 (73%) Frame = -2 Query: 521 GTSEAVAVSPKRKEGPNRCSTCXKRVGLTGFNCRCGNMYCSLHRYSDKHDCQFDYRTAAR 342 G S A + P K RC +C K+VG+TGF CRCG+ +C HRY + H+CQFD++ AR Sbjct: 92 GDSAAAPLDPP-KSTATRCLSCNKKVGVTGFKCRCGSTFCGTHRYPESHECQFDFKGVAR 150 Query: 341 DAIAKANPVVKAEKLDKI 288 +AIAKANPVVKA+K+D+I Sbjct: 151 EAIAKANPVVKADKVDRI 168
>Z20D2_HUMAN (O76080) Zinc finger A20 domain-containing protein 2 (Zinc finger| protein 216) Length = 213 Score = 99.0 bits (245), Expect = 1e-20 Identities = 47/90 (52%), Positives = 62/90 (68%), Gaps = 3/90 (3%) Frame = -2 Query: 548 VVQPAADVA--GTSEAVAVSPKR-KEGPNRCSTCXKRVGLTGFNCRCGNMYCSLHRYSDK 378 V QP+ V+ TS++ +P+ K NRC C K+VGLTGF+CRCGN++C LHRYSDK Sbjct: 124 VTQPSPSVSQPSTSQSEEKAPELPKPKKNRCFMCRKKVGLTGFDCRCGNLFCGLHRYSDK 183 Query: 377 HDCQFDYRTAARDAIAKANPVVKAEKLDKI 288 H+C +DY+ A I K NPVV AEK+ +I Sbjct: 184 HNCPYDYKAEAAAKIRKENPVVVAEKIQRI 213
>Z20D2_MOUSE (O88878) Zinc finger A20 domain-containing protein 2 (Zinc finger| protein 216) Length = 213 Score = 97.8 bits (242), Expect = 2e-20 Identities = 48/92 (52%), Positives = 60/92 (65%), Gaps = 5/92 (5%) Frame = -2 Query: 548 VVQPAADVAGTS-----EAVAVSPKRKEGPNRCSTCXKRVGLTGFNCRCGNMYCSLHRYS 384 V QP+ V+ S E PK K+ NRC C K+VGLTGF+CRCGN++C LHRYS Sbjct: 124 VTQPSPSVSQPSSSQSEEKAPELPKPKK--NRCFMCRKKVGLTGFDCRCGNLFCGLHRYS 181 Query: 383 DKHDCQFDYRTAARDAIAKANPVVKAEKLDKI 288 DKH+C +DY+ A I K NPVV AEK+ +I Sbjct: 182 DKHNCPYDYKAEAAAKIRKENPVVVAEKIQRI 213
>ZF2N2_ARATH (Q9SJM6) Zinc finger A20 and AN1 domains-containing protein| At2g36320 Length = 161 Score = 94.0 bits (232), Expect = 3e-19 Identities = 40/69 (57%), Positives = 49/69 (71%) Frame = -2 Query: 494 PKRKEGPNRCSTCXKRVGLTGFNCRCGNMYCSLHRYSDKHDCQFDYRTAARDAIAKANPV 315 P + PNRC+ C KRVGLTGF CRCG +C HRY + H C FD+++A R+ IAKANP+ Sbjct: 93 PSPPQRPNRCTVCRKRVGLTGFMCRCGTTFCGSHRYPEVHGCTFDFKSAGREEIAKANPL 152 Query: 314 VKAEKLDKI 288 V A KL KI Sbjct: 153 VIAAKLQKI 161
>ZF2N3_ARATH (Q9SZ69) Zinc finger A20 and AN1 domains-containing protein| At4g12040 Length = 175 Score = 93.6 bits (231), Expect = 4e-19 Identities = 41/88 (46%), Positives = 57/88 (64%), Gaps = 1/88 (1%) Frame = -2 Query: 548 VVQPAADVAGTSEAVAVSPKRKEGPN-RCSTCXKRVGLTGFNCRCGNMYCSLHRYSDKHD 372 V + V +E P R PN RC +C K+VG+ GF C+CG+ +C HRY +KH+ Sbjct: 88 VTAEPSSVPVAAEQDEAEPSRPVRPNNRCFSCNKKVGVMGFKCKCGSTFCGSHRYPEKHE 147 Query: 371 CQFDYRTAARDAIAKANPVVKAEKLDKI 288 C FD++ RDAIAKANP+VKA+K+ +I Sbjct: 148 CSFDFKEVGRDAIAKANPLVKADKVQRI 175
>ZFAN3_HUMAN (Q9H8U3) AN1-type zinc finger protein 3 (Testis-expressed sequence| 27) Length = 227 Score = 48.5 bits (114), Expect = 2e-05 Identities = 24/79 (30%), Positives = 40/79 (50%), Gaps = 3/79 (3%) Frame = -2 Query: 518 TSEAVAVSPKRKEGPNRCSTCXKRVGLTGF---NCRCGNMYCSLHRYSDKHDCQFDYRTA 348 T + S +++ RC C ++ L +CRCG ++C LHR ++HDC FD+ Sbjct: 140 TERSEETSRSKQKSRRRCFQCQTKLELVQQELGSCRCGYVFCMLHRLPEQHDCTFDHMGR 199 Query: 347 ARDAIAKANPVVKAEKLDK 291 R+ ++K KLD+ Sbjct: 200 GRE-----EAIMKMVKLDR 213
>ZFAN3_RAT (Q5U2M7) AN1-type zinc finger protein 3 (Testis-expressed sequence| 27) Length = 227 Score = 46.6 bits (109), Expect = 6e-05 Identities = 22/69 (31%), Positives = 37/69 (53%), Gaps = 3/69 (4%) Frame = -2 Query: 488 RKEGPNRCSTCXKRVGLTGF---NCRCGNMYCSLHRYSDKHDCQFDYRTAARDAIAKANP 318 +++ RC C ++ L +CRCG ++C LHR ++HDC FD+ R+ Sbjct: 150 KQKSRRRCFQCQTKLELVQQELGSCRCGYVFCMLHRLPEQHDCTFDHMGRGRE-----EA 204 Query: 317 VVKAEKLDK 291 ++K KLD+ Sbjct: 205 IMKMVKLDR 213
>ZFAN3_MOUSE (Q497H0) AN1-type zinc finger protein 3 (Testis-expressed sequence| 27) Length = 227 Score = 46.6 bits (109), Expect = 6e-05 Identities = 22/69 (31%), Positives = 37/69 (53%), Gaps = 3/69 (4%) Frame = -2 Query: 488 RKEGPNRCSTCXKRVGLTGF---NCRCGNMYCSLHRYSDKHDCQFDYRTAARDAIAKANP 318 +++ RC C ++ L +CRCG ++C LHR ++HDC FD+ R+ Sbjct: 150 KQKSRRRCFQCQTKLELVQQELGSCRCGYVFCMLHRLPEQHDCTFDHMGRGRE-----EA 204 Query: 317 VVKAEKLDK 291 ++K KLD+ Sbjct: 205 IMKMVKLDR 213
>ZFAN3_XENLA (Q66J85) AN1-type zinc finger protein 3 homolog| Length = 226 Score = 46.6 bits (109), Expect = 6e-05 Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 3/72 (4%) Frame = -2 Query: 497 SPKRKEGPNRCSTCXKRVGLTGF---NCRCGNMYCSLHRYSDKHDCQFDYRTAARDAIAK 327 S +++ RC C ++ L +CRCG ++C LHR ++HDC FD+ R+ Sbjct: 146 SRSKQKSRRRCFRCQIKLELVQQELGSCRCGYVFCMLHRLPEQHDCTFDHMGRGRE---- 201 Query: 326 ANPVVKAEKLDK 291 ++K KLD+ Sbjct: 202 -EAIMKMVKLDR 212
>ZFN2B_RAT (Q4KLG9) AN1-type zinc finger protein 2B| Length = 257 Score = 33.5 bits (75), Expect = 0.52 Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 2/56 (3%) Frame = -2 Query: 491 KRKEGPNRC--STCXKRVGLTGFNCRCGNMYCSLHRYSDKHDCQFDYRTAARDAIA 330 KRK N+C S C +R + RCG +C HR+ HDC + +R +A Sbjct: 92 KRKIFTNKCERSGCRQREMMKLTCDRCGRNFCIKHRHPLDHDCSGEGHPTSRAGLA 147
>ZFN2B_MOUSE (Q91X58) AN1-type zinc finger protein 2B| Length = 257 Score = 32.0 bits (71), Expect = 1.5 Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 2/56 (3%) Frame = -2 Query: 491 KRKEGPNRC--STCXKRVGLTGFNCRCGNMYCSLHRYSDKHDCQFDYRTAARDAIA 330 KRK N+C S C +R + RCG +C HR+ H+C + +R +A Sbjct: 92 KRKIFTNKCERSGCRQREMMKLTCDRCGRNFCIKHRHPLDHECSGEGHQTSRAGLA 147
>NORQ_PARDE (Q51664) Protein norQ| Length = 270 Score = 31.6 bits (70), Expect = 2.0 Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 1/38 (2%) Frame = -1 Query: 300 ARQDLGVL-QGRNGCNLPRFIIHLCCAILAPPFLVGCH 190 A DL VL +G GC RF+ H+ + P + V CH Sbjct: 32 AANDLPVLLKGPTGCGKTRFVAHMAARLGRPLYTVACH 69
>CO9_MOUSE (P06683) Complement component C9 precursor| Length = 548 Score = 30.8 bits (68), Expect = 3.4 Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 2/50 (4%) Frame = -2 Query: 470 RCST--CXKRVGLTGFNCRCGNMYCSLHRYSDKHDCQFDYRTAARDAIAK 327 +C T C KR L + CG+ YSD++DC D RT RD +A+ Sbjct: 104 QCETGRCIKRRLLCNGDNDCGD-------YSDENDCDDDPRTPCRDRVAE 146
>VG40_ICHV1 (Q00145) Hypothetical gene 40 protein| Length = 136 Score = 30.4 bits (67), Expect = 4.4 Identities = 27/111 (24%), Positives = 48/111 (43%), Gaps = 15/111 (13%) Frame = -3 Query: 304 RSSTRFRCPTGKKWLQSAKVHHPSLLCHPCTSLSCWLPHFLNCTAS*CTLRRGSCKNSIL 125 RS++ F C + L ++ PS+ CT+ SCW H L +++ +RR S + Sbjct: 26 RSNSWFVCKIVYRCLSPRRIISPSI----CTAFSCWANHGLRLSST-AAMRRSSSSTFLF 80 Query: 124 SV---IPNGLRVV*LY---------SWWFF---RSVLWLLILASSVLCTXV 17 + + V ++ +W F S+LW +I +S LC + Sbjct: 81 MASTRMSSSTFVCFIFVFCVSRTAMVFWSFSESTSLLWCIISSSMRLCFSI 131
>ALG2_CANGA (Q6FJJ9) Alpha-1,3-mannosyltransferase ALG2 (EC 2.4.1.-)| (GDP-Man:Man(1)GlcNAc(2)-PP-dolichol mannosyltransferase) (Asparagine-linked glycosylation protein 2) Length = 458 Score = 29.6 bits (65), Expect = 7.6 Identities = 16/60 (26%), Positives = 30/60 (50%), Gaps = 2/60 (3%) Frame = -2 Query: 422 RCGNMYCSLHRYSDKHDCQFDYRTAARDAIAKANPVVKAEKLDKI--*VSYREEMVAICQ 249 +C N Y S++RY K + + + A+ ++ N VV +I V Y +E+ +C+ Sbjct: 215 KCPNFYLSINRYERKKNIELAIQAFAKASVENTNLVVCGGYDPRIHENVQYLQELTCLCK 274
>ZFN2B_HUMAN (Q8WV99) AN1-type zinc finger protein 2B| Length = 257 Score = 29.6 bits (65), Expect = 7.6 Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 2/56 (3%) Frame = -2 Query: 491 KRKEGPNRCST--CXKRVGLTGFNCRCGNMYCSLHRYSDKHDCQFDYRTAARDAIA 330 KRK N+C C +R + RC +C HR+ HDC + +R +A Sbjct: 92 KRKIFTNKCERAGCRQREMMKLTCERCSRNFCIKHRHPLDHDCSGEGHPTSRAGLA 147
>SMBP2_HUMAN (P38935) DNA-binding protein SMUBP-2 (EC 3.6.1.-) (ATP-dependent| helicase IGHMBP2) (Immunoglobulin mu-binding protein 2) (SMUBP-2) (Glial factor 1) (GF-1) Length = 993 Score = 29.6 bits (65), Expect = 7.6 Identities = 20/74 (27%), Positives = 29/74 (39%), Gaps = 3/74 (4%) Frame = -2 Query: 539 PAADVAGTSEAVAVSPKRKEGPNRC--STCXKRVGLTGFNCR-CGNMYCSLHRYSDKHDC 369 PA D+ + A+ + N C + C V G C+ C YC H + H C Sbjct: 873 PATDLPTEEDFEALVSAAVKADNTCGFAKCTAGVTTLGQFCQLCSRRYCLSHHLPEIHGC 932 Query: 368 QFDYRTAARDAIAK 327 R AR I++ Sbjct: 933 GERARAHARQRISR 946
>YVDC_LACLA (Q9CE03) Hypothetical UPF0177 protein yvdC| Length = 261 Score = 29.6 bits (65), Expect = 7.6 Identities = 26/100 (26%), Positives = 45/100 (45%), Gaps = 14/100 (14%) Frame = -2 Query: 305 EKLDKI*VSYREEMVAICQGSSSIFAVPSLHLPFLLAATFPKLYGIVM--HTASWQLQEL 132 EKL + YR +V I S +V HLPFL+ A + G++ H + W + L Sbjct: 5 EKLQSL-AKYRWVIVIILALLFSALSVSIFHLPFLMTALVLSIVGLIFAYHKSVWLV--L 61 Query: 131 NPLSHSEWFACCV------------TLFMVVFSVSIVASH 48 LS+ A + +F ++F ++I++S+ Sbjct: 62 FILSNLPMLATTIFAYQHHFTTLDTVIFFIIFLLTIISSY 101
>PRR95_ORYSA (Q689G6) Two-component response regulator-like PRR95| (Pseudo-response regulator 95) (OsPRR95) Length = 623 Score = 29.3 bits (64), Expect = 9.9 Identities = 13/44 (29%), Positives = 25/44 (56%) Frame = +1 Query: 478 PSFLLGLTATASLVPATSAAGCTTSAFHVNLSNRHLSARSHSRN 609 P L +S + A A C+TSA H++L N++ +++ S++ Sbjct: 368 PFSLYNCRTASSTINAGDAQACSTSATHIDLENKNGDSKTPSQD 411
>IL17E_HUMAN (Q9H293) Interleukin-17E precursor (IL-17E) (Interleukin-25)| (IL-25) Length = 177 Score = 29.3 bits (64), Expect = 9.9 Identities = 15/31 (48%), Positives = 18/31 (58%), Gaps = 4/31 (12%) Frame = +2 Query: 257 LQPFLPCRTPKSCRASLPSPLG----WPWRW 337 L+P P R P+SCRAS PL PWR+ Sbjct: 62 LEPARPNRHPESCRASEDGPLNSRAISPWRY 92
>PA2X_BUNFA (P14411) Phospholipase A2 isozyme X, basic (EC 3.1.1.4)| (Phosphatidylcholine 2-acylhydrolase) Length = 118 Score = 29.3 bits (64), Expect = 9.9 Identities = 14/30 (46%), Positives = 14/30 (46%), Gaps = 3/30 (10%) Frame = +1 Query: 139 CSCHDAVCITM---PYNLGNVAANKKGRCK 219 C C A I PYNL N NKK CK Sbjct: 89 CDCDRAAAICFAAAPYNLSNFGINKKTHCK 118 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 83,915,718 Number of Sequences: 219361 Number of extensions: 1829114 Number of successful extensions: 5611 Number of sequences better than 10.0: 22 Number of HSP's better than 10.0 without gapping: 5327 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5610 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5710231900 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)