>YO125_YEAST (Q12383) Uncharacterized protein YOL125W|
          Length = 476

 Score = 30.0 bits (66), Expect = 1.6
 Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
 Frame = +2

Query: 59  LTRAHQNNFTCVQQNI---SASVSAQKKNPTSAESHIKRVPQRLDENH 193
           +TR+ QN +     N+   +A+     KN + AE   +RVP  LD NH
Sbjct: 34  MTRSSQNLYCSEHLNLMKKAANSQVHNKNGSEAEKERERVPCPLDPNH 81

>YL333_MIMIV (Q5UQS0) Hypothetical protein L333|
          Length = 203

 Score = 30.0 bits (66), Expect = 1.6
 Identities = 16/54 (29%), Positives = 25/54 (46%)
 Frame = +2

Query: 101 NISASVSAQKKNPTSAESHIKRVPQRLDENHKFLLILFLCTIEDKKCKARYKVK 262
           ++S+S S   KN  S E  I R+   +D    +   + +CTI   KC     +K
Sbjct: 33  SLSSSSSVISKNDLSREKIINRIKNLIDNKFSYNKNIKICTIIKNKCMIIQTIK 86

>CR015_HUMAN (Q96N68) Protein C18orf15|
          Length = 181

 Score = 28.9 bits (63), Expect = 3.5
 Identities = 8/29 (27%), Positives = 15/29 (51%)
 Frame = -1

Query: 148 CTCWVLFLCTYTCRNILLYTCKIILMCPC 62
           C C  + +C + C  + +  C ++ MC C
Sbjct: 128 CMCACMCVCVHVCACVYVCMCVLVCMCAC 156

>SEPT3_MOUSE (Q9Z1S5) Neuronal-specific septin-3|
          Length = 465

 Score = 28.5 bits (62), Expect = 4.6
 Identities = 15/60 (25%), Positives = 28/60 (46%), Gaps = 4/60 (6%)
 Frame = -1

Query: 178 SLWNSLYVRFCTCWVLFLCTYTCRNILLYTCKI----ILMCPC*ALTLMCGVRDDVLYLW 11
           S+ +S+ V  C C  +++C     +  +Y C +    + +C C  + +  GVR     LW
Sbjct: 367 SILSSVCVCVCVCVCMYVCMCVMESACVYVCVMESACVCVCMCVYVCVYSGVRYFHCPLW 426

>YK17_SCHPO (Q9HDY3) Membrane protein PB1A10.07c|
          Length = 441

 Score = 28.1 bits (61), Expect = 6.0
 Identities = 15/63 (23%), Positives = 28/63 (44%), Gaps = 4/63 (6%)
 Frame = -1

Query: 262 FHFVACFALLVFYCAEEEDEKKLVVLIQSLWNSLYVR----FCTCWVLFLCTYTCRNILL 95
           FH V  F L  FY A          + ++  N ++VR    +   WV  + ++ C  + +
Sbjct: 369 FHIV--FVLAAFYTASLLTNWNTTSVYENQKNDVFVRIGFSYAAVWVKIITSWVCHGLYV 426

Query: 94  YTC 86
           ++C
Sbjct: 427 WSC 429

>IF2_HELPY (P55972) Translation initiation factor IF-2|
          Length = 944

 Score = 28.1 bits (61), Expect = 6.0
 Identities = 13/25 (52%), Positives = 17/25 (68%)
 Frame = +2

Query: 92  VQQNISASVSAQKKNPTSAESHIKR 166
           ++QNI+  V  Q+KNP   ES IKR
Sbjct: 322 IRQNINDRVRVQRKNPWMNESGIKR 346

>NUP88_MOUSE (Q8CEC0) Nuclear pore complex protein Nup88 (Nucleoporin Nup88) (88|
           kDa nuclear pore complex protein)
          Length = 753

 Score = 28.1 bits (61), Expect = 6.0
 Identities = 20/61 (32%), Positives = 26/61 (42%), Gaps = 3/61 (4%)
 Frame = +2

Query: 89  CVQQNISASVSAQK---KNPTSAESHIKRVPQRLDENHKFLLILFLCTIEDKKCKARYKV 259
           C Q++   + S  +   + P S E HIKR+ QR   N  FL          K C AR   
Sbjct: 508 CTQEDAEVAESPLRILAETPDSFEKHIKRILQRSAANPAFL----------KNCSARSSE 557

Query: 260 K 262
           K
Sbjct: 558 K 558

>TARA_HUMAN (Q9H2D6) TRIO and F-actin-binding protein (Protein Tara)|
           (Trio-associated repeat on actin)
          Length = 2365

 Score = 28.1 bits (61), Expect = 6.0
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = +2

Query: 77  NNFTCVQQNISASVSAQKKNPTSA 148
           N  TC+QQNI  S S Q+ NP ++
Sbjct: 814 NPRTCIQQNIPRSSSTQQDNPKTS 837

>GERM_BACSU (P39072) Germination protein gerM|
          Length = 366

 Score = 27.7 bits (60), Expect = 7.8
 Identities = 14/41 (34%), Positives = 21/41 (51%)
 Frame = -1

Query: 286 INISNSGTFHFVACFALLVFYCAEEEDEKKLVVLIQSLWNS 164
           IN+  +G     A   L V+Y AE ED +  V + + + NS
Sbjct: 210 INLETAGVNDLTATHPLTVYYLAENEDSEYYVPVTKRIDNS 250

>CAC1H_HUMAN (O95180) Voltage-dependent T-type calcium channel alpha-1H subunit|
            (Voltage-gated calcium channel alpha subunit Cav3.2)
            (Low-voltage-activated calcium channel alpha1 3.2
            subunit)
          Length = 2353

 Score = 27.7 bits (60), Expect = 7.8
 Identities = 14/43 (32%), Positives = 26/43 (60%)
 Frame = -1

Query: 202  KKLVVLIQSLWNSLYVRFCTCWVLFLCTYTCRNILLYTCKIIL 74
            ++LVVL++++ N     FCT  +LF+  ++   + L+ CK  L
Sbjct: 903  RQLVVLVKTMDN--VATFCTLLMLFIFIFSILGMHLFGCKFSL 943


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 42,893,155
Number of Sequences: 219361
Number of extensions: 808635
Number of successful extensions: 2414
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2346
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2407
length of database: 80,573,946
effective HSP length: 72
effective length of database: 64,779,954
effective search space used: 1554718896
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)