>emb|X97771.1|HVPSII10K H.vulgare mRNA for PSII 10kD protein
          Length = 575

 Score =  268 bits (135), Expect = 4e-69
 Identities = 141/144 (97%)
 Strand = Plus / Minus

                                                                       
Query: 1   cgggtagtgatatttgnatccattacatatgtcctgacggttataatccgcactattata 60
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 cgggtagtgatatttgtatccattacatatgtcctgacggttataatccgcactattata 485

                                                                       
Query: 61  cacatcgtttggtgcatagctnggtttgctgcacataggcttnaggaagccaaggcgcta 120
           ||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||
Sbjct: 484 cacatcgtttggtgcatagcttggtttgctgcacataggcttcaggaagccaaggcgcta 425

                                   
Query: 121 gtactgtagacaagaagagcaccg 144
           ||||||||||||||||||||||||
Sbjct: 424 gtactgtagacaagaagagcaccg 401

>ref|XM_476620.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 405

 Score = 60.0 bits (30), Expect = 2e-06
 Identities = 36/38 (94%)
 Strand = Plus / Minus

                                                 
Query: 106 gaagccaaggcgctagtactgtagacaagaagagcacc 143
           ||||||||||| |||||| |||||||||||||||||||
Sbjct: 401 gaagccaaggcactagtattgtagacaagaagagcacc 364

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 60.0 bits (30), Expect = 2e-06
 Identities = 36/38 (94%)
 Strand = Plus / Minus

                                                     
Query: 106     gaagccaaggcgctagtactgtagacaagaagagcacc 143
               ||||||||||| |||||| |||||||||||||||||||
Sbjct: 2490115 gaagccaaggcactagtattgtagacaagaagagcacc 2490078

>dbj|AP004263.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0022E03
          Length = 163032

 Score = 60.0 bits (30), Expect = 2e-06
 Identities = 36/38 (94%)
 Strand = Plus / Minus

                                                   
Query: 106   gaagccaaggcgctagtactgtagacaagaagagcacc 143
             ||||||||||| |||||| |||||||||||||||||||
Sbjct: 55095 gaagccaaggcactagtattgtagacaagaagagcacc 55058

>gb|AC113547.27| Mus musculus chromosome 12, clone RP23-263J2, complete sequence
          Length = 197242

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 120  agtactgtagacaagaagag 139
            ||||||||||||||||||||
Sbjct: 4569 agtactgtagacaagaagag 4550

>gb|AC154300.2| Mus musculus BAC clone RP23-390F4 from 12, complete sequence
          Length = 187014

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 120    agtactgtagacaagaagag 139
              ||||||||||||||||||||
Sbjct: 166431 agtactgtagacaagaagag 166412

>emb|BX897699.1| Bartonella henselae strain Houston-1, complete genome
          Length = 1931047

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 122   tactgtagacaagaagagc 140
             |||||||||||||||||||
Sbjct: 28001 tactgtagacaagaagagc 28019

>dbj|AB210421.1| Ciona intestinalis mRNA for transcription factor protein, complete
           cds, clone: citb004m11
          Length = 2001

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 63  catcgtttggtgcatagct 81
           |||||||||||||||||||
Sbjct: 461 catcgtttggtgcatagct 443

>dbj|AK116021.1| Ciona intestinalis cDNA, clone:citb004m11, full insert sequence
          Length = 2001

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 63  catcgtttggtgcatagct 81
           |||||||||||||||||||
Sbjct: 461 catcgtttggtgcatagct 443


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 697,662
Number of Sequences: 3902068
Number of extensions: 697662
Number of successful extensions: 37918
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 37887
Number of HSP's gapped (non-prelim): 31
length of query: 146
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 125
effective length of database: 17,151,101,840
effective search space: 2143887730000
effective search space used: 2143887730000
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)