Clone Information

BLAST Search Result

Clone Name	rbasd2h12
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	gb\|BC029142.1\| Homo sapiens, clone IMAGE:5196881, mRNA	874	0.0
2	gb\|AF498268.1\| Haynaldia villosa clone kong28 mRNA	848	0.0
3	ref\|XM_507550.1\| PREDICTED Oryza sativa (japonica cultivar-group...	210	4e-51
4	ref\|XM_507549.1\| PREDICTED Oryza sativa (japonica cultivar-group...	210	4e-51
5	ref\|XM_507051.2\| PREDICTED Oryza sativa (japonica cultivar-group...	210	4e-51
6	ref\|XM_468415.1\| Oryza sativa (japonica cultivar-group), mRNA	210	4e-51
7	gb\|AY346465.1\| Oryza sativa (indica cultivar-group) putative bro...	210	4e-51
8	dbj\|AK104947.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	210	4e-51
9	dbj\|AK104525.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	210	4e-51
10	dbj\|AK104684.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	210	4e-51
11	dbj\|AK104103.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	210	4e-51
12	dbj\|AK071580.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	210	4e-51
13	dbj\|AK065134.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	210	4e-51
14	gb\|AY346466.1\| Oryza sativa (indica cultivar-group) brown planth...	196	6e-47
15	gb\|AY112171.1\| Zea mays CL11049_1 mRNA sequence	182	9e-43
16	dbj\|AP008208.1\| Oryza sativa (japonica cultivar-group) genomic D...	86	2e-13
17	dbj\|AP004048.3\| Oryza sativa (japonica cultivar-group) genomic D...	86	2e-13
18	dbj\|AP004028.3\| Oryza sativa (japonica cultivar-group) genomic D...	86	2e-13
19	dbj\|AK068163.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	86	2e-13
20	gb\|AC130222.4\| Mus musculus BAC clone RP23-18K19 from chromosome...	46	0.13
21	gb\|AC122227.4\| Mus musculus BAC clone RP23-131H10 from chromosom...	46	0.13
22	gb\|AC037492.5\|AC037492 Homo sapiens chromosome 8, clone RP11-38H...	44	0.52
23	gb\|CP000151.1\| Burkholderia sp. 383 chromosome 1, complete sequence	40	8.2
24	gb\|CP000125.1\| Burkholderia pseudomallei 1710b chromosome II, co...	40	8.2
25	gb\|AC122541.3\| Mus musculus BAC clone RP24-567D4 from chromosome...	40	8.2
26	gb\|AC138679.10\| Mus musculus chromosome 5, clone RP23-177I4, com...	40	8.2
27	ref\|XM_841417.1\| Trypanosoma brucei TREU927 hypothetical protein...	40	8.2
28	emb\|AL591793.1\|SME591793 Sinorhizobium meliloti 1021 complete ch...	40	8.2
29	gb\|AC018738.4\| Homo sapiens BAC clone RP11-419H23 from 2, comple...	40	8.2
30	ref\|XM_815829.1\| Trypanosoma cruzi strain CL Brener hypothetical...	40	8.2
31	gb\|CP000316.1\| Polaromonas sp. JS666, complete genome	40	8.2
32	emb\|BX571966.1\| Burkholderia pseudomallei strain K96243, chromos...	40	8.2
33	gb\|AC073576.23\| Homo sapiens 12 BAC RP11-363M20 (Roswell Park Ca...	40	8.2
34	ref\|XM_696639.1\| PREDICTED: Danio rerio hypothetical protein LOC...	40	8.2
35	gb\|CP000249.1\| Frankia sp. CcI3, complete genome	40	8.2
36	gb\|AF131950.1\| Human papillomavirus candHPV85, complete genome	40	8.2
37	gb\|CP000250.1\| Rhodopseudomonas palustris HaA2, complete genome	40	8.2
38	ref\|NM_001014321.1\| Danio rerio zgc:113340 (zgc:113340), mRNA	40	8.2
39	gb\|AC008750.9\| Homo sapiens chromosome 19 clone CTD-2616J11, com...	40	8.2
40	gb\|AE004451.1\| Pseudomonas aeruginosa PAO1, section 12 of 529 of...	40	8.2
41	gb\|BC091808.1\| Danio rerio zgc:113340, mRNA (cDNA clone MGC:1133...	40	8.2
42	emb\|AL355916.2\|CNS05TD1 Human chromosome 14 DNA sequence BAC R-4...	40	8.2
43	dbj\|AP002347.3\| Homo sapiens genomic DNA, chromosome 11q, clone:...	40	8.2
44	dbj\|AP000790.4\| Homo sapiens genomic DNA, chromosome 11q, clone:...	40	8.2
45	gb\|AC131803.3\| Mus musculus BAC clone RP24-549I15 from chromosom...	40	8.2

>gb|BC029142.1| Homo sapiens, clone IMAGE:5196881, mRNA
          Length = 1061

 Score =  874 bits (441), Expect = 0.0
 Identities = 538/565 (95%), Gaps = 4/565 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   tggcgtgcttctttacaaggaaaagctctcctaaatgctcccaggcatattttt-gcgat 59
           |||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||
Sbjct: 864 tggcgtgcttctttacaaggaaaagctctcctaaatgctcccaggcttattttttgcgat 805

                                                                       
Query: 60  acaggctacaaacacttttacat-ctataggatctgcctgctactcaaaagtaccgcgga 118
           |||| || ||||||||||||||  ||||||||||||||||||||||||| ||||||||||
Sbjct: 804 acagactgcaaacacttttacagactataggatctgcctgctactcaaa-gtaccgcgga 746

                                                                       
Query: 119 cacacatatttacagatccacaagtaccgggcatgggctcctgcgcctctaaaacttcag 178
           |||||||||||||||||||||||||||||||||||| |||||||  ||||||||||||||
Sbjct: 745 cacacatatttacagatccacaagtaccgggcatggactcctgcatctctaaaacttcag 686

                                                                       
Query: 179 catggcctccaacgcgcgaagaacgtcatcgcgggtaactatacctattacttgattgtc 238
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 catggcctccaacgcgcgaagaacgtcatcgcgggtaactatacctattacttgattgtc 626

                                                                       
Query: 239 ctggtttactatcggtaatctgtggatcttcttcttgagcatcagagctgcggcatcggt 298
           |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 625 ctggtttactatcggtaatctgtggatcttcttcctgagcatcagagctgcggcatcggt 566

                                                                       
Query: 299 cactgttttatcgcatgatagcgtgattgctggagatgtcatcacatctgcaatcttcgt 358
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 cactgttttatcgcatgatagcgtgattgctggagatgtcatcacatctgcaatcttcgt 506

                                                                       
Query: 359 ccttgacccatgtgaagccctcgcgcgatcgctcttgacgacgaccccgacacatcggcg 418
           | ||| |||||||||||||||| || ||||||||||||||||||||||||||||||||||
Sbjct: 505 ctttggcccatgtgaagccctcacgtgatcgctcttgacgacgaccccgacacatcggcg 446

                                                                       
Query: 419 ggcgctgtcgacaaccgggaggcctgacacgagctggaagtgtccttcaacctccaccag 478
           ||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 445 ggcactgtcgacaaccgggaggcctgacacgagctggaagtggccttcaacctccaccag 386

                                                                       
Query: 479 tgcctggtcccgctgtggccatcagcacgggcgtcgacatggcctcgcgcaggagcgccc 538
            ||||| | |||||||| |||||||||||||||||||||||||||| |||||||| | ||
Sbjct: 385 cgcctgct-ccgctgtgaccatcagcacgggcgtcgacatggcctcacgcaggagaggcc 327

                                    
Query: 539 ctcggtgctgatcgccggcgtggga 563
           | || |||||||||||||| |||||
Sbjct: 326 cccgctgctgatcgccggcatggga 302

to top

>gb|AF498268.1| Haynaldia villosa clone kong28 mRNA
          Length = 1474

 Score =  848 bits (428), Expect = 0.0
 Identities = 534/564 (94%), Gaps = 4/564 (0%)
 Strand = Plus / Plus

                                                                       
Query: 2   ggcgtgcttctttacaaggaaaagctctcctaaatgctcccaggcatatttttgcgatac 61
           |||||||||||||||||||||||||||||||||| | |||||||| ||||||||||||||
Sbjct: 47  ggcgtgcttctttacaaggaaaagctctcctaaaagttcccaggcttatttttgcgatac 106

                                                                       
Query: 62  aggctacaaacacttttacat-ctataggatctgcctgctactcaaaagtaccgcggaca 120
           ||||||||| ||||||||||  |||||| |||||||||||||||||||| ||||||||||
Sbjct: 107 aggctacaa-cacttttacagactatag-atctgcctgctactcaaaagcaccgcggaca 164

                                                                       
Query: 121 cacatatttacagatccacaagtaccgggcatgggctcctgcgcctctaaaacttcagca 180
           |||||||||||||||||||||||||||||||||| |||||||  ||||||||||||||||
Sbjct: 165 cacatatttacagatccacaagtaccgggcatggactcctgcatctctaaaacttcagca 224

                                                                       
Query: 181 tggcctccaacgcgcgaagaacgtcatcgcgggtaactatacctattacttgattgtcct 240
           ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 225 tggcctccaacgcgcgaagaacgtcgtcgcgggtaactatacctattacttgattgtcct 284

                                                                       
Query: 241 ggtttactatcggtaatctgtggatcttcttcttgagcatcagagctgcggcatcggtca 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 285 ggtttactatcggtaatctgtggatcttcttcttgagcatcagagctgcggcatcggtca 344

                                                                       
Query: 301 ctgttttatcgcatgatagcgtgattgctggagatgtcatcacatctgcaatcttcgtcc 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 345 ctgttttatcgcatgatagcgtgattgctggagatgtcatcacatctgcaatcttcgtct 404

                                                                       
Query: 361 ttgacccatgtgaagccctcgcgcgatcgctcttgacgacgaccccgacacatcggcggg 420
           ||| |||||||||||||||||||| ||||||||| |||||||||||||| |||| ||| |
Sbjct: 405 ttggcccatgtgaagccctcgcgcaatcgctcttcacgacgaccccgacgcatctgcgag 464

                                                                       
Query: 421 cgctgtcgacaaccgggaggcctgacacgagctggaagtgtccttcaacctccaccagtg 480
           |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||| |
Sbjct: 465 cgctgtcgacaaccgggaggcctgacacgagctgaaagtggccttcaacctccaccagcg 524

                                                                       
Query: 481 cctggtcccgctgtggccatcagcacgggcgtcgacatggcctcgcgcaggagcgcccct 540
           |||| | |||||||| ||||||||||||||||||||||||||||||||||||||| ||| 
Sbjct: 525 cctgct-ccgctgtgaccatcagcacgggcgtcgacatggcctcgcgcaggagcggcccc 583

                                   
Query: 541 cggtgctgatcgccggcgtgggaa 564
           || ||||||||| | |||||||||
Sbjct: 584 cgctgctgatcggcagcgtgggaa 607

to top

>ref|XM_507550.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1136_C12.20-2
           mRNA
          Length = 916

 Score =  210 bits (106), Expect = 4e-51
 Identities = 202/234 (86%)
 Strand = Plus / Minus

                                                                       
Query: 166 tctaaaacttcagcatggcctccaacgcgcgaagaacgtcatcgcgggtaactataccta 225
           |||||| || ||||| ||| |||||| |||||||||||||| | ||||||||||||||||
Sbjct: 690 tctaaacctccagcagggcttccaactcgcgaagaacgtcagcacgggtaactataccta 631

                                                                       
Query: 226 ttacttgattgtcctggtttactatcggtaatctgtggatcttcttcttgagcatcagag 285
           | |||||  ||||||| ||||| || ||||||||||||||||||||||| ||||||||||
Sbjct: 630 tcacttgtctgtcctgatttacaattggtaatctgtggatcttcttctttagcatcagag 571

                                                                       
Query: 286 ctgcggcatcggtcactgttttatcgcatgatagcgtgattgctggagatgtcatcacat 345
           |||| |||||  | |||||||| ||  ||| ||| ||||| |||||||| |||||||| |
Sbjct: 570 ctgccgcatccattactgttttgtcagatggtagagtgatggctggagaggtcatcactt 511

                                                                 
Query: 346 ctgcaatcttcgtccttgacccatgtgaagccctcgcgcgatcgctcttgacga 399
           |||||||||||||| |||||||||| |||||||| || || || ||||||||||
Sbjct: 510 ctgcaatcttcgtctttgacccatgagaagccctggcccggtcactcttgacga 457

to top

>ref|XM_507549.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1136_C12.20-2
           mRNA
          Length = 1002

 Score =  210 bits (106), Expect = 4e-51
 Identities = 202/234 (86%)
 Strand = Plus / Minus

                                                                       
Query: 166 tctaaaacttcagcatggcctccaacgcgcgaagaacgtcatcgcgggtaactataccta 225
           |||||| || ||||| ||| |||||| |||||||||||||| | ||||||||||||||||
Sbjct: 690 tctaaacctccagcagggcttccaactcgcgaagaacgtcagcacgggtaactataccta 631

                                                                       
Query: 226 ttacttgattgtcctggtttactatcggtaatctgtggatcttcttcttgagcatcagag 285
           | |||||  ||||||| ||||| || ||||||||||||||||||||||| ||||||||||
Sbjct: 630 tcacttgtctgtcctgatttacaattggtaatctgtggatcttcttctttagcatcagag 571

                                                                       
Query: 286 ctgcggcatcggtcactgttttatcgcatgatagcgtgattgctggagatgtcatcacat 345
           |||| |||||  | |||||||| ||  ||| ||| ||||| |||||||| |||||||| |
Sbjct: 570 ctgccgcatccattactgttttgtcagatggtagagtgatggctggagaggtcatcactt 511

                                                                 
Query: 346 ctgcaatcttcgtccttgacccatgtgaagccctcgcgcgatcgctcttgacga 399
           |||||||||||||| |||||||||| |||||||| || || || ||||||||||
Sbjct: 510 ctgcaatcttcgtctttgacccatgagaagccctggcccggtcactcttgacga 457

to top

>ref|XM_507051.2| PREDICTED Oryza sativa (japonica cultivar-group), OJ1136_C12.20-2
           mRNA
          Length = 956

 Score =  210 bits (106), Expect = 4e-51
 Identities = 202/234 (86%)
 Strand = Plus / Minus

                                                                       
Query: 166 tctaaaacttcagcatggcctccaacgcgcgaagaacgtcatcgcgggtaactataccta 225
           |||||| || ||||| ||| |||||| |||||||||||||| | ||||||||||||||||
Sbjct: 696 tctaaacctccagcagggcttccaactcgcgaagaacgtcagcacgggtaactataccta 637

                                                                       
Query: 226 ttacttgattgtcctggtttactatcggtaatctgtggatcttcttcttgagcatcagag 285
           | |||||  ||||||| ||||| || ||||||||||||||||||||||| ||||||||||
Sbjct: 636 tcacttgtctgtcctgatttacaattggtaatctgtggatcttcttctttagcatcagag 577

                                                                       
Query: 286 ctgcggcatcggtcactgttttatcgcatgatagcgtgattgctggagatgtcatcacat 345
           |||| |||||  | |||||||| ||  ||| ||| ||||| |||||||| |||||||| |
Sbjct: 576 ctgccgcatccattactgttttgtcagatggtagagtgatggctggagaggtcatcactt 517

                                                                 
Query: 346 ctgcaatcttcgtccttgacccatgtgaagccctcgcgcgatcgctcttgacga 399
           |||||||||||||| |||||||||| |||||||| || || || ||||||||||
Sbjct: 516 ctgcaatcttcgtctttgacccatgagaagccctggcccggtcactcttgacga 463

to top

>ref|XM_468415.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 833

 Score =  210 bits (106), Expect = 4e-51
 Identities = 202/234 (86%)
 Strand = Plus / Minus

                                                                       
Query: 166 tctaaaacttcagcatggcctccaacgcgcgaagaacgtcatcgcgggtaactataccta 225
           |||||| || ||||| ||| |||||| |||||||||||||| | ||||||||||||||||
Sbjct: 682 tctaaacctccagcagggcttccaactcgcgaagaacgtcagcacgggtaactataccta 623

                                                                       
Query: 226 ttacttgattgtcctggtttactatcggtaatctgtggatcttcttcttgagcatcagag 285
           | |||||  ||||||| ||||| || ||||||||||||||||||||||| ||||||||||
Sbjct: 622 tcacttgtctgtcctgatttacaattggtaatctgtggatcttcttctttagcatcagag 563

                                                                       
Query: 286 ctgcggcatcggtcactgttttatcgcatgatagcgtgattgctggagatgtcatcacat 345
           |||| |||||  | |||||||| ||  ||| ||| ||||| |||||||| |||||||| |
Sbjct: 562 ctgccgcatccattactgttttgtcagatggtagagtgatggctggagaggtcatcactt 503

                                                                 
Query: 346 ctgcaatcttcgtccttgacccatgtgaagccctcgcgcgatcgctcttgacga 399
           |||||||||||||| |||||||||| |||||||| || || || ||||||||||
Sbjct: 502 ctgcaatcttcgtctttgacccatgagaagccctggcccggtcactcttgacga 449

to top

>gb|AY346465.1| Oryza sativa (indica cultivar-group) putative brown planthopper
            susceptibility protein Hd002A mRNA, complete cds
          Length = 1265

 Score =  210 bits (106), Expect = 4e-51
 Identities = 202/234 (86%)
 Strand = Plus / Minus

                                                                        
Query: 166  tctaaaacttcagcatggcctccaacgcgcgaagaacgtcatcgcgggtaactataccta 225
            |||||| || ||||| ||| |||||| |||||||||||||| | ||||||||||||||||
Sbjct: 1114 tctaaacctccagcagggcttccaactcgcgaagaacgtcagcacgggtaactataccta 1055

                                                                        
Query: 226  ttacttgattgtcctggtttactatcggtaatctgtggatcttcttcttgagcatcagag 285
            | |||||  ||||||| ||||| || ||||||||||||||||||||||| ||||||||||
Sbjct: 1054 tcacttgtctgtcctgatttacaattggtaatctgtggatcttcttctttagcatcagag 995

                                                                        
Query: 286  ctgcggcatcggtcactgttttatcgcatgatagcgtgattgctggagatgtcatcacat 345
            |||| |||||  | |||||||| ||  ||| ||| ||||| |||||||| |||||||| |
Sbjct: 994  ctgccgcatccattactgttttgtcagatggtagagtgatggctggagaggtcatcactt 935

                                                                  
Query: 346  ctgcaatcttcgtccttgacccatgtgaagccctcgcgcgatcgctcttgacga 399
            |||||||||||||| |||||||||| |||||||| || || || ||||||||||
Sbjct: 934  ctgcaatcttcgtctttgacccatgagaagccctggcccggtcactcttgacga 881

to top

>dbj|AK104947.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-108-G08, full
           insert sequence
          Length = 833

 Score =  210 bits (106), Expect = 4e-51
 Identities = 202/234 (86%)
 Strand = Plus / Minus

                                                                       
Query: 166 tctaaaacttcagcatggcctccaacgcgcgaagaacgtcatcgcgggtaactataccta 225
           |||||| || ||||| ||| |||||| |||||||||||||| | ||||||||||||||||
Sbjct: 682 tctaaacctccagcagggcttccaactcgcgaagaacgtcagcacgggtaactataccta 623

                                                                       
Query: 226 ttacttgattgtcctggtttactatcggtaatctgtggatcttcttcttgagcatcagag 285
           | |||||  ||||||| ||||| || ||||||||||||||||||||||| ||||||||||
Sbjct: 622 tcacttgtctgtcctgatttacaattggtaatctgtggatcttcttctttagcatcagag 563

                                                                       
Query: 286 ctgcggcatcggtcactgttttatcgcatgatagcgtgattgctggagatgtcatcacat 345
           |||| |||||  | |||||||| ||  ||| ||| ||||| |||||||| |||||||| |
Sbjct: 562 ctgccgcatccattactgttttgtcagatggtagagtgatggctggagaggtcatcactt 503

                                                                 
Query: 346 ctgcaatcttcgtccttgacccatgtgaagccctcgcgcgatcgctcttgacga 399
           |||||||||||||| |||||||||| |||||||| || || || ||||||||||
Sbjct: 502 ctgcaatcttcgtctttgacccatgagaagccctggcccggtcactcttgacga 449

to top

>dbj|AK104525.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-303-H03, full
           insert sequence
          Length = 994

 Score =  210 bits (106), Expect = 4e-51
 Identities = 202/234 (86%)
 Strand = Plus / Minus

                                                                       
Query: 166 tctaaaacttcagcatggcctccaacgcgcgaagaacgtcatcgcgggtaactataccta 225
           |||||| || ||||| ||| |||||| |||||||||||||| | ||||||||||||||||
Sbjct: 682 tctaaacctccagcagggcttccaactcgcgaagaacgtcagcacgggtaactataccta 623

                                                                       
Query: 226 ttacttgattgtcctggtttactatcggtaatctgtggatcttcttcttgagcatcagag 285
           | |||||  ||||||| ||||| || ||||||||||||||||||||||| ||||||||||
Sbjct: 622 tcacttgtctgtcctgatttacaattggtaatctgtggatcttcttctttagcatcagag 563

                                                                       
Query: 286 ctgcggcatcggtcactgttttatcgcatgatagcgtgattgctggagatgtcatcacat 345
           |||| |||||  | |||||||| ||  ||| ||| ||||| |||||||| |||||||| |
Sbjct: 562 ctgccgcatccattactgttttgtcagatggtagagtgatggctggagaggtcatcactt 503

                                                                 
Query: 346 ctgcaatcttcgtccttgacccatgtgaagccctcgcgcgatcgctcttgacga 399
           |||||||||||||| |||||||||| |||||||| || || || ||||||||||
Sbjct: 502 ctgcaatcttcgtctttgacccatgagaagccctggcccggtcactcttgacga 449

to top

>dbj|AK104684.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-036-B10, full
           insert sequence
          Length = 916

 Score =  210 bits (106), Expect = 4e-51
 Identities = 202/234 (86%)
 Strand = Plus / Minus

                                                                       
Query: 166 tctaaaacttcagcatggcctccaacgcgcgaagaacgtcatcgcgggtaactataccta 225
           |||||| || ||||| ||| |||||| |||||||||||||| | ||||||||||||||||
Sbjct: 690 tctaaacctccagcagggcttccaactcgcgaagaacgtcagcacgggtaactataccta 631

                                                                       
Query: 226 ttacttgattgtcctggtttactatcggtaatctgtggatcttcttcttgagcatcagag 285
           | |||||  ||||||| ||||| || ||||||||||||||||||||||| ||||||||||
Sbjct: 630 tcacttgtctgtcctgatttacaattggtaatctgtggatcttcttctttagcatcagag 571

                                                                       
Query: 286 ctgcggcatcggtcactgttttatcgcatgatagcgtgattgctggagatgtcatcacat 345
           |||| |||||  | |||||||| ||  ||| ||| ||||| |||||||| |||||||| |
Sbjct: 570 ctgccgcatccattactgttttgtcagatggtagagtgatggctggagaggtcatcactt 511

                                                                 
Query: 346 ctgcaatcttcgtccttgacccatgtgaagccctcgcgcgatcgctcttgacga 399
           |||||||||||||| |||||||||| |||||||| || || || ||||||||||
Sbjct: 510 ctgcaatcttcgtctttgacccatgagaagccctggcccggtcactcttgacga 457

to top

>dbj|AK104103.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-202-B08, full
           insert sequence
          Length = 1002

 Score =  210 bits (106), Expect = 4e-51
 Identities = 202/234 (86%)
 Strand = Plus / Minus

                                                                       
Query: 166 tctaaaacttcagcatggcctccaacgcgcgaagaacgtcatcgcgggtaactataccta 225
           |||||| || ||||| ||| |||||| |||||||||||||| | ||||||||||||||||
Sbjct: 690 tctaaacctccagcagggcttccaactcgcgaagaacgtcagcacgggtaactataccta 631

                                                                       
Query: 226 ttacttgattgtcctggtttactatcggtaatctgtggatcttcttcttgagcatcagag 285
           | |||||  ||||||| ||||| || ||||||||||||||||||||||| ||||||||||
Sbjct: 630 tcacttgtctgtcctgatttacaattggtaatctgtggatcttcttctttagcatcagag 571

                                                                       
Query: 286 ctgcggcatcggtcactgttttatcgcatgatagcgtgattgctggagatgtcatcacat 345
           |||| |||||  | |||||||| ||  ||| ||| ||||| |||||||| |||||||| |
Sbjct: 570 ctgccgcatccattactgttttgtcagatggtagagtgatggctggagaggtcatcactt 511

                                                                 
Query: 346 ctgcaatcttcgtccttgacccatgtgaagccctcgcgcgatcgctcttgacga 399
           |||||||||||||| |||||||||| |||||||| || || || ||||||||||
Sbjct: 510 ctgcaatcttcgtctttgacccatgagaagccctggcccggtcactcttgacga 457

to top

>dbj|AK071580.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023106O04, full
           insert sequence
          Length = 1514

 Score =  210 bits (106), Expect = 4e-51
 Identities = 202/234 (86%)
 Strand = Plus / Minus

                                                                       
Query: 166 tctaaaacttcagcatggcctccaacgcgcgaagaacgtcatcgcgggtaactataccta 225
           |||||| || ||||| ||| |||||| |||||||||||||| | ||||||||||||||||
Sbjct: 683 tctaaacctccagcagggcttccaactcgcgaagaacgtcagcacgggtaactataccta 624

                                                                       
Query: 226 ttacttgattgtcctggtttactatcggtaatctgtggatcttcttcttgagcatcagag 285
           | |||||  ||||||| ||||| || ||||||||||||||||||||||| ||||||||||
Sbjct: 623 tcacttgtctgtcctgatttacaattggtaatctgtggatcttcttctttagcatcagag 564

                                                                       
Query: 286 ctgcggcatcggtcactgttttatcgcatgatagcgtgattgctggagatgtcatcacat 345
           |||| |||||  | |||||||| ||  ||| ||| ||||| |||||||| |||||||| |
Sbjct: 563 ctgccgcatccattactgttttgtcagatggtagagtgatggctggagaggtcatcactt 504

                                                                 
Query: 346 ctgcaatcttcgtccttgacccatgtgaagccctcgcgcgatcgctcttgacga 399
           |||||||||||||| |||||||||| |||||||| || || || ||||||||||
Sbjct: 503 ctgcaatcttcgtctttgacccatgagaagccctggcccggtcactcttgacga 450

to top

>dbj|AK065134.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001P24, full
           insert sequence
          Length = 955

 Score =  210 bits (106), Expect = 4e-51
 Identities = 202/234 (86%)
 Strand = Plus / Minus

                                                                       
Query: 166 tctaaaacttcagcatggcctccaacgcgcgaagaacgtcatcgcgggtaactataccta 225
           |||||| || ||||| ||| |||||| |||||||||||||| | ||||||||||||||||
Sbjct: 695 tctaaacctccagcagggcttccaactcgcgaagaacgtcagcacgggtaactataccta 636

                                                                       
Query: 226 ttacttgattgtcctggtttactatcggtaatctgtggatcttcttcttgagcatcagag 285
           | |||||  ||||||| ||||| || ||||||||||||||||||||||| ||||||||||
Sbjct: 635 tcacttgtctgtcctgatttacaattggtaatctgtggatcttcttctttagcatcagag 576

                                                                       
Query: 286 ctgcggcatcggtcactgttttatcgcatgatagcgtgattgctggagatgtcatcacat 345
           |||| |||||  | |||||||| ||  ||| ||| ||||| |||||||| |||||||| |
Sbjct: 575 ctgccgcatccattactgttttgtcagatggtagagtgatggctggagaggtcatcactt 516

                                                                 
Query: 346 ctgcaatcttcgtccttgacccatgtgaagccctcgcgcgatcgctcttgacga 399
           |||||||||||||| |||||||||| |||||||| || || || ||||||||||
Sbjct: 515 ctgcaatcttcgtctttgacccatgagaagccctggcccggtcactcttgacga 462

to top

>gb|AY346466.1| Oryza sativa (indica cultivar-group) brown planthopper-induced
           resistance protein 1 (Bi1) mRNA, complete cds
          Length = 1098

 Score =  196 bits (99), Expect = 6e-47
 Identities = 202/235 (85%), Gaps = 1/235 (0%)
 Strand = Plus / Minus

                                                                       
Query: 166 tctaaaacttcagcatggcctccaacgcgcgaagaacgtcatcgcgggtaactataccta 225
           |||||| || ||||| ||| |||||| |||||||||||||| | ||||||||||||||||
Sbjct: 949 tctaaacctccagcagggcttccaactcgcgaagaacgtcagcacgggtaactataccta 890

                                                                       
Query: 226 ttacttgattgtcctggtttactatcggtaatctgtggatc-ttcttcttgagcatcaga 284
           | |||||  ||||||| ||||| || ||||||||||||||| |||||||| |||||||||
Sbjct: 889 tcacttgtctgtcctgatttacaattggtaatctgtggatccttcttctttagcatcaga 830

                                                                       
Query: 285 gctgcggcatcggtcactgttttatcgcatgatagcgtgattgctggagatgtcatcaca 344
           ||||| |||||  | |||||||| ||  ||| ||| ||||| |||||||| |||||||| 
Sbjct: 829 gctgccgcatccattactgttttgtcagatggtagagtgatggctggagaggtcatcact 770

                                                                  
Query: 345 tctgcaatcttcgtccttgacccatgtgaagccctcgcgcgatcgctcttgacga 399
           ||||||||||||||| |||||||||| |||||||| || || || ||||||||||
Sbjct: 769 tctgcaatcttcgtctttgacccatgagaagccctggcccggtcactcttgacga 715

to top

>gb|AY112171.1| Zea mays CL11049_1 mRNA sequence
          Length = 803

 Score =  182 bits (92), Expect = 9e-43
 Identities = 301/371 (81%), Gaps = 1/371 (0%)
 Strand = Plus / Minus

                                                                       
Query: 167 ctaaaacttcagcatggcctccaacgcgcgaagaacgtcatcgcgggtaactatacctat 226
           ||||| ||||| |||| | |||||| |||||||||| ||| |||||||||||||||||||
Sbjct: 594 ctaaatcttcaacatgccttccaacacgcgaagaacatcagcgcgggtaactatacctat 535

                                                                       
Query: 227 tacttgattgtcctggtttactatcggtaatctgtggatcttcttcttgagcatcagagc 286
           |||      |||||||||||| |  ||||||||||||||||||||||||||||| ||| |
Sbjct: 534 tacnnnnncgtcctggtttacaactggtaatctgtggatcttcttcttgagcatgagaac 475

                                                                       
Query: 287 tgcggcatcggtcactgttttatcgcatgatagcgtgattgctggagatgtcatcacatc 346
            || |||||  |||| ||||| ||  | ||||| ||||| ||||||||||||||||| ||
Sbjct: 474 agcagcatccatcacggttttgtcagacgatagtgtgatagctggagatgtcatcacttc 415

                                                                       
Query: 347 tgcaatcttcgtccttgacccatgtgaagccctcgcgcgatcgctcttgacgacgacccc 406
            |  ||||||||| | |||||||| || || || || || ||| |||||||||  |||||
Sbjct: 414 cgatatcttcgtcttggacccatgagaggctcttgcccggtcgttcttgacgatcacccc 355

                                                                       
Query: 407 gacacatcggcgggcgctgtcgacaaccgggaggcctgacacgagctggaagtgtccttc 466
           ||| |||| | || |||||||||| ||||| || || ||||||  || |||||| |  ||
Sbjct: 354 gacgcatctgaggccgctgtcgacgaccggaagccccgacacggcctcgaagtggcactc 295

                                                                       
Query: 467 aacctccaccagtgcctggtcccgctgtggccatcagcacgggcgtcgacatggcctcgc 526
            || ||| |||| | ||||| | |||||||||| ||||||||| || ||||||| |||||
Sbjct: 294 gacgtcctccagggtctggt-ctgctgtggccaccagcacgggtgtggacatggtctcgc 236

                      
Query: 527 gcaggagcgcc 537
            ||||||||||
Sbjct: 235 tcaggagcgcc 225

to top

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 67/75 (89%)
 Strand = Plus / Minus

                                                                            
Query: 221      acctattacttgattgtcctggtttactatcggtaatctgtggatcttcttcttgagcat 280
                |||||| |||||  ||||||| ||||| || ||||||||||||||||||||||| |||||
Sbjct: 35111790 acctatcacttgtctgtcctgatttacaattggtaatctgtggatcttcttctttagcat 35111731

                               
Query: 281      cagagctgcggcatc 295
                ||||||||| |||||
Sbjct: 35111730 cagagctgccgcatc 35111716



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 52/59 (88%)
 Strand = Plus / Minus

                                                                           
Query: 166      tctaaaacttcagcatggcctccaacgcgcgaagaacgtcatcgcgggtaactatacct 224
                |||||| || ||||| ||| |||||| |||||||||||||| | |||||||||||||||
Sbjct: 35111977 tctaaacctccagcagggcttccaactcgcgaagaacgtcagcacgggtaactatacct 35111919



 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 57/66 (86%)
 Strand = Plus / Minus

                                                                            
Query: 300      actgttttatcgcatgatagcgtgattgctggagatgtcatcacatctgcaatcttcgtc 359
                |||||||| ||  ||| ||| ||||| |||||||| |||||||| |||||||||||||||
Sbjct: 35111621 actgttttgtcagatggtagagtgatggctggagaggtcatcacttctgcaatcttcgtc 35111562

                      
Query: 360      cttgac 365
                 |||||
Sbjct: 35111561 tttgac 35111556

to top

>dbj|AP004048.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
            clone:OJ1202_E07
          Length = 145014

 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 67/75 (89%)
 Strand = Plus / Minus

                                                                        
Query: 221  acctattacttgattgtcctggtttactatcggtaatctgtggatcttcttcttgagcat 280
            |||||| |||||  ||||||| ||||| || ||||||||||||||||||||||| |||||
Sbjct: 7146 acctatcacttgtctgtcctgatttacaattggtaatctgtggatcttcttctttagcat 7087

                           
Query: 281  cagagctgcggcatc 295
            ||||||||| |||||
Sbjct: 7086 cagagctgccgcatc 7072



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 52/59 (88%)
 Strand = Plus / Minus

                                                                       
Query: 166  tctaaaacttcagcatggcctccaacgcgcgaagaacgtcatcgcgggtaactatacct 224
            |||||| || ||||| ||| |||||| |||||||||||||| | |||||||||||||||
Sbjct: 7333 tctaaacctccagcagggcttccaactcgcgaagaacgtcagcacgggtaactatacct 7275



 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 57/66 (86%)
 Strand = Plus / Minus

                                                                        
Query: 300  actgttttatcgcatgatagcgtgattgctggagatgtcatcacatctgcaatcttcgtc 359
            |||||||| ||  ||| ||| ||||| |||||||| |||||||| |||||||||||||||
Sbjct: 6977 actgttttgtcagatggtagagtgatggctggagaggtcatcacttctgcaatcttcgtc 6918

                  
Query: 360  cttgac 365
             |||||
Sbjct: 6917 tttgac 6912

to top

>dbj|AP004028.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1136_C12
          Length = 103973

 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 67/75 (89%)
 Strand = Plus / Minus

                                                                         
Query: 221   acctattacttgattgtcctggtttactatcggtaatctgtggatcttcttcttgagcat 280
             |||||| |||||  ||||||| ||||| || ||||||||||||||||||||||| |||||
Sbjct: 84953 acctatcacttgtctgtcctgatttacaattggtaatctgtggatcttcttctttagcat 84894

                            
Query: 281   cagagctgcggcatc 295
             ||||||||| |||||
Sbjct: 84893 cagagctgccgcatc 84879



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 52/59 (88%)
 Strand = Plus / Minus

                                                                        
Query: 166   tctaaaacttcagcatggcctccaacgcgcgaagaacgtcatcgcgggtaactatacct 224
             |||||| || ||||| ||| |||||| |||||||||||||| | |||||||||||||||
Sbjct: 85140 tctaaacctccagcagggcttccaactcgcgaagaacgtcagcacgggtaactatacct 85082



 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 57/66 (86%)
 Strand = Plus / Minus

                                                                         
Query: 300   actgttttatcgcatgatagcgtgattgctggagatgtcatcacatctgcaatcttcgtc 359
             |||||||| ||  ||| ||| ||||| |||||||| |||||||| |||||||||||||||
Sbjct: 84784 actgttttgtcagatggtagagtgatggctggagaggtcatcacttctgcaatcttcgtc 84725

                   
Query: 360   cttgac 365
              |||||
Sbjct: 84724 tttgac 84719

to top

>dbj|AK068163.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013135B04, full
            insert sequence
          Length = 4217

 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 67/75 (89%)
 Strand = Plus / Plus

                                                                        
Query: 221  acctattacttgattgtcctggtttactatcggtaatctgtggatcttcttcttgagcat 280
            |||||| |||||  ||||||| ||||| || ||||||||||||||||||||||| |||||
Sbjct: 2400 acctatcacttgtctgtcctgatttacaattggtaatctgtggatcttcttctttagcat 2459

                           
Query: 281  cagagctgcggcatc 295
            ||||||||| |||||
Sbjct: 2460 cagagctgccgcatc 2474



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 52/59 (88%)
 Strand = Plus / Plus

                                                                       
Query: 166  tctaaaacttcagcatggcctccaacgcgcgaagaacgtcatcgcgggtaactatacct 224
            |||||| || ||||| ||| |||||| |||||||||||||| | |||||||||||||||
Sbjct: 2213 tctaaacctccagcagggcttccaactcgcgaagaacgtcagcacgggtaactatacct 2271



 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 57/66 (86%)
 Strand = Plus / Plus

                                                                        
Query: 300  actgttttatcgcatgatagcgtgattgctggagatgtcatcacatctgcaatcttcgtc 359
            |||||||| ||  ||| ||| ||||| |||||||| |||||||| |||||||||||||||
Sbjct: 2569 actgttttgtcagatggtagagtgatggctggagaggtcatcacttctgcaatcttcgtc 2628

                  
Query: 360  cttgac 365
             |||||
Sbjct: 2629 tttgac 2634

to top

>gb|AC130222.4| Mus musculus BAC clone RP23-18K19 from chromosome 12, complete sequence
          Length = 218608

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 459   tgtccttcaacctccaccagtgc 481
             |||||||||||||||||||||||
Sbjct: 45611 tgtccttcaacctccaccagtgc 45589

to top

>gb|AC122227.4| Mus musculus BAC clone RP23-131H10 from chromosome 12, complete sequence
          Length = 208332

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 459    tgtccttcaacctccaccagtgc 481
              |||||||||||||||||||||||
Sbjct: 193011 tgtccttcaacctccaccagtgc 192989

to top

>gb|AC037492.5|AC037492 Homo sapiens chromosome 8, clone RP11-38H17, complete sequence
          Length = 168278

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 69     aaacacttttacatctatagga 90
              ||||||||||||||||||||||
Sbjct: 101167 aaacacttttacatctatagga 101188

to top

>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence
          Length = 3694126

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 541     cggtgctgatcgccggcgtg 560
               ||||||||||||||||||||
Sbjct: 2707464 cggtgctgatcgccggcgtg 2707445

to top

>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence
          Length = 3181762

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 411     catcggcgggcgctgtcgac 430
               ||||||||||||||||||||
Sbjct: 1917126 catcggcgggcgctgtcgac 1917145

to top

>gb|AC122541.3| Mus musculus BAC clone RP24-567D4 from chromosome 5, complete sequence
          Length = 166883

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 487    cccgctgtggccatcagcac 506
              ||||||||||||||||||||
Sbjct: 165810 cccgctgtggccatcagcac 165829

to top

>gb|AC138679.10| Mus musculus chromosome 5, clone RP23-177I4, complete sequence
          Length = 230184

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 487    cccgctgtggccatcagcac 506
              ||||||||||||||||||||
Sbjct: 189222 cccgctgtggccatcagcac 189203

to top

>ref|XM_841417.1| Trypanosoma brucei TREU927 hypothetical protein (Tb927.1.4760)
            partial mRNA
          Length = 3087

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 257  tctgtggatcttcttcttga 276
            ||||||||||||||||||||
Sbjct: 1378 tctgtggatcttcttcttga 1397

to top

>emb|AL591793.1|SME591793 Sinorhizobium meliloti 1021 complete chromosome; segment 12/12
          Length = 273785

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 536    cccctcggtgctgatcgccg 555
              ||||||||||||||||||||
Sbjct: 131917 cccctcggtgctgatcgccg 131898

to top

>gb|AC018738.4| Homo sapiens BAC clone RP11-419H23 from 2, complete sequence
          Length = 178530

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 268    tcttcttgagcatcagagct 287
              ||||||||||||||||||||
Sbjct: 171536 tcttcttgagcatcagagct 171517

to top

>ref|XM_815829.1| Trypanosoma cruzi strain CL Brener hypothetical protein
            (Tc00.1047053504153.290) partial mRNA
          Length = 1866

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 516  catggcctcgcgcaggagcg 535
            ||||||||||||||||||||
Sbjct: 1590 catggcctcgcgcaggagcg 1571

to top

>gb|CP000316.1| Polaromonas sp. JS666, complete genome
          Length = 5200264

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 501     cagcacgggcgtcgacatggcctcgcgc 528
               |||||| |||| ||||||||||||||||
Sbjct: 2872530 cagcactggcgacgacatggcctcgcgc 2872557

to top

>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete
             sequence
          Length = 3173005

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 411   catcggcgggcgctgtcgac 430
             ||||||||||||||||||||
Sbjct: 75837 catcggcgggcgctgtcgac 75856

to top

>gb|AC073576.23| Homo sapiens 12 BAC RP11-363M20 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 180309

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 455    gaagtgtccttcaacctcca 474
              ||||||||||||||||||||
Sbjct: 146928 gaagtgtccttcaacctcca 146909

to top

>ref|XM_696639.1| PREDICTED: Danio rerio hypothetical protein LOC555046 (LOC555046),
           mRNA
          Length = 1636

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 470 ctccaccagtgcctggtcccgctg 493
           ||||||||| ||||||||||||||
Sbjct: 197 ctccaccagagcctggtcccgctg 174

to top

>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 411     catcggcgggcgctgtcgac 430
               ||||||||||||||||||||
Sbjct: 2567233 catcggcgggcgctgtcgac 2567252

to top

>gb|AF131950.1| Human papillomavirus candHPV85, complete genome
          Length = 7812

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 52   tttgcgatacaggctacaaa 71
            ||||||||||||||||||||
Sbjct: 3734 tttgcgatacaggctacaaa 3753

to top

>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 543     gtgctgatcgccggcgtggg 562
               ||||||||||||||||||||
Sbjct: 3041412 gtgctgatcgccggcgtggg 3041393

to top

>ref|NM_001014321.1| Danio rerio zgc:113340 (zgc:113340), mRNA
          Length = 1775

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 470 ctccaccagtgcctggtcccgctg 493
           ||||||||| ||||||||||||||
Sbjct: 308 ctccaccagagcctggtcccgctg 285

to top

>gb|AC008750.9| Homo sapiens chromosome 19 clone CTD-2616J11, complete sequence
          Length = 143045

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 25    gctctcctaaatgctcccag 44
             ||||||||||||||||||||
Sbjct: 76812 gctctcctaaatgctcccag 76793

to top

>gb|AE004451.1| Pseudomonas aeruginosa PAO1, section 12 of 529 of the complete genome
          Length = 10700

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 182  ggcctccaacgcgcgaagaacgtcatcg 209
            ||||| ||| ||||||||||||||||||
Sbjct: 2227 ggcctgcaaggcgcgaagaacgtcatcg 2200

to top

>gb|BC091808.1| Danio rerio zgc:113340, mRNA (cDNA clone MGC:113340 IMAGE:7141285),
           complete cds
          Length = 1775

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 470 ctccaccagtgcctggtcccgctg 493
           ||||||||| ||||||||||||||
Sbjct: 308 ctccaccagagcctggtcccgctg 285

to top

>emb|AL355916.2|CNS05TD1 Human chromosome 14 DNA sequence BAC R-47I22 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 178484

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 455    gaagtgtccttcaacctcca 474
              ||||||||||||||||||||
Sbjct: 135650 gaagtgtccttcaacctcca 135631

to top

>dbj|AP002347.3| Homo sapiens genomic DNA, chromosome 11q, clone:CTD-2514A21, complete
              sequence
          Length = 130977

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 122    acatatttacagatccacaa 141
              ||||||||||||||||||||
Sbjct: 119986 acatatttacagatccacaa 119967

to top

>dbj|AP000790.4| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-736I10, complete
             sequence
          Length = 176944

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 122   acatatttacagatccacaa 141
             ||||||||||||||||||||
Sbjct: 30122 acatatttacagatccacaa 30103

to top

>gb|AC131803.3| Mus musculus BAC clone RP24-549I15 from chromosome 5, complete sequence
          Length = 168439

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 487   cccgctgtggccatcagcac 506
             ||||||||||||||||||||
Sbjct: 19204 cccgctgtggccatcagcac 19223


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,339,398
Number of Sequences: 3902068
Number of extensions: 4339398
Number of successful extensions: 73045
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 72643
Number of HSP's gapped (non-prelim): 394
length of query: 600
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 577
effective length of database: 17,143,297,704
effective search space: 9891682775208
effective search space used: 9891682775208
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

to top

full-length cDNA and EST

Clone Information

BLAST Search Result