ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd2h21 |
|---|---|
| Clone Library Name | barley_pub |
>CY561_SHEEP (Q95204) Cytochrome b561 (Cytochrome b-561)| Length = 252 Score = 78.6 bits (192), Expect = 1e-14 Identities = 39/97 (40%), Positives = 56/97 (57%) Frame = -1 Query: 615 FKNHNETEIANLYSLHSWLGIGTISLYGIQWIFGFLTFFFPKAAPNVRKGALPWHVLLGI 436 F++H + A+LYSLHSW GI +L+ QW+ GF F FP A+ ++R P HV G Sbjct: 107 FEHHRKKGYADLYSLHSWCGILVFALFFAQWLVGFSFFLFPGASFSLRSRYRPQHVFFGA 166 Query: 435 FVYILALATAELGFLEKLTFLQSSGIDKYGPESFLVN 325 +++L++ATA LG E L F + + PE L N Sbjct: 167 AIFLLSVATALLGLKEALLFELGTKYSTFEPEGVLAN 203
>CY561_BOVIN (P10897) Cytochrome b561 (Cytochrome b-561)| Length = 252 Score = 78.6 bits (192), Expect = 1e-14 Identities = 39/97 (40%), Positives = 56/97 (57%) Frame = -1 Query: 615 FKNHNETEIANLYSLHSWLGIGTISLYGIQWIFGFLTFFFPKAAPNVRKGALPWHVLLGI 436 F++H + A+LYSLHSW GI +L+ QW+ GF F FP A+ ++R P HV G Sbjct: 107 FEHHRKKGYADLYSLHSWCGILVFALFFAQWLVGFSFFLFPGASFSLRSRYRPQHVFFGA 166 Query: 435 FVYILALATAELGFLEKLTFLQSSGIDKYGPESFLVN 325 +++L++ATA LG E L F + + PE L N Sbjct: 167 AIFLLSVATALLGLKEALLFELGTKYSMFEPEGVLAN 203
>CY561_MOUSE (Q60720) Cytochrome b561 (Cytochrome b-561)| Length = 250 Score = 76.6 bits (187), Expect = 5e-14 Identities = 38/97 (39%), Positives = 52/97 (53%) Frame = -1 Query: 615 FKNHNETEIANLYSLHSWLGIGTISLYGIQWIFGFLTFFFPKAAPNVRKGALPWHVLLGI 436 F H + A+LYSLHSW GI LY +QW+ GF F FP A+ ++R P H+ G Sbjct: 105 FDYHKKKGYADLYSLHSWCGILVFVLYFVQWLVGFSFFLFPGASFSLRSRYRPQHIFFGA 164 Query: 435 FVYILALATAELGFLEKLTFLQSSGIDKYGPESFLVN 325 +++ ++ TA LG E L F S + PE L N Sbjct: 165 TIFLFSVGTALLGLKEALLFKLGSKYSTFEPEGVLAN 201
>CY561_PONPY (Q5RCZ2) Cytochrome b561 (Cytochrome b-561)| Length = 251 Score = 76.3 bits (186), Expect = 7e-14 Identities = 38/97 (39%), Positives = 52/97 (53%) Frame = -1 Query: 615 FKNHNETEIANLYSLHSWLGIGTISLYGIQWIFGFLTFFFPKAAPNVRKGALPWHVLLGI 436 F H + A+LYSLHSW GI LY +QW+ GF F FP A+ ++R P H+ G Sbjct: 106 FDYHRKEGYADLYSLHSWCGILVFVLYFVQWLVGFSFFLFPGASFSLRSRYRPQHIFFGA 165 Query: 435 FVYILALATAELGFLEKLTFLQSSGIDKYGPESFLVN 325 +++L++ TA LG E L F + PE L N Sbjct: 166 TIFLLSVGTALLGLKEALLFKLRDKYSAFEPEGVLAN 202
>CY561_HUMAN (P49447) Cytochrome b561 (Cytochrome b-561)| Length = 251 Score = 76.3 bits (186), Expect = 7e-14 Identities = 38/97 (39%), Positives = 52/97 (53%) Frame = -1 Query: 615 FKNHNETEIANLYSLHSWLGIGTISLYGIQWIFGFLTFFFPKAAPNVRKGALPWHVLLGI 436 F H + A+LYSLHSW GI LY +QW+ GF F FP A+ ++R P H+ G Sbjct: 106 FDYHRKKGYADLYSLHSWCGILVFVLYFVQWLVGFSFFLFPGASFSLRSRYRPQHIFFGA 165 Query: 435 FVYILALATAELGFLEKLTFLQSSGIDKYGPESFLVN 325 +++L++ TA LG E L F + PE L N Sbjct: 166 TIFLLSVGTALLGLKEALLFNLGGKYSAFEPEGVLAN 202
>CY561_PIG (Q95245) Cytochrome b561 (Cytochrome b-561)| Length = 252 Score = 69.7 bits (169), Expect = 6e-12 Identities = 37/97 (38%), Positives = 51/97 (52%) Frame = -1 Query: 615 FKNHNETEIANLYSLHSWLGIGTISLYGIQWIFGFLTFFFPKAAPNVRKGALPWHVLLGI 436 F H + IA+LYSLHSW GI L+ QW+ G F FP A+ ++R P HV G Sbjct: 107 FDYHRKKGIADLYSLHSWCGILVFVLFLAQWLVGLGFFLFPGASFSLRSRYRPQHVFFGA 166 Query: 435 FVYILALATAELGFLEKLTFLQSSGIDKYGPESFLVN 325 +++L++ TA LG E L F + + E L N Sbjct: 167 AIFLLSVGTALLGLKEALLFQLGTKYSAFESEGVLAN 203
>CY561_XENLA (Q91577) Cytochrome b561 (Cytochrome b-561)| Length = 247 Score = 67.8 bits (164), Expect = 2e-11 Identities = 38/97 (39%), Positives = 51/97 (52%) Frame = -1 Query: 615 FKNHNETEIANLYSLHSWLGIGTISLYGIQWIFGFLTFFFPKAAPNVRKGALPWHVLLGI 436 F+ H ++YSLHSW GI T +LY +QWI GF FF P A R P H G Sbjct: 106 FQYHQANGYPDMYSLHSWCGIVTFTLYILQWIIGFSLFFIPGVAFTYRSQFKPLHEFFGR 165 Query: 435 FVYILALATAELGFLEKLTFLQSSGIDKYGPESFLVN 325 +++ ++AT+ LG EK+ SS + E LVN Sbjct: 166 ALFLSSIATSLLGLTEKMFSEYSS----HPAEGILVN 198
>CY561_CAEEL (P34465) Putative cytochrome b561 (Cytochrome b-561)| Length = 266 Score = 67.8 bits (164), Expect = 2e-11 Identities = 28/73 (38%), Positives = 44/73 (60%) Frame = -1 Query: 603 NETEIANLYSLHSWLGIGTISLYGIQWIFGFLTFFFPKAAPNVRKGALPWHVLLGIFVYI 424 N I NL SLHSW+G+ + LY Q+I GF+T+FFP +R+ +P+H + G+ ++I Sbjct: 128 NPAPIVNLVSLHSWIGLSVVILYFAQYIVGFITYFFPGMPIPIRQLVMPFHQMFGVLIFI 187 Query: 423 LALATAELGFLEK 385 T +G E+ Sbjct: 188 FVSITVAMGISER 200
>EX7L_ZYMMO (Q9FDL4) Probable exodeoxyribonuclease VII large subunit (EC| 3.1.11.6) (Exonuclease VII large subunit) Length = 544 Score = 30.8 bits (68), Expect = 3.3 Identities = 25/81 (30%), Positives = 37/81 (45%), Gaps = 6/81 (7%) Frame = -3 Query: 586 ELVQSAFLAWNRNNFSIWYSVDIWILDLLLPQGCAKCEEGCSSL------ARTSWNLRLH 425 ELV + W +N +W + D +L +G A+ E+ S + A+T L L Sbjct: 453 ELVTARLNIWQKNIDQLWRVAEQAHPDKILAKGYARVEDSHSHVVSNAHDAKTHKRLNLI 512 Query: 424 FSPGNGRTWVSGEAHLPPKLR 362 F +G WV+ E PPK R Sbjct: 513 FH--DGSVWVAPET--PPKSR 529
>CP4CU_BLAGE (Q964T1) Cytochrome P450 4c21 (EC 1.14.14.1) (CYPIVC21)| Length = 501 Score = 30.0 bits (66), Expect = 5.7 Identities = 21/64 (32%), Positives = 29/64 (45%), Gaps = 16/64 (25%) Frame = -1 Query: 612 KNHNETEIANLYSL-HSWLGIGTISLYGIQW---------------IFGFLTFFFPKAAP 481 +N + A LY L HSWLG G ++ G +W + GF+T F K+ Sbjct: 95 RNTQLIDKAFLYDLFHSWLGTGLLTSSGAKWHQHRKIITPTFHFSILEGFITIFAEKSEI 154 Query: 480 NVRK 469 VRK Sbjct: 155 LVRK 158
>MATK_LATCL (Q9TIR8) Maturase K (Intron maturase)| Length = 511 Score = 30.0 bits (66), Expect = 5.7 Identities = 9/24 (37%), Positives = 18/24 (75%), Gaps = 1/24 (4%) Frame = +1 Query: 187 FLFMQ-YTSHILVFWDWSVTLWFF 255 FLF++ + ++++FW W +LWF+ Sbjct: 294 FLFVKKWKCYLIIFWQWHFSLWFY 317
>PTTBC_ECOLI (P36672) PTS system trehalose-specific EIIBC component (EIIBC-Tre)| (EII-Tre) [Includes: Trehalose-specific phosphotransferase enzyme IIB component (EC 2.7.1.69) (PTS system trehalose-specific EIIB component); Trehalose permease IIC component Length = 473 Score = 29.6 bits (65), Expect = 7.4 Identities = 12/34 (35%), Positives = 21/34 (61%) Frame = -1 Query: 612 KNHNETEIANLYSLHSWLGIGTISLYGIQWIFGF 511 + HNE EI+ ++ +WLG+ ++YGI + F Sbjct: 364 RKHNEREISVPAAISAWLGVTEPAMYGINLKYRF 397
>ASPM_BOVIN (P62285) Abnormal spindle-like microcephaly-associated protein| homolog (Fragment) Length = 3371 Score = 29.6 bits (65), Expect = 7.4 Identities = 17/71 (23%), Positives = 33/71 (46%) Frame = +3 Query: 351 ICRCLSFGGR*ASPETQVLPLPGLKCKRRFQEVRAKEEHPSSHLAQPWGRRRSRIQISTE 530 IC +F G A + + +RRF+ + + S W +R+ R ++ T Sbjct: 2160 ICIQAAFRGMRARRRLKAMHSAAAVIQRRFRTLGMRRRFLSLRKTAVWVQRKYRAKVCTR 2219 Query: 531 YHIEKLFLFQA 563 +H+++L L +A Sbjct: 2220 HHVQQLRLQKA 2230
>MATK_EPIVI (P30071) Maturase K (Intron maturase)| Length = 439 Score = 29.3 bits (64), Expect = 9.7 Identities = 8/22 (36%), Positives = 14/22 (63%) Frame = +1 Query: 199 QYTSHILVFWDWSVTLWFFKAS 264 ++ +++ FW W +LWFF S Sbjct: 232 KWKCYVITFWQWYFSLWFFSRS 253
>SFT2_YEAST (P38166) Protein SFT2| Length = 215 Score = 29.3 bits (64), Expect = 9.7 Identities = 18/54 (33%), Positives = 23/54 (42%) Frame = -1 Query: 540 LYGIQWIFGFLTFFFPKAAPNVRKGALPWHVLLGIFVYILALATAELGFLEKLT 379 L G F TF FP A RK L W + +FV + L +L+ LT Sbjct: 88 LLGATACFTLCTFLFPVLAAKPRKFGLLWTMGSLLFVLAFGVLMGPLAYLKHLT 141 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 86,505,861 Number of Sequences: 219361 Number of extensions: 1776785 Number of successful extensions: 4605 Number of sequences better than 10.0: 15 Number of HSP's better than 10.0 without gapping: 4463 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4604 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5596027262 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
