ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd2h14
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ref|NM_196818.1| Oryza sativa (japonica cultivar-group) putative... 252 1e-63
2dbj|AK099882.1| Oryza sativa (japonica cultivar-group) cDNA clon... 252 1e-63
3dbj|AK066867.1| Oryza sativa (japonica cultivar-group) cDNA clon... 252 1e-63
4gb|AY835457.1| Saccharum officinarum glutamine synthetase (GSI) ... 226 6e-56
5gb|AY109282.1| Zea mays PCO137630 mRNA sequence 190 3e-45
6gb|AC025905.3| Oryza sativa (japonica cultivar-group) chromosome... 159 1e-35
7dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 159 1e-35
8gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 159 1e-35
9emb|AJ238212.1|MTR238212 Medicago truncatula mRNA for glutamine ... 44 0.44
10gb|DQ059188.1| Neriacanthus purdieanus ribosomal protein S16 (rp... 42 1.7
11gb|AC074032.24| Homo sapiens 12 BAC RP4-605O3 (Roswell Park Canc... 42 1.7
12emb|BX000468.5| Zebrafish DNA sequence from clone DKEY-1J5 in li... 42 1.7
13emb|CR956368.6| M.truncatula DNA sequence from clone MTH2-64D19 ... 42 1.7
14ref|NM_189656.1| Oryza sativa (japonica cultivar-group), predic... 40 6.9
15gb|BC077527.1| Xenopus laevis MGC83232 protein, mRNA (cDNA clone... 40 6.9
16gb|BC077521.1| Xenopus laevis MGC83098 protein, mRNA (cDNA clone... 40 6.9
17gb|BC042872.1| Homo sapiens transmembrane protein 26, mRNA (cDNA... 40 6.9
18ref|XM_590478.2| PREDICTED: Bos taurus similar to RIKEN cDNA 643... 40 6.9
19dbj|AK124367.1| Homo sapiens cDNA FLJ42376 fis, clone UTERU2035323 40 6.9
20gb|AC068892.7| Homo sapiens chromosome 10 clone RP11-116D21, com... 40 6.9
21gb|AC080166.6| Homo sapiens BAC clone RP11-813C7 from 2, complet... 40 6.9
22gb|AE000782.1| Archaeoglobus fulgidus DSM 4304, complete genome 40 6.9
23emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB ... 40 6.9
24emb|AL732317.13| Mouse DNA sequence from clone RP23-139F8 on chr... 40 6.9

>ref|NM_196818.1| Oryza sativa (japonica cultivar-group) putative glutamine synthetase
            (OSJNBa0018F16.4), mRNA
          Length = 2739

 Score =  252 bits (127), Expect = 1e-63
 Identities = 318/382 (83%), Gaps = 6/382 (1%)
 Strand = Plus / Minus

                                                                        
Query: 123  tagtaacggtgaatgagatcgccaaatgccccagggttcttcgagtaatgatcaatctcc 182
            ||||||||||||||||||||| | |||||  |||||||||||  ||| ||||| ||||| 
Sbjct: 2519 tagtaacggtgaatgagatcggcgaatgctgcagggttcttctcgtagtgatcgatctca 2460

                                                                        
Query: 183  gccttgcgtacagcgataacagctgtaataagcttattcccgattagctcatgcaaagtt 242
            ||||| |||||||| ||||| || || | ||| ||||  ||||| |  |||||||   ||
Sbjct: 2459 gcctttcgtacagcaataacggcagtgacaagtttatcgccgatcaattcatgcatgatt 2400

                                                                        
Query: 243  ttgtctgcagcaagtgattctacagattccagcaagtcctgcggtagccttttgagcttg 302
            ||||||||||| |||| ||| |||||||||| |||||||| ||| | |||||||||||||
Sbjct: 2399 ttgtctgcagctagtgcttcgacagattccatcaagtccttcggcatccttttgagcttg 2340

                                                                        
Query: 303  gta------gcataatctgcaggatttgattcaattggttcaggcaactcaaggccgttc 356
            |        |||||| ||||||| ||||||||| ||||||||||||||  |||||   ||
Sbjct: 2339 gagttggaggcataacctgcagggtttgattcagttggttcaggcaacgtaaggcttctc 2280

                                                                        
Query: 357  ctaagtccatcaatcccagcagcgacaatagcagcaagccccaagtgcggatttgcgcac 416
            || |||||||||||||||||||| || ||||||||||| ||||||||||| |||||||||
Sbjct: 2279 ctgagtccatcaatcccagcagcaactatagcagcaaggcccaagtgcgggtttgcgcac 2220

                                                                        
Query: 417  ccatcaaatgatttaatttcgaagttgctgaccatgtcgagaggcacaccaggtgggcat 476
             |||| || ||||||||||||||||||||||| |  || ||||| |  ||||||||||||
Sbjct: 2219 gcatcgaaggatttaatttcgaagttgctgacgagatcaagaggtatcccaggtgggcat 2160

                                  
Query: 477  gcggttctcaatggagcctccc 498
            || ||||||| |||||||||||
Sbjct: 2159 gcagttctcagtggagcctccc 2138



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>dbj|AK099882.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013111O16, full
            insert sequence
          Length = 3106

 Score =  252 bits (127), Expect = 1e-63
 Identities = 318/382 (83%), Gaps = 6/382 (1%)
 Strand = Plus / Minus

                                                                        
Query: 123  tagtaacggtgaatgagatcgccaaatgccccagggttcttcgagtaatgatcaatctcc 182
            ||||||||||||||||||||| | |||||  |||||||||||  ||| ||||| ||||| 
Sbjct: 2884 tagtaacggtgaatgagatcggcgaatgctgcagggttcttctcgtagtgatcgatctca 2825

                                                                        
Query: 183  gccttgcgtacagcgataacagctgtaataagcttattcccgattagctcatgcaaagtt 242
            ||||| |||||||| ||||| || || | ||| ||||  ||||| |  |||||||   ||
Sbjct: 2824 gcctttcgtacagcaataacggcagtgacaagtttatcgccgatcaattcatgcatgatt 2765

                                                                        
Query: 243  ttgtctgcagcaagtgattctacagattccagcaagtcctgcggtagccttttgagcttg 302
            ||||||||||| |||| ||| |||||||||| |||||||| ||| | |||||||||||||
Sbjct: 2764 ttgtctgcagctagtgcttcgacagattccatcaagtccttcggcatccttttgagcttg 2705

                                                                        
Query: 303  gta------gcataatctgcaggatttgattcaattggttcaggcaactcaaggccgttc 356
            |        |||||| ||||||| ||||||||| ||||||||||||||  |||||   ||
Sbjct: 2704 gagttggaggcataacctgcagggtttgattcagttggttcaggcaacgtaaggcttctc 2645

                                                                        
Query: 357  ctaagtccatcaatcccagcagcgacaatagcagcaagccccaagtgcggatttgcgcac 416
            || |||||||||||||||||||| || ||||||||||| ||||||||||| |||||||||
Sbjct: 2644 ctgagtccatcaatcccagcagcaactatagcagcaaggcccaagtgcgggtttgcgcac 2585

                                                                        
Query: 417  ccatcaaatgatttaatttcgaagttgctgaccatgtcgagaggcacaccaggtgggcat 476
             |||| || ||||||||||||||||||||||| |  || ||||| |  ||||||||||||
Sbjct: 2584 gcatcgaaggatttaatttcgaagttgctgacgagatcaagaggtatcccaggtgggcat 2525

                                  
Query: 477  gcggttctcaatggagcctccc 498
            || ||||||| |||||||||||
Sbjct: 2524 gcagttctcagtggagcctccc 2503



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>dbj|AK066867.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013075P13, full
            insert sequence
          Length = 2900

 Score =  252 bits (127), Expect = 1e-63
 Identities = 318/382 (83%), Gaps = 6/382 (1%)
 Strand = Plus / Minus

                                                                        
Query: 123  tagtaacggtgaatgagatcgccaaatgccccagggttcttcgagtaatgatcaatctcc 182
            ||||||||||||||||||||| | |||||  |||||||||||  ||| ||||| ||||| 
Sbjct: 2678 tagtaacggtgaatgagatcggcgaatgctgcagggttcttctcgtagtgatcgatctca 2619

                                                                        
Query: 183  gccttgcgtacagcgataacagctgtaataagcttattcccgattagctcatgcaaagtt 242
            ||||| |||||||| ||||| || || | ||| ||||  ||||| |  |||||||   ||
Sbjct: 2618 gcctttcgtacagcaataacggcagtgacaagtttatcgccgatcaattcatgcatgatt 2559

                                                                        
Query: 243  ttgtctgcagcaagtgattctacagattccagcaagtcctgcggtagccttttgagcttg 302
            ||||||||||| |||| ||| |||||||||| |||||||| ||| | |||||||||||||
Sbjct: 2558 ttgtctgcagctagtgcttcgacagattccatcaagtccttcggcatccttttgagcttg 2499

                                                                        
Query: 303  gta------gcataatctgcaggatttgattcaattggttcaggcaactcaaggccgttc 356
            |        |||||| ||||||| ||||||||| ||||||||||||||  |||||   ||
Sbjct: 2498 gagttggaggcataacctgcagggtttgattcagttggttcaggcaacgtaaggcttctc 2439

                                                                        
Query: 357  ctaagtccatcaatcccagcagcgacaatagcagcaagccccaagtgcggatttgcgcac 416
            || |||||||||||||||||||| || ||||||||||| ||||||||||| |||||||||
Sbjct: 2438 ctgagtccatcaatcccagcagcaactatagcagcaaggcccaagtgcgggtttgcgcac 2379

                                                                        
Query: 417  ccatcaaatgatttaatttcgaagttgctgaccatgtcgagaggcacaccaggtgggcat 476
             |||| || ||||||||||||||||||||||| |  || ||||| |  ||||||||||||
Sbjct: 2378 gcatcgaaggatttaatttcgaagttgctgacgagatcaagaggtatcccaggtgggcat 2319

                                  
Query: 477  gcggttctcaatggagcctccc 498
            || ||||||| |||||||||||
Sbjct: 2318 gcagttctcagtggagcctccc 2297



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>gb|AY835457.1| Saccharum officinarum glutamine synthetase (GSI) mRNA, partial cds
          Length = 2038

 Score =  226 bits (114), Expect = 6e-56
 Identities = 291/350 (83%)
 Strand = Plus / Minus

                                                                        
Query: 159  ttcttcgagtaatgatcaatctccgccttgcgtacagcgataacagctgtaataagctta 218
            ||||||||| ||||||| ||||| ||||| |||| ||| ||  ||||||| | ||| |||
Sbjct: 1737 ttcttcgagaaatgatcgatctcagccttccgtatagctatcgcagctgtgacaagttta 1678

                                                                        
Query: 219  ttcccgattagctcatgcaaagttttgtctgcagcaagtgattctacagattccagcaag 278
            |  || ||||  |||||||||   || ||||||| ||||| ||||||||||||| ||| |
Sbjct: 1677 tcaccaattaattcatgcaaaaccttatctgcagaaagtgcttctacagattcctgcagg 1618

                                                                        
Query: 279  tcctgcggtagccttttgagcttggtagcataatctgcaggatttgattcaattggttca 338
            | |||||||||||| || || |||| ||| | ||| | ||| ||||||||||||||||||
Sbjct: 1617 ttctgcggtagcctcttcagtttggaagcgtgatcagaagggtttgattcaattggttca 1558

                                                                        
Query: 339  ggcaactcaaggccgttcctaagtccatcaatcccagcagcgacaatagcagcaagcccc 398
            ||||||| |||| |  | || || ||||| || || ||||| || ||||||||||| |||
Sbjct: 1557 ggcaacttaaggtctcttcttagcccatcgatgccggcagcaacgatagcagcaagaccc 1498

                                                                        
Query: 399  aagtgcggatttgcgcacccatcaaatgatttaatttcgaagttgctgaccatgtcgaga 458
            ||||||||||||||||| ||||| || ||||| || |||||||||||||| |  || |||
Sbjct: 1497 aagtgcggatttgcgcagccatcgaaggatttgatctcgaagttgctgactaaatcaaga 1438

                                                              
Query: 459  ggcacaccaggtgggcatgcggttctcaatggagcctcccggttttcttt 508
            |||||||||||||||||||||||||| ||||||||||||| ||| |||||
Sbjct: 1437 ggcacaccaggtgggcatgcggttcttaatggagcctccctgttctcttt 1388



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>gb|AY109282.1| Zea mays PCO137630 mRNA sequence
          Length = 794

 Score =  190 bits (96), Expect = 3e-45
 Identities = 237/284 (83%)
 Strand = Plus / Minus

                                                                       
Query: 225 attagctcatgcaaagttttgtctgcagcaagtgattctacagattccagcaagtcctgc 284
           |||| ||||||||||   || ||||||| ||| ||||||||||||||| ||| || ||||
Sbjct: 447 attaactcatgcaaaaccttatctgcagaaagcgattctacagattcctgcaggttctgc 388

                                                                       
Query: 285 ggtagccttttgagcttggtagcataatctgcaggatttgattcaattggttcaggcaac 344
           ||||||||||| || || | ||  | ||| | ||| |||||||||||||| ||||| |||
Sbjct: 387 ggtagccttttcagttttgaagagtgatcagaagggtttgattcaattggctcaggtaac 328

                                                                       
Query: 345 tcaaggccgttcctaagtccatcaatcccagcagcgacaatagcagcaagccccaagtgc 404
           | ||||    | || || ||||| || |||||||| || ||||||||||| |||||||||
Sbjct: 327 ttaaggtgtcttcttagcccatcgatgccagcagctacgatagcagcaagacccaagtgc 268

                                                                       
Query: 405 ggatttgcgcacccatcaaatgatttaatttcgaagttgctgaccatgtcgagaggcaca 464
           ||||||||||| ||||| || ||||| || |||||||||||||| |  || |||||||||
Sbjct: 267 ggatttgcgcaaccatcgaaggatttgatctcgaagttgctgactaaatcaagaggcaca 208

                                                       
Query: 465 ccaggtgggcatgcggttctcaatggagcctcccggttttcttt 508
           |||||||||||||||||||| ||||||||||||| ||| |||||
Sbjct: 207 ccaggtgggcatgcggttcttaatggagcctccctgttctcttt 164



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>gb|AC025905.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone nbxb0018F16,
             complete sequence
          Length = 179157

 Score =  159 bits (80), Expect = 1e-35
 Identities = 146/168 (86%)
 Strand = Plus / Minus

                                                                         
Query: 331   ttggttcaggcaactcaaggccgttcctaagtccatcaatcccagcagcgacaatagcag 390
             ||||||||||||||  |||||   |||| |||||||||||||||||||| || |||||||
Sbjct: 57435 ttggttcaggcaacgtaaggcttctcctgagtccatcaatcccagcagcaactatagcag 57376

                                                                         
Query: 391   caagccccaagtgcggatttgcgcacccatcaaatgatttaatttcgaagttgctgacca 450
             |||| ||||||||||| ||||||||| |||| || ||||||||||||||||||||||| |
Sbjct: 57375 caaggcccaagtgcgggtttgcgcacgcatcgaaggatttaatttcgaagttgctgacga 57316

                                                             
Query: 451   tgtcgagaggcacaccaggtgggcatgcggttctcaatggagcctccc 498
               || ||||| |  |||||||||||||| ||||||| |||||||||||
Sbjct: 57315 gatcaagaggtatcccaggtgggcatgcagttctcagtggagcctccc 57268



 Score = 69.9 bits (35), Expect = 8e-09
 Identities = 56/63 (88%)
 Strand = Plus / Minus

                                                                         
Query: 241   ttttgtctgcagcaagtgattctacagattccagcaagtcctgcggtagccttttgagct 300
             ||||||||||||| |||| ||| |||||||||| |||||||| ||| | |||||||||||
Sbjct: 57765 ttttgtctgcagctagtgcttcgacagattccatcaagtccttcggcatccttttgagct 57706

                
Query: 301   tgg 303
             |||
Sbjct: 57705 tgg 57703



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 55/64 (85%)
 Strand = Plus / Minus

                                                                         
Query: 123   tagtaacggtgaatgagatcgccaaatgccccagggttcttcgagtaatgatcaatctcc 182
             ||||||||||||||||||||| | |||||  |||||||||||  ||| ||||| ||||| 
Sbjct: 57992 tagtaacggtgaatgagatcggcgaatgctgcagggttcttctcgtagtgatcgatctca 57933

                 
Query: 183   gcct 186
             ||||
Sbjct: 57932 gcct 57929



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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score =  159 bits (80), Expect = 1e-35
 Identities = 146/168 (86%)
 Strand = Plus / Minus

                                                                            
Query: 331      ttggttcaggcaactcaaggccgttcctaagtccatcaatcccagcagcgacaatagcag 390
                ||||||||||||||  |||||   |||| |||||||||||||||||||| || |||||||
Sbjct: 16178546 ttggttcaggcaacgtaaggcttctcctgagtccatcaatcccagcagcaactatagcag 16178487

                                                                            
Query: 391      caagccccaagtgcggatttgcgcacccatcaaatgatttaatttcgaagttgctgacca 450
                |||| ||||||||||| ||||||||| |||| || ||||||||||||||||||||||| |
Sbjct: 16178486 caaggcccaagtgcgggtttgcgcacgcatcgaaggatttaatttcgaagttgctgacga 16178427

                                                                
Query: 451      tgtcgagaggcacaccaggtgggcatgcggttctcaatggagcctccc 498
                  || ||||| |  |||||||||||||| ||||||| |||||||||||
Sbjct: 16178426 gatcaagaggtatcccaggtgggcatgcagttctcagtggagcctccc 16178379



 Score = 69.9 bits (35), Expect = 8e-09
 Identities = 56/63 (88%)
 Strand = Plus / Minus

                                                                            
Query: 241      ttttgtctgcagcaagtgattctacagattccagcaagtcctgcggtagccttttgagct 300
                ||||||||||||| |||| ||| |||||||||| |||||||| ||| | |||||||||||
Sbjct: 16178876 ttttgtctgcagctagtgcttcgacagattccatcaagtccttcggcatccttttgagct 16178817

                   
Query: 301      tgg 303
                |||
Sbjct: 16178816 tgg 16178814



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 55/64 (85%)
 Strand = Plus / Minus

                                                                            
Query: 123      tagtaacggtgaatgagatcgccaaatgccccagggttcttcgagtaatgatcaatctcc 182
                ||||||||||||||||||||| | |||||  |||||||||||  ||| ||||| ||||| 
Sbjct: 16179103 tagtaacggtgaatgagatcggcgaatgctgcagggttcttctcgtagtgatcgatctca 16179044

                    
Query: 183      gcct 186
                ||||
Sbjct: 16179043 gcct 16179040



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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score =  159 bits (80), Expect = 1e-35
 Identities = 146/168 (86%)
 Strand = Plus / Minus

                                                                            
Query: 331      ttggttcaggcaactcaaggccgttcctaagtccatcaatcccagcagcgacaatagcag 390
                ||||||||||||||  |||||   |||| |||||||||||||||||||| || |||||||
Sbjct: 16186787 ttggttcaggcaacgtaaggcttctcctgagtccatcaatcccagcagcaactatagcag 16186728

                                                                            
Query: 391      caagccccaagtgcggatttgcgcacccatcaaatgatttaatttcgaagttgctgacca 450
                |||| ||||||||||| ||||||||| |||| || ||||||||||||||||||||||| |
Sbjct: 16186727 caaggcccaagtgcgggtttgcgcacgcatcgaaggatttaatttcgaagttgctgacga 16186668

                                                                
Query: 451      tgtcgagaggcacaccaggtgggcatgcggttctcaatggagcctccc 498
                  || ||||| |  |||||||||||||| ||||||| |||||||||||
Sbjct: 16186667 gatcaagaggtatcccaggtgggcatgcagttctcagtggagcctccc 16186620



 Score = 69.9 bits (35), Expect = 8e-09
 Identities = 56/63 (88%)
 Strand = Plus / Minus

                                                                            
Query: 241      ttttgtctgcagcaagtgattctacagattccagcaagtcctgcggtagccttttgagct 300
                ||||||||||||| |||| ||| |||||||||| |||||||| ||| | |||||||||||
Sbjct: 16187117 ttttgtctgcagctagtgcttcgacagattccatcaagtccttcggcatccttttgagct 16187058

                   
Query: 301      tgg 303
                |||
Sbjct: 16187057 tgg 16187055



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 55/64 (85%)
 Strand = Plus / Minus

                                                                            
Query: 123      tagtaacggtgaatgagatcgccaaatgccccagggttcttcgagtaatgatcaatctcc 182
                ||||||||||||||||||||| | |||||  |||||||||||  ||| ||||| ||||| 
Sbjct: 16187344 tagtaacggtgaatgagatcggcgaatgctgcagggttcttctcgtagtgatcgatctca 16187285

                    
Query: 183      gcct 186
                ||||
Sbjct: 16187284 gcct 16187281



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>emb|AJ238212.1|MTR238212 Medicago truncatula mRNA for glutamine synthetase I
          Length = 1734

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                          
Query: 158  gttcttcgagtaatgatcaatctccgcctt 187
            ||||||||||||||||||||| || |||||
Sbjct: 1371 gttcttcgagtaatgatcaatttcagcctt 1342



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>gb|DQ059188.1| Neriacanthus purdieanus ribosomal protein S16 (rps16) gene, intron;
           chloroplast
          Length = 747

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 422 aaatgatttaatttcgaagtt 442
           |||||||||||||||||||||
Sbjct: 706 aaatgatttaatttcgaagtt 686



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>gb|AC074032.24| Homo sapiens 12 BAC RP4-605O3 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 40346

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 1     ctttattattaactgaaaaac 21
             |||||||||||||||||||||
Sbjct: 18152 ctttattattaactgaaaaac 18132



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>emb|BX000468.5| Zebrafish DNA sequence from clone DKEY-1J5 in linkage group 20,
             complete sequence
          Length = 208583

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 158   gttcttcgagtaatgatcaat 178
             |||||||||||||||||||||
Sbjct: 41288 gttcttcgagtaatgatcaat 41268



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>emb|CR956368.6| M.truncatula DNA sequence from clone MTH2-64D19 on chromosome 3, complete
              sequence
          Length = 139040

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 158    gttcttcgagtaatgatcaat 178
              |||||||||||||||||||||
Sbjct: 115886 gttcttcgagtaatgatcaat 115866



 Score = 40.1 bits (20), Expect = 6.9
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 158   gttcttcgagtaatgatcaatctccgccttgc 189
             |||||||||||| |||||||| || |||||||
Sbjct: 49453 gttcttcgagtattgatcaatttcagccttgc 49484



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>ref|NM_189656.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1800

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 309  taatctgcaggatttgattcaatt 332
            |||||||||||||||||| |||||
Sbjct: 1483 taatctgcaggatttgatgcaatt 1460



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>gb|BC077527.1| Xenopus laevis MGC83232 protein, mRNA (cDNA clone MGC:83232
            IMAGE:6635692), complete cds
          Length = 2151

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 292  ttttgagcttggtagcataa 311
            ||||||||||||||||||||
Sbjct: 1354 ttttgagcttggtagcataa 1373



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>gb|BC077521.1| Xenopus laevis MGC83098 protein, mRNA (cDNA clone MGC:83098
            IMAGE:6317431), complete cds
          Length = 2083

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 292  ttttgagcttggtagcataa 311
            ||||||||||||||||||||
Sbjct: 1295 ttttgagcttggtagcataa 1314



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>gb|BC042872.1| Homo sapiens transmembrane protein 26, mRNA (cDNA clone MGC:35010
            IMAGE:5164050), complete cds
          Length = 2581

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 293  tttgagcttggtagcataat 312
            ||||||||||||||||||||
Sbjct: 1541 tttgagcttggtagcataat 1522



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>ref|XM_590478.2| PREDICTED: Bos taurus similar to RIKEN cDNA 6430402H13 gene
           (LOC512879), mRNA
          Length = 1630

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 373 cagcagcgacaatagcagca 392
           ||||||||||||||||||||
Sbjct: 42  cagcagcgacaatagcagca 23



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>dbj|AK124367.1| Homo sapiens cDNA FLJ42376 fis, clone UTERU2035323
          Length = 2342

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 293 tttgagcttggtagcataat 312
           ||||||||||||||||||||
Sbjct: 169 tttgagcttggtagcataat 150



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>gb|AC068892.7| Homo sapiens chromosome 10 clone RP11-116D21, complete sequence
          Length = 161178

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 293   tttgagcttggtagcataat 312
             ||||||||||||||||||||
Sbjct: 24057 tttgagcttggtagcataat 24038



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>gb|AC080166.6| Homo sapiens BAC clone RP11-813C7 from 2, complete sequence
          Length = 179961

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 380    gacaatagcagcaagcccca 399
              ||||||||||||||||||||
Sbjct: 139154 gacaatagcagcaagcccca 139135



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>gb|AE000782.1| Archaeoglobus fulgidus DSM 4304, complete genome
          Length = 2178400

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 367    caatcccagcagcgacaatagcagcaag 394
              ||||| |||||||| |||||||||||||
Sbjct: 637612 caatcacagcagcggcaatagcagcaag 637639



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>emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB 122 of Yarrowia
              lipolytica
          Length = 4224103

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 373    cagcagcgacaatagcagca 392
              ||||||||||||||||||||
Sbjct: 745791 cagcagcgacaatagcagca 745810



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>emb|AL732317.13| Mouse DNA sequence from clone RP23-139F8 on chromosome 2, complete
             sequence
          Length = 222471

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 15    gaaaaacacgcaaattagtcatga 38
             |||||||||||||||||| |||||
Sbjct: 93874 gaaaaacacgcaaattagccatga 93851


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,092,738
Number of Sequences: 3902068
Number of extensions: 4092738
Number of successful extensions: 66126
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 66017
Number of HSP's gapped (non-prelim): 98
length of query: 510
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 488
effective length of database: 17,147,199,772
effective search space: 8367833488736
effective search space used: 8367833488736
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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