Clone Name	rbasd2h11
Clone Library Name	barley_pub

---

No.	Definition	Score (bits)	E Value
1	dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome	1065	0.0
2	ref|XM_481016.1| Oryza sativa (japonica cultivar-group), mRNA	674	0.0
3	ref|XM_481017.1| Oryza sativa (japonica cultivar-group), mRNA	674	0.0
4	gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar N...	674	0.0
5	gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA...	674	0.0
6	gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-1...	674	0.0
7	emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chlor...	674	0.0
8	emb|BX569685.1|OSJN00291 Oryza sativa genomic DNA, chromosome 4,...	674	0.0
9	dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D...	674	0.0
10	dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D...	674	0.0
11	dbj|AP005161.3| Oryza sativa (japonica cultivar-group) genomic D...	674	0.0
12	dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome	674	0.0
13	ref|XM_479425.1| Oryza sativa (japonica cultivar-group), mRNA	666	0.0
14	dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D...	666	0.0
15	dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D...	666	0.0
16	dbj|AP005452.5| Oryza sativa (japonica cultivar-group) genomic D...	666	0.0
17	dbj|AP003825.3| Oryza sativa (japonica cultivar-group) genomic D...	666	0.0
18	dbj|AP005707.3| Oryza sativa (japonica cultivar-group) genomic D...	666	0.0
19	dbj|AP005683.2| Oryza sativa (japonica cultivar-group) genomic D...	666	0.0
20	dbj|AK072149.1| Oryza sativa (japonica cultivar-group) cDNA clon...	666	0.0
21	gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome...	660	0.0
22	gb|AC099402.2| Oryza sativa chromosome 10 clone OSJNBa0022D10, c...	660	0.0
23	dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D...	660	0.0
24	gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome...	660	0.0
25	emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome	585	e-164
26	gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome	585	e-164
27	emb|Y00329.1|CHZMRP22 Maize chloroplast rpl22 gene for ribosomal...	571	e-159
28	gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast,...	561	e-156
29	dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete ...	561	e-156
30	dbj|AP005675.3| Oryza sativa (japonica cultivar-group) genomic D...	539	e-150
31	dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D...	462	e-127
32	gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome...	462	e-127
33	emb|AL831799.3|CNS08CAC Oryza sativa chromosome 12, . BAC OSJNBa...	462	e-127
34	gb|DQ113925.1| Calamagrostis breweri isolate X17 trnH-psbA inter...	200	4e-48
35	gb|DQ113924.1| Calamagrostis breweri isolate RMP0198 trnH-psbA i...	200	4e-48
36	gb|DQ113923.1| Calamagrostis breweri isolate BW8259 trnH-psbA in...	200	4e-48
37	gb|DQ113922.1| Calamagrostis breweri isolate RMP0007 trnH-psbA i...	200	4e-48
38	gb|DQ113921.1| Calamagrostis muiriana isolate B4 trnH-psbA inter...	200	4e-48
39	gb|DQ113920.1| Calamagrostis muiriana isolate B3 trnH-psbA inter...	200	4e-48
40	gb|DQ113919.1| Calamagrostis muiriana isolate B1 trnH-psbA inter...	200	4e-48
41	gb|DQ113918.1| Calamagrostis muiriana isolate A7 trnH-psbA inter...	200	4e-48
42	gb|DQ113917.1| Calamagrostis muiriana isolate A1 trnH-psbA inter...	200	4e-48
43	gb|DQ369760.1| Festuca rubra isolate 3 PsbA (psbA) gene, partial...	200	4e-48
44	gb|DQ369756.1| Festuca arizonica isolate 1 PsbA (psbA) gene, par...	200	4e-48
45	emb|X13327.1|CHSCPSBA Secale cereale chloroplast psbA gene for h...	194	2e-46
46	gb|AY016310.1| Phragmites australis trnH-psbA intergenic spacer,...	194	2e-46
47	gb|AY769149.1| Paspalum vaginatum psbA-trnH intergenic spacer, p...	194	2e-46
48	gb|AY769148.1| Paspalum urvillei psbA-trnH intergenic spacer, pa...	194	2e-46
49	gb|AY769147.1| Paspalum subciliatum psbA-trnH intergenic spacer,...	194	2e-46
50	gb|AY769146.1| Paspalum ramboi psbA-trnH intergenic spacer, part...	194	2e-46
51	gb|AY769141.1| Paspalum minus psbA-trnH intergenic spacer, parti...	194	2e-46
52	gb|AY769139.1| Paspalum lividum psbA-trnH intergenic spacer, par...	194	2e-46
53	gb|AY769138.1| Paspalum lineare psbA-trnH intergenic spacer, par...	194	2e-46
54	gb|AY769137.1| Paspalum juergensii psbA-trnH intergenic spacer, ...	194	2e-46
55	gb|AY769136.1| Paspalum ionanthum psbA-trnH intergenic spacer, p...	194	2e-46
56	gb|AY769135.1| Paspalum intermedium psbA-trnH intergenic spacer,...	194	2e-46
57	gb|AY769134.1| Paspalum flaccidum psbA-trnH intergenic spacer, p...	194	2e-46
58	gb|AY769133.1| Paspalum filifolium psbA-trnH intergenic spacer, ...	194	2e-46
59	gb|AY769132.1| Paspalum equitans psbA-trnH intergenic spacer, pa...	194	2e-46
60	gb|AY769130.1| Paspalum dilatatum psbA-trnH intergenic spacer, p...	194	2e-46
61	gb|AY769128.1| Paspalum dasypleurum psbA-trnH intergenic spacer,...	194	2e-46
62	gb|AY769127.1| Paspalum cromyorhizon psbA-trnH intergenic spacer...	194	2e-46
63	gb|AY769126.1| Paspalum conduplicatum psbA-trnH intergenic space...	194	2e-46
64	gb|AY769124.1| Paspalum almum psbA-trnH intergenic spacer, parti...	194	2e-46
65	gb|AY769123.1| Paspalum acuminatum psbA-trnH intergenic spacer, ...	194	2e-46
66	gb|AY769122.1| Thrasya petrosa psbA-trnH intergenic spacer, part...	194	2e-46
67	gb|AY941127.1| Paspalum quadrifarium psbA-trnH intergenic spacer...	194	2e-46
68	gb|AY941126.1| Paspalum exaltatum psbA-trnH intergenic spacer, p...	194	2e-46
69	gb|AY941125.1| Paspalum quarinii psbA-trnH intergenic spacer, pa...	194	2e-46
70	gb|AY941123.1| Paspalum quadrifarium psbA-trnH intergenic spacer...	194	2e-46
71	gb|AY941122.1| Paspalum rufum psbA-trnH intergenic spacer, parti...	194	2e-46
72	gb|AY941121.1| Paspalum intermedium psbA-trnH intergenic spacer,...	194	2e-46
73	gb|AY941120.1| Paspalum haumanii psbA-trnH intergenic spacer, pa...	194	2e-46
74	gb|DQ006214.1| Chasmanthium latifolium voucher Wells 4431 US Psb...	194	2e-46
75	dbj|AB128634.1| Oryza granulata chloroplast DNA, containing SSR ...	192	1e-45
76	dbj|AB128633.1| Oryza granulata chloroplast DNA, containing SSR ...	192	1e-45
77	gb|AY769145.1| Paspalum pumilum psbA-trnH intergenic spacer, par...	186	6e-44
78	gb|AY769143.1| Paspalum pallens psbA-trnH intergenic spacer, par...	186	6e-44
79	gb|AY769142.1| Paspalum notatum psbA-trnH intergenic spacer, par...	186	6e-44
80	gb|DQ006178.1| Cyperus erythrorhizos voucher Wells 4458 US PsbA ...	186	6e-44
81	dbj|AB128631.1| Oryza ridleyi chloroplast DNA, containing SSR re...	184	2e-43
82	dbj|AB128630.1| Oryza longiglumis chloroplast DNA, containing SS...	184	2e-43
83	dbj|AB128629.1| Oryza ridleyi chloroplast DNA, containing SSR re...	184	2e-43
84	dbj|AB128628.1| Oryza longiglumis chloroplast DNA, containing SS...	184	2e-43
85	gb|AY506529.1| Zea mays strain NB mitochondrion, complete genome	182	9e-43
86	gb|DQ490952.1| Zea mays subsp. mays genotype male-fertile NA mit...	182	9e-43
87	gb|DQ490951.1| Zea mays subsp. mays genotype CMS-S mitochondrion...	182	9e-43
88	gb|DQ490953.1| Zea mays subsp. mays genotype CMS-T mitochondrion...	182	9e-43
89	gb|DQ369792.1| Festuca occidentalis isolate 17 PsbA (psbA) gene,...	182	9e-43
90	gb|DQ369758.1| Festuca valesiaca isolate 2 PsbA (psbA) gene, par...	182	9e-43
91	gb|AY769140.1| Paspalum maculosum psbA-trnH intergenic spacer, p...	180	4e-42
92	gb|AY769131.1| Paspalum ellipticum psbA-trnH intergenic spacer, ...	180	4e-42
93	gb|DQ369762.1| Festuca rubra isolate 4 PsbA (psbA) gene, partial...	180	4e-42
94	emb|Y00141.1|CHZMRP19 Maize chloroplast rps19 gene for ribosomal...	178	1e-41
95	gb|AY941124.1| Axonopus rosengurttii psbA-trnH intergenic spacer...	178	1e-41
96	gb|DQ006213.1| Arthraxon hispidus voucher Wells 5171 US PsbA (ps...	178	1e-41
97	emb|AL606447.3|OSJN00011 Oryza sativa genomic DNA, chromosome 4,...	176	6e-41
98	gb|AF527485.1| Chloroplast transformation vector pVSR326, comple...	176	6e-41
99	gb|AC025783.10| Oryza sativa chromosome 10 BAC OSJNBa0001O14 gen...	176	6e-41
100	gb|AC092750.2| Oryza sativa (japonica cultivar-group) cultivar N...	176	6e-41
101	dbj|AB128665.1| Oryza nivara chloroplast DNA, containing SSR reg...	176	6e-41
102	dbj|AB128664.1| Oryza eichingeri chloroplast DNA, containing SSR...	176	6e-41
103	dbj|AB128663.1| Oryza rhizomatis chloroplast DNA, containing SSR...	176	6e-41
104	dbj|AB128662.1| Oryza alta chloroplast DNA, containing SSR regio...	176	6e-41
105	dbj|AB128661.1| Oryza punctata chloroplast DNA, containing SSR r...	176	6e-41
106	dbj|AB128660.1| Oryza glumipatula chloroplast DNA, containing SS...	176	6e-41
107	dbj|AB128659.1| Oryza glumipatula chloroplast DNA, containing SS...	176	6e-41
108	dbj|AB128658.1| Oryza punctata chloroplast DNA, containing SSR r...	176	6e-41
109	dbj|AB128656.1| Oryza australiensis chloroplast DNA, containing ...	176	6e-41
110	dbj|AB128655.1| Oryza australiensis chloroplast DNA, containing ...	176	6e-41
111	dbj|AB128654.1| Oryza australiensis chloroplast DNA, containing ...	176	6e-41
112	dbj|AB128653.1| Oryza australiensis chloroplast DNA, containing ...	176	6e-41
113	dbj|AB128652.1| Oryza meridionalis chloroplast DNA, containing S...	176	6e-41
114	dbj|AB128651.1| Oryza meridionalis chloroplast DNA, containing S...	176	6e-41
115	dbj|AB128650.1| Oryza punctata chloroplast DNA, containing SSR r...	176	6e-41
116	dbj|AB128649.1| Oryza glumipatula chloroplast DNA, containing SS...	176	6e-41
117	dbj|AB128648.1| Oryza barthii chloroplast DNA, containing SSR re...	176	6e-41
118	dbj|AB128647.1| Oryza rufipogon chloroplast DNA, containing SSR ...	176	6e-41
119	dbj|AB128646.1| Oryza longistaminata chloroplast DNA, containing...	176	6e-41
120	dbj|AB128645.1| Oryza glumipatula chloroplast DNA, containing SS...	176	6e-41
121	dbj|AB128644.1| Oryza rufipogon chloroplast DNA, containing SSR ...	176	6e-41
122	dbj|AB128643.1| Oryza longistaminata chloroplast DNA, containing...	176	6e-41
123	dbj|AB128642.1| Oryza rufipogon chloroplast DNA, containing SSR ...	176	6e-41
124	dbj|AB128641.1| Oryza longistaminata chloroplast DNA, containing...	176	6e-41
125	dbj|AB128640.1| Oryza sativa chloroplast DNA, containing SSR reg...	176	6e-41
126	dbj|AB128639.1| Oryza rufipogon chloroplast DNA, containing SSR ...	176	6e-41
127	dbj|AB128638.1| Oryza glaberrima chloroplast DNA, containing SSR...	176	6e-41
128	dbj|AB128637.1| Leersia tisserantii chloroplast DNA, containing ...	176	6e-41
129	dbj|AB128636.1| Leersia tisserantii chloroplast DNA, containing ...	176	6e-41
130	dbj|AB128635.1| Oryza latifolia chloroplast DNA, containing SSR ...	176	6e-41
131	dbj|AB128632.1| Oryza australiensis chloroplast DNA, containing ...	176	6e-41
132	dbj|AB128627.1| Oryza grandiglumis chloroplast DNA, containing S...	176	6e-41
133	dbj|AB128626.1| Oryza alta chloroplast DNA, containing SSR regio...	176	6e-41
134	dbj|AB128625.1| Oryza grandiglumis chloroplast DNA, containing S...	176	6e-41
135	dbj|AB128624.1| Oryza punctata chloroplast DNA, containing SSR r...	176	6e-41
136	dbj|AB128623.1| Oryza punctata chloroplast DNA, containing SSR r...	176	6e-41
137	dbj|AB128622.1| Oryza eichingeri chloroplast DNA, containing SSR...	176	6e-41
138	dbj|AB128621.1| Oryza officinalis chloroplast DNA, containing SS...	176	6e-41
139	dbj|AB128620.1| Oryza officinalis chloroplast DNA, containing SS...	176	6e-41
140	dbj|AB128619.1| Oryza punctata chloroplast DNA, containing SSR r...	176	6e-41
141	dbj|AB128618.1| Oryza minuta chloroplast DNA, containing SSR reg...	176	6e-41
142	dbj|AB128617.1| Oryza latifolia chloroplast DNA, containing SSR ...	176	6e-41
143	dbj|AB128616.1| Oryza minuta chloroplast DNA, containing SSR reg...	176	6e-41
144	dbj|AB128615.1| Oryza officinalis chloroplast DNA, containing SS...	176	6e-41
145	gb|M22826.1|RICCPRPL Oryza sativa chloroplast ribosomal protein ...	176	6e-41
146	dbj|AP006052.3| Oryza sativa (japonica cultivar-group) genomic D...	176	6e-41
147	dbj|AP005483.3| Oryza sativa (japonica cultivar-group) genomic D...	176	6e-41
148	dbj|AP004662.3| Oryza sativa (japonica cultivar-group) genomic D...	176	6e-41
149	dbj|AK059477.1| Oryza sativa (japonica cultivar-group) cDNA clon...	176	6e-41
150	gb|L40578.1|RICCPRPM Oryza sativa chloroplast ribosomal protein ...	176	6e-41
151	gb|DQ369790.1| Festuca roemeri isolate 16 PsbA (psbA) gene, part...	174	2e-40
152	gb|DQ369788.1| Festuca roemeri isolate 15 PsbA (psbA) gene, part...	174	2e-40
153	gb|DQ369786.1| Festuca roemeri isolate 14 PsbA (psbA) gene, part...	174	2e-40
154	gb|DQ369784.1| Festuca roemeri isolate 13 PsbA (psbA) gene, part...	174	2e-40
155	gb|DQ369782.1| Festuca roemeri isolate 12 PsbA (psbA) gene, part...	174	2e-40
156	gb|DQ369780.1| Festuca roemeri isolate 11 PsbA (psbA) gene, part...	174	2e-40
157	gb|DQ369778.1| Festuca idahoensis isolate 10 PsbA (psbA) gene, p...	174	2e-40
158	gb|DQ369776.1| Festuca valesiaca isolate 9 PsbA (psbA) gene, par...	174	2e-40
159	gb|DQ369774.1| Festuca idahoensis isolate 8 PsbA (psbA) gene, pa...	174	2e-40
160	gb|DQ369772.1| Festuca roemeri isolate 7.2 PsbA (psbA) gene, par...	174	2e-40
161	gb|DQ369770.1| Festuca idahoensis isolate 7.1 PsbA (psbA) gene, ...	174	2e-40
162	gb|DQ369768.1| Festuca roemeri isolate 6.2 PsbA (psbA) gene, par...	174	2e-40
163	gb|DQ369766.1| Festuca idahoensis isolate 6.1 PsbA (psbA) gene, ...	174	2e-40
164	gb|AY769121.1| Axonopus polystachyus psbA-trnH intergenic spacer...	170	4e-39
165	gb|AY769119.1| Axonopus compressus psbA-trnH intergenic spacer, ...	170	4e-39
166	gb|AY769117.1| Axonopus argentinus psbA-trnH intergenic spacer, ...	170	4e-39
167	emb|AL732650.5|CNS08C9P Oryza sativa chromosome 12, . BAC OSJNBa...	168	1e-38
168	gb|AY769129.1| Paspalum dedeccae psbA-trnH intergenic spacer, pa...	167	6e-38
169	gb|DQ369764.1| Festuca idahoensis isolate 5 PsbA (psbA) gene, pa...	167	6e-38
170	gb|AY769144.1| Paspalum pauciciliatum psbA-trnH intergenic space...	157	5e-35
171	gb|AY769118.1| Axonopus brasiliensis psbA-trnH intergenic spacer...	157	5e-35
172	dbj|AB128657.1| Oryza brachyantha chloroplast DNA, containing SS...	151	3e-33
173	gb|AY769120.1| Axonopus siccus psbA-trnH intergenic spacer, part...	149	1e-32
174	emb|AL731585.5| Oryza sativa genomic DNA, chromosome 4, BAC clon...	141	3e-30
175	emb|AJ316582.1|ABE316582 Atropa belladonna complete chloroplast ...	133	8e-28
176	emb|Z00044.2|CHNTXX Nicotiana tabacum chloroplast genome DNA	117	5e-23
177	gb|DQ386163.1| Solanum tuberosum cultivar Desiree chloroplast, c...	117	5e-23
178	dbj|AB237912.1| Nicotiana sylvestris chloroplast DNA, complete s...	117	5e-23
179	dbj|AB240139.1| Nicotiana tomentosiformis chloroplast DNA, compl...	117	5e-23
180	gb|DQ231562.1| Solanum tuberosum chloroplast, complete genome	117	5e-23
181	gb|AY727185.1| Pseudotrillium rivale psbA-trnH intergenic spacer...	111	3e-21
182	emb|AM087200.2| Lycopersicon esculentum complete chloroplast genome	109	1e-20
183	gb|DQ347959.1| Lycopersicon esculentum cultivar LA3023 chloropla...	109	1e-20
184	gb|DQ347958.1| Solanum bulbocastanum cultivar PT29 chloroplast, ...	109	1e-20
185	gb|AY582139.1| Panax ginseng chloroplast, complete genome	103	7e-19
186	gb|DQ006171.1| Commelina communis voucher Wells 4872 US psbA-trn...	100	1e-17
187	dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D...	96	2e-16
188	dbj|AP003260.5| Oryza sativa (japonica cultivar-group) genomic D...	96	2e-16
189	gb|AY727187.1| Trillium ovatum psbA-trnH intergenic spacer, part...	96	2e-16
190	gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3	94	7e-16
191	gb|AC079633.9|AC079633 Genomic Sequence for Oryza sativa, Nippon...	94	7e-16
192	dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D...	94	7e-16
193	dbj|AP005880.4| Oryza sativa (japonica cultivar-group) genomic D...	94	7e-16
194	gb|AY780259.1| Eucalyptus globulus subsp. globulus chloroplast, ...	92	3e-15
195	gb|AY727186.1| Trillium texanum psbA-trnH intergenic spacer, par...	88	4e-14
196	gb|DQ006202.1| Trillium sessile voucher Wells 4879 US PsbA (psbA...	88	4e-14
197	gb|DQ345959.1| Gossypium hirsutum cultivar coker 310 FR chloropl...	86	2e-13
198	emb|AJ315790.1|OSA315790 Oryza sativa partial BP-73 gene for SAP...	86	2e-13
199	emb|AJ428413.1|CFE428413 Calycanthus fertilis var. ferax complet...	82	3e-12
200	emb|AJ970307.1| Cucumis sativus chloroplast complete genome	78	4e-11
201	gb|DQ119058.1| Cucumis sativus cultivar Baekmibaekdadagi plastid...	78	4e-11
202	emb|AJ627251.1| Nymphaea alba chloroplast, complete genome	72	2e-09
203	gb|AY916449.1| Phalaenopsis aphrodite subsp. formosana plastid, ...	72	2e-09
204	gb|AY962222.1| Hevea brasiliensis clone hmct52 microsatellite se...	68	4e-08
205	emb|X13336.1|CHSORP Spinacia oleracea plastid genes rps3, rps19,...	68	4e-08
206	emb|AJ400848.1|SOL400848 Spinacia oleracea complete chloroplast ...	68	4e-08
207	emb|AJ879453.1| Acorus calamus chloroplast, complete genome	68	4e-08
208	gb|DQ069474.1| Yucca schidigera ribosomal protein S19 (rps19) ge...	60	9e-06
209	gb|DQ383815.1| Helianthus annuus cultivar line HA383 chloroplast...	58	4e-05
210	gb|DQ069473.1| Typha latifolia ribosomal protein S19 (rps19) gen...	52	0.002
211	gb|AC120884.2| Oryza sativa (japonica cultivar-group) chromosome...	52	0.002
212	emb|X07521.1|HVD1PSBA Hordeum vulgare chloroplast psbA gene for ...	52	0.002
213	dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D...	52	0.002
214	gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome...	52	0.002
215	gb|M38374.1|BLYCPPSBAB Barley chloroplast herbicide-binding prot...	52	0.002
216	emb|X07942.1|CHHVPSBA Barley chloroplast psbA gene	52	0.002
217	gb|AC097174.2| Oryza sativa (japonica cultivar-group) chromosome...	50	0.009
218	dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D...	50	0.009
219	gb|DQ424856.1| Vitis vinifera cultivar Maxxa chloroplast, comple...	48	0.036
220	gb|DQ069472.1| Ranunculus macranthus ribosomal protein S19 (rps1...	46	0.14
221	gb|DQ069471.1| Nuphar advena ribosomal protein S19 (rps19) gene,...	46	0.14
222	emb|AJ506156.2|ATR506156 Amborella trichopoda chloroplast genomi...	46	0.14
223	gb|AY757822.1| Acorus gramineus Rps19 (rps19) gene, partial cds;...	44	0.56
224	gb|DQ191749.1| Dioscorea zingiberensis clone 2 from Baoshan Yunn...	44	0.56
225	gb|DQ191747.1| Dioscorea zingiberensis clone 2 from Hunan Provin...	44	0.56
226	gb|AF389766.1| Uncultured bacterium clone NIW3-1 dinitrogenase r...	44	0.56
227	gb|DQ069469.1| Acorus americanus ribosomal protein S19 (rps19) g...	44	0.56
228	gb|AY424708.1| Uncultured bacterium isolate DGGE band BDS17 NifH...	44	0.56
229	gb|AY424700.1| Uncultured bacterium isolate DGGE band BRS9 NifH ...	44	0.56
230	gb|AY424699.1| Uncultured bacterium isolate DGGE band BDS8 NifH ...	44	0.56
231	gb|DQ131105.1| Dioscorea zingiberensis psbA-trnH intergenic spac...	44	0.56
232	emb|AL607000.3|OSJN00132 Oryza sativa genomic DNA, chromosome 4,...	44	0.56
233	gb|DQ006176.1| Carex cephalophora voucher Lea 1483 US PsbA (psbA...	44	0.56
234	gb|AC135425.3| Oryza sativa (japonica cultivar-group) chromosome...	44	0.56
235	gb|AY386787.1| Bradyrhizobium liaoningense strain Spr3-7 nitroge...	42	2.2
236	gb|M81884.1|EPFCPCG Epifagus virginiana chloroplast, complete ge...	42	2.2
237	gb|AE007235.1| Sinorhizobium meliloti 1021 plasmid pSymA section...	42	2.2
238	gb|DQ480974.1| Uncultured bacterium clone RT-CLY_20 dinitrogenas...	42	2.2
239	gb|DQ480958.1| Uncultured bacterium clone RT-075_39 dinitrogenas...	42	2.2
240	gb|DQ480915.1| Uncultured bacterium clone UT-CLY_37 dinitrogenas...	42	2.2
241	gb|DQ480883.1| Uncultured bacterium clone UT-600_30 dinitrogenas...	42	2.2
242	gb|AF389770.1| Uncultured bacterium clone NIS16-4 dinitrogenase ...	42	2.2
243	gb|AF389775.1| Uncultured bacterium clone NIS15-3 dinitrogenase ...	42	2.2
244	gb|AF389778.1| Uncultured bacterium clone NIS14-4 dinitrogenase ...	42	2.2
245	gb|AF389779.1| Uncultured bacterium clone NIS14-3 dinitrogenase ...	42	2.2
246	gb|AF389783.1| Uncultured bacterium clone NIS13-3 dinitrogenase ...	42	2.2
247	gb|AF389790.1| Uncultured bacterium clone NIS11-3 dinitrogenase ...	42	2.2
248	gb|AY424732.1| Uncultured bacterium isolate DGGE band BDS41 NifH...	42	2.2
249	gb|AY424697.1| Uncultured bacterium isolate DGGE band BDS6 NifH ...	42	2.2
250	gb|AY221812.1| Xanthobacter flavus clone CC1080A1 dinitrogenase ...	42	2.2
251	gb|AY232321.1| Uncultured bacterium clone GN2018A1_RT dinitrogen...	42	2.2
252	gb|AY159600.1| Uncultured Sinorhizobium sp. clone nifH102 NifH (...	42	2.2
253	gb|AY159587.1| Uncultured Sinorhizobium sp. clone nifH11 NifH (n...	42	2.2
254	gb|AY360976.1| Uncultured bacterium cluster O NifH (nifH) gene, ...	42	2.2
255	gb|AY196404.1| Uncultured nitrogen-fixing bacterium clone g1-HW1...	42	2.2
256	ref|XM_804647.1| Trypanosoma cruzi strain CL Brener retrotranspo...	42	2.2
257	gb|AC119828.9| Mus musculus chromosome 10, clone RP23-186A24, co...	42	2.2
258	emb|AL606632.5| Oryza sativa genomic DNA, chromosome 4, BAC clon...	42	2.2
259	emb|AJ716367.1| Uncultured bacterium partial nifH gene for dinit...	42	2.2
260	emb|AJ716364.1| Uncultured bacterium partial nifH gene for dinit...	42	2.2
261	emb|AJ716363.1| Uncultured bacterium partial nifH gene for dinit...	42	2.2
262	emb|AJ716347.1| Uncultured bacterium partial nifH gene for dinit...	42	2.2
263	emb|AJ716276.1| Uncultured bacterium partial nifH gene for dinit...	42	2.2
264	emb|AJ716274.1| Uncultured bacterium partial nifH gene for dinit...	42	2.2
265	gb|AF484656.1| Sinorhizobium sp. xhj12s nitrogenase iron protein...	42	2.2
266	gb|AF484635.1| Bradyrhizobium sp. 48b nitrogenase iron protein-l...	42	2.2
267	gb|AF484634.1| Bradyrhizobium sp. 48a nitrogenase iron protein (...	42	2.2
268	gb|AF484633.1| Bradyrhizobium sp. 49b nitrogenase iron protein (...	42	2.2
269	gb|AF484632.1| Bradyrhizobium sp. 40a nitrogenase iron protein-l...	42	2.2
270	gb|AF484631.1| Bradyrhizobium sp. 125e nitrogenase iron protein ...	42	2.2
271	gb|AF484629.1| Bradyrhizobium sp. 108a1 nitrogenase iron protein...	42	2.2
272	gb|AF484628.1| Bradyrhizobium sp. 123b nitrogenase iron protein ...	42	2.2
273	dbj|AB217474.1| Sphingomonas azotifigens nifH gene for dinitroge...	42	2.2
274	dbj|AB182914.1| Pleomorphomonas oryzae nifH gene for Fe protein ...	42	2.2
275	gb|DQ413016.1| Sinorhizobium meliloti isolate RP254 NifH (nifH) ...	42	2.2
276	gb|DQ426077.1| Uncultured bacterium clone 25.101 NifH-like (nifH...	42	2.2
277	gb|DQ425401.1| Uncultured bacterium clone 4.77 NifH-like (nifH) ...	42	2.2
278	dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete ...	42	2.2
279	dbj|AB208384.1| Uncultured nitrogen-fixing bacterium mRNA for di...	42	2.2
280	gb|AF296349.1|AF296349 Xanthobacter autotrophicus clone p11xa di...	42	2.2
281	gb|AF296348.1|AF296348 Xanthobacter autotrophicus clone p10xa di...	42	2.2
282	gb|AY795615.1| Uncultured bacterium clone nifH.Pucci.S8 dinitrog...	42	2.2
283	gb|AC091522.23| Mus musculus strain C57BL/6J chromosome 10 clone...	42	2.2
284	gb|AY724114.2| Uncultured bacterium clone DUNnif031 (+1A) (OTU#0...	42	2.2
285	gb|AY724113.2| Uncultured bacterium clone DUNnif030 (+1A) (OTU#0...	42	2.2
286	gb|AY724112.2| Uncultured bacterium clone DUNnif029 (+1A) (OTU#0...	42	2.2
287	gb|AY724109.2| Uncultured bacterium clone DUNnif026 (+1A) (OTU#0...	42	2.2
288	gb|AY724102.2| Uncultured bacterium clone DUNnif021 (+1A) (OTU#0...	42	2.2
289	gb|AY724101.2| Uncultured bacterium clone DUNnif020 (+1A) (OTU#0...	42	2.2
290	gb|AY934877.1| Sinorhizobium sp. CCBAU 53044B nitrogenase reduct...	42	2.2
291	dbj|AP004703.3| Oryza sativa (japonica cultivar-group) genomic D...	42	2.2
292	gb|AY912768.1| Uncultured forest soil bacterium clone DUNnif377 ...	42	2.2
293	gb|AY912583.1| Uncultured forest soil bacterium clone DUNnif192 ...	42	2.2
294	gb|AY912577.1| Uncultured forest soil bacterium clone DUNnif186 ...	42	2.2
295	gb|AY912569.1| Uncultured forest soil bacterium clone DUNnif178 ...	42	2.2
296	gb|AY912555.1| Uncultured forest soil bacterium clone DUNnif164 ...	42	2.2
297	emb|AL662985.3|OSJN00189 Oryza sativa genomic DNA, chromosome 4,...	42	2.2
298	gb|AY829685.1| Uncultured bacterium clone TF25011 nitrogenase ir...	40	8.7
299	gb|DQ224696.1| Uncultured bacterium clone nif1004424L92 dinitrog...	40	8.7
300	gb|AY787583.1| Uncultured bacterium clone 52_Z65C nitrogenase ir...	40	8.7
301	gb|DQ059362.1| Uncultured bacterium clone 1C-4 dinitrogenase red...	40	8.7
302	gb|AC119244.12| Mus musculus chromosome 5, clone RP24-231P10, co...	40	8.7
303	gb|AC125025.7| Mus musculus chromosome 5, clone RP24-340K5, comp...	40	8.7
304	gb|DQ481381.1| Uncultured microorganism clone 19390A6 dinitrogen...	40	8.7
305	gb|DQ481379.1| Uncultured microorganism clone 19390A3 dinitrogen...	40	8.7
306	gb|DQ481376.1| Uncultured microorganism clone 19390A15 dinitroge...	40	8.7
307	gb|DQ481374.1| Uncultured microorganism clone 19390A13 dinitroge...	40	8.7
308	gb|DQ481034.1| Uncultured bacterium clone LT-CLY_21 dinitrogenas...	40	8.7
309	gb|DQ480917.1| Uncultured bacterium clone UT-CLY_45 dinitrogenas...	40	8.7
310	gb|AF389713.1| Uncultured bacterium clone SIW2-3 dinitrogenase r...	40	8.7
311	gb|AF315428.1| Uncultured temperate forest soil bacterium CF018a...	40	8.7
312	gb|AF035492.1| Uncultured bacterium NR1608 dinitrogenase reducta...	40	8.7
313	gb|AF035505.1| Uncultured bacterium NR1621 dinitrogenase reducta...	40	8.7
314	gb|AY221811.1| Sinorhizobium meliloti clone CC1079A1 dinitrogena...	40	8.7
315	gb|AC122399.4| Mus musculus BAC clone RP24-92B2 from chromosome ...	40	8.7
316	gb|AY196461.1| Uncultured nitrogen-fixing bacterium clone f1-PA3...	40	8.7
317	gb|AY196457.1| Uncultured nitrogen-fixing bacterium clone f1-HW9...	40	8.7
318	gb|AY196456.1| Uncultured nitrogen-fixing bacterium clone f1-HW8...	40	8.7
319	gb|AY196454.1| Uncultured nitrogen-fixing bacterium clone f1-HW5...	40	8.7
320	gb|AY196452.1| Uncultured nitrogen-fixing bacterium clone f1-HW3...	40	8.7
321	gb|AY196451.1| Uncultured nitrogen-fixing bacterium clone f1-HW2...	40	8.7
322	gb|AY196450.1| Uncultured nitrogen-fixing bacterium clone f1-HW1...	40	8.7
323	gb|AY196422.1| Uncultured nitrogen-fixing bacterium clone g1-HA1...	40	8.7
324	gb|AC125101.3| Mus musculus BAC clone RP24-207F9 from chromosome...	40	8.7
325	gb|AC127240.3| Mus musculus BAC clone RP24-387H11 from chromosom...	40	8.7
326	emb|CR388077.11| Zebrafish DNA sequence from clone CH211-286E11 ...	40	8.7
327	emb|AL365277.23| Human DNA sequence from clone RP11-69E11 on chr...	40	8.7
328	emb|AL355132.19| Human DNA sequence from clone RP11-181D10 on ch...	40	8.7
329	emb|AL034451.26|HS191E19 Human DNA sequence from clone RP1-191E1...	40	8.7
330	emb|BX323591.13| Zebrafish DNA sequence from clone CH211-208C6 i...	40	8.7
331	gb|AC149070.3| Xenopus tropicalis clone ISB1-185H2, complete seq...	40	8.7
332	dbj|AB188119.1| Rubrivivax gelatinosus nifH gene for iron protei...	40	8.7
333	gb|DQ398434.1| Uncultured cyanobacterium clone FALLSnif02D05 din...	40	8.7
334	gb|DQ398411.1| Uncultured cyanobacterium clone FALLSnif02A03 din...	40	8.7
335	gb|DQ426402.1| Uncultured bacterium clone 29.170 NifH-like (nifH...	40	8.7
336	gb|DQ426393.1| Uncultured bacterium clone 29.160 NifH-like (nifH...	40	8.7
337	gb|DQ426380.1| Uncultured bacterium clone 29.145 NifH-like (nifH...	40	8.7
338	gb|DQ426374.1| Uncultured bacterium clone 29.138 NifH-like (nifH...	40	8.7
339	gb|DQ426367.1| Uncultured bacterium clone 29.130 NifH-like (nifH...	40	8.7
340	gb|DQ426354.1| Uncultured bacterium clone 29.116 NifH-like (nifH...	40	8.7
341	gb|DQ426352.1| Uncultured bacterium clone 29.114 NifH-like (nifH...	40	8.7
342	gb|DQ426346.1| Uncultured bacterium clone 29.105 NifH-like (nifH...	40	8.7
343	gb|DQ426320.1| Uncultured bacterium clone 29.76 NifH-like (nifH)...	40	8.7
344	gb|DQ426319.1| Uncultured bacterium clone 29.75 NifH-like (nifH)...	40	8.7
345	gb|DQ426309.1| Uncultured bacterium clone 29.65 NifH-like (nifH)...	40	8.7
346	gb|DQ426297.1| Uncultured bacterium clone 29.53 NifH-like (nifH)...	40	8.7
347	gb|DQ426294.1| Uncultured bacterium clone 29.48 NifH-like (nifH)...	40	8.7
348	gb|DQ426289.1| Uncultured bacterium clone 29.43 NifH-like (nifH)...	40	8.7
349	gb|DQ426283.1| Uncultured bacterium clone 29.36 NifH-like (nifH)...	40	8.7
350	gb|DQ426270.1| Uncultured bacterium clone 29.12 NifH-like (nifH)...	40	8.7
351	gb|DQ425739.1| Uncultured bacterium clone 7.142 NifH-like (nifH)...	40	8.7
352	gb|AF369748.1|AF369748 Populus deltoides tRNA-His gene, complete...	40	8.7
353	gb|DQ140599.1| Uncultured bacterium clone nif1003301M15 dinitrog...	40	8.7
354	gb|AY228468.1| Pinus Koraiensis chloroplast, complete genome	40	8.7
355	gb|U97122.1|U97122 Azoarcus tolulyticus nitrogenase iron protein...	40	8.7
356	gb|AC079905.28| Homo sapiens 12 BAC RP11-813P10 (Roswell Park Ca...	40	8.7
357	gb|AF216931.1|AF216931 Unidentified nitrogen-fixing bacteria clo...	40	8.7
358	gb|AC175058.1| Mus musculus BAC clone RP23-210C4 from chromosome...	40	8.7
359	emb|AL954710.27| Mouse DNA sequence from clone RP23-275J10 on ch...	40	8.7
360	gb|AC144364.3| Didelphis virginiana clone LB3-157N2, complete se...	40	8.7
361	gb|AF046840.1|AF046840 Marine proteobacterium 'Sippewissett 2-21...	40	8.7
362	gb|AF046836.1|AF046836 Marine proteobacterium 'Bird Shoal 8-1' n...	40	8.7
363	gb|AF046830.1|AF046830 Marine proteobacterium 'Bird Shoal 1-2' n...	40	8.7
364	emb|CT010450.15| Mouse DNA sequence from clone RP23-443B9 on chr...	40	8.7
365	gb|AC138397.4| Mus musculus BAC clone RP23-65O11 from 8, complet...	40	8.7
366	dbj|AP000423.1| Arabidopsis thaliana chloroplast genomic DNA, co...	40	8.7
367	gb|DP000023.1| Didelphis virginiana target 1 genomic scaffold	40	8.7
368	emb|AL929310.8| Zebrafish DNA sequence from clone CH211-55A7, co...	40	8.7
369	emb|AL845167.7| Mouse DNA sequence from clone RP23-36P16 on chro...	40	8.7
370	dbj|D17510.1|PINCPTRPG Pinus thunbergii chloroplast DNA, complet...	40	8.7

---

>dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome
          Length = 134545

 Score = 1065 bits (537), Expect = 0.0
 Identities = 590/613 (96%)
 Strand = Plus / Plus

                                                                         
Query: 28    agatttctttactatatttagtacaattgttatatgacacatgcnnnnnnnnatagggaa 87
             ||||||||||||||||||||||||||||||||||||||||||||        || |||||
Sbjct: 79877 agatttctttactatatttagtacaattgttatatgacacatgcttttttttatggggaa 79936

                                                                         
Query: 88    actacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcggc 147
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 79937 actacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcggc 79996

                                                                         
Query: 148   tttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggctgc 207
             ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 79997 tttagtaataaataaattcgctttgtcgaaatccctataatgagtagcatttgcggctgc 80056

                                                                         
Query: 208   cgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatcat 267
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 80057 cgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatcat 80116

                                                                         
Query: 268   aacagtttcctcgtagtaacgccaccgaatctcgtcaagaactctttgtgctttgaaaac 327
             |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 80117 aacagtttcctcgtagtaacgccagcgaatctcgtcaagaactctttgtgctttgaaaac 80176

                                                                         
Query: 328   agacatagggatacgtttttgtgctttgaaaactctctcgaacttaagtagacgatcggt 387
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 80177 agacatagggatacgtttttgtgctttgaaaactctctcgaacttaagtagacgatcggt 80236

                                                                         
Query: 388   tggaactttccttgcgagtttccttagcccacttttcttcttctttatcctagggatata 447
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 80237 tggaactttccttgcgagtttccttagcccacttttcttcttctttatcctagggatata 80296

                                                                         
Query: 448   ctttactagtttgaaacttgtcataaataagtttattccccgcctacctttactttattt 507
             ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 80297 ctttactagtttgaaacttgtcataaataaggttattccccgcctacctttactttattt 80356

                                                                         
Query: 508   tgaatcnnnnnnnncttcttaatctttctattcagaattcagttaacgacgagatttagt 567
             ||||||        ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 80357 tgaatcttttttttcttcttaatctttctattcagaattcagttaacgacgagatttagt 80416

                                                                         
Query: 568   atcctttcttgcattttcataactcgtaaaatgccgagtaggcacgaattctcccaattt 627
             ||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||
Sbjct: 80417 atcctttcttgcattttcataactcgtgaaatgccgagtaggcacgaattcccccaattt 80476

                          
Query: 628   gcgacctaccata 640
             |||||||||||||
Sbjct: 80477 gcgacctaccata 80489



 Score =  220 bits (111), Expect = 4e-54
 Identities = 117/119 (98%)
 Strand = Plus / Minus

                                                                          
Query: 522    cttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcat 581
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134523 cttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcat 134464

                                                                         
Query: 582    tttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccata 640
              ||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 134463 tttcataactcgtgaaatgccgagtaggcacgaattcccccaatttgcgacctaccata 134405

---

>ref|XM_481016.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2472

 Score =  674 bits (340), Expect = 0.0
 Identities = 455/496 (91%)
 Strand = Plus / Minus

                                                                       
Query: 1   aatcttagatggatctaaaggttatttagatttctttactatatttagtacaattgttat 60
           |||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||
Sbjct: 806 aatcttagatggatctaaagattatttcgatttctttactatatttagtacaattgttat 747

                                                                       
Query: 61  atgacacatgcnnnnnnnnatagggaaactacgtcctcgagctcgaggtctgaatttctt 120
           ||||||||||         || ||  |||||||||||||||| |||||||||||||| ||
Sbjct: 746 atgacacatggttttttttatgggagaactacgtcctcgagcccgaggtctgaatttatt 687

                                                                       
Query: 121 cataatagtactcctactgacttcggctttagtaatgaataaattcgctttgtcgaaatc 180
           ||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||
Sbjct: 686 cataatagtactcctactgacttcggctttagtgatgaataaatttgctttgtcgaaatc 627

                                                                       
Query: 181 cctataatgagttgcatttgcggctgccgaataaaccaactttaagatgggataagatgc 240
           |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 626 cctataatgagtagcatttgctgctgccgaataaaccaactttaagatgggataagatgc 567

                                                                       
Query: 241 tcgatagggcatgaggttcagtatcataacagtttcctcgtagtaacgccaccgaatctc 300
           |||||| ||||||||||||| ||||||||||||||| |||||||||||||| ||||||||
Sbjct: 566 tcgataaggcatgaggttcaatatcataacagtttcttcgtagtaacgccaacgaatctc 507

                                                                       
Query: 301 gtcaagaactctttgtgctttgaaaacagacatagggatacgtttttgtgctttgaaaac 360
            || |||||||||||| |||||||||| |||||  |||| ||||||||||||||||||||
Sbjct: 506 atccagaactctttgtactttgaaaacggacatgtggatgcgtttttgtgctttgaaaac 447

                                                                       
Query: 361 tctctcgaacttaagtagacgatcggttggaactttccttgcgagtttccttagcccact 420
            |  |||||||||||||||||||||||||| ||||| |||||||||||||||||||||||
Sbjct: 446 ccgttcgaacttaagtagacgatcggttggtacttttcttgcgagtttccttagcccact 387

                                                                       
Query: 421 tttcttcttctttatcctagggatatactttactagtttgaaacttgtcataaataagtt 480
            ||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| |
Sbjct: 386 cttcttcttctttatcctaggggtatactttaccagtttgaaacttgtcataaataaggt 327

                           
Query: 481 tattccccgcctacct 496
           |||||||||| |||||
Sbjct: 326 tattccccgcttacct 311



 Score =  176 bits (89), Expect = 6e-41
 Identities = 107/113 (94%)
 Strand = Plus / Minus

                                                                       
Query: 528 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 587
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 289 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 230

                                                                
Query: 588 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccata 640
           ||||||| ||||||||||| || |||||||| |||||||||||||||||||||
Sbjct: 229 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccata 177

---

>ref|XM_481017.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2472

 Score =  674 bits (340), Expect = 0.0
 Identities = 455/496 (91%)
 Strand = Plus / Minus

                                                                       
Query: 1   aatcttagatggatctaaaggttatttagatttctttactatatttagtacaattgttat 60
           |||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||
Sbjct: 806 aatcttagatggatctaaagattatttcgatttctttactatatttagtacaattgttat 747

                                                                       
Query: 61  atgacacatgcnnnnnnnnatagggaaactacgtcctcgagctcgaggtctgaatttctt 120
           ||||||||||         || ||  |||||||||||||||| |||||||||||||| ||
Sbjct: 746 atgacacatggttttttttatgggagaactacgtcctcgagcccgaggtctgaatttatt 687

                                                                       
Query: 121 cataatagtactcctactgacttcggctttagtaatgaataaattcgctttgtcgaaatc 180
           ||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||
Sbjct: 686 cataatagtactcctactgacttcggctttagtgatgaataaatttgctttgtcgaaatc 627

                                                                       
Query: 181 cctataatgagttgcatttgcggctgccgaataaaccaactttaagatgggataagatgc 240
           |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 626 cctataatgagtagcatttgctgctgccgaataaaccaactttaagatgggataagatgc 567

                                                                       
Query: 241 tcgatagggcatgaggttcagtatcataacagtttcctcgtagtaacgccaccgaatctc 300
           |||||| ||||||||||||| ||||||||||||||| |||||||||||||| ||||||||
Sbjct: 566 tcgataaggcatgaggttcaatatcataacagtttcttcgtagtaacgccaacgaatctc 507

                                                                       
Query: 301 gtcaagaactctttgtgctttgaaaacagacatagggatacgtttttgtgctttgaaaac 360
            || |||||||||||| |||||||||| |||||  |||| ||||||||||||||||||||
Sbjct: 506 atccagaactctttgtactttgaaaacggacatgtggatgcgtttttgtgctttgaaaac 447

                                                                       
Query: 361 tctctcgaacttaagtagacgatcggttggaactttccttgcgagtttccttagcccact 420
            |  |||||||||||||||||||||||||| ||||| |||||||||||||||||||||||
Sbjct: 446 ccgttcgaacttaagtagacgatcggttggtacttttcttgcgagtttccttagcccact 387

                                                                       
Query: 421 tttcttcttctttatcctagggatatactttactagtttgaaacttgtcataaataagtt 480
            ||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| |
Sbjct: 386 cttcttcttctttatcctaggggtatactttaccagtttgaaacttgtcataaataaggt 327

                           
Query: 481 tattccccgcctacct 496
           |||||||||| |||||
Sbjct: 326 tattccccgcttacct 311



 Score =  176 bits (89), Expect = 6e-41
 Identities = 107/113 (94%)
 Strand = Plus / Minus

                                                                       
Query: 528 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 587
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 289 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 230

                                                                
Query: 588 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccata 640
           ||||||| ||||||||||| || |||||||| |||||||||||||||||||||
Sbjct: 229 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccata 177

---

>gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare chloroplast,
             complete genome
          Length = 134551

 Score =  674 bits (340), Expect = 0.0
 Identities = 455/496 (91%)
 Strand = Plus / Plus

                                                                         
Query: 1     aatcttagatggatctaaaggttatttagatttctttactatatttagtacaattgttat 60
             |||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||
Sbjct: 80110 aatcttagatggatctaaagattatttcgatttctttactatatttagtacaattgttat 80169

                                                                         
Query: 61    atgacacatgcnnnnnnnnatagggaaactacgtcctcgagctcgaggtctgaatttctt 120
             ||||||||||         || ||  |||||||||||||||| |||||||||||||| ||
Sbjct: 80170 atgacacatggttttttttatgggagaactacgtcctcgagcccgaggtctgaatttatt 80229

                                                                         
Query: 121   cataatagtactcctactgacttcggctttagtaatgaataaattcgctttgtcgaaatc 180
             ||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||
Sbjct: 80230 cataatagtactcctactgacttcggctttagtgatgaataaatttgctttgtcgaaatc 80289

                                                                         
Query: 181   cctataatgagttgcatttgcggctgccgaataaaccaactttaagatgggataagatgc 240
             |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 80290 cctataatgagtagcatttgctgctgccgaataaaccaactttaagatgggataagatgc 80349

                                                                         
Query: 241   tcgatagggcatgaggttcagtatcataacagtttcctcgtagtaacgccaccgaatctc 300
             |||||| ||||||||||||| ||||||||||||||| |||||||||||||| ||||||||
Sbjct: 80350 tcgataaggcatgaggttcaatatcataacagtttcttcgtagtaacgccaacgaatctc 80409

                                                                         
Query: 301   gtcaagaactctttgtgctttgaaaacagacatagggatacgtttttgtgctttgaaaac 360
              || |||||||||||| |||||||||| |||||  |||| ||||||||||||||||||||
Sbjct: 80410 atccagaactctttgtactttgaaaacggacatgtggatgcgtttttgtgctttgaaaac 80469

                                                                         
Query: 361   tctctcgaacttaagtagacgatcggttggaactttccttgcgagtttccttagcccact 420
              |  |||||||||||||||||||||||||| ||||| |||||||||||||||||||||||
Sbjct: 80470 ccgttcgaacttaagtagacgatcggttggtacttttcttgcgagtttccttagcccact 80529

                                                                         
Query: 421   tttcttcttctttatcctagggatatactttactagtttgaaacttgtcataaataagtt 480
              ||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| |
Sbjct: 80530 cttcttcttctttatcctaggggtatactttaccagtttgaaacttgtcataaataaggt 80589

                             
Query: 481   tattccccgcctacct 496
             |||||||||| |||||
Sbjct: 80590 tattccccgcttacct 80605



 Score =  176 bits (89), Expect = 6e-41
 Identities = 107/113 (94%)
 Strand = Plus / Minus

                                                                          
Query: 528    aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 587
              ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 134529 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 134470

                                                                   
Query: 588    aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccata 640
              ||||||| ||||||||||| || |||||||| |||||||||||||||||||||
Sbjct: 134469 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccata 134417



 Score =  176 bits (89), Expect = 6e-41
 Identities = 107/113 (94%)
 Strand = Plus / Plus

                                                                         
Query: 528   aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 587
             ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 80627 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 80686

                                                                  
Query: 588   aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccata 640
             ||||||| ||||||||||| || |||||||| |||||||||||||||||||||
Sbjct: 80687 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccata 80739

---

>gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA64S chloroplast,
             complete genome
          Length = 134551

 Score =  674 bits (340), Expect = 0.0
 Identities = 455/496 (91%)
 Strand = Plus / Plus

                                                                         
Query: 1     aatcttagatggatctaaaggttatttagatttctttactatatttagtacaattgttat 60
             |||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||
Sbjct: 80110 aatcttagatggatctaaagattatttcgatttctttactatatttagtacaattgttat 80169

                                                                         
Query: 61    atgacacatgcnnnnnnnnatagggaaactacgtcctcgagctcgaggtctgaatttctt 120
             ||||||||||         || ||  |||||||||||||||| |||||||||||||| ||
Sbjct: 80170 atgacacatggttttttttatgggagaactacgtcctcgagcccgaggtctgaatttatt 80229

                                                                         
Query: 121   cataatagtactcctactgacttcggctttagtaatgaataaattcgctttgtcgaaatc 180
             ||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||
Sbjct: 80230 cataatagtactcctactgacttcggctttagtgatgaataaatttgctttgtcgaaatc 80289

                                                                         
Query: 181   cctataatgagttgcatttgcggctgccgaataaaccaactttaagatgggataagatgc 240
             |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 80290 cctataatgagtagcatttgctgctgccgaataaaccaactttaagatgggataagatgc 80349

                                                                         
Query: 241   tcgatagggcatgaggttcagtatcataacagtttcctcgtagtaacgccaccgaatctc 300
             |||||| ||||||||||||| ||||||||||||||| |||||||||||||| ||||||||
Sbjct: 80350 tcgataaggcatgaggttcaatatcataacagtttcttcgtagtaacgccaacgaatctc 80409

                                                                         
Query: 301   gtcaagaactctttgtgctttgaaaacagacatagggatacgtttttgtgctttgaaaac 360
              || |||||||||||| |||||||||| |||||  |||| ||||||||||||||||||||
Sbjct: 80410 atccagaactctttgtactttgaaaacggacatgtggatgcgtttttgtgctttgaaaac 80469

                                                                         
Query: 361   tctctcgaacttaagtagacgatcggttggaactttccttgcgagtttccttagcccact 420
              |  |||||||||||||||||||||||||| ||||| |||||||||||||||||||||||
Sbjct: 80470 ccgttcgaacttaagtagacgatcggttggtacttttcttgcgagtttccttagcccact 80529

                                                                         
Query: 421   tttcttcttctttatcctagggatatactttactagtttgaaacttgtcataaataagtt 480
              ||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| |
Sbjct: 80530 cttcttcttctttatcctaggggtatactttaccagtttgaaacttgtcataaataaggt 80589

                             
Query: 481   tattccccgcctacct 496
             |||||||||| |||||
Sbjct: 80590 tattccccgcttacct 80605



 Score =  176 bits (89), Expect = 6e-41
 Identities = 107/113 (94%)
 Strand = Plus / Minus

                                                                          
Query: 528    aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 587
              ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 134529 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 134470

                                                                   
Query: 588    aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccata 640
              ||||||| ||||||||||| || |||||||| |||||||||||||||||||||
Sbjct: 134469 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccata 134417



 Score =  176 bits (89), Expect = 6e-41
 Identities = 107/113 (94%)
 Strand = Plus / Plus

                                                                         
Query: 528   aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 587
             ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 80627 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 80686

                                                                  
Query: 588   aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccata 640
             ||||||| ||||||||||| || |||||||| |||||||||||||||||||||
Sbjct: 80687 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccata 80739

---

>gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-11 chloroplast,
             complete genome
          Length = 134496

 Score =  674 bits (340), Expect = 0.0
 Identities = 455/496 (91%)
 Strand = Plus / Plus

                                                                         
Query: 1     aatcttagatggatctaaaggttatttagatttctttactatatttagtacaattgttat 60
             |||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||
Sbjct: 80053 aatcttagatggatctaaagattatttcgatttctttactatatttagtacaattgttat 80112

                                                                         
Query: 61    atgacacatgcnnnnnnnnatagggaaactacgtcctcgagctcgaggtctgaatttctt 120
             ||||||||||         || ||  |||||||||||||||| |||||||||||||| ||
Sbjct: 80113 atgacacatggttttttttatgggagaactacgtcctcgagcccgaggtctgaatttatt 80172

                                                                         
Query: 121   cataatagtactcctactgacttcggctttagtaatgaataaattcgctttgtcgaaatc 180
             ||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||
Sbjct: 80173 cataatagtactcctactgacttcggctttagtgatgaataaatttgctttgtcgaaatc 80232

                                                                         
Query: 181   cctataatgagttgcatttgcggctgccgaataaaccaactttaagatgggataagatgc 240
             |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 80233 cctataatgagtagcatttgctgctgccgaataaaccaactttaagatgggataagatgc 80292

                                                                         
Query: 241   tcgatagggcatgaggttcagtatcataacagtttcctcgtagtaacgccaccgaatctc 300
             |||||| ||||||||||||| ||||||||||||||| |||||||||||||| ||||||||
Sbjct: 80293 tcgataaggcatgaggttcaatatcataacagtttcttcgtagtaacgccaacgaatctc 80352

                                                                         
Query: 301   gtcaagaactctttgtgctttgaaaacagacatagggatacgtttttgtgctttgaaaac 360
              || |||||||||||| |||||||||| |||||  |||| ||||||||||||||||||||
Sbjct: 80353 atccagaactctttgtactttgaaaacggacatgtggatgcgtttttgtgctttgaaaac 80412

                                                                         
Query: 361   tctctcgaacttaagtagacgatcggttggaactttccttgcgagtttccttagcccact 420
              |  |||||||||||||||||||||||||| ||||| |||||||||||||||||||||||
Sbjct: 80413 ccgttcgaacttaagtagacgatcggttggtacttttcttgcgagtttccttagcccact 80472

                                                                         
Query: 421   tttcttcttctttatcctagggatatactttactagtttgaaacttgtcataaataagtt 480
              ||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| |
Sbjct: 80473 cttcttcttctttatcctaggggtatactttaccagtttgaaacttgtcataaataaggt 80532

                             
Query: 481   tattccccgcctacct 496
             |||||||||| |||||
Sbjct: 80533 tattccccgcttacct 80548



 Score =  176 bits (89), Expect = 6e-41
 Identities = 107/113 (94%)
 Strand = Plus / Minus

                                                                          
Query: 528    aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 587
              ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 134478 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 134419

                                                                   
Query: 588    aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccata 640
              ||||||| ||||||||||| || |||||||| |||||||||||||||||||||
Sbjct: 134418 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccata 134366



 Score =  176 bits (89), Expect = 6e-41
 Identities = 107/113 (94%)
 Strand = Plus / Plus

                                                                         
Query: 528   aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 587
             ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 80572 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 80631

                                                                  
Query: 588   aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccata 640
             ||||||| ||||||||||| || |||||||| |||||||||||||||||||||
Sbjct: 80632 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccata 80684

---

>emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chloroplast genome
          Length = 134525

 Score =  674 bits (340), Expect = 0.0
 Identities = 455/496 (91%)
 Strand = Plus / Plus

                                                                         
Query: 1     aatcttagatggatctaaaggttatttagatttctttactatatttagtacaattgttat 60
             |||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||
Sbjct: 80098 aatcttagatggatctaaagattatttcgatttctttactatatttagtacaattgttat 80157

                                                                         
Query: 61    atgacacatgcnnnnnnnnatagggaaactacgtcctcgagctcgaggtctgaatttctt 120
             ||||||||||         || ||  |||||||||||||||| |||||||||||||| ||
Sbjct: 80158 atgacacatggttttttttatgggagaactacgtcctcgagcccgaggtctgaatttatt 80217

                                                                         
Query: 121   cataatagtactcctactgacttcggctttagtaatgaataaattcgctttgtcgaaatc 180
             ||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||
Sbjct: 80218 cataatagtactcctactgacttcggctttagtgatgaataaatttgctttgtcgaaatc 80277

                                                                         
Query: 181   cctataatgagttgcatttgcggctgccgaataaaccaactttaagatgggataagatgc 240
             |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 80278 cctataatgagtagcatttgctgctgccgaataaaccaactttaagatgggataagatgc 80337

                                                                         
Query: 241   tcgatagggcatgaggttcagtatcataacagtttcctcgtagtaacgccaccgaatctc 300
             |||||| ||||||||||||| ||||||||||||||| |||||||||||||| ||||||||
Sbjct: 80338 tcgataaggcatgaggttcaatatcataacagtttcttcgtagtaacgccaacgaatctc 80397

                                                                         
Query: 301   gtcaagaactctttgtgctttgaaaacagacatagggatacgtttttgtgctttgaaaac 360
              || |||||||||||| |||||||||| |||||  |||| ||||||||||||||||||||
Sbjct: 80398 atccagaactctttgtactttgaaaacggacatgtggatgcgtttttgtgctttgaaaac 80457

                                                                         
Query: 361   tctctcgaacttaagtagacgatcggttggaactttccttgcgagtttccttagcccact 420
              |  |||||||||||||||||||||||||| ||||| |||||||||||||||||||||||
Sbjct: 80458 ccgttcgaacttaagtagacgatcggttggtacttttcttgcgagtttccttagcccact 80517

                                                                         
Query: 421   tttcttcttctttatcctagggatatactttactagtttgaaacttgtcataaataagtt 480
              ||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| |
Sbjct: 80518 cttcttcttctttatcctaggggtatactttaccagtttgaaacttgtcataaataaggt 80577

                             
Query: 481   tattccccgcctacct 496
             |||||||||| |||||
Sbjct: 80578 tattccccgcttacct 80593



 Score =  176 bits (89), Expect = 6e-41
 Identities = 107/113 (94%)
 Strand = Plus / Minus

                                                                          
Query: 528    aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 587
              ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 134503 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 134444

                                                                   
Query: 588    aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccata 640
              ||||||| ||||||||||| || |||||||| |||||||||||||||||||||
Sbjct: 134443 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccata 134391



 Score =  176 bits (89), Expect = 6e-41
 Identities = 107/113 (94%)
 Strand = Plus / Plus

                                                                         
Query: 528   aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 587
             ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 80615 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 80674

                                                                  
Query: 588   aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccata 640
             ||||||| ||||||||||| || |||||||| |||||||||||||||||||||
Sbjct: 80675 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccata 80727

---

>emb|BX569685.1|OSJN00291 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0061C08,
             complete sequence
          Length = 145980

 Score =  674 bits (340), Expect = 0.0
 Identities = 455/496 (91%)
 Strand = Plus / Minus

                                                                         
Query: 1     aatcttagatggatctaaaggttatttagatttctttactatatttagtacaattgttat 60
             |||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||
Sbjct: 70644 aatcttagatggatctaaagattattttgatttctttactatatttagtacaattgttat 70585

                                                                         
Query: 61    atgacacatgcnnnnnnnnatagggaaactacgtcctcgagctcgaggtctgaatttctt 120
             ||||||||||         || ||  |||||||||||||||| |||||||||||||| ||
Sbjct: 70584 atgacacatggttttttttatgggagaactacgtcctcgagcccgaggtctgaatttatt 70525

                                                                         
Query: 121   cataatagtactcctactgacttcggctttagtaatgaataaattcgctttgtcgaaatc 180
             ||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||
Sbjct: 70524 cataatagtactcctactgacttcggctttagtgatgaataaatttgctttgtcgaaatc 70465

                                                                         
Query: 181   cctataatgagttgcatttgcggctgccgaataaaccaactttaagatgggataagatgc 240
             |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 70464 cctataatgagtagcatttgctgctgccgaataaaccaactttaagatgggataagatgc 70405

                                                                         
Query: 241   tcgatagggcatgaggttcagtatcataacagtttcctcgtagtaacgccaccgaatctc 300
             |||||| ||||||||||||| ||||||||||||||| |||||||||||||| ||||||||
Sbjct: 70404 tcgataaggcatgaggttcaatatcataacagtttcttcgtagtaacgccaacgaatctc 70345

                                                                         
Query: 301   gtcaagaactctttgtgctttgaaaacagacatagggatacgtttttgtgctttgaaaac 360
              || |||||||||||| |||||||||| |||||  |||| ||||||||||||||||||||
Sbjct: 70344 atccagaactctttgtactttgaaaacggacatgtggatgcgtttttgtgctttgaaaac 70285

                                                                         
Query: 361   tctctcgaacttaagtagacgatcggttggaactttccttgcgagtttccttagcccact 420
              |  |||||||||||||||||||||||||| ||||| |||||||||||||||||||||||
Sbjct: 70284 ccgttcgaacttaagtagacgatcggttggtacttttcttgcgagtttccttagcccact 70225

                                                                         
Query: 421   tttcttcttctttatcctagggatatactttactagtttgaaacttgtcataaataagtt 480
              ||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| |
Sbjct: 70224 cttcttcttctttatcctaggggtatactttaccagtttgaaacttgtcataaataaggt 70165

                             
Query: 481   tattccccgcctacct 496
             |||||||||| |||||
Sbjct: 70164 tattccccgcttacct 70149



 Score =  176 bits (89), Expect = 6e-41
 Identities = 107/113 (94%)
 Strand = Plus / Minus

                                                                         
Query: 528   aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 587
             ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 70125 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 70066

                                                                  
Query: 588   aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccata 640
             ||||||| ||||||||||| || |||||||| |||||||||||||||||||||
Sbjct: 70065 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccata 70013



 Score =  176 bits (89), Expect = 6e-41
 Identities = 107/113 (94%)
 Strand = Plus / Plus

                                                                         
Query: 528   aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 587
             ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 53236 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 53295

                                                                  
Query: 588   aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccata 640
             ||||||| ||||||||||| || |||||||| |||||||||||||||||||||
Sbjct: 53296 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccata 53348

---

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
               sequence
          Length = 35498469

 Score =  674 bits (340), Expect = 0.0
 Identities = 455/496 (91%)
 Strand = Plus / Plus

                                                                           
Query: 1       aatcttagatggatctaaaggttatttagatttctttactatatttagtacaattgttat 60
               |||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||
Sbjct: 9212533 aatcttagatggatctaaagattattttgatttctttactatatttagtacaattgttat 9212592

                                                                           
Query: 61      atgacacatgcnnnnnnnnatagggaaactacgtcctcgagctcgaggtctgaatttctt 120
               ||||||||||         || ||  |||||||||||||||| |||||||||||||| ||
Sbjct: 9212593 atgacacatggttttttttatgggagaactacgtcctcgagcccgaggtctgaatttatt 9212652

                                                                           
Query: 121     cataatagtactcctactgacttcggctttagtaatgaataaattcgctttgtcgaaatc 180
               ||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||
Sbjct: 9212653 cataatagtactcctactgacttcggctttagtgatgaataaatttgctttgtcgaaatc 9212712

                                                                           
Query: 181     cctataatgagttgcatttgcggctgccgaataaaccaactttaagatgggataagatgc 240
               |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 9212713 cctataatgagtagcatttgctgctgccgaataaaccaactttaagatgggataagatgc 9212772

                                                                           
Query: 241     tcgatagggcatgaggttcagtatcataacagtttcctcgtagtaacgccaccgaatctc 300
               |||||| ||||||||||||| ||||||||||||||| |||||||||||||| ||||||||
Sbjct: 9212773 tcgataaggcatgaggttcaatatcataacagtttcttcgtagtaacgccaacgaatctc 9212832

                                                                           
Query: 301     gtcaagaactctttgtgctttgaaaacagacatagggatacgtttttgtgctttgaaaac 360
                || |||||||||||| |||||||||| |||||  |||| ||||||||||||||||||||
Sbjct: 9212833 atccagaactctttgtactttgaaaacggacatgtggatgcgtttttgtgctttgaaaac 9212892

                                                                           
Query: 361     tctctcgaacttaagtagacgatcggttggaactttccttgcgagtttccttagcccact 420
                |  |||||||||||||||||||||||||| ||||| |||||||||||||||||||||||
Sbjct: 9212893 ccgttcgaacttaagtagacgatcggttggtacttttcttgcgagtttccttagcccact 9212952

                                                                           
Query: 421     tttcttcttctttatcctagggatatactttactagtttgaaacttgtcataaataagtt 480
                ||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| |
Sbjct: 9212953 cttcttcttctttatcctaggggtatactttaccagtttgaaacttgtcataaataaggt 9213012

                               
Query: 481     tattccccgcctacct 496
               |||||||||| |||||
Sbjct: 9213013 tattccccgcttacct 9213028



 Score =  674 bits (340), Expect = 0.0
 Identities = 455/496 (91%)
 Strand = Plus / Minus

                                                                           
Query: 1       aatcttagatggatctaaaggttatttagatttctttactatatttagtacaattgttat 60
               |||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||
Sbjct: 9189571 aatcttagatggatctaaagattattttgatttctttactatatttagtacaattgttat 9189512

                                                                           
Query: 61      atgacacatgcnnnnnnnnatagggaaactacgtcctcgagctcgaggtctgaatttctt 120
               ||||||||||         || ||  |||||||||||||||| |||||||||||||| ||
Sbjct: 9189511 atgacacatggttttttttatgggagaactacgtcctcgagcccgaggtctgaatttatt 9189452

                                                                           
Query: 121     cataatagtactcctactgacttcggctttagtaatgaataaattcgctttgtcgaaatc 180
               ||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||
Sbjct: 9189451 cataatagtactcctactgacttcggctttagtgatgaataaatttgctttgtcgaaatc 9189392

                                                                           
Query: 181     cctataatgagttgcatttgcggctgccgaataaaccaactttaagatgggataagatgc 240
               |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 9189391 cctataatgagtagcatttgctgctgccgaataaaccaactttaagatgggataagatgc 9189332

                                                                           
Query: 241     tcgatagggcatgaggttcagtatcataacagtttcctcgtagtaacgccaccgaatctc 300
               |||||| ||||||||||||| ||||||||||||||| |||||||||||||| ||||||||
Sbjct: 9189331 tcgataaggcatgaggttcaatatcataacagtttcttcgtagtaacgccaacgaatctc 9189272

                                                                           
Query: 301     gtcaagaactctttgtgctttgaaaacagacatagggatacgtttttgtgctttgaaaac 360
                || |||||||||||| |||||||||| |||||  |||| ||||||||||||||||||||
Sbjct: 9189271 atccagaactctttgtactttgaaaacggacatgtggatgcgtttttgtgctttgaaaac 9189212

                                                                           
Query: 361     tctctcgaacttaagtagacgatcggttggaactttccttgcgagtttccttagcccact 420
                |  |||||||||||||||||||||||||| ||||| |||||||||||||||||||||||
Sbjct: 9189211 ccgttcgaacttaagtagacgatcggttggtacttttcttgcgagtttccttagcccact 9189152

                                                                           
Query: 421     tttcttcttctttatcctagggatatactttactagtttgaaacttgtcataaataagtt 480
                ||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| |
Sbjct: 9189151 cttcttcttctttatcctaggggtatactttaccagtttgaaacttgtcataaataaggt 9189092

                               
Query: 481     tattccccgcctacct 496
               |||||||||| |||||
Sbjct: 9189091 tattccccgcttacct 9189076



 Score =  674 bits (340), Expect = 0.0
 Identities = 455/496 (91%)
 Strand = Plus / Minus

                                                                           
Query: 1       aatcttagatggatctaaaggttatttagatttctttactatatttagtacaattgttat 60
               |||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||
Sbjct: 9112618 aatcttagatggatctaaagattattttgatttctttactatatttagtacaattgttat 9112559

                                                                           
Query: 61      atgacacatgcnnnnnnnnatagggaaactacgtcctcgagctcgaggtctgaatttctt 120
               ||||||||||         || ||  |||||||||||||||| |||||||||||||| ||
Sbjct: 9112558 atgacacatggttttttttatgggagaactacgtcctcgagcccgaggtctgaatttatt 9112499

                                                                           
Query: 121     cataatagtactcctactgacttcggctttagtaatgaataaattcgctttgtcgaaatc 180
               ||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||
Sbjct: 9112498 cataatagtactcctactgacttcggctttagtgatgaataaatttgctttgtcgaaatc 9112439

                                                                           
Query: 181     cctataatgagttgcatttgcggctgccgaataaaccaactttaagatgggataagatgc 240
               |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 9112438 cctataatgagtagcatttgctgctgccgaataaaccaactttaagatgggataagatgc 9112379

                                                                           
Query: 241     tcgatagggcatgaggttcagtatcataacagtttcctcgtagtaacgccaccgaatctc 300
               |||||| ||||||||||||| ||||||||||||||| |||||||||||||| ||||||||
Sbjct: 9112378 tcgataaggcatgaggttcaatatcataacagtttcttcgtagtaacgccaacgaatctc 9112319

                                                                           
Query: 301     gtcaagaactctttgtgctttgaaaacagacatagggatacgtttttgtgctttgaaaac 360
                || |||||||||||| |||||||||| |||||  |||| ||||||||||||||||||||
Sbjct: 9112318 atccagaactctttgtactttgaaaacggacatgtggatgcgtttttgtgctttgaaaac 9112259

                                                                           
Query: 361     tctctcgaacttaagtagacgatcggttggaactttccttgcgagtttccttagcccact 420
                |  |||||||||||||||||||||||||| ||||| |||||||||||||||||||||||
Sbjct: 9112258 ccgttcgaacttaagtagacgatcggttggtacttttcttgcgagtttccttagcccact 9112199

                                                                           
Query: 421     tttcttcttctttatcctagggatatactttactagtttgaaacttgtcataaataagtt 480
                ||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| |
Sbjct: 9112198 cttcttcttctttatcctaggggtatactttaccagtttgaaacttgtcataaataaggt 9112139

                               
Query: 481     tattccccgcctacct 496
               |||||||||| |||||
Sbjct: 9112138 tattccccgcttacct 9112123



 Score =  176 bits (89), Expect = 6e-41
 Identities = 107/113 (94%)
 Strand = Plus / Plus

                                                                            
Query: 528      aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 587
                ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 23629454 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 23629513

                                                                     
Query: 588      aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccata 640
                ||||||| ||||||||||| || |||||||| |||||||||||||||||||||
Sbjct: 23629514 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccata 23629566



 Score =  176 bits (89), Expect = 6e-41
 Identities = 107/113 (94%)
 Strand = Plus / Plus

                                                                           
Query: 528     aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 587
               ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 9213052 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 9213111

                                                                    
Query: 588     aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccata 640
               ||||||| ||||||||||| || |||||||| |||||||||||||||||||||
Sbjct: 9213112 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccata 9213164



 Score =  176 bits (89), Expect = 6e-41
 Identities = 107/113 (94%)
 Strand = Plus / Minus

                                                                           
Query: 528     aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 587
               ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 9189052 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 9188993

                                                                    
Query: 588     aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccata 640
               ||||||| ||||||||||| || |||||||| |||||||||||||||||||||
Sbjct: 9188992 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccata 9188940



 Score =  176 bits (89), Expect = 6e-41
 Identities = 107/113 (94%)
 Strand = Plus / Minus

                                                                           
Query: 528     aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 587
               ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 9112099 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 9112040

                                                                    
Query: 588     aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccata 640
               ||||||| ||||||||||| || |||||||| |||||||||||||||||||||
Sbjct: 9112039 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccata 9111987



 Score =  176 bits (89), Expect = 6e-41
 Identities = 107/113 (94%)
 Strand = Plus / Plus

                                                                           
Query: 528     aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 587
               ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 9095210 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 9095269

                                                                    
Query: 588     aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccata 640
               ||||||| ||||||||||| || |||||||| |||||||||||||||||||||
Sbjct: 9095270 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccata 9095322



 Score =  141 bits (71), Expect = 3e-30
 Identities = 86/91 (94%)
 Strand = Plus / Minus

                                                                            
Query: 210      aataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatcataa 269
                ||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||
Sbjct: 11711485 aataaaccaactttaagatgggataagatgctcgatatggcatgaggttcaatatcataa 11711426

                                               
Query: 270      cagtttcctcgtagtaacgccaccgaatctc 300
                 |||||| |||||||||||||| ||||||||
Sbjct: 11711425 tagtttcttcgtagtaacgccaacgaatctc 11711395



 Score = 44.1 bits (22), Expect = 0.56
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                              
Query: 171      tgtcgaaatccctataatgagttgcatttg 200
                ||||||||||| |||||||||| |||||||
Sbjct: 18621596 tgtcgaaatccatataatgagtagcatttg 18621567



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 528      aatctttctattcagaattcagtta 552
                ||||||||||||| |||||||||||
Sbjct: 21201144 aatctttctattctgaattcagtta 21201168



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                                
Query: 587     taactcgtaaaatgccgagtaggcacgaattct 619
               |||||||| ||||||||||| || |||||||||
Sbjct: 2074046 taactcgtgaaatgccgagttggtacgaattct 2074014

---

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score =  674 bits (340), Expect = 0.0
 Identities = 455/496 (91%)
 Strand = Plus / Minus

                                                                           
Query: 1       aatcttagatggatctaaaggttatttagatttctttactatatttagtacaattgttat 60
               |||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||
Sbjct: 9256961 aatcttagatggatctaaagattatttcgatttctttactatatttagtacaattgttat 9256902

                                                                           
Query: 61      atgacacatgcnnnnnnnnatagggaaactacgtcctcgagctcgaggtctgaatttctt 120
               ||||||||||         || ||  |||||||||||||||| |||||||||||||| ||
Sbjct: 9256901 atgacacatggttttttttatgggagaactacgtcctcgagcccgaggtctgaatttatt 9256842

                                                                           
Query: 121     cataatagtactcctactgacttcggctttagtaatgaataaattcgctttgtcgaaatc 180
               ||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||
Sbjct: 9256841 cataatagtactcctactgacttcggctttagtgatgaataaatttgctttgtcgaaatc 9256782

                                                                           
Query: 181     cctataatgagttgcatttgcggctgccgaataaaccaactttaagatgggataagatgc 240
               |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 9256781 cctataatgagtagcatttgctgctgccgaataaaccaactttaagatgggataagatgc 9256722

                                                                           
Query: 241     tcgatagggcatgaggttcagtatcataacagtttcctcgtagtaacgccaccgaatctc 300
               |||||| ||||||||||||| ||||||||||||||| |||||||||||||| ||||||||
Sbjct: 9256721 tcgataaggcatgaggttcaatatcataacagtttcttcgtagtaacgccaacgaatctc 9256662

                                                                           
Query: 301     gtcaagaactctttgtgctttgaaaacagacatagggatacgtttttgtgctttgaaaac 360
                || |||||||||||| |||||||||| |||||  |||| ||||||||||||||||||||
Sbjct: 9256661 atccagaactctttgtactttgaaaacggacatgtggatgcgtttttgtgctttgaaaac 9256602

                                                                           
Query: 361     tctctcgaacttaagtagacgatcggttggaactttccttgcgagtttccttagcccact 420
                |  |||||||||||||||||||||||||| ||||| |||||||||||||||||||||||
Sbjct: 9256601 ccgttcgaacttaagtagacgatcggttggtacttttcttgcgagtttccttagcccact 9256542

                                                                           
Query: 421     tttcttcttctttatcctagggatatactttactagtttgaaacttgtcataaataagtt 480
                ||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| |
Sbjct: 9256541 cttcttcttctttatcctaggggtatactttaccagtttgaaacttgtcataaataaggt 9256482

                               
Query: 481     tattccccgcctacct 496
               |||||||||| |||||
Sbjct: 9256481 tattccccgcttacct 9256466



 Score =  176 bits (89), Expect = 6e-41
 Identities = 107/113 (94%)
 Strand = Plus / Plus

                                                                            
Query: 528      aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 587
                ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 22318512 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 22318571

                                                                     
Query: 588      aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccata 640
                ||||||| ||||||||||| || |||||||| |||||||||||||||||||||
Sbjct: 22318572 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccata 22318624



 Score =  176 bits (89), Expect = 6e-41
 Identities = 107/113 (94%)
 Strand = Plus / Minus

                                                                           
Query: 528     aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 587
               ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 9256444 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 9256385

                                                                    
Query: 588     aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccata 640
               ||||||| ||||||||||| || |||||||| |||||||||||||||||||||
Sbjct: 9256384 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccata 9256332



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                             
Query: 612      cgaattctcccaatttgcgacctaccata 640
                ||||||| ||||||||||||||| |||||
Sbjct: 21499813 cgaattcccccaatttgcgacctgccata 21499785

---

>dbj|AP005161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBa0036E18
          Length = 141148

 Score =  674 bits (340), Expect = 0.0
 Identities = 455/496 (91%)
 Strand = Plus / Minus

                                                                         
Query: 1     aatcttagatggatctaaaggttatttagatttctttactatatttagtacaattgttat 60
             |||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||
Sbjct: 68174 aatcttagatggatctaaagattatttcgatttctttactatatttagtacaattgttat 68115

                                                                         
Query: 61    atgacacatgcnnnnnnnnatagggaaactacgtcctcgagctcgaggtctgaatttctt 120
             ||||||||||         || ||  |||||||||||||||| |||||||||||||| ||
Sbjct: 68114 atgacacatggttttttttatgggagaactacgtcctcgagcccgaggtctgaatttatt 68055

                                                                         
Query: 121   cataatagtactcctactgacttcggctttagtaatgaataaattcgctttgtcgaaatc 180
             ||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||
Sbjct: 68054 cataatagtactcctactgacttcggctttagtgatgaataaatttgctttgtcgaaatc 67995

                                                                         
Query: 181   cctataatgagttgcatttgcggctgccgaataaaccaactttaagatgggataagatgc 240
             |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 67994 cctataatgagtagcatttgctgctgccgaataaaccaactttaagatgggataagatgc 67935

                                                                         
Query: 241   tcgatagggcatgaggttcagtatcataacagtttcctcgtagtaacgccaccgaatctc 300
             |||||| ||||||||||||| ||||||||||||||| |||||||||||||| ||||||||
Sbjct: 67934 tcgataaggcatgaggttcaatatcataacagtttcttcgtagtaacgccaacgaatctc 67875

                                                                         
Query: 301   gtcaagaactctttgtgctttgaaaacagacatagggatacgtttttgtgctttgaaaac 360
              || |||||||||||| |||||||||| |||||  |||| ||||||||||||||||||||
Sbjct: 67874 atccagaactctttgtactttgaaaacggacatgtggatgcgtttttgtgctttgaaaac 67815

                                                                         
Query: 361   tctctcgaacttaagtagacgatcggttggaactttccttgcgagtttccttagcccact 420
              |  |||||||||||||||||||||||||| ||||| |||||||||||||||||||||||
Sbjct: 67814 ccgttcgaacttaagtagacgatcggttggtacttttcttgcgagtttccttagcccact 67755

                                                                         
Query: 421   tttcttcttctttatcctagggatatactttactagtttgaaacttgtcataaataagtt 480
              ||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| |
Sbjct: 67754 cttcttcttctttatcctaggggtatactttaccagtttgaaacttgtcataaataaggt 67695

                             
Query: 481   tattccccgcctacct 496
             |||||||||| |||||
Sbjct: 67694 tattccccgcttacct 67679



 Score =  176 bits (89), Expect = 6e-41
 Identities = 107/113 (94%)
 Strand = Plus / Minus

                                                                         
Query: 528   aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 587
             ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 67657 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 67598

                                                                  
Query: 588   aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccata 640
             ||||||| ||||||||||| || |||||||| |||||||||||||||||||||
Sbjct: 67597 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccata 67545

---

>dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome
          Length = 134494

 Score =  674 bits (340), Expect = 0.0
 Identities = 455/496 (91%)
 Strand = Plus / Plus

                                                                         
Query: 1     aatcttagatggatctaaaggttatttagatttctttactatatttagtacaattgttat 60
             |||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||
Sbjct: 80050 aatcttagatggatctaaagattatttcgatttctttactatatttagtacaattgttat 80109

                                                                         
Query: 61    atgacacatgcnnnnnnnnatagggaaactacgtcctcgagctcgaggtctgaatttctt 120
             ||||||||||         || ||  |||||||||||||||| |||||||||||||| ||
Sbjct: 80110 atgacacatggttttttttatgggagaactacgtcctcgagcccgaggtctgaatttatt 80169

                                                                         
Query: 121   cataatagtactcctactgacttcggctttagtaatgaataaattcgctttgtcgaaatc 180
             ||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||
Sbjct: 80170 cataatagtactcctactgacttcggctttagtgatgaataaatttgctttgtcgaaatc 80229

                                                                         
Query: 181   cctataatgagttgcatttgcggctgccgaataaaccaactttaagatgggataagatgc 240
             |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 80230 cctataatgagtagcatttgctgctgccgaataaaccaactttaagatgggataagatgc 80289

                                                                         
Query: 241   tcgatagggcatgaggttcagtatcataacagtttcctcgtagtaacgccaccgaatctc 300
             |||||| ||||||||||||| ||||||||||||||| |||||||||||||| ||||||||
Sbjct: 80290 tcgataaggcatgaggttcaatatcataacagtttcttcgtagtaacgccaacgaatctc 80349

                                                                         
Query: 301   gtcaagaactctttgtgctttgaaaacagacatagggatacgtttttgtgctttgaaaac 360
              || |||||||||||| |||||||||| |||||  |||| ||||||||||||||||||||
Sbjct: 80350 atccagaactctttgtactttgaaaacggacatgtggatgcgtttttgtgctttgaaaac 80409

                                                                         
Query: 361   tctctcgaacttaagtagacgatcggttggaactttccttgcgagtttccttagcccact 420
              |  |||||||||||||||||||||||||| ||||| |||||||||||||||||||||||
Sbjct: 80410 ccgttcgaacttaagtagacgatcggttggtacttttcttgcgagtttccttagcccact 80469

                                                                         
Query: 421   tttcttcttctttatcctagggatatactttactagtttgaaacttgtcataaataagtt 480
              ||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| |
Sbjct: 80470 cttcttcttctttatcctaggggtatactttaccagtttgaaacttgtcataaataaggt 80529

                             
Query: 481   tattccccgcctacct 496
             |||||||||| |||||
Sbjct: 80530 tattccccgcttacct 80545



 Score =  176 bits (89), Expect = 6e-41
 Identities = 107/113 (94%)
 Strand = Plus / Minus

                                                                          
Query: 528    aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 587
              ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 134471 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 134412

                                                                   
Query: 588    aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccata 640
              ||||||| ||||||||||| || |||||||| |||||||||||||||||||||
Sbjct: 134411 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccata 134359



 Score =  176 bits (89), Expect = 6e-41
 Identities = 107/113 (94%)
 Strand = Plus / Plus

                                                                         
Query: 528   aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 587
             ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 80568 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 80627

                                                                  
Query: 588   aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccata 640
             ||||||| ||||||||||| || |||||||| |||||||||||||||||||||
Sbjct: 80628 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccata 80680

---

>ref|XM_479425.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2380

 Score =  666 bits (336), Expect = 0.0
 Identities = 454/496 (91%)
 Strand = Plus / Minus

                                                                       
Query: 1   aatcttagatggatctaaaggttatttagatttctttactatatttagtacaattgttat 60
           |||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||
Sbjct: 713 aatcttagatggatctaaagattatttcgatttctttactatatttagtacaattgttat 654

                                                                       
Query: 61  atgacacatgcnnnnnnnnatagggaaactacgtcctcgagctcgaggtctgaatttctt 120
           ||||||||||         || ||  |||||||||||||||| |||||||||||||| ||
Sbjct: 653 atgacacatggttttttttatgggagaactacgtcctcgagcccgaggtctgaatttatt 594

                                                                       
Query: 121 cataatagtactcctactgacttcggctttagtaatgaataaattcgctttgtcgaaatc 180
           ||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||
Sbjct: 593 cataatagtactcctactgacttcggctttagtgatgaataaatttgctttgtcgaaatc 534

                                                                       
Query: 181 cctataatgagttgcatttgcggctgccgaataaaccaactttaagatgggataagatgc 240
           |||||||||||| |||||||| |||||||||||||||||||||||||| |||||||||||
Sbjct: 533 cctataatgagtagcatttgctgctgccgaataaaccaactttaagataggataagatgc 474

                                                                       
Query: 241 tcgatagggcatgaggttcagtatcataacagtttcctcgtagtaacgccaccgaatctc 300
           |||||| ||||||||||||| ||||||||||||||| |||||||||||||| ||||||||
Sbjct: 473 tcgataaggcatgaggttcaatatcataacagtttcttcgtagtaacgccaacgaatctc 414

                                                                       
Query: 301 gtcaagaactctttgtgctttgaaaacagacatagggatacgtttttgtgctttgaaaac 360
            || |||||||||||| |||||||||| |||||  |||| ||||||||||||||||||||
Sbjct: 413 atccagaactctttgtactttgaaaacggacatgtggatgcgtttttgtgctttgaaaac 354

                                                                       
Query: 361 tctctcgaacttaagtagacgatcggttggaactttccttgcgagtttccttagcccact 420
            |  |||||||||||||||||||||||||| ||||| |||||||||||||||||||||||
Sbjct: 353 ccgttcgaacttaagtagacgatcggttggtacttttcttgcgagtttccttagcccact 294

                                                                       
Query: 421 tttcttcttctttatcctagggatatactttactagtttgaaacttgtcataaataagtt 480
            ||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| |
Sbjct: 293 cttcttcttctttatcctaggggtatactttaccagtttgaaacttgtcataaataaggt 234

                           
Query: 481 tattccccgcctacct 496
           |||||||||| |||||
Sbjct: 233 tattccccgcttacct 218



 Score =  168 bits (85), Expect = 1e-38
 Identities = 106/113 (93%)
 Strand = Plus / Minus

                                                                       
Query: 528 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 587
           ||||||||||||| |||||||||||||||||||||||||||||||||||| || ||||||
Sbjct: 197 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttacactttcat 138

                                                                
Query: 588 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccata 640
           ||||||| ||||||||||| || |||||||| |||||||||||||||||||||
Sbjct: 137 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccata 85

---

>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score =  666 bits (336), Expect = 0.0
 Identities = 454/496 (91%)
 Strand = Plus / Minus

                                                                            
Query: 1        aatcttagatggatctaaaggttatttagatttctttactatatttagtacaattgttat 60
                |||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||
Sbjct: 14453590 aatcttagatggatctaaagattatttcgatttctttactatatttagtacaattgttat 14453531

                                                                            
Query: 61       atgacacatgcnnnnnnnnatagggaaactacgtcctcgagctcgaggtctgaatttctt 120
                ||||||||||         || ||  |||||||||||||||| |||||||||||||| ||
Sbjct: 14453530 atgacacatggttttttttatgggagaactacgtcctcgagcccgaggtctgaatttatt 14453471

                                                                            
Query: 121      cataatagtactcctactgacttcggctttagtaatgaataaattcgctttgtcgaaatc 180
                ||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||
Sbjct: 14453470 cataatagtactcctactgacttcggctttagtgatgaataaatttgctttgtcgaaatc 14453411

                                                                            
Query: 181      cctataatgagttgcatttgcggctgccgaataaaccaactttaagatgggataagatgc 240
                |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 14453410 cctataatgagtagcatttgctgctgccgaataaaccaactttaagatgggataagatgc 14453351

                                                                            
Query: 241      tcgatagggcatgaggttcagtatcataacagtttcctcgtagtaacgccaccgaatctc 300
                |||||| ||||||||||||| ||||||||||||||| |||||||||||||| ||||||||
Sbjct: 14453350 tcgataaggcatgaggttcaatatcataacagtttcttcgtagtaacgccaacgaatctc 14453291

                                                                            
Query: 301      gtcaagaactctttgtgctttgaaaacagacatagggatacgtttttgtgctttgaaaac 360
                 || |||||||||||| |||||||||| |||||  |||| ||||||||||||||||||||
Sbjct: 14453290 atccagaactctttgtactttgaaaacggacatgtggatgcgtttttgtgctttgaaaac 14453231

                                                                            
Query: 361      tctctcgaacttaagtagacgatcggttggaactttccttgcgagtttccttagcccact 420
                 |  |||||||||||||||||||| ||||| ||||| |||||||||||||||||||||||
Sbjct: 14453230 ccgttcgaacttaagtagacgatcagttggtacttttcttgcgagtttccttagcccact 14453171

                                                                            
Query: 421      tttcttcttctttatcctagggatatactttactagtttgaaacttgtcataaataagtt 480
                 ||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| |
Sbjct: 14453170 cttcttcttctttatcctaggggtatactttaccagtttgaaacttgtcataaataaggt 14453111

                                
Query: 481      tattccccgcctacct 496
                |||||||||| |||||
Sbjct: 14453110 tattccccgcttacct 14453095



 Score =  539 bits (272), Expect = e-150
 Identities = 376/410 (91%), Gaps = 3/410 (0%)
 Strand = Plus / Minus

                                                                            
Query: 87       aactacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcgg 146
                |||||||||||||||| |||||||||||||| ||||||||||||||   |||||||||||
Sbjct: 11893711 aactacgtcctcgagcccgaggtctgaatttattcataatagtact---actgacttcgg 11893655

                                                                            
Query: 147      ctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggctg 206
                ||||||| ||||||||||| |||||||||||||||||||||||||| |||||||| ||| 
Sbjct: 11893654 ctttagtgatgaataaatttgctttgtcgaaatccctataatgagtagcatttgctgcta 11893595

                                                                            
Query: 207      ccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatca 266
                |||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||
Sbjct: 11893594 ccgaataaaccaactttaagatgggataagatgctcgataaggcatgaggttcaatatca 11893535

                                                                            
Query: 267      taacagtttcctcgtagtaacgccaccgaatctcgtcaagaactctttgtgctttgaaaa 326
                |||||||||| |||||||||||||| |||||||| || |||||||||||| |||||||||
Sbjct: 11893534 taacagtttcttcgtagtaacgccaacgaatctcatccagaactctttgtactttgaaaa 11893475

                                                                            
Query: 327      cagacatagggatacgtttttgtgctttgaaaactctctcgaacttaagtagacgatcgg 386
                | |||||  |||| |||||||||||||||||||| |  ||||||||||||||| ||||||
Sbjct: 11893474 cggacatgtggatgcgtttttgtgctttgaaaacccgttcgaacttaagtagatgatcgg 11893415

                                                                            
Query: 387      ttggaactttccttgcgagtttccttagcccacttttcttcttctttatcctagggatat 446
                |||| ||||| ||||||||||||||||||||||| |||||||||||||||| |||| |||
Sbjct: 11893414 ttggtacttttcttgcgagtttccttagcccactcttcttcttctttatcccaggggtat 11893355

                                                                  
Query: 447      actttactagtttgaaacttgtcataaataagtttattccccgcctacct 496
                ||||||| |||||||||||||| ||||||||| ||||||||||| |||||
Sbjct: 11893354 actttaccagtttgaaacttgttataaataaggttattccccgcttacct 11893305



 Score =  176 bits (89), Expect = 6e-41
 Identities = 107/113 (94%)
 Strand = Plus / Minus

                                                                            
Query: 528      aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 587
                ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 14453073 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 14453014

                                                                     
Query: 588      aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccata 640
                ||||||| ||||||||||| || |||||||| |||||||||||||||||||||
Sbjct: 14453013 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccata 14452961



 Score =  176 bits (89), Expect = 6e-41
 Identities = 107/113 (94%)
 Strand = Plus / Minus

                                                                            
Query: 528      aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 587
                ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 11893284 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 11893225

                                                                     
Query: 588      aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccata 640
                ||||||| ||||||||||| || |||||||| |||||||||||||||||||||
Sbjct: 11893224 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccata 11893172



 Score =  123 bits (62), Expect = 8e-25
 Identities = 68/70 (97%)
 Strand = Plus / Minus

                                                                            
Query: 1        aatcttagatggatctaaaggttatttagatttctttactatatttagtacaattgttat 60
                |||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||
Sbjct: 11893798 aatcttagatggatctaaagattatttcgatttctttactatatttagtacaattgttat 11893739

                          
Query: 61       atgacacatg 70
                ||||||||||
Sbjct: 11893738 atgacacatg 11893729

---

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score =  666 bits (336), Expect = 0.0
 Identities = 454/496 (91%)
 Strand = Plus / Plus

                                                                            
Query: 1        aatcttagatggatctaaaggttatttagatttctttactatatttagtacaattgttat 60
                |||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||
Sbjct: 27925583 aatcttagatggatctaaagattatttcgatttctttactatatttagtacaattgttat 27925642

                                                                            
Query: 61       atgacacatgcnnnnnnnnatagggaaactacgtcctcgagctcgaggtctgaatttctt 120
                ||||||||||         || ||  |||||||||||||||| |||||||||||||| ||
Sbjct: 27925643 atgacacatggttttttttatgggagaactacgtcctcgagcccgaggtctgaatttatt 27925702

                                                                            
Query: 121      cataatagtactcctactgacttcggctttagtaatgaataaattcgctttgtcgaaatc 180
                ||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||
Sbjct: 27925703 cataatagtactcctactgacttcggctttagtgatgaataaatttgctttgtcgaaatc 27925762

                                                                            
Query: 181      cctataatgagttgcatttgcggctgccgaataaaccaactttaagatgggataagatgc 240
                |||||||||||| |||||||| |||||||||||||||||||||||||| |||||||||||
Sbjct: 27925763 cctataatgagtagcatttgctgctgccgaataaaccaactttaagataggataagatgc 27925822

                                                                            
Query: 241      tcgatagggcatgaggttcagtatcataacagtttcctcgtagtaacgccaccgaatctc 300
                |||||| ||||||||||||| ||||||||||||||| |||||||||||||| ||||||||
Sbjct: 27925823 tcgataaggcatgaggttcaatatcataacagtttcttcgtagtaacgccaacgaatctc 27925882

                                                                            
Query: 301      gtcaagaactctttgtgctttgaaaacagacatagggatacgtttttgtgctttgaaaac 360
                 || |||||||||||| |||||||||| |||||  |||| ||||||||||||||||||||
Sbjct: 27925883 atccagaactctttgtactttgaaaacggacatgtggatgcgtttttgtgctttgaaaac 27925942

                                                                            
Query: 361      tctctcgaacttaagtagacgatcggttggaactttccttgcgagtttccttagcccact 420
                 |  |||||||||||||||||||||||||| ||||| |||||||||||||||||||||||
Sbjct: 27925943 ccgttcgaacttaagtagacgatcggttggtacttttcttgcgagtttccttagcccact 27926002

                                                                            
Query: 421      tttcttcttctttatcctagggatatactttactagtttgaaacttgtcataaataagtt 480
                 ||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| |
Sbjct: 27926003 cttcttcttctttatcctaggggtatactttaccagtttgaaacttgtcataaataaggt 27926062

                                
Query: 481      tattccccgcctacct 496
                |||||||||| |||||
Sbjct: 27926063 tattccccgcttacct 27926078



 Score =  176 bits (89), Expect = 6e-41
 Identities = 107/113 (94%)
 Strand = Plus / Minus

                                                                            
Query: 528      aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 587
                ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 14191145 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 14191086

                                                                     
Query: 588      aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccata 640
                ||||||| ||||||||||| || |||||||| |||||||||||||||||||||
Sbjct: 14191085 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccata 14191033



 Score =  168 bits (85), Expect = 1e-38
 Identities = 106/113 (93%)
 Strand = Plus / Plus

                                                                            
Query: 528      aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 587
                ||||||||||||| |||||||||||||||||||||||||||||||||||| || ||||||
Sbjct: 27926099 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttacactttcat 27926158

                                                                     
Query: 588      aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccata 640
                ||||||| ||||||||||| || |||||||| |||||||||||||||||||||
Sbjct: 27926159 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccata 27926211



 Score = 93.7 bits (47), Expect = 7e-16
 Identities = 62/67 (92%)
 Strand = Plus / Minus

                                                                            
Query: 155      atgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggctgccgaataa 214
                ||||||||||| |||||||||||||||||||||||||| | |||||| | ||||||||||
Sbjct: 10159884 atgaataaatttgctttgtcgaaatccctataatgagtagtatttgctgttgccgaataa 10159825

                       
Query: 215      accaact 221
                |||||||
Sbjct: 10159824 accaact 10159818



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 96/114 (84%), Gaps = 9/114 (7%)
 Strand = Plus / Minus

                                                                            
Query: 248      ggcatgaggttcagtatcataacagtttcctcgtagtaacgccaccgaatctcgtcaaga 307
                ||||||||||||||||||||||  ||||| ||||||||||||      ||||| | ||||
Sbjct: 10159803 ggcatgaggttcagtatcataatggtttcttcgtagtaacgc------atctcatgaaga 10159750

                                                                      
Query: 308      actc-tttgtgctttgaaaacagacatagggatacgtttttgtgctttgaaaac 360
                |||| ||||| |||||||||| |||||  ||||  |||||||||||||||||||
Sbjct: 10159749 actcttttgtactttgaaaacggacat--ggatgtgtttttgtgctttgaaaac 10159698

---

>dbj|AP005452.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0453E03
          Length = 159980

 Score =  666 bits (336), Expect = 0.0
 Identities = 454/496 (91%)
 Strand = Plus / Plus

                                                                         
Query: 1     aatcttagatggatctaaaggttatttagatttctttactatatttagtacaattgttat 60
             |||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||
Sbjct: 88941 aatcttagatggatctaaagattatttcgatttctttactatatttagtacaattgttat 89000

                                                                         
Query: 61    atgacacatgcnnnnnnnnatagggaaactacgtcctcgagctcgaggtctgaatttctt 120
             ||||||||||         || ||  |||||||||||||||| |||||||||||||| ||
Sbjct: 89001 atgacacatggttttttttatgggagaactacgtcctcgagcccgaggtctgaatttatt 89060

                                                                         
Query: 121   cataatagtactcctactgacttcggctttagtaatgaataaattcgctttgtcgaaatc 180
             ||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||
Sbjct: 89061 cataatagtactcctactgacttcggctttagtgatgaataaatttgctttgtcgaaatc 89120

                                                                         
Query: 181   cctataatgagttgcatttgcggctgccgaataaaccaactttaagatgggataagatgc 240
             |||||||||||| |||||||| |||||||||||||||||||||||||| |||||||||||
Sbjct: 89121 cctataatgagtagcatttgctgctgccgaataaaccaactttaagataggataagatgc 89180

                                                                         
Query: 241   tcgatagggcatgaggttcagtatcataacagtttcctcgtagtaacgccaccgaatctc 300
             |||||| ||||||||||||| ||||||||||||||| |||||||||||||| ||||||||
Sbjct: 89181 tcgataaggcatgaggttcaatatcataacagtttcttcgtagtaacgccaacgaatctc 89240

                                                                         
Query: 301   gtcaagaactctttgtgctttgaaaacagacatagggatacgtttttgtgctttgaaaac 360
              || |||||||||||| |||||||||| |||||  |||| ||||||||||||||||||||
Sbjct: 89241 atccagaactctttgtactttgaaaacggacatgtggatgcgtttttgtgctttgaaaac 89300

                                                                         
Query: 361   tctctcgaacttaagtagacgatcggttggaactttccttgcgagtttccttagcccact 420
              |  |||||||||||||||||||||||||| ||||| |||||||||||||||||||||||
Sbjct: 89301 ccgttcgaacttaagtagacgatcggttggtacttttcttgcgagtttccttagcccact 89360

                                                                         
Query: 421   tttcttcttctttatcctagggatatactttactagtttgaaacttgtcataaataagtt 480
              ||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| |
Sbjct: 89361 cttcttcttctttatcctaggggtatactttaccagtttgaaacttgtcataaataaggt 89420

                             
Query: 481   tattccccgcctacct 496
             |||||||||| |||||
Sbjct: 89421 tattccccgcttacct 89436



 Score =  168 bits (85), Expect = 1e-38
 Identities = 106/113 (93%)
 Strand = Plus / Plus

                                                                         
Query: 528   aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 587
             ||||||||||||| |||||||||||||||||||||||||||||||||||| || ||||||
Sbjct: 89457 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttacactttcat 89516

                                                                  
Query: 588   aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccata 640
             ||||||| ||||||||||| || |||||||| |||||||||||||||||||||
Sbjct: 89517 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccata 89569

---

>dbj|AP003825.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1343_D04
          Length = 143407

 Score =  666 bits (336), Expect = 0.0
 Identities = 454/496 (91%)
 Strand = Plus / Plus

                                                                         
Query: 1     aatcttagatggatctaaaggttatttagatttctttactatatttagtacaattgttat 60
             |||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||
Sbjct: 14917 aatcttagatggatctaaagattatttcgatttctttactatatttagtacaattgttat 14976

                                                                         
Query: 61    atgacacatgcnnnnnnnnatagggaaactacgtcctcgagctcgaggtctgaatttctt 120
             ||||||||||         || ||  |||||||||||||||| |||||||||||||| ||
Sbjct: 14977 atgacacatggttttttttatgggagaactacgtcctcgagcccgaggtctgaatttatt 15036

                                                                         
Query: 121   cataatagtactcctactgacttcggctttagtaatgaataaattcgctttgtcgaaatc 180
             ||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||
Sbjct: 15037 cataatagtactcctactgacttcggctttagtgatgaataaatttgctttgtcgaaatc 15096

                                                                         
Query: 181   cctataatgagttgcatttgcggctgccgaataaaccaactttaagatgggataagatgc 240
             |||||||||||| |||||||| |||||||||||||||||||||||||| |||||||||||
Sbjct: 15097 cctataatgagtagcatttgctgctgccgaataaaccaactttaagataggataagatgc 15156

                                                                         
Query: 241   tcgatagggcatgaggttcagtatcataacagtttcctcgtagtaacgccaccgaatctc 300
             |||||| ||||||||||||| ||||||||||||||| |||||||||||||| ||||||||
Sbjct: 15157 tcgataaggcatgaggttcaatatcataacagtttcttcgtagtaacgccaacgaatctc 15216

                                                                         
Query: 301   gtcaagaactctttgtgctttgaaaacagacatagggatacgtttttgtgctttgaaaac 360
              || |||||||||||| |||||||||| |||||  |||| ||||||||||||||||||||
Sbjct: 15217 atccagaactctttgtactttgaaaacggacatgtggatgcgtttttgtgctttgaaaac 15276

                                                                         
Query: 361   tctctcgaacttaagtagacgatcggttggaactttccttgcgagtttccttagcccact 420
              |  |||||||||||||||||||||||||| ||||| |||||||||||||||||||||||
Sbjct: 15277 ccgttcgaacttaagtagacgatcggttggtacttttcttgcgagtttccttagcccact 15336

                                                                         
Query: 421   tttcttcttctttatcctagggatatactttactagtttgaaacttgtcataaataagtt 480
              ||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| |
Sbjct: 15337 cttcttcttctttatcctaggggtatactttaccagtttgaaacttgtcataaataaggt 15396

                             
Query: 481   tattccccgcctacct 496
             |||||||||| |||||
Sbjct: 15397 tattccccgcttacct 15412



 Score =  168 bits (85), Expect = 1e-38
 Identities = 106/113 (93%)
 Strand = Plus / Plus

                                                                         
Query: 528   aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 587
             ||||||||||||| |||||||||||||||||||||||||||||||||||| || ||||||
Sbjct: 15433 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttacactttcat 15492

                                                                  
Query: 588   aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccata 640
             ||||||| ||||||||||| || |||||||| |||||||||||||||||||||
Sbjct: 15493 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccata 15545

---

>dbj|AP005707.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
              clone:P0465E03
          Length = 151206

 Score =  666 bits (336), Expect = 0.0
 Identities = 454/496 (91%)
 Strand = Plus / Minus

                                                                          
Query: 1      aatcttagatggatctaaaggttatttagatttctttactatatttagtacaattgttat 60
              |||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||
Sbjct: 145393 aatcttagatggatctaaagattatttcgatttctttactatatttagtacaattgttat 145334

                                                                          
Query: 61     atgacacatgcnnnnnnnnatagggaaactacgtcctcgagctcgaggtctgaatttctt 120
              ||||||||||         || ||  |||||||||||||||| |||||||||||||| ||
Sbjct: 145333 atgacacatggttttttttatgggagaactacgtcctcgagcccgaggtctgaatttatt 145274

                                                                          
Query: 121    cataatagtactcctactgacttcggctttagtaatgaataaattcgctttgtcgaaatc 180
              ||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||
Sbjct: 145273 cataatagtactcctactgacttcggctttagtgatgaataaatttgctttgtcgaaatc 145214

                                                                          
Query: 181    cctataatgagttgcatttgcggctgccgaataaaccaactttaagatgggataagatgc 240
              |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 145213 cctataatgagtagcatttgctgctgccgaataaaccaactttaagatgggataagatgc 145154

                                                                          
Query: 241    tcgatagggcatgaggttcagtatcataacagtttcctcgtagtaacgccaccgaatctc 300
              |||||| ||||||||||||| ||||||||||||||| |||||||||||||| ||||||||
Sbjct: 145153 tcgataaggcatgaggttcaatatcataacagtttcttcgtagtaacgccaacgaatctc 145094

                                                                          
Query: 301    gtcaagaactctttgtgctttgaaaacagacatagggatacgtttttgtgctttgaaaac 360
               || |||||||||||| |||||||||| |||||  |||| ||||||||||||||||||||
Sbjct: 145093 atccagaactctttgtactttgaaaacggacatgtggatgcgtttttgtgctttgaaaac 145034

                                                                          
Query: 361    tctctcgaacttaagtagacgatcggttggaactttccttgcgagtttccttagcccact 420
               |  |||||||||||||||||||| ||||| ||||| |||||||||||||||||||||||
Sbjct: 145033 ccgttcgaacttaagtagacgatcagttggtacttttcttgcgagtttccttagcccact 144974

                                                                          
Query: 421    tttcttcttctttatcctagggatatactttactagtttgaaacttgtcataaataagtt 480
               ||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| |
Sbjct: 144973 cttcttcttctttatcctaggggtatactttaccagtttgaaacttgtcataaataaggt 144914

                              
Query: 481    tattccccgcctacct 496
              |||||||||| |||||
Sbjct: 144913 tattccccgcttacct 144898



 Score =  176 bits (89), Expect = 6e-41
 Identities = 107/113 (94%)
 Strand = Plus / Minus

                                                                          
Query: 528    aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 587
              ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 144876 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 144817

                                                                   
Query: 588    aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccata 640
              ||||||| ||||||||||| || |||||||| |||||||||||||||||||||
Sbjct: 144816 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccata 144764

---

>dbj|AP005683.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1585_D02
          Length = 103172

 Score =  666 bits (336), Expect = 0.0
 Identities = 454/496 (91%)
 Strand = Plus / Minus

                                                                         
Query: 1     aatcttagatggatctaaaggttatttagatttctttactatatttagtacaattgttat 60
             |||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||
Sbjct: 53155 aatcttagatggatctaaagattatttcgatttctttactatatttagtacaattgttat 53096

                                                                         
Query: 61    atgacacatgcnnnnnnnnatagggaaactacgtcctcgagctcgaggtctgaatttctt 120
             ||||||||||         || ||  |||||||||||||||| |||||||||||||| ||
Sbjct: 53095 atgacacatggttttttttatgggagaactacgtcctcgagcccgaggtctgaatttatt 53036

                                                                         
Query: 121   cataatagtactcctactgacttcggctttagtaatgaataaattcgctttgtcgaaatc 180
             ||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||
Sbjct: 53035 cataatagtactcctactgacttcggctttagtgatgaataaatttgctttgtcgaaatc 52976

                                                                         
Query: 181   cctataatgagttgcatttgcggctgccgaataaaccaactttaagatgggataagatgc 240
             |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 52975 cctataatgagtagcatttgctgctgccgaataaaccaactttaagatgggataagatgc 52916

                                                                         
Query: 241   tcgatagggcatgaggttcagtatcataacagtttcctcgtagtaacgccaccgaatctc 300
             |||||| ||||||||||||| ||||||||||||||| |||||||||||||| ||||||||
Sbjct: 52915 tcgataaggcatgaggttcaatatcataacagtttcttcgtagtaacgccaacgaatctc 52856

                                                                         
Query: 301   gtcaagaactctttgtgctttgaaaacagacatagggatacgtttttgtgctttgaaaac 360
              || |||||||||||| |||||||||| |||||  |||| ||||||||||||||||||||
Sbjct: 52855 atccagaactctttgtactttgaaaacggacatgtggatgcgtttttgtgctttgaaaac 52796

                                                                         
Query: 361   tctctcgaacttaagtagacgatcggttggaactttccttgcgagtttccttagcccact 420
              |  |||||||||||||||||||| ||||| ||||| |||||||||||||||||||||||
Sbjct: 52795 ccgttcgaacttaagtagacgatcagttggtacttttcttgcgagtttccttagcccact 52736

                                                                         
Query: 421   tttcttcttctttatcctagggatatactttactagtttgaaacttgtcataaataagtt 480
              ||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| |
Sbjct: 52735 cttcttcttctttatcctaggggtatactttaccagtttgaaacttgtcataaataaggt 52676

                             
Query: 481   tattccccgcctacct 496
             |||||||||| |||||
Sbjct: 52675 tattccccgcttacct 52660



 Score =  176 bits (89), Expect = 6e-41
 Identities = 107/113 (94%)
 Strand = Plus / Minus

                                                                         
Query: 528   aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 587
             ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 52638 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 52579

                                                                  
Query: 588   aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccata 640
             ||||||| ||||||||||| || |||||||| |||||||||||||||||||||
Sbjct: 52578 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccata 52526

---

>dbj|AK072149.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013128P04, full
           insert sequence
          Length = 2475

 Score =  666 bits (336), Expect = 0.0
 Identities = 454/496 (91%)
 Strand = Plus / Minus

                                                                       
Query: 1   aatcttagatggatctaaaggttatttagatttctttactatatttagtacaattgttat 60
           |||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||
Sbjct: 806 aatcttagatggatctaaagattatttcgatttctttactatatttagtacaattgttat 747

                                                                       
Query: 61  atgacacatgcnnnnnnnnatagggaaactacgtcctcgagctcgaggtctgaatttctt 120
           ||||||||||         || ||  |||||||||||||||| |||||||||||||| ||
Sbjct: 746 atgacacatggttttttttatgggagaactacgtcctcgagcccgaggtctgaatttatt 687

                                                                       
Query: 121 cataatagtactcctactgacttcggctttagtaatgaataaattcgctttgtcgaaatc 180
           ||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||
Sbjct: 686 cataatagtactcctactgacttcggctttagtgatgaataaatttgctttgtcgaaatc 627

                                                                       
Query: 181 cctataatgagttgcatttgcggctgccgaataaaccaactttaagatgggataagatgc 240
           |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 626 cctataatgagtagcatttgctgctgccgaataaaccaactttaagatgggataagatgc 567

                                                                       
Query: 241 tcgatagggcatgaggttcagtatcataacagtttcctcgtagtaacgccaccgaatctc 300
           |||||| ||||||||||||| ||||||||||||||| |||||||||||||| ||||||||
Sbjct: 566 tcgataaggcatgaggttcaatatcataacagtttcttcgtagtaacgccaacgaatctc 507

                                                                       
Query: 301 gtcaagaactctttgtgctttgaaaacagacatagggatacgtttttgtgctttgaaaac 360
            || |||||||||||| |||||||||| |||||  |||| ||||||||||||||||||||
Sbjct: 506 atccagaactctttgtactttgaaaacggacatgtggatgcgtttttgtgctttgaaaac 447

                                                                       
Query: 361 tctctcgaacttaagtagacgatcggttggaactttccttgcgagtttccttagcccact 420
            |  |||||||||||||||||||||||||| ||||| |||||||||||||||||||||||
Sbjct: 446 ccgttcgaacttaagtagacgatcggttggtacttttcttgcgagtttccttagcccact 387

                                                                       
Query: 421 tttcttcttctttatcctagggatatactttactagtttgaaacttgtcataaataagtt 480
            ||||||||| ||||||||||| |||||||||| |||||||||||||||||||||||| |
Sbjct: 386 cttcttcttccttatcctaggggtatactttaccagtttgaaacttgtcataaataaggt 327

                           
Query: 481 tattccccgcctacct 496
           |||||||||| |||||
Sbjct: 326 tattccccgcttacct 311



 Score =  176 bits (89), Expect = 6e-41
 Identities = 107/113 (94%)
 Strand = Plus / Minus

                                                                       
Query: 528 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 587
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 289 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 230

                                                                
Query: 588 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccata 640
           ||||||| ||||||||||| || |||||||| |||||||||||||||||||||
Sbjct: 229 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccata 177

---

>gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone
             OSJNAb0075K12, complete sequence
          Length = 125936

 Score =  660 bits (333), Expect = 0.0
 Identities = 455/497 (91%), Gaps = 1/497 (0%)
 Strand = Plus / Plus

                                                                         
Query: 1     aatcttagatggatctaaaggttatttagatttctttactatatttagtacaattgttat 60
             |||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||
Sbjct: 78291 aatcttagatggatctaaagattatttcgatttctttactatatttagtacaattgttat 78350

                                                                         
Query: 61    atgacacatgcnnnnnnnnatagggaaactacgtcctcgagctcgaggtctgaatttctt 120
             ||||||||||         || ||  |||||||||||||||| |||||||||||||| ||
Sbjct: 78351 atgacacatggttttttttatgggagaactacgtcctcgagcccgaggtctgaatttatt 78410

                                                                         
Query: 121   cataatagtactcctactgacttcggctttagtaatgaataaattcgctttgtcgaaatc 180
             ||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||
Sbjct: 78411 cataatagtactcctactgacttcggctttagtgatgaataaatttgctttgtcgaaatc 78470

                                                                         
Query: 181   cctataatgagttgcatttgcggctgccgaataaaccaactttaagatgggataagatgc 240
             |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 78471 cctataatgagtagcatttgctgctgccgaataaaccaactttaagatgggataagatgc 78530

                                                                         
Query: 241   tcgatagggcatgaggttcagtatcataacagtttcctcgtagtaacgccaccgaatctc 300
             |||||| ||||||||||||| ||||||||||||||| |||||||||||||| ||||||||
Sbjct: 78531 tcgataaggcatgaggttcaatatcataacagtttcttcgtagtaacgccaacgaatctc 78590

                                                                         
Query: 301   gtcaagaactc-tttgtgctttgaaaacagacatagggatacgtttttgtgctttgaaaa 359
              || ||||||| ||||| |||||||||| |||||  |||| |||||||||||||||||||
Sbjct: 78591 atccagaactcttttgtactttgaaaacggacatgtggatgcgtttttgtgctttgaaaa 78650

                                                                         
Query: 360   ctctctcgaacttaagtagacgatcggttggaactttccttgcgagtttccttagcccac 419
             | |  |||||||||||||||||||||||||| ||||| ||||||||||||||||||||||
Sbjct: 78651 cccgttcgaacttaagtagacgatcggttggtacttttcttgcgagtttccttagcccac 78710

                                                                         
Query: 420   ttttcttcttctttatcctagggatatactttactagtttgaaacttgtcataaataagt 479
             | ||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| 
Sbjct: 78711 tcttcttcttctttatcctaggggtatactttaccagtttgaaacttgtcataaataagg 78770

                              
Query: 480   ttattccccgcctacct 496
             ||||||||||| |||||
Sbjct: 78771 ttattccccgcttacct 78787



 Score =  176 bits (89), Expect = 6e-41
 Identities = 107/113 (94%)
 Strand = Plus / Plus

                                                                         
Query: 528   aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 587
             ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 78810 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 78869

                                                                  
Query: 588   aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccata 640
             ||||||| ||||||||||| || |||||||| |||||||||||||||||||||
Sbjct: 78870 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccata 78922

---

>gb|AC099402.2| Oryza sativa chromosome 10 clone OSJNBa0022D10, complete sequence
          Length = 144459

 Score =  660 bits (333), Expect = 0.0
 Identities = 455/497 (91%), Gaps = 1/497 (0%)
 Strand = Plus / Plus

                                                                         
Query: 1     aatcttagatggatctaaaggttatttagatttctttactatatttagtacaattgttat 60
             |||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||
Sbjct: 12355 aatcttagatggatctaaagattatttcgatttctttactatatttagtacaattgttat 12414

                                                                         
Query: 61    atgacacatgcnnnnnnnnatagggaaactacgtcctcgagctcgaggtctgaatttctt 120
             ||||||||||         || ||  |||||||||||||||| |||||||||||||| ||
Sbjct: 12415 atgacacatggttttttttatgggagaactacgtcctcgagcccgaggtctgaatttatt 12474

                                                                         
Query: 121   cataatagtactcctactgacttcggctttagtaatgaataaattcgctttgtcgaaatc 180
             ||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||
Sbjct: 12475 cataatagtactcctactgacttcggctttagtgatgaataaatttgctttgtcgaaatc 12534

                                                                         
Query: 181   cctataatgagttgcatttgcggctgccgaataaaccaactttaagatgggataagatgc 240
             |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 12535 cctataatgagtagcatttgctgctgccgaataaaccaactttaagatgggataagatgc 12594

                                                                         
Query: 241   tcgatagggcatgaggttcagtatcataacagtttcctcgtagtaacgccaccgaatctc 300
             |||||| ||||||||||||| ||||||||||||||| |||||||||||||| ||||||||
Sbjct: 12595 tcgataaggcatgaggttcaatatcataacagtttcttcgtagtaacgccaacgaatctc 12654

                                                                         
Query: 301   gtcaagaactc-tttgtgctttgaaaacagacatagggatacgtttttgtgctttgaaaa 359
              || ||||||| ||||| |||||||||| |||||  |||| |||||||||||||||||||
Sbjct: 12655 atccagaactcttttgtactttgaaaacggacatgtggatgcgtttttgtgctttgaaaa 12714

                                                                         
Query: 360   ctctctcgaacttaagtagacgatcggttggaactttccttgcgagtttccttagcccac 419
             | |  |||||||||||||||||||||||||| ||||| ||||||||||||||||||||||
Sbjct: 12715 cccgttcgaacttaagtagacgatcggttggtacttttcttgcgagtttccttagcccac 12774

                                                                         
Query: 420   ttttcttcttctttatcctagggatatactttactagtttgaaacttgtcataaataagt 479
             | ||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| 
Sbjct: 12775 tcttcttcttctttatcctaggggtatactttaccagtttgaaacttgtcataaataagg 12834

                              
Query: 480   ttattccccgcctacct 496
             ||||||||||| |||||
Sbjct: 12835 ttattccccgcttacct 12851



 Score =  176 bits (89), Expect = 6e-41
 Identities = 107/113 (94%)
 Strand = Plus / Plus

                                                                         
Query: 528   aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 587
             ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 12874 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 12933

                                                                  
Query: 588   aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccata 640
             ||||||| ||||||||||| || |||||||| |||||||||||||||||||||
Sbjct: 12934 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccata 12986

---

>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score =  660 bits (333), Expect = 0.0
 Identities = 455/497 (91%), Gaps = 1/497 (0%)
 Strand = Plus / Plus

                                                                            
Query: 1        aatcttagatggatctaaaggttatttagatttctttactatatttagtacaattgttat 60
                |||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||
Sbjct: 10371899 aatcttagatggatctaaagattatttcgatttctttactatatttagtacaattgttat 10371958

                                                                            
Query: 61       atgacacatgcnnnnnnnnatagggaaactacgtcctcgagctcgaggtctgaatttctt 120
                ||||||||||         || ||  |||||||||||||||| |||||||||||||| ||
Sbjct: 10371959 atgacacatggttttttttatgggagaactacgtcctcgagcccgaggtctgaatttatt 10372018

                                                                            
Query: 121      cataatagtactcctactgacttcggctttagtaatgaataaattcgctttgtcgaaatc 180
                ||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||
Sbjct: 10372019 cataatagtactcctactgacttcggctttagtgatgaataaatttgctttgtcgaaatc 10372078

                                                                            
Query: 181      cctataatgagttgcatttgcggctgccgaataaaccaactttaagatgggataagatgc 240
                |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 10372079 cctataatgagtagcatttgctgctgccgaataaaccaactttaagatgggataagatgc 10372138

                                                                            
Query: 241      tcgatagggcatgaggttcagtatcataacagtttcctcgtagtaacgccaccgaatctc 300
                |||||| ||||||||||||| ||||||||||||||| |||||||||||||| ||||||||
Sbjct: 10372139 tcgataaggcatgaggttcaatatcataacagtttcttcgtagtaacgccaacgaatctc 10372198

                                                                            
Query: 301      gtcaagaactc-tttgtgctttgaaaacagacatagggatacgtttttgtgctttgaaaa 359
                 || ||||||| ||||| |||||||||| |||||  |||| |||||||||||||||||||
Sbjct: 10372199 atccagaactcttttgtactttgaaaacggacatgtggatgcgtttttgtgctttgaaaa 10372258

                                                                            
Query: 360      ctctctcgaacttaagtagacgatcggttggaactttccttgcgagtttccttagcccac 419
                | |  |||||||||||||||||||||||||| ||||| ||||||||||||||||||||||
Sbjct: 10372259 cccgttcgaacttaagtagacgatcggttggtacttttcttgcgagtttccttagcccac 10372318

                                                                            
Query: 420      ttttcttcttctttatcctagggatatactttactagtttgaaacttgtcataaataagt 479
                | ||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| 
Sbjct: 10372319 tcttcttcttctttatcctaggggtatactttaccagtttgaaacttgtcataaataagg 10372378

                                 
Query: 480      ttattccccgcctacct 496
                ||||||||||| |||||
Sbjct: 10372379 ttattccccgcttacct 10372395



 Score =  176 bits (89), Expect = 6e-41
 Identities = 107/113 (94%)
 Strand = Plus / Plus

                                                                            
Query: 528      aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 587
                ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 20816614 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 20816673

                                                                     
Query: 588      aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccata 640
                ||||||| ||||||||||| || |||||||| |||||||||||||||||||||
Sbjct: 20816674 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccata 20816726



 Score =  176 bits (89), Expect = 6e-41
 Identities = 107/113 (94%)
 Strand = Plus / Plus

                                                                            
Query: 528      aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 587
                ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 10372418 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 10372477

                                                                     
Query: 588      aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccata 640
                ||||||| ||||||||||| || |||||||| |||||||||||||||||||||
Sbjct: 10372478 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccata 10372530



 Score =  176 bits (89), Expect = 6e-41
 Identities = 107/113 (94%)
 Strand = Plus / Minus

                                                                            
Query: 528      aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 587
                ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 10291881 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 10291822

                                                                     
Query: 588      aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccata 640
                ||||||| ||||||||||| || |||||||| |||||||||||||||||||||
Sbjct: 10291821 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccata 10291769

---

>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score =  660 bits (333), Expect = 0.0
 Identities = 455/497 (91%), Gaps = 1/497 (0%)
 Strand = Plus / Plus

                                                                            
Query: 1        aatcttagatggatctaaaggttatttagatttctttactatatttagtacaattgttat 60
                |||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||
Sbjct: 10377938 aatcttagatggatctaaagattatttcgatttctttactatatttagtacaattgttat 10377997

                                                                            
Query: 61       atgacacatgcnnnnnnnnatagggaaactacgtcctcgagctcgaggtctgaatttctt 120
                ||||||||||         || ||  |||||||||||||||| |||||||||||||| ||
Sbjct: 10377998 atgacacatggttttttttatgggagaactacgtcctcgagcccgaggtctgaatttatt 10378057

                                                                            
Query: 121      cataatagtactcctactgacttcggctttagtaatgaataaattcgctttgtcgaaatc 180
                ||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||
Sbjct: 10378058 cataatagtactcctactgacttcggctttagtgatgaataaatttgctttgtcgaaatc 10378117

                                                                            
Query: 181      cctataatgagttgcatttgcggctgccgaataaaccaactttaagatgggataagatgc 240
                |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 10378118 cctataatgagtagcatttgctgctgccgaataaaccaactttaagatgggataagatgc 10378177

                                                                            
Query: 241      tcgatagggcatgaggttcagtatcataacagtttcctcgtagtaacgccaccgaatctc 300
                |||||| ||||||||||||| ||||||||||||||| |||||||||||||| ||||||||
Sbjct: 10378178 tcgataaggcatgaggttcaatatcataacagtttcttcgtagtaacgccaacgaatctc 10378237

                                                                            
Query: 301      gtcaagaactc-tttgtgctttgaaaacagacatagggatacgtttttgtgctttgaaaa 359
                 || ||||||| ||||| |||||||||| |||||  |||| |||||||||||||||||||
Sbjct: 10378238 atccagaactcttttgtactttgaaaacggacatgtggatgcgtttttgtgctttgaaaa 10378297

                                                                            
Query: 360      ctctctcgaacttaagtagacgatcggttggaactttccttgcgagtttccttagcccac 419
                | |  |||||||||||||||||||||||||| ||||| ||||||||||||||||||||||
Sbjct: 10378298 cccgttcgaacttaagtagacgatcggttggtacttttcttgcgagtttccttagcccac 10378357

                                                                            
Query: 420      ttttcttcttctttatcctagggatatactttactagtttgaaacttgtcataaataagt 479
                | ||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| 
Sbjct: 10378358 tcttcttcttctttatcctaggggtatactttaccagtttgaaacttgtcataaataagg 10378417

                                 
Query: 480      ttattccccgcctacct 496
                ||||||||||| |||||
Sbjct: 10378418 ttattccccgcttacct 10378434



 Score =  176 bits (89), Expect = 6e-41
 Identities = 107/113 (94%)
 Strand = Plus / Plus

                                                                            
Query: 528      aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 587
                ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 20827878 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 20827937

                                                                     
Query: 588      aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccata 640
                ||||||| ||||||||||| || |||||||| |||||||||||||||||||||
Sbjct: 20827938 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccata 20827990



 Score =  176 bits (89), Expect = 6e-41
 Identities = 107/113 (94%)
 Strand = Plus / Plus

                                                                            
Query: 528      aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 587
                ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 10378457 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 10378516

                                                                     
Query: 588      aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccata 640
                ||||||| ||||||||||| || |||||||| |||||||||||||||||||||
Sbjct: 10378517 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccata 10378569



 Score =  176 bits (89), Expect = 6e-41
 Identities = 107/113 (94%)
 Strand = Plus / Minus

                                                                            
Query: 528      aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 587
                ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 10297920 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 10297861

                                                                     
Query: 588      aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccata 640
                ||||||| ||||||||||| || |||||||| |||||||||||||||||||||
Sbjct: 10297860 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccata 10297808

---

>emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome
          Length = 140384

 Score =  585 bits (295), Expect = e-164
 Identities = 390/421 (92%), Gaps = 3/421 (0%)
 Strand = Plus / Plus

                                                                         
Query: 87    aactacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcgg 146
             ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 81914 aactacgtcctcgagctcgaggtctgaattttttcataatagtactcctactgacttcgg 81973

                                                                         
Query: 147   ctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggctg 206
             ||||||| ||||||||||||| |||||||||||||||||||||||| |||||||| ||||
Sbjct: 81974 ctttagtgatgaataaattcgttttgtcgaaatccctataatgagtagcatttgctgctg 82033

                                                                         
Query: 207   ccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatca 266
             |||||||||||||||||||||||||||| ||||||||||| |||||||| ||||||||||
Sbjct: 82034 ccgaataaaccaactttaagatgggatacgatgctcgataaggcatgagattcagtatca 82093

                                                                         
Query: 267   taacagtttcctcgtagtaacgccaccgaatctcgtcaagaactctttgtgctttgaaaa 326
             |||| |||||||||||||||||||| |||||||| || ||||||||||||||||||||||
Sbjct: 82094 taacggtttcctcgtagtaacgccagcgaatctcatctagaactctttgtgctttgaaaa 82153

                                                                         
Query: 327   cagacatagggatacgtttttgtgctttgaaaactctctcgaacttaagtagacgatcgg 386
             |||||||| | || |||||||||||||||||||| |  ||||| ||||||||||||||||
Sbjct: 82154 cagacatatgtatgcgtttttgtgctttgaaaacccgttcgaatttaagtagacgatcgg 82213

                                                                         
Query: 387   ttggaactttccttgcgagtttccttagcccacttttcttcttctttatcctagggatat 446
             |||||||||| ||||||||||| || |||||    ||||||||||||||||||||| |||
Sbjct: 82214 ttggaacttttcttgcgagttttctcagccc---cttcttcttctttatcctaggggtat 82270

                                                                         
Query: 447   actttactagtttgaaacttgtcataaataagtttattccccgcctacctttactttatt 506
             ||||||| | |||||||||||||||||||||| ||||| |||||||||||||||||||||
Sbjct: 82271 actttaccaatttgaaacttgtcataaataaggttattacccgcctacctttactttatt 82330

              
Query: 507   t 507
             |
Sbjct: 82331 t 82331



 Score =  178 bits (90), Expect = 1e-41
 Identities = 111/118 (94%)
 Strand = Plus / Minus

                                                                          
Query: 523    ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 582
              |||| ||||||||||||| ||||||| ||||||||||||||||||||||||||||| | |
Sbjct: 140376 ttctgaatctttctattctgaattcaattaacgacgagatttagtatcctttcttgtact 140317

                                                                        
Query: 583    ttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccata 640
              |||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 140316 ttcataactcgtgaaatgccgagtaggcacgaattcccccaatttgcgacctaccata 140259



 Score =  178 bits (90), Expect = 1e-41
 Identities = 111/118 (94%)
 Strand = Plus / Plus

                                                                         
Query: 523   ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 582
             |||| ||||||||||||| ||||||| ||||||||||||||||||||||||||||| | |
Sbjct: 82361 ttctgaatctttctattctgaattcaattaacgacgagatttagtatcctttcttgtact 82420

                                                                       
Query: 583   ttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccata 640
             |||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 82421 ttcataactcgtgaaatgccgagtaggcacgaattcccccaatttgcgacctaccata 82478



 Score =  105 bits (53), Expect = 2e-19
 Identities = 65/69 (94%)
 Strand = Plus / Plus

                                                                         
Query: 1     aatcttagatggatctaaaggttatttagatttctttactatatttagtacaattgttat 60
             |||||||||| ||||||||| |||||| ||||||||||||||||||||||||||||||||
Sbjct: 81828 aatcttagattgatctaaagattattttgatttctttactatatttagtacaattgttat 81887

                      
Query: 61    atgacacat 69
             || ||||||
Sbjct: 81888 attacacat 81896

---

>gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome
          Length = 140454

 Score =  585 bits (295), Expect = e-164
 Identities = 390/421 (92%), Gaps = 3/421 (0%)
 Strand = Plus / Plus

                                                                         
Query: 87    aactacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcgg 146
             ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 81944 aactacgtcctcgagctcgaggtctgaattttttcataatagtactcctactgacttcgg 82003

                                                                         
Query: 147   ctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggctg 206
             ||||||| ||||||||||||| |||||||||||||||||||||||| |||||||| ||||
Sbjct: 82004 ctttagtgatgaataaattcgttttgtcgaaatccctataatgagtagcatttgctgctg 82063

                                                                         
Query: 207   ccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatca 266
             |||||||||||||||||||||||||||| ||||||||||| |||||||| ||||||||||
Sbjct: 82064 ccgaataaaccaactttaagatgggatacgatgctcgataaggcatgagattcagtatca 82123

                                                                         
Query: 267   taacagtttcctcgtagtaacgccaccgaatctcgtcaagaactctttgtgctttgaaaa 326
             |||| |||||||||||||||||||| |||||||| || ||||||||||||||||||||||
Sbjct: 82124 taacggtttcctcgtagtaacgccagcgaatctcatctagaactctttgtgctttgaaaa 82183

                                                                         
Query: 327   cagacatagggatacgtttttgtgctttgaaaactctctcgaacttaagtagacgatcgg 386
             |||||||| | || |||||||||||||||||||| |  ||||| ||||||||||||||||
Sbjct: 82184 cagacatatgtatgcgtttttgtgctttgaaaacccgttcgaatttaagtagacgatcgg 82243

                                                                         
Query: 387   ttggaactttccttgcgagtttccttagcccacttttcttcttctttatcctagggatat 446
             |||||||||| ||||||||||| || |||||    ||||||||||||||||||||| |||
Sbjct: 82244 ttggaacttttcttgcgagttttctcagccc---cttcttcttctttatcctaggggtat 82300

                                                                         
Query: 447   actttactagtttgaaacttgtcataaataagtttattccccgcctacctttactttatt 506
             ||||||| | |||||||||||||||||||||| ||||| |||||||||||||||||||||
Sbjct: 82301 actttaccaatttgaaacttgtcataaataaggttattacccgcctacctttactttatt 82360

              
Query: 507   t 507
             |
Sbjct: 82361 t 82361



 Score =  178 bits (90), Expect = 1e-41
 Identities = 111/118 (94%)
 Strand = Plus / Minus

                                                                          
Query: 523    ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 582
              |||| ||||||||||||| ||||||| ||||||||||||||||||||||||||||| | |
Sbjct: 140446 ttctgaatctttctattctgaattcaattaacgacgagatttagtatcctttcttgtact 140387

                                                                        
Query: 583    ttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccata 640
              |||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 140386 ttcataactcgtgaaatgccgagtaggcacgaattcccccaatttgcgacctaccata 140329



 Score =  178 bits (90), Expect = 1e-41
 Identities = 111/118 (94%)
 Strand = Plus / Plus

                                                                         
Query: 523   ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 582
             |||| ||||||||||||| ||||||| ||||||||||||||||||||||||||||| | |
Sbjct: 82391 ttctgaatctttctattctgaattcaattaacgacgagatttagtatcctttcttgtact 82450

                                                                       
Query: 583   ttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccata 640
             |||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 82451 ttcataactcgtgaaatgccgagtaggcacgaattcccccaatttgcgacctaccata 82508



 Score =  105 bits (53), Expect = 2e-19
 Identities = 65/69 (94%)
 Strand = Plus / Plus

                                                                         
Query: 1     aatcttagatggatctaaaggttatttagatttctttactatatttagtacaattgttat 60
             |||||||||| ||||||||| |||||| ||||||||||||||||||||||||||||||||
Sbjct: 81858 aatcttagattgatctaaagattattttgatttctttactatatttagtacaattgttat 81917

                      
Query: 61    atgacacat 69
             || ||||||
Sbjct: 81918 attacacat 81926

---

>emb|Y00329.1|CHZMRP22 Maize chloroplast rpl22 gene for ribosomal protein L22
          Length = 607

 Score =  571 bits (288), Expect = e-159
 Identities = 390/422 (92%), Gaps = 4/422 (0%)
 Strand = Plus / Minus

                                                                       
Query: 87  aactacgtcctcgagctcgaggtctgaatttctt-cataatagtactcctactgacttcg 145
           ||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||
Sbjct: 481 aactacgtcctcgagctcgaggtctgaatttttttcataatagtactcctactgacttcg 422

                                                                       
Query: 146 gctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggct 205
           |||||||| ||||||||||||| |||||||||||||||||||||||| |||||||| |||
Sbjct: 421 gctttagtgatgaataaattcgttttgtcgaaatccctataatgagtagcatttgctgct 362

                                                                       
Query: 206 gccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatc 265
           ||||||||||||||||||||||||||||| ||||||||||| |||||||| |||||||||
Sbjct: 361 gccgaataaaccaactttaagatgggatacgatgctcgataaggcatgagattcagtatc 302

                                                                       
Query: 266 ataacagtttcctcgtagtaacgccaccgaatctcgtcaagaactctttgtgctttgaaa 325
           ||||| |||||||||||||||||||| |||||||| || |||||||||||||||||||||
Sbjct: 301 ataacggtttcctcgtagtaacgccagcgaatctcatctagaactctttgtgctttgaaa 242

                                                                       
Query: 326 acagacatagggatacgtttttgtgctttgaaaactctctcgaacttaagtagacgatcg 385
           ||||||||| | || |||||||||||||||||||| |  ||||| |||||||||||||||
Sbjct: 241 acagacatatgtatgcgtttttgtgctttgaaaacccgttcgaatttaagtagacgatcg 182

                                                                       
Query: 386 gttggaactttccttgcgagtttccttagcccacttttcttcttctttatcctagggata 445
           ||||||||||| ||||||||||| || |||||    ||||||||||||||||||||| ||
Sbjct: 181 gttggaacttttcttgcgagttttctcagccc---cttcttcttctttatcctaggggta 125

                                                                       
Query: 446 tactttactagtttgaaacttgtcataaataagtttattccccgcctacctttactttat 505
           |||||||| | |||||||||||||||||||||| ||||| ||||||||||||||||||||
Sbjct: 124 tactttaccaatttgaaacttgtcataaataaggttattacccgcctacctttactttat 65

             
Query: 506 tt 507
           ||
Sbjct: 64  tt 63



 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 63/69 (91%)
 Strand = Plus / Minus

                                                                       
Query: 1   aatcttagatggatctaaaggttatttagatttctttactatatttagtacaattgttat 60
           |||||||||| |||||||||   |||| ||||||||||||||||||||||||||||||||
Sbjct: 567 aatcttagattgatctaaagaccattttgatttctttactatatttagtacaattgttat 508

                    
Query: 61  atgacacat 69
           || ||||||
Sbjct: 507 attacacat 499



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                            
Query: 523 ttcttaatctttctattcagaattcagttaacg 555
           |||| ||||||||||||| ||||||| ||||||
Sbjct: 33  ttctgaatctttctattctgaattcaattaacg 1

---

>gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast, complete genome
          Length = 141182

 Score =  561 bits (283), Expect = e-156
 Identities = 387/421 (91%), Gaps = 3/421 (0%)
 Strand = Plus / Plus

                                                                        
Query: 87   aactacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcgg 146
            ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 3053 aactacgtcctcgagctcgaggtctgaattttttcataatagtactcctactgacttcgg 3112

                                                                        
Query: 147  ctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggctg 206
            ||||||| ||||||||||| | |||||||||||||||||||||||| |||||||| ||||
Sbjct: 3113 ctttagtgatgaataaatttgttttgtcgaaatccctataatgagtagcatttgctgctg 3172

                                                                        
Query: 207  ccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatca 266
            |||||||||||||||||||||||||||| ||||||||||| |||||||| ||||||||||
Sbjct: 3173 ccgaataaaccaactttaagatgggatacgatgctcgataaggcatgagattcagtatca 3232

                                                                        
Query: 267  taacagtttcctcgtagtaacgccaccgaatctcgtcaagaactctttgtgctttgaaaa 326
            |||| |||||||||||||||||||| |||||||| || ||||||||||||||||||||||
Sbjct: 3233 taacggtttcctcgtagtaacgccagcgaatctcatctagaactctttgtgctttgaaaa 3292

                                                                        
Query: 327  cagacatagggatacgtttttgtgctttgaaaactctctcgaacttaagtagacgatcgg 386
            |||||||| | || |||||||||||||||||||| |  ||||| ||||||||||||||||
Sbjct: 3293 cagacatatgtatgcgtttttgtgctttgaaaacccgttcgaatttaagtagacgatcgg 3352

                                                                        
Query: 387  ttggaactttccttgcgagtttccttagcccacttttcttcttctttatcctagggatat 446
            |||||||||| ||||||||||| || |||||    ||||||||||||||||||||| |||
Sbjct: 3353 ttggaacttttcttgcgagttttctcagccc---cttcttcttctttatcctaggggtat 3409

                                                                        
Query: 447  actttactagtttgaaacttgtcataaataagtttattccccgcctacctttactttatt 506
            ||||||| | |||||||||||||||||||||| ||||| |||||||| ||||| ||||||
Sbjct: 3410 actttaccaatttgaaacttgtcataaataaggttattacccgcctatctttattttatt 3469

             
Query: 507  t 507
            |
Sbjct: 3470 t 3470



 Score =  178 bits (90), Expect = 1e-41
 Identities = 111/118 (94%)
 Strand = Plus / Minus

                                                                         
Query: 523   ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 582
             |||| ||||||||||||| ||||||| ||||||||||||||||||||||||||||| | |
Sbjct: 61618 ttctgaatctttctattctgaattcaattaacgacgagatttagtatcctttcttgtact 61559

                                                                       
Query: 583   ttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccata 640
             |||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 61558 ttcataactcgtgaaatgccgagtaggcacgaattcccccaatttgcgacctaccata 61501



 Score =  178 bits (90), Expect = 1e-41
 Identities = 111/118 (94%)
 Strand = Plus / Plus

                                                                        
Query: 523  ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 582
            |||| ||||||||||||| ||||||| ||||||||||||||||||||||||||||| | |
Sbjct: 3500 ttctgaatctttctattctgaattcaattaacgacgagatttagtatcctttcttgtact 3559

                                                                      
Query: 583  ttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccata 640
            |||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 3560 ttcataactcgtgaaatgccgagtaggcacgaattcccccaatttgcgacctaccata 3617



 Score =  105 bits (53), Expect = 2e-19
 Identities = 62/65 (95%)
 Strand = Plus / Plus

                                                                        
Query: 5    ttagatggatctaaaggttatttagatttctttactatatttagtacaattgttatatga 64
            |||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 2971 ttagattgatctaaagattatttagatttctttactatatttagtacaattgttatatta 3030

                 
Query: 65   cacat 69
            |||||
Sbjct: 3031 cacat 3035

---

>dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete genome
          Length = 141182

 Score =  561 bits (283), Expect = e-156
 Identities = 387/421 (91%), Gaps = 3/421 (0%)
 Strand = Plus / Plus

                                                                         
Query: 87    aactacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcgg 146
             ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 82610 aactacgtcctcgagctcgaggtctgaattttttcataatagtactcctactgacttcgg 82669

                                                                         
Query: 147   ctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggctg 206
             ||||||| ||||||||||| | |||||||||||||||||||||||| |||||||| ||||
Sbjct: 82670 ctttagtgatgaataaatttgttttgtcgaaatccctataatgagtagcatttgctgctg 82729

                                                                         
Query: 207   ccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatca 266
             |||||||||||||||||||||||||||| ||||||||||| |||||||| ||||||||||
Sbjct: 82730 ccgaataaaccaactttaagatgggatacgatgctcgataaggcatgagattcagtatca 82789

                                                                         
Query: 267   taacagtttcctcgtagtaacgccaccgaatctcgtcaagaactctttgtgctttgaaaa 326
             |||| |||||||||||||||||||| |||||||| || ||||||||||||||||||||||
Sbjct: 82790 taacggtttcctcgtagtaacgccagcgaatctcatctagaactctttgtgctttgaaaa 82849

                                                                         
Query: 327   cagacatagggatacgtttttgtgctttgaaaactctctcgaacttaagtagacgatcgg 386
             |||||||| | || |||||||||||||||||||| |  ||||| ||||||||||||||||
Sbjct: 82850 cagacatatgtatgcgtttttgtgctttgaaaacccgttcgaatttaagtagacgatcgg 82909

                                                                         
Query: 387   ttggaactttccttgcgagtttccttagcccacttttcttcttctttatcctagggatat 446
             |||||||||| ||||||||||| || |||||    ||||||||||||||||||||| |||
Sbjct: 82910 ttggaacttttcttgcgagttttctcagccc---cttcttcttctttatcctaggggtat 82966

                                                                         
Query: 447   actttactagtttgaaacttgtcataaataagtttattccccgcctacctttactttatt 506
             ||||||| | |||||||||||||||||||||| ||||| |||||||| ||||| ||||||
Sbjct: 82967 actttaccaatttgaaacttgtcataaataaggttattacccgcctatctttattttatt 83026

              
Query: 507   t 507
             |
Sbjct: 83027 t 83027



 Score =  178 bits (90), Expect = 1e-41
 Identities = 111/118 (94%)
 Strand = Plus / Minus

                                                                          
Query: 523    ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 582
              |||| ||||||||||||| ||||||| ||||||||||||||||||||||||||||| | |
Sbjct: 141174 ttctgaatctttctattctgaattcaattaacgacgagatttagtatcctttcttgtact 141115

                                                                        
Query: 583    ttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccata 640
              |||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 141114 ttcataactcgtgaaatgccgagtaggcacgaattcccccaatttgcgacctaccata 141057



 Score =  178 bits (90), Expect = 1e-41
 Identities = 111/118 (94%)
 Strand = Plus / Plus

                                                                         
Query: 523   ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 582
             |||| ||||||||||||| ||||||| ||||||||||||||||||||||||||||| | |
Sbjct: 83057 ttctgaatctttctattctgaattcaattaacgacgagatttagtatcctttcttgtact 83116

                                                                       
Query: 583   ttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccata 640
             |||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 83117 ttcataactcgtgaaatgccgagtaggcacgaattcccccaatttgcgacctaccata 83174



 Score =  105 bits (53), Expect = 2e-19
 Identities = 62/65 (95%)
 Strand = Plus / Plus

                                                                         
Query: 5     ttagatggatctaaaggttatttagatttctttactatatttagtacaattgttatatga 64
             |||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 82528 ttagattgatctaaagattatttagatttctttactatatttagtacaattgttatatta 82587

                  
Query: 65    cacat 69
             |||||
Sbjct: 82588 cacat 82592

---

>dbj|AP005675.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1001_G09
          Length = 118018

 Score =  539 bits (272), Expect = e-150
 Identities = 376/410 (91%), Gaps = 3/410 (0%)
 Strand = Plus / Minus

                                                                         
Query: 87    aactacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcgg 146
             |||||||||||||||| |||||||||||||| ||||||||||||||   |||||||||||
Sbjct: 75201 aactacgtcctcgagcccgaggtctgaatttattcataatagtact---actgacttcgg 75145

                                                                         
Query: 147   ctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggctg 206
             ||||||| ||||||||||| |||||||||||||||||||||||||| |||||||| ||| 
Sbjct: 75144 ctttagtgatgaataaatttgctttgtcgaaatccctataatgagtagcatttgctgcta 75085

                                                                         
Query: 207   ccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatca 266
             |||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||
Sbjct: 75084 ccgaataaaccaactttaagatgggataagatgctcgataaggcatgaggttcaatatca 75025

                                                                         
Query: 267   taacagtttcctcgtagtaacgccaccgaatctcgtcaagaactctttgtgctttgaaaa 326
             |||||||||| |||||||||||||| |||||||| || |||||||||||| |||||||||
Sbjct: 75024 taacagtttcttcgtagtaacgccaacgaatctcatccagaactctttgtactttgaaaa 74965

                                                                         
Query: 327   cagacatagggatacgtttttgtgctttgaaaactctctcgaacttaagtagacgatcgg 386
             | |||||  |||| |||||||||||||||||||| |  ||||||||||||||| ||||||
Sbjct: 74964 cggacatgtggatgcgtttttgtgctttgaaaacccgttcgaacttaagtagatgatcgg 74905

                                                                         
Query: 387   ttggaactttccttgcgagtttccttagcccacttttcttcttctttatcctagggatat 446
             |||| ||||| ||||||||||||||||||||||| |||||||||||||||| |||| |||
Sbjct: 74904 ttggtacttttcttgcgagtttccttagcccactcttcttcttctttatcccaggggtat 74845

                                                               
Query: 447   actttactagtttgaaacttgtcataaataagtttattccccgcctacct 496
             ||||||| |||||||||||||| ||||||||| ||||||||||| |||||
Sbjct: 74844 actttaccagtttgaaacttgttataaataaggttattccccgcttacct 74795



 Score =  176 bits (89), Expect = 6e-41
 Identities = 107/113 (94%)
 Strand = Plus / Minus

                                                                         
Query: 528   aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 587
             ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 74774 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 74715

                                                                  
Query: 588   aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccata 640
             ||||||| ||||||||||| || |||||||| |||||||||||||||||||||
Sbjct: 74714 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccata 74662



 Score =  123 bits (62), Expect = 8e-25
 Identities = 68/70 (97%)
 Strand = Plus / Minus

                                                                         
Query: 1     aatcttagatggatctaaaggttatttagatttctttactatatttagtacaattgttat 60
             |||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||
Sbjct: 75288 aatcttagatggatctaaagattatttcgatttctttactatatttagtacaattgttat 75229

                       
Query: 61    atgacacatg 70
             ||||||||||
Sbjct: 75228 atgacacatg 75219

---

>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score =  462 bits (233), Expect = e-127
 Identities = 405/463 (87%), Gaps = 4/463 (0%)
 Strand = Plus / Minus

                                                                            
Query: 36       ttactatatttagtacaattgttatatgacacatgcnnnnnnnnatagggaaactacgtc 95
                ||||||||||||||| |||||||||||||||||||         || ||  |||||||||
Sbjct: 18328526 ttactatatttagtagaattgttatatgacacatggttttatttatgggagaactacgtc 18328467

                                                                            
Query: 96       ctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcggctttagtaa 155
                |||||||  ||||||||||||| |||||||||||||||||| |||||||||||||||| |
Sbjct: 18328466 ctcgagcctgaggtctgaatttattcataatagtactcctattgacttcggctttagtga 18328407

                                                                            
Query: 156      tgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggctgccgaataaa 215
                |||| ||||| ||||||||||||||| |||||||||| |||||||| |||||||||||||
Sbjct: 18328406 tgaacaaatttgctttgtcgaaatccttataatgagtagcatttgctgctgccgaataaa 18328347

                                                                            
Query: 216      ccaactttaagatgggataagatgctcgatagggcatgaggttcagtatcataacagttt 275
                ||||||||||||||||||||||||||||||| ||||||||||| | ||||||||||||||
Sbjct: 18328346 ccaactttaagatgggataagatgctcgataaggcatgaggtttaatatcataacagttt 18328287

                                                                            
Query: 276      cctcgtagtaacgccaccgaatctcgtcaagaactctttgtgctttgaaaacagacatag 335
                | |||||||||| ||| | |||||| || | |||||||||| |||||||||| |||||  
Sbjct: 18328286 cttcgtagtaacaccaacaaatctcatccataactctttgtactttgaaaacggacatgt 18328227

                                                                            
Query: 336      ggatacgtttttgtgctttgaaaactctctcgaacttaagtagacgatcggttgg--aac 393
                ||||  ||||| ||||||||||||  | |||| ||||||||||||||||||||||   ||
Sbjct: 18328226 ggatgtgttttcgtgctttgaaaa--ccctcgtacttaagtagacgatcggttggtatac 18328169

                                                                            
Query: 394      tttccttgcgagtttccttagcccacttttcttcttctttatcctagggatatactttac 453
                ||| |||  ||||||| || ||||||| ||||||||||||||||||||| ||||||||| 
Sbjct: 18328168 ttttcttctgagtttctttggcccactcttcttcttctttatcctaggggtatactttaa 18328109

                                                           
Query: 454      tagtttgaaacttgtcataaataagtttattccccgcctacct 496
                 |||||||||||||||||||||||| ||||||||||| |||||
Sbjct: 18328108 cagtttgaaacttgtcataaataagattattccccgcttacct 18328066



 Score =  168 bits (85), Expect = 1e-38
 Identities = 106/113 (93%)
 Strand = Plus / Plus

                                                                            
Query: 528      aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 587
                ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 11412131 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 11412190

                                                                     
Query: 588      aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccata 640
                ||||||| ||||||||||| || |||||||| |||||||||||||||| ||||
Sbjct: 11412191 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctatcata 11412243

---

>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score =  462 bits (233), Expect = e-127
 Identities = 405/463 (87%), Gaps = 4/463 (0%)
 Strand = Plus / Minus

                                                                            
Query: 36       ttactatatttagtacaattgttatatgacacatgcnnnnnnnnatagggaaactacgtc 95
                ||||||||||||||| |||||||||||||||||||         || ||  |||||||||
Sbjct: 18254847 ttactatatttagtagaattgttatatgacacatggttttatttatgggagaactacgtc 18254788

                                                                            
Query: 96       ctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcggctttagtaa 155
                |||||||  ||||||||||||| |||||||||||||||||| |||||||||||||||| |
Sbjct: 18254787 ctcgagcctgaggtctgaatttattcataatagtactcctattgacttcggctttagtga 18254728

                                                                            
Query: 156      tgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggctgccgaataaa 215
                |||| ||||| ||||||||||||||| |||||||||| |||||||| |||||||||||||
Sbjct: 18254727 tgaacaaatttgctttgtcgaaatccttataatgagtagcatttgctgctgccgaataaa 18254668

                                                                            
Query: 216      ccaactttaagatgggataagatgctcgatagggcatgaggttcagtatcataacagttt 275
                ||||||||||||||||||||||||||||||| ||||||||||| | ||||||||||||||
Sbjct: 18254667 ccaactttaagatgggataagatgctcgataaggcatgaggtttaatatcataacagttt 18254608

                                                                            
Query: 276      cctcgtagtaacgccaccgaatctcgtcaagaactctttgtgctttgaaaacagacatag 335
                | |||||||||| ||| | |||||| || | |||||||||| |||||||||| |||||  
Sbjct: 18254607 cttcgtagtaacaccaacaaatctcatccataactctttgtactttgaaaacggacatgt 18254548

                                                                            
Query: 336      ggatacgtttttgtgctttgaaaactctctcgaacttaagtagacgatcggttgg--aac 393
                ||||  ||||| ||||||||||||  | |||| ||||||||||||||||||||||   ||
Sbjct: 18254547 ggatgtgttttcgtgctttgaaaa--ccctcgtacttaagtagacgatcggttggtatac 18254490

                                                                            
Query: 394      tttccttgcgagtttccttagcccacttttcttcttctttatcctagggatatactttac 453
                ||| |||  ||||||| || ||||||| ||||||||||||||||||||| ||||||||| 
Sbjct: 18254489 ttttcttctgagtttctttggcccactcttcttcttctttatcctaggggtatactttaa 18254430

                                                           
Query: 454      tagtttgaaacttgtcataaataagtttattccccgcctacct 496
                 |||||||||||||||||||||||| ||||||||||| |||||
Sbjct: 18254429 cagtttgaaacttgtcataaataagattattccccgcttacct 18254387



 Score =  168 bits (85), Expect = 1e-38
 Identities = 106/113 (93%)
 Strand = Plus / Plus

                                                                            
Query: 528      aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 587
                ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 11411802 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 11411861

                                                                     
Query: 588      aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccata 640
                ||||||| ||||||||||| || |||||||| |||||||||||||||| ||||
Sbjct: 11411862 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctatcata 11411914

---

>emb|AL831799.3|CNS08CAC Oryza sativa chromosome 12, . BAC OSJNBa0087A02 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 177034

 Score =  462 bits (233), Expect = e-127
 Identities = 405/463 (87%), Gaps = 4/463 (0%)
 Strand = Plus / Plus

                                                                         
Query: 36    ttactatatttagtacaattgttatatgacacatgcnnnnnnnnatagggaaactacgtc 95
             ||||||||||||||| |||||||||||||||||||         || ||  |||||||||
Sbjct: 42468 ttactatatttagtagaattgttatatgacacatggttttatttatgggagaactacgtc 42527

                                                                         
Query: 96    ctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcggctttagtaa 155
             |||||||  ||||||||||||| |||||||||||||||||| |||||||||||||||| |
Sbjct: 42528 ctcgagcctgaggtctgaatttattcataatagtactcctattgacttcggctttagtga 42587

                                                                         
Query: 156   tgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggctgccgaataaa 215
             |||| ||||| ||||||||||||||| |||||||||| |||||||| |||||||||||||
Sbjct: 42588 tgaacaaatttgctttgtcgaaatccttataatgagtagcatttgctgctgccgaataaa 42647

                                                                         
Query: 216   ccaactttaagatgggataagatgctcgatagggcatgaggttcagtatcataacagttt 275
             ||||||||||||||||||||||||||||||| ||||||||||| | ||||||||||||||
Sbjct: 42648 ccaactttaagatgggataagatgctcgataaggcatgaggtttaatatcataacagttt 42707

                                                                         
Query: 276   cctcgtagtaacgccaccgaatctcgtcaagaactctttgtgctttgaaaacagacatag 335
             | |||||||||| ||| | |||||| || | |||||||||| |||||||||| |||||  
Sbjct: 42708 cttcgtagtaacaccaacaaatctcatccataactctttgtactttgaaaacggacatgt 42767

                                                                         
Query: 336   ggatacgtttttgtgctttgaaaactctctcgaacttaagtagacgatcggttgg--aac 393
             ||||  ||||| ||||||||||||  | |||| ||||||||||||||||||||||   ||
Sbjct: 42768 ggatgtgttttcgtgctttgaaaa--ccctcgtacttaagtagacgatcggttggtatac 42825

                                                                         
Query: 394   tttccttgcgagtttccttagcccacttttcttcttctttatcctagggatatactttac 453
             ||| |||  ||||||| || ||||||| ||||||||||||||||||||| ||||||||| 
Sbjct: 42826 ttttcttctgagtttctttggcccactcttcttcttctttatcctaggggtatactttaa 42885

                                                        
Query: 454   tagtttgaaacttgtcataaataagtttattccccgcctacct 496
              |||||||||||||||||||||||| ||||||||||| |||||
Sbjct: 42886 cagtttgaaacttgtcataaataagattattccccgcttacct 42928

---

>gb|DQ113925.1| Calamagrostis breweri isolate X17 trnH-psbA intergenic spacer,
           complete sequence; chloroplast
          Length = 598

 Score =  200 bits (101), Expect = 4e-48
 Identities = 110/113 (97%)
 Strand = Plus / Plus

                                                                       
Query: 528 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 587
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 127 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcattttcat 186

                                                                
Query: 588 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccata 640
           ||||||| ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 187 aactcgtgaaatgccgagtaggcacgaattcccccaatttgcgacctaccata 239

---

>gb|DQ113924.1| Calamagrostis breweri isolate RMP0198 trnH-psbA intergenic spacer,
           complete sequence; chloroplast
          Length = 598

 Score =  200 bits (101), Expect = 4e-48
 Identities = 110/113 (97%)
 Strand = Plus / Plus

                                                                       
Query: 528 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 587
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 127 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcattttcat 186

                                                                
Query: 588 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccata 640
           ||||||| ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 187 aactcgtgaaatgccgagtaggcacgaattcccccaatttgcgacctaccata 239

---

>gb|DQ113923.1| Calamagrostis breweri isolate BW8259 trnH-psbA intergenic spacer,
           complete sequence; chloroplast
          Length = 598

 Score =  200 bits (101), Expect = 4e-48
 Identities = 110/113 (97%)
 Strand = Plus / Plus

                                                                       
Query: 528 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 587
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 127 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcattttcat 186

                                                                
Query: 588 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccata 640
           ||||||| ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 187 aactcgtgaaatgccgagtaggcacgaattcccccaatttgcgacctaccata 239

---

>gb|DQ113922.1| Calamagrostis breweri isolate RMP0007 trnH-psbA intergenic spacer,
           complete sequence; chloroplast
          Length = 598

 Score =  200 bits (101), Expect = 4e-48
 Identities = 110/113 (97%)
 Strand = Plus / Plus

                                                                       
Query: 528 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 587
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 127 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcattttcat 186

                                                                
Query: 588 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccata 640
           ||||||| ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 187 aactcgtgaaatgccgagtaggcacgaattcccccaatttgcgacctaccata 239

---

>gb|DQ113921.1| Calamagrostis muiriana isolate B4 trnH-psbA intergenic spacer,
           complete sequence; chloroplast
          Length = 598

 Score =  200 bits (101), Expect = 4e-48
 Identities = 110/113 (97%)
 Strand = Plus / Plus

                                                                       
Query: 528 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 587
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 127 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcattttcat 186

                                                                
Query: 588 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccata 640
           ||||||| ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 187 aactcgtgaaatgccgagtaggcacgaattcccccaatttgcgacctaccata 239

---

>gb|DQ113920.1| Calamagrostis muiriana isolate B3 trnH-psbA intergenic spacer,
           complete sequence; chloroplast
          Length = 598

 Score =  200 bits (101), Expect = 4e-48
 Identities = 110/113 (97%)
 Strand = Plus / Plus

                                                                       
Query: 528 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 587
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 127 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcattttcat 186

                                                                
Query: 588 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccata 640
           ||||||| ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 187 aactcgtgaaatgccgagtaggcacgaattcccccaatttgcgacctaccata 239

---

>gb|DQ113919.1| Calamagrostis muiriana isolate B1 trnH-psbA intergenic spacer,
           complete sequence; chloroplast
          Length = 597

 Score =  200 bits (101), Expect = 4e-48
 Identities = 110/113 (97%)
 Strand = Plus / Plus

                                                                       
Query: 528 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 587
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 127 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcattttcat 186

                                                                
Query: 588 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccata 640
           ||||||| ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 187 aactcgtgaaatgccgagtaggcacgaattcccccaatttgcgacctaccata 239

---

>gb|DQ113918.1| Calamagrostis muiriana isolate A7 trnH-psbA intergenic spacer,
           complete sequence; chloroplast
          Length = 598

 Score =  200 bits (101), Expect = 4e-48
 Identities = 110/113 (97%)
 Strand = Plus / Plus

                                                                       
Query: 528 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 587
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 127 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcattttcat 186

                                                                
Query: 588 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccata 640
           ||||||| ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 187 aactcgtgaaatgccgagtaggcacgaattcccccaatttgcgacctaccata 239

---

>gb|DQ113917.1| Calamagrostis muiriana isolate A1 trnH-psbA intergenic spacer,
           complete sequence; chloroplast
          Length = 598

 Score =  200 bits (101), Expect = 4e-48
 Identities = 110/113 (97%)
 Strand = Plus / Plus

                                                                       
Query: 528 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 587
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 127 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcattttcat 186

                                                                
Query: 588 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccata 640
           ||||||| ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 187 aactcgtgaaatgccgagtaggcacgaattcccccaatttgcgacctaccata 239

---

>gb|DQ369760.1| Festuca rubra isolate 3 PsbA (psbA) gene, partial cds; and
           psbA-trnH intergenic spacer, partial sequence;
           chloroplast
          Length = 633

 Score =  200 bits (101), Expect = 4e-48
 Identities = 110/113 (97%)
 Strand = Plus / Plus

                                                                       
Query: 528 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 587
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 161 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcattttcat 220

                                                                
Query: 588 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccata 640
           ||||||| ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 221 aactcgtgaaatgccgagtaggcacgaattcccccaatttgcgacctaccata 273

---

>gb|DQ369756.1| Festuca arizonica isolate 1 PsbA (psbA) gene, partial cds; and
           psbA-trnH intergenic spacer, partial sequence;
           chloroplast
          Length = 633

 Score =  200 bits (101), Expect = 4e-48
 Identities = 110/113 (97%)
 Strand = Plus / Plus

                                                                       
Query: 528 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 587
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 161 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcattttcat 220

                                                                
Query: 588 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccata 640
           ||||||| ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 221 aactcgtgaaatgccgagtaggcacgaattcccccaatttgcgacctaccata 273

---

>emb|X13327.1|CHSCPSBA Secale cereale chloroplast psbA gene for herbicide-binding protein D1
          Length = 2729

 Score =  194 bits (98), Expect = 2e-46
 Identities = 117/123 (95%), Gaps = 4/123 (3%)
 Strand = Plus / Plus

                                                                        
Query: 522  cttcttaatctttctattcagaat----tcagttaacgacgagatttagtatcctttctt 577
            ||||||||||||||||||||||||    ||||||||||||||||||||||||||||||||
Sbjct: 2411 cttcttaatctttctattcagaatctgatcagttaacgacgagatttagtatcctttctt 2470

                                                                        
Query: 578  gcattttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctacc 637
            ||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 2471 gcattttcataactcgtgaaatgccgagtaggcacgaattcccccaatttgcgacctacc 2530

               
Query: 638  ata 640
            |||
Sbjct: 2531 ata 2533

---

>gb|AY016310.1| Phragmites australis trnH-psbA intergenic spacer, chloroplast
           sequence
          Length = 585

 Score =  194 bits (98), Expect = 2e-46
 Identities = 113/118 (95%)
 Strand = Plus / Minus

                                                                       
Query: 523 ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 582
           |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
Sbjct: 448 ttctgaatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcact 389

                                                                     
Query: 583 ttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccata 640
           |||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 388 ttcataactcgtgaaatgccgagtaggcacgaattcccccaatttgcgacctaccata 331

---

>gb|AY769149.1| Paspalum vaginatum psbA-trnH intergenic spacer, partial sequence;
           chloroplast
          Length = 535

 Score =  194 bits (98), Expect = 2e-46
 Identities = 113/118 (95%)
 Strand = Plus / Minus

                                                                       
Query: 523 ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 582
           |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
Sbjct: 436 ttctgaatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcact 377

                                                                     
Query: 583 ttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccata 640
           |||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 376 ttcataactcgtgaaatgccgagtaggcacgaattcccccaatttgcgacctaccata 319

---

>gb|AY769148.1| Paspalum urvillei psbA-trnH intergenic spacer, partial sequence;
           chloroplast
          Length = 546

 Score =  194 bits (98), Expect = 2e-46
 Identities = 113/118 (95%)
 Strand = Plus / Minus

                                                                       
Query: 523 ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 582
           |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
Sbjct: 447 ttctgaatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcact 388

                                                                     
Query: 583 ttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccata 640
           |||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 387 ttcataactcgtgaaatgccgagtaggcacgaattcccccaatttgcgacctaccata 330

---

>gb|AY769147.1| Paspalum subciliatum psbA-trnH intergenic spacer, partial sequence;
           chloroplast
          Length = 537

 Score =  194 bits (98), Expect = 2e-46
 Identities = 113/118 (95%)
 Strand = Plus / Minus

                                                                       
Query: 523 ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 582
           |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
Sbjct: 437 ttctgaatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcact 378

                                                                     
Query: 583 ttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccata 640
           |||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 377 ttcataactcgtgaaatgccgagtaggcacgaattcccccaatttgcgacctaccata 320

---

>gb|AY769146.1| Paspalum ramboi psbA-trnH intergenic spacer, partial sequence;
           chloroplast
          Length = 537

 Score =  194 bits (98), Expect = 2e-46
 Identities = 113/118 (95%)
 Strand = Plus / Minus

                                                                       
Query: 523 ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 582
           |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
Sbjct: 437 ttctgaatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcact 378

                                                                     
Query: 583 ttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccata 640
           |||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 377 ttcataactcgtgaaatgccgagtaggcacgaattcccccaatttgcgacctaccata 320

---

>gb|AY769141.1| Paspalum minus psbA-trnH intergenic spacer, partial sequence;
           chloroplast
          Length = 537

 Score =  194 bits (98), Expect = 2e-46
 Identities = 113/118 (95%)
 Strand = Plus / Minus

                                                                       
Query: 523 ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 582
           |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
Sbjct: 437 ttctgaatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcact 378

                                                                     
Query: 583 ttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccata 640
           |||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 377 ttcataactcgtgaaatgccgagtaggcacgaattcccccaatttgcgacctaccata 320

---

>gb|AY769139.1| Paspalum lividum psbA-trnH intergenic spacer, partial sequence;
           chloroplast
          Length = 523

 Score =  194 bits (98), Expect = 2e-46
 Identities = 113/118 (95%)
 Strand = Plus / Minus

                                                                       
Query: 523 ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 582
           |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
Sbjct: 420 ttctgaatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcact 361

                                                                     
Query: 583 ttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccata 640
           |||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 360 ttcataactcgtgaaatgccgagtaggcacgaattcccccaatttgcgacctaccata 303

---

>gb|AY769138.1| Paspalum lineare psbA-trnH intergenic spacer, partial sequence;
           chloroplast
          Length = 536

 Score =  194 bits (98), Expect = 2e-46
 Identities = 113/118 (95%)
 Strand = Plus / Minus

                                                                       
Query: 523 ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 582
           |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
Sbjct: 437 ttctgaatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcact 378

                                                                     
Query: 583 ttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccata 640
           |||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 377 ttcataactcgtgaaatgccgagtaggcacgaattcccccaatttgcgacctaccata 320

---

>gb|AY769137.1| Paspalum juergensii psbA-trnH intergenic spacer, partial sequence;
           chloroplast
          Length = 540

 Score =  194 bits (98), Expect = 2e-46
 Identities = 113/118 (95%)
 Strand = Plus / Minus

                                                                       
Query: 523 ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 582
           |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
Sbjct: 444 ttctgaatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcact 385

                                                                     
Query: 583 ttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccata 640
           |||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 384 ttcataactcgtgaaatgccgagtaggcacgaattcccccaatttgcgacctaccata 327

---

>gb|AY769136.1| Paspalum ionanthum psbA-trnH intergenic spacer, partial sequence;
           chloroplast
          Length = 537

 Score =  194 bits (98), Expect = 2e-46
 Identities = 113/118 (95%)
 Strand = Plus / Minus

                                                                       
Query: 523 ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 582
           |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
Sbjct: 437 ttctgaatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcact 378

                                                                     
Query: 583 ttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccata 640
           |||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 377 ttcataactcgtgaaatgccgagtaggcacgaattcccccaatttgcgacctaccata 320

---

>gb|AY769135.1| Paspalum intermedium psbA-trnH intergenic spacer, partial sequence;
           chloroplast
          Length = 535

 Score =  194 bits (98), Expect = 2e-46
 Identities = 113/118 (95%)
 Strand = Plus / Minus

                                                                       
Query: 523 ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 582
           |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
Sbjct: 436 ttctgaatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcact 377

                                                                     
Query: 583 ttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccata 640
           |||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 376 ttcataactcgtgaaatgccgagtaggcacgaattcccccaatttgcgacctaccata 319

---

>gb|AY769134.1| Paspalum flaccidum psbA-trnH intergenic spacer, partial sequence;
           chloroplast
          Length = 537

 Score =  194 bits (98), Expect = 2e-46
 Identities = 113/118 (95%)
 Strand = Plus / Minus

                                                                       
Query: 523 ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 582
           |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
Sbjct: 437 ttctgaatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcact 378

                                                                     
Query: 583 ttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccata 640
           |||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 377 ttcataactcgtgaaatgccgagtaggcacgaattcccccaatttgcgacctaccata 320

---

>gb|AY769133.1| Paspalum filifolium psbA-trnH intergenic spacer, partial sequence;
           chloroplast
          Length = 535

 Score =  194 bits (98), Expect = 2e-46
 Identities = 113/118 (95%)
 Strand = Plus / Minus

                                                                       
Query: 523 ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 582
           |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
Sbjct: 435 ttctgaatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcact 376

                                                                     
Query: 583 ttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccata 640
           |||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 375 ttcataactcgtgaaatgccgagtaggcacgaattcccccaatttgcgacctaccata 318

---

>gb|AY769132.1| Paspalum equitans psbA-trnH intergenic spacer, partial sequence;
           chloroplast
          Length = 537

 Score =  194 bits (98), Expect = 2e-46
 Identities = 113/118 (95%)
 Strand = Plus / Minus

                                                                       
Query: 523 ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 582
           |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
Sbjct: 437 ttctgaatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcact 378

                                                                     
Query: 583 ttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccata 640
           |||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 377 ttcataactcgtgaaatgccgagtaggcacgaattcccccaatttgcgacctaccata 320

---

>gb|AY769130.1| Paspalum dilatatum psbA-trnH intergenic spacer, partial sequence;
           chloroplast
          Length = 508

 Score =  194 bits (98), Expect = 2e-46
 Identities = 113/118 (95%)
 Strand = Plus / Minus

                                                                       
Query: 523 ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 582
           |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
Sbjct: 408 ttctgaatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcact 349

                                                                     
Query: 583 ttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccata 640
           |||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 348 ttcataactcgtgaaatgccgagtaggcacgaattcccccaatttgcgacctaccata 291

---

>gb|AY769128.1| Paspalum dasypleurum psbA-trnH intergenic spacer, partial sequence;
           chloroplast
          Length = 535

 Score =  194 bits (98), Expect = 2e-46
 Identities = 113/118 (95%)
 Strand = Plus / Minus

                                                                       
Query: 523 ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 582
           |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
Sbjct: 437 ttctgaatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcact 378

                                                                     
Query: 583 ttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccata 640
           |||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 377 ttcataactcgtgaaatgccgagtaggcacgaattcccccaatttgcgacctaccata 320

---

>gb|AY769127.1| Paspalum cromyorhizon psbA-trnH intergenic spacer, partial
           sequence; chloroplast
          Length = 537

 Score =  194 bits (98), Expect = 2e-46
 Identities = 113/118 (95%)
 Strand = Plus / Minus

                                                                       
Query: 523 ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 582
           |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
Sbjct: 437 ttctgaatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcact 378

                                                                     
Query: 583 ttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccata 640
           |||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 377 ttcataactcgtgaaatgccgagtaggcacgaattcccccaatttgcgacctaccata 320

---

>gb|AY769126.1| Paspalum conduplicatum psbA-trnH intergenic spacer, partial
           sequence; chloroplast
          Length = 537

 Score =  194 bits (98), Expect = 2e-46
 Identities = 113/118 (95%)
 Strand = Plus / Minus

                                                                       
Query: 523 ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 582
           |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
Sbjct: 437 ttctgaatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcact 378

                                                                     
Query: 583 ttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccata 640
           |||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 377 ttcataactcgtgaaatgccgagtaggcacgaattcccccaatttgcgacctaccata 320

---

>gb|AY769124.1| Paspalum almum psbA-trnH intergenic spacer, partial sequence;
           chloroplast
          Length = 537

 Score =  194 bits (98), Expect = 2e-46
 Identities = 113/118 (95%)
 Strand = Plus / Minus

                                                                       
Query: 523 ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 582
           |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
Sbjct: 437 ttctgaatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcact 378

                                                                     
Query: 583 ttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccata 640
           |||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 377 ttcataactcgtgaaatgccgagtaggcacgaattcccccaatttgcgacctaccata 320

---

>gb|AY769123.1| Paspalum acuminatum psbA-trnH intergenic spacer, partial sequence;
           chloroplast
          Length = 538

 Score =  194 bits (98), Expect = 2e-46
 Identities = 113/118 (95%)
 Strand = Plus / Minus

                                                                       
Query: 523 ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 582
           |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
Sbjct: 438 ttctgaatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcact 379

                                                                     
Query: 583 ttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccata 640
           |||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 378 ttcataactcgtgaaatgccgagtaggcacgaattcccccaatttgcgacctaccata 321

---

>gb|AY769122.1| Thrasya petrosa psbA-trnH intergenic spacer, partial sequence;
           chloroplast
          Length = 479

 Score =  194 bits (98), Expect = 2e-46
 Identities = 113/118 (95%)
 Strand = Plus / Minus

                                                                       
Query: 523 ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 582
           |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
Sbjct: 408 ttctgaatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcact 349

                                                                     
Query: 583 ttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccata 640
           |||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 348 ttcataactcgtgaaatgccgagtaggcacgaattcccccaatttgcgacctaccata 291

---

>gb|AY941127.1| Paspalum quadrifarium psbA-trnH intergenic spacer, partial
           sequence; and rpl19 gene, complete cds; chloroplast
          Length = 494

 Score =  194 bits (98), Expect = 2e-46
 Identities = 113/118 (95%)
 Strand = Plus / Minus

                                                                       
Query: 523 ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 582
           |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
Sbjct: 407 ttctgaatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcact 348

                                                                     
Query: 583 ttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccata 640
           |||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 347 ttcataactcgtgaaatgccgagtaggcacgaattcccccaatttgcgacctaccata 290

---

>gb|AY941126.1| Paspalum exaltatum psbA-trnH intergenic spacer, partial sequence;
           and rpl19 gene, complete cds; chloroplast
          Length = 494

 Score =  194 bits (98), Expect = 2e-46
 Identities = 113/118 (95%)
 Strand = Plus / Minus

                                                                       
Query: 523 ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 582
           |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
Sbjct: 407 ttctgaatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcact 348

                                                                     
Query: 583 ttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccata 640
           |||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 347 ttcataactcgtgaaatgccgagtaggcacgaattcccccaatttgcgacctaccata 290

---

>gb|AY941125.1| Paspalum quarinii psbA-trnH intergenic spacer, partial sequence;
           and rpl19 gene, complete cds; chloroplast
          Length = 494

 Score =  194 bits (98), Expect = 2e-46
 Identities = 113/118 (95%)
 Strand = Plus / Minus

                                                                       
Query: 523 ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 582
           |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
Sbjct: 407 ttctgaatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcact 348

                                                                     
Query: 583 ttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccata 640
           |||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 347 ttcataactcgtgaaatgccgagtaggcacgaattcccccaatttgcgacctaccata 290

---

>gb|AY941123.1| Paspalum quadrifarium psbA-trnH intergenic spacer, partial
           sequence; and rpl19 gene, complete cds; chloroplast
          Length = 494

 Score =  194 bits (98), Expect = 2e-46
 Identities = 113/118 (95%)
 Strand = Plus / Minus

                                                                       
Query: 523 ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 582
           |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
Sbjct: 407 ttctgaatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcact 348

                                                                     
Query: 583 ttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccata 640
           |||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 347 ttcataactcgtgaaatgccgagtaggcacgaattcccccaatttgcgacctaccata 290

---

>gb|AY941122.1| Paspalum rufum psbA-trnH intergenic spacer, partial sequence; and
           rpl19 gene, complete cds; chloroplast
          Length = 494

 Score =  194 bits (98), Expect = 2e-46
 Identities = 113/118 (95%)
 Strand = Plus / Minus

                                                                       
Query: 523 ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 582
           |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
Sbjct: 407 ttctgaatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcact 348

                                                                     
Query: 583 ttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccata 640
           |||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 347 ttcataactcgtgaaatgccgagtaggcacgaattcccccaatttgcgacctaccata 290

---

>gb|AY941121.1| Paspalum intermedium psbA-trnH intergenic spacer, partial sequence;
           and rpl19 gene, complete cds; chloroplast
          Length = 494

 Score =  194 bits (98), Expect = 2e-46
 Identities = 113/118 (95%)
 Strand = Plus / Minus

                                                                       
Query: 523 ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 582
           |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
Sbjct: 407 ttctgaatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcact 348

                                                                     
Query: 583 ttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccata 640
           |||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 347 ttcataactcgtgaaatgccgagtaggcacgaattcccccaatttgcgacctaccata 290

---

>gb|AY941120.1| Paspalum haumanii psbA-trnH intergenic spacer, partial sequence;
           and rpl19 gene, complete cds; chloroplast
          Length = 494

 Score =  194 bits (98), Expect = 2e-46
 Identities = 113/118 (95%)
 Strand = Plus / Minus

                                                                       
Query: 523 ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 582
           |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
Sbjct: 407 ttctgaatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcact 348

                                                                     
Query: 583 ttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccata 640
           |||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 347 ttcataactcgtgaaatgccgagtaggcacgaattcccccaatttgcgacctaccata 290

---

>gb|DQ006214.1| Chasmanthium latifolium voucher Wells 4431 US PsbA (psbA) gene,
           partial cds; psbA-trnH intergenic spacer, complete
           sequence; and tRNA-His (trnH) gene, partial sequence;
           chloroplast
          Length = 612

 Score =  194 bits (98), Expect = 2e-46
 Identities = 113/118 (95%)
 Strand = Plus / Plus

                                                                       
Query: 523 ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 582
           |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
Sbjct: 147 ttctgaatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcact 206

                                                                     
Query: 583 ttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccata 640
           |||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 207 ttcataactcgtgaaatgccgagtaggcacgaattcccccaatttgcgacctaccata 264

---

>dbj|AB128634.1| Oryza granulata chloroplast DNA, containing SSR region (RCt12),
           strain:W0022
          Length = 332

 Score =  192 bits (97), Expect = 1e-45
 Identities = 109/113 (96%)
 Strand = Plus / Minus

                                                                       
Query: 528 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 587
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107

                                                                
Query: 588 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccata 640
           ||||||| ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 106 aactcgtgaaatgccgagtaggcacgaattcccccaatttgcgacctaccata 54

---

>dbj|AB128633.1| Oryza granulata chloroplast DNA, containing SSR region (RCt12),
           strain:W0067
          Length = 332

 Score =  192 bits (97), Expect = 1e-45
 Identities = 109/113 (96%)
 Strand = Plus / Minus

                                                                       
Query: 528 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 587
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107

                                                                
Query: 588 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccata 640
           ||||||| ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 106 aactcgtgaaatgccgagtaggcacgaattcccccaatttgcgacctaccata 54

---

>gb|AY769145.1| Paspalum pumilum psbA-trnH intergenic spacer, partial sequence;
           chloroplast
          Length = 536

 Score =  186 bits (94), Expect = 6e-44
 Identities = 112/118 (94%)
 Strand = Plus / Minus

                                                                       
Query: 523 ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 582
           |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
Sbjct: 437 ttctgaatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcact 378

                                                                     
Query: 583 ttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccata 640
           |||||||||||| ||||||||||||||||||||||| |||||||||||||| ||||||
Sbjct: 377 ttcataactcgtgaaatgccgagtaggcacgaattcccccaatttgcgacccaccata 320

---

>gb|AY769143.1| Paspalum pallens psbA-trnH intergenic spacer, partial sequence;
           chloroplast
          Length = 542

 Score =  186 bits (94), Expect = 6e-44
 Identities = 112/118 (94%)
 Strand = Plus / Minus

                                                                       
Query: 523 ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 582
           |||| ||||||||||||| ||||||||||||||||| ||||||||||||||||||||| |
Sbjct: 437 ttctgaatctttctattctgaattcagttaacgacgggatttagtatcctttcttgcact 378

                                                                     
Query: 583 ttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccata 640
           |||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 377 ttcataactcgtgaaatgccgagtaggcacgaattcccccaatttgcgacctaccata 320

---

>gb|AY769142.1| Paspalum notatum psbA-trnH intergenic spacer, partial sequence;
           chloroplast
          Length = 537

 Score =  186 bits (94), Expect = 6e-44
 Identities = 112/118 (94%)
 Strand = Plus / Minus

                                                                       
Query: 523 ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 582
           |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
Sbjct: 437 ttctgaatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcact 378

                                                                     
Query: 583 ttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccata 640
           |||||||||||| ||||||||||||||||||||||| |||||||| ||||||||||||
Sbjct: 377 ttcataactcgtgaaatgccgagtaggcacgaattcccccaatttacgacctaccata 320

---

>gb|DQ006178.1| Cyperus erythrorhizos voucher Wells 4458 US PsbA (psbA) gene,
           partial cds; psbA-trnH intergenic spacer, complete
           sequence; and tRNA-His (trnH) gene, partial sequence;
           chloroplast
          Length = 612

 Score =  186 bits (94), Expect = 6e-44
 Identities = 112/118 (94%)
 Strand = Plus / Plus

                                                                       
Query: 523 ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 582
           |||| ||| ||||||||| ||||||||||||||||||||||||||||||||||||||| |
Sbjct: 148 ttctgaatgtttctattctgaattcagttaacgacgagatttagtatcctttcttgcact 207

                                                                     
Query: 583 ttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccata 640
           |||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 208 ttcataactcgtgaaatgccgagtaggcacgaattcccccaatttgcgacctaccata 265

---

>dbj|AB128631.1| Oryza ridleyi chloroplast DNA, containing SSR region (RCt12),
           strain:W0001
          Length = 333

 Score =  184 bits (93), Expect = 2e-43
 Identities = 108/113 (95%)
 Strand = Plus / Minus

                                                                       
Query: 528 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 587
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107

                                                                
Query: 588 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccata 640
           ||||||| ||||| ||||||||||||||||| |||||||||||||||||||||
Sbjct: 106 aactcgtgaaatgacgagtaggcacgaattcccccaatttgcgacctaccata 54

---

>dbj|AB128630.1| Oryza longiglumis chloroplast DNA, containing SSR region (RCt12),
           strain:W1220
          Length = 333

 Score =  184 bits (93), Expect = 2e-43
 Identities = 108/113 (95%)
 Strand = Plus / Minus

                                                                       
Query: 528 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 587
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107

                                                                
Query: 588 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccata 640
           ||||||| ||||| ||||||||||||||||| |||||||||||||||||||||
Sbjct: 106 aactcgtgaaatgacgagtaggcacgaattcccccaatttgcgacctaccata 54

---

>dbj|AB128629.1| Oryza ridleyi chloroplast DNA, containing SSR region (RCt12),
           strain:W0604
          Length = 333

 Score =  184 bits (93), Expect = 2e-43
 Identities = 108/113 (95%)
 Strand = Plus / Minus

                                                                       
Query: 528 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 587
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107

                                                                
Query: 588 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccata 640
           ||||||| ||||| ||||||||||||||||| |||||||||||||||||||||
Sbjct: 106 aactcgtgaaatgacgagtaggcacgaattcccccaatttgcgacctaccata 54

---

>dbj|AB128628.1| Oryza longiglumis chloroplast DNA, containing SSR region (RCt12),
           strain:W1228
          Length = 333

 Score =  184 bits (93), Expect = 2e-43
 Identities = 108/113 (95%)
 Strand = Plus / Minus

                                                                       
Query: 528 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 587
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107

                                                                
Query: 588 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccata 640
           ||||||| ||||| ||||||||||||||||| |||||||||||||||||||||
Sbjct: 106 aactcgtgaaatgacgagtaggcacgaattcccccaatttgcgacctaccata 54

---

>gb|AY506529.1| Zea mays strain NB mitochondrion, complete genome
          Length = 569630

 Score =  182 bits (92), Expect = 9e-43
 Identities = 119/128 (92%)
 Strand = Plus / Plus

                                                                          
Query: 165    tcgctttgtcgaaatccctataatgagttgcatttgcggctgccgaataaaccaacttta 224
              |||||||||||||||||||||||||| | |||||||| ||||||||||||||||||||||
Sbjct: 212531 tcgctttgtcgaaatccctataatgaatagcatttgctgctgccgaataaaccaacttta 212590

                                                                          
Query: 225    agatgggataagatgctcgatagggcatgaggttcagtatcataacagtttcctcgtagt 284
              |||||||||||||||||| ||| ||||||||| ||||||||||||| |||||||| ||||
Sbjct: 212591 agatgggataagatgctcaataaggcatgagggtcagtatcataacggtttcctcctagt 212650

                      
Query: 285    aacgccac 292
              || |||||
Sbjct: 212651 aaggccac 212658

---

>gb|DQ490952.1| Zea mays subsp. mays genotype male-fertile NA mitochondrion, complete
              genome
          Length = 701046

 Score =  182 bits (92), Expect = 9e-43
 Identities = 119/128 (92%)
 Strand = Plus / Plus

                                                                          
Query: 165    tcgctttgtcgaaatccctataatgagttgcatttgcggctgccgaataaaccaacttta 224
              |||||||||||||||||||||||||| | |||||||| ||||||||||||||||||||||
Sbjct: 553553 tcgctttgtcgaaatccctataatgaatagcatttgctgctgccgaataaaccaacttta 553612

                                                                          
Query: 225    agatgggataagatgctcgatagggcatgaggttcagtatcataacagtttcctcgtagt 284
              |||||||||||||||||| ||| ||||||||| ||||||||||||| |||||||| ||||
Sbjct: 553613 agatgggataagatgctcaataaggcatgagggtcagtatcataacggtttcctcctagt 553672

                      
Query: 285    aacgccac 292
              || |||||
Sbjct: 553673 aaggccac 553680

---

>gb|DQ490951.1| Zea mays subsp. mays genotype CMS-S mitochondrion, complete genome
          Length = 569553

 Score =  182 bits (92), Expect = 9e-43
 Identities = 119/128 (92%)
 Strand = Plus / Plus

                                                                          
Query: 165    tcgctttgtcgaaatccctataatgagttgcatttgcggctgccgaataaaccaacttta 224
              |||||||||||||||||||||||||| | |||||||| ||||||||||||||||||||||
Sbjct: 456830 tcgctttgtcgaaatccctataatgaatagcatttgctgctgccgaataaaccaacttta 456889

                                                                          
Query: 225    agatgggataagatgctcgatagggcatgaggttcagtatcataacagtttcctcgtagt 284
              |||||||||||||||||| ||| ||||||||| ||||||||||||| |||||||| ||||
Sbjct: 456890 agatgggataagatgctcaataaggcatgagggtcagtatcataacggtttcctcctagt 456949

                      
Query: 285    aacgccac 292
              || |||||
Sbjct: 456950 aaggccac 456957

---

>gb|DQ490953.1| Zea mays subsp. mays genotype CMS-T mitochondrion, complete genome
          Length = 535825

 Score =  182 bits (92), Expect = 9e-43
 Identities = 119/128 (92%)
 Strand = Plus / Plus

                                                                          
Query: 165    tcgctttgtcgaaatccctataatgagttgcatttgcggctgccgaataaaccaacttta 224
              |||||||||||||||||||||||||| | |||||||| ||||||||||||||||||||||
Sbjct: 230065 tcgctttgtcgaaatccctataatgaatagcatttgctgctgccgaataaaccaacttta 230124

                                                                          
Query: 225    agatgggataagatgctcgatagggcatgaggttcagtatcataacagtttcctcgtagt 284
              |||||||||||||||||| ||| ||||||||| ||||||||||||| |||||||| ||||
Sbjct: 230125 agatgggataagatgctcaataaggcatgagggtcagtatcataacggtttcctcctagt 230184

                      
Query: 285    aacgccac 292
              || |||||
Sbjct: 230185 aaggccac 230192

---

>gb|DQ369792.1| Festuca occidentalis isolate 17 PsbA (psbA) gene, partial cds; and
           psbA-trnH intergenic spacer, partial sequence;
           chloroplast
          Length = 627

 Score =  182 bits (92), Expect = 9e-43
 Identities = 101/104 (97%)
 Strand = Plus / Plus

                                                                       
Query: 537 attcagaattcagttaacgacgagatttagtatcctttcttgcattttcataactcgtaa 596
           |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 174 attctgaattcagttaacgacgagatttagtatcctttcttgcattttcataactcgtga 233

                                                       
Query: 597 aatgccgagtaggcacgaattctcccaatttgcgacctaccata 640
           |||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 234 aatgccgagtaggcacgaattcccccaatttgcgacctaccata 277

---

>gb|DQ369758.1| Festuca valesiaca isolate 2 PsbA (psbA) gene, partial cds; and
           psbA-trnH intergenic spacer, partial sequence;
           chloroplast
          Length = 638

 Score =  182 bits (92), Expect = 9e-43
 Identities = 101/104 (97%)
 Strand = Plus / Plus

                                                                       
Query: 537 attcagaattcagttaacgacgagatttagtatcctttcttgcattttcataactcgtaa 596
           |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 175 attctgaattcagttaacgacgagatttagtatcctttcttgcattttcataactcgtga 234

                                                       
Query: 597 aatgccgagtaggcacgaattctcccaatttgcgacctaccata 640
           |||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 235 aatgccgagtaggcacgaattcccccaatttgcgacctaccata 278

---

>gb|AY769140.1| Paspalum maculosum psbA-trnH intergenic spacer, partial sequence;
           chloroplast
          Length = 538

 Score =  180 bits (91), Expect = 4e-42
 Identities = 113/119 (94%), Gaps = 1/119 (0%)
 Strand = Plus / Minus

                                                                       
Query: 523 ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttg-cat 581
           |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||| || 
Sbjct: 438 ttctgaatctttctattctgaattcagttaacgacgagatttagtatcctttcttggcac 379

                                                                      
Query: 582 tttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccata 640
           ||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 378 tttcataactcgtgaaatgccgagtaggcacgaattcccccaatttgcgacctaccata 320

---

>gb|AY769131.1| Paspalum ellipticum psbA-trnH intergenic spacer, partial sequence;
           chloroplast
          Length = 535

 Score =  180 bits (91), Expect = 4e-42
 Identities = 113/119 (94%), Gaps = 1/119 (0%)
 Strand = Plus / Minus

                                                                       
Query: 523 ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttg-cat 581
           |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||| || 
Sbjct: 438 ttctgaatctttctattctgaattcagttaacgacgagatttagtatcctttcttggcac 379

                                                                      
Query: 582 tttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccata 640
           ||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 378 tttcataactcgtgaaatgccgagtaggcacgaattcccccaatttgcgacctaccata 320

---

>gb|DQ369762.1| Festuca rubra isolate 4 PsbA (psbA) gene, partial cds; and
           psbA-trnH intergenic spacer, partial sequence;
           chloroplast
          Length = 633

 Score =  180 bits (91), Expect = 4e-42
 Identities = 97/99 (97%)
 Strand = Plus / Plus

                                                                       
Query: 542 gaattcagttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgc 601
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 175 gaattcagttaacgacgagatttagtatcctttcttgcattttcataactcgtgaaatgc 234

                                                  
Query: 602 cgagtaggcacgaattctcccaatttgcgacctaccata 640
           ||||||||||||||||| |||||||||||||||||||||
Sbjct: 235 cgagtaggcacgaattcccccaatttgcgacctaccata 273

---

>emb|Y00141.1|CHZMRP19 Maize chloroplast rps19 gene for ribosomal protein S19
          Length = 411

 Score =  178 bits (90), Expect = 1e-41
 Identities = 111/118 (94%)
 Strand = Plus / Minus

                                                                       
Query: 523 ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 582
           |||| ||||||||||||| ||||||| ||||||||||||||||||||||||||||| | |
Sbjct: 337 ttctgaatctttctattctgaattcaattaacgacgagatttagtatcctttcttgtact 278

                                                                     
Query: 583 ttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccata 640
           |||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 277 ttcataactcgtgaaatgccgagtaggcacgaattcccccaatttgcgacctaccata 220



 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 43/45 (95%)
 Strand = Plus / Minus

                                                        
Query: 463 acttgtcataaataagtttattccccgcctacctttactttattt 507
           |||||||||||||||| ||||| ||||||||||||||||||||||
Sbjct: 411 acttgtcataaataaggttattacccgcctacctttactttattt 367

---

>gb|AY941124.1| Axonopus rosengurttii psbA-trnH intergenic spacer, partial
           sequence; and rpl19 gene, complete cds; chloroplast
          Length = 494

 Score =  178 bits (90), Expect = 1e-41
 Identities = 111/118 (94%)
 Strand = Plus / Minus

                                                                       
Query: 523 ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 582
           |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
Sbjct: 407 ttctgaatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcact 348

                                                                     
Query: 583 ttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccata 640
           |||||||||||| ||||||||||||||||||||||| || |||||||| |||||||||
Sbjct: 347 ttcataactcgtgaaatgccgagtaggcacgaattcccctaatttgcgccctaccata 290

---

>gb|DQ006213.1| Arthraxon hispidus voucher Wells 5171 US PsbA (psbA) gene, partial
           cds; psbA-trnH intergenic spacer, complete sequence; and
           tRNA-His (trnH) gene, partial sequence; chloroplast
          Length = 614

 Score =  178 bits (90), Expect = 1e-41
 Identities = 111/118 (94%)
 Strand = Plus / Plus

                                                                       
Query: 523 ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 582
           |||| ||||||||||||| ||||||| ||||||||||||||||||||||||||||| | |
Sbjct: 150 ttctgaatctttctattctgaattcaattaacgacgagatttagtatcctttcttgtact 209

                                                                     
Query: 583 ttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccata 640
           |||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 210 ttcataactcgtgaaatgccgagtaggcacgaattcccccaatttgcgacctaccata 267

---

>emb|AL606447.3|OSJN00011 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0022F23,
             complete sequence
          Length = 130273

 Score =  176 bits (89), Expect = 6e-41
 Identities = 107/113 (94%)
 Strand = Plus / Plus

                                                                         
Query: 528   aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 587
             ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 72135 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 72194

                                                                  
Query: 588   aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccata 640
             ||||||| ||||||||||| || |||||||| |||||||||||||||||||||
Sbjct: 72195 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccata 72247

---

>gb|AF527485.1| Chloroplast transformation vector pVSR326, complete sequence
          Length = 9152

 Score =  176 bits (89), Expect = 6e-41
 Identities = 107/113 (94%)
 Strand = Plus / Plus

                                                                        
Query: 528  aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 587
            ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 4117 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 4176

                                                                 
Query: 588  aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccata 640
            ||||||| ||||||||||| || |||||||| |||||||||||||||||||||
Sbjct: 4177 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccata 4229

---

>gb|AC025783.10| Oryza sativa chromosome 10 BAC OSJNBa0001O14 genomic sequence, complete
             sequence
          Length = 178022

 Score =  176 bits (89), Expect = 6e-41
 Identities = 107/113 (94%)
 Strand = Plus / Plus

                                                                         
Query: 528   aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 587
             ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 79013 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 79072

                                                                  
Query: 588   aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccata 640
             ||||||| ||||||||||| || |||||||| |||||||||||||||||||||
Sbjct: 79073 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccata 79125

---

>gb|AC092750.2| Oryza sativa (japonica cultivar-group) cultivar Nipponbare from
             chromosome 10, complete sequence
          Length = 134933

 Score =  176 bits (89), Expect = 6e-41
 Identities = 107/113 (94%)
 Strand = Plus / Minus

                                                                         
Query: 528   aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 587
             ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 73206 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 73147

                                                                  
Query: 588   aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccata 640
             ||||||| ||||||||||| || |||||||| |||||||||||||||||||||
Sbjct: 73146 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccata 73094

---

>dbj|AB128665.1| Oryza nivara chloroplast DNA, containing SSR region (RCt12),
           strain:SL10
          Length = 335

 Score =  176 bits (89), Expect = 6e-41
 Identities = 107/113 (94%)
 Strand = Plus / Minus

                                                                       
Query: 528 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 587
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107

                                                                
Query: 588 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccata 640
           ||||||| ||||||||||| || |||||||| |||||||||||||||||||||
Sbjct: 106 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccata 54

---

>dbj|AB128664.1| Oryza eichingeri chloroplast DNA, containing SSR region (RCt12),
           strain:2001-SL8
          Length = 337

 Score =  176 bits (89), Expect = 6e-41
 Identities = 107/113 (94%)
 Strand = Plus / Minus

                                                                       
Query: 528 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 587
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107

                                                                
Query: 588 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccata 640
           ||||||| ||||||||||| || |||||||| |||||||||||||||||||||
Sbjct: 106 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccata 54

---

>dbj|AB128663.1| Oryza rhizomatis chloroplast DNA, containing SSR region (RCt12),
           strain:2001-SL3
          Length = 338

 Score =  176 bits (89), Expect = 6e-41
 Identities = 107/113 (94%)
 Strand = Plus / Minus

                                                                       
Query: 528 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 587
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107

                                                                
Query: 588 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccata 640
           ||||||| ||||||||||| || |||||||| |||||||||||||||||||||
Sbjct: 106 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccata 54

---

>dbj|AB128662.1| Oryza alta chloroplast DNA, containing SSR region (RCt12),
           strain:105138
          Length = 335

 Score =  176 bits (89), Expect = 6e-41
 Identities = 107/113 (94%)
 Strand = Plus / Minus

                                                                       
Query: 528 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 587
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107

                                                                
Query: 588 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccata 640
           ||||||| ||||||||||| || |||||||| |||||||||||||||||||||
Sbjct: 106 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccata 54

---

>dbj|AB128661.1| Oryza punctata chloroplast DNA, containing SSR region (RCt12),
           strain:104154
          Length = 333

 Score =  176 bits (89), Expect = 6e-41
 Identities = 107/113 (94%)
 Strand = Plus / Minus

                                                                       
Query: 528 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 587
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107

                                                                
Query: 588 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccata 640
           ||||||| ||||||||||| || |||||||| |||||||||||||||||||||
Sbjct: 106 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccata 54

---

>dbj|AB128660.1| Oryza glumipatula chloroplast DNA, containing SSR region (RCt12),
           strain:W2199
          Length = 336

 Score =  176 bits (89), Expect = 6e-41
 Identities = 107/113 (94%)
 Strand = Plus / Minus

                                                                       
Query: 528 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 587
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107

                                                                
Query: 588 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccata 640
           ||||||| ||||||||||| || |||||||| |||||||||||||||||||||
Sbjct: 106 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccata 54

---

>dbj|AB128659.1| Oryza glumipatula chloroplast DNA, containing SSR region (RCt12),
           strain:103812
          Length = 334

 Score =  176 bits (89), Expect = 6e-41
 Identities = 107/113 (94%)
 Strand = Plus / Minus

                                                                       
Query: 528 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 587
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107

                                                                
Query: 588 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccata 640
           ||||||| ||||||||||| || |||||||| |||||||||||||||||||||
Sbjct: 106 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccata 54

---

>dbj|AB128658.1| Oryza punctata chloroplast DNA, containing SSR region (RCt12),
           strain:103887
          Length = 333

 Score =  176 bits (89), Expect = 6e-41
 Identities = 107/113 (94%)
 Strand = Plus / Minus

                                                                       
Query: 528 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 587
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107

                                                                
Query: 588 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccata 640
           ||||||| ||||||||||| || |||||||| |||||||||||||||||||||
Sbjct: 106 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccata 54

---

>dbj|AB128656.1| Oryza australiensis chloroplast DNA, containing SSR region (RCt12),
           strain:105267
          Length = 338

 Score =  176 bits (89), Expect = 6e-41
 Identities = 107/113 (94%)
 Strand = Plus / Minus

                                                                       
Query: 528 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 587
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107

                                                                
Query: 588 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccata 640
           ||||||| ||||||||||| || |||||||| |||||||||||||||||||||
Sbjct: 106 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccata 54

---

>dbj|AB128655.1| Oryza australiensis chloroplast DNA, containing SSR region (RCt12),
           strain:103318
          Length = 338

 Score =  176 bits (89), Expect = 6e-41
 Identities = 107/113 (94%)
 Strand = Plus / Minus

                                                                       
Query: 528 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 587
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107

                                                                
Query: 588 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccata 640
           ||||||| ||||||||||| || |||||||| |||||||||||||||||||||
Sbjct: 106 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccata 54

---

>dbj|AB128654.1| Oryza australiensis chloroplast DNA, containing SSR region (RCt12),
           strain:101410
          Length = 338

 Score =  176 bits (89), Expect = 6e-41
 Identities = 107/113 (94%)
 Strand = Plus / Minus

                                                                       
Query: 528 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 587
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107

                                                                
Query: 588 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccata 640
           ||||||| ||||||||||| || |||||||| |||||||||||||||||||||
Sbjct: 106 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccata 54

---

>dbj|AB128653.1| Oryza australiensis chloroplast DNA, containing SSR region (RCt12),
           strain:101397
          Length = 338

 Score =  176 bits (89), Expect = 6e-41
 Identities = 107/113 (94%)
 Strand = Plus / Minus

                                                                       
Query: 528 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 587
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107

                                                                
Query: 588 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccata 640
           ||||||| ||||||||||| || |||||||| |||||||||||||||||||||
Sbjct: 106 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccata 54

---

>dbj|AB128652.1| Oryza meridionalis chloroplast DNA, containing SSR region (RCt12),
           strain:W1635
          Length = 336

 Score =  176 bits (89), Expect = 6e-41
 Identities = 107/113 (94%)
 Strand = Plus / Minus

                                                                       
Query: 528 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 587
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107

                                                                
Query: 588 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccata 640
           ||||||| ||||||||||| || |||||||| |||||||||||||||||||||
Sbjct: 106 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccata 54

---

>dbj|AB128651.1| Oryza meridionalis chloroplast DNA, containing SSR region (RCt12),
           strain:W1625
          Length = 334

 Score =  176 bits (89), Expect = 6e-41
 Identities = 107/113 (94%)
 Strand = Plus / Minus

                                                                       
Query: 528 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 587
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107

                                                                
Query: 588 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccata 640
           ||||||| ||||||||||| || |||||||| |||||||||||||||||||||
Sbjct: 106 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccata 54

---

>dbj|AB128650.1| Oryza punctata chloroplast DNA, containing SSR region (RCt12),
           strain:W1514
          Length = 333

 Score =  176 bits (89), Expect = 6e-41
 Identities = 107/113 (94%)
 Strand = Plus / Minus

                                                                       
Query: 528 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 587
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107

                                                                
Query: 588 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccata 640
           ||||||| ||||||||||| || |||||||| |||||||||||||||||||||
Sbjct: 106 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccata 54

---

>dbj|AB128649.1| Oryza glumipatula chloroplast DNA, containing SSR region (RCt12),
           strain:W1169
          Length = 334

 Score =  176 bits (89), Expect = 6e-41
 Identities = 107/113 (94%)
 Strand = Plus / Minus

                                                                       
Query: 528 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 587
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107

                                                                
Query: 588 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccata 640
           ||||||| ||||||||||| || |||||||| |||||||||||||||||||||
Sbjct: 106 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccata 54

---

>dbj|AB128648.1| Oryza barthii chloroplast DNA, containing SSR region (RCt12),
           strain:W0652
          Length = 335

 Score =  176 bits (89), Expect = 6e-41
 Identities = 107/113 (94%)
 Strand = Plus / Minus

                                                                       
Query: 528 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 587
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107

                                                                
Query: 588 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccata 640
           ||||||| ||||||||||| || |||||||| |||||||||||||||||||||
Sbjct: 106 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccata 54

---

>dbj|AB128647.1| Oryza rufipogon chloroplast DNA, containing SSR region (RCt12),
           strain:W0120
          Length = 336

 Score =  176 bits (89), Expect = 6e-41
 Identities = 107/113 (94%)
 Strand = Plus / Minus

                                                                       
Query: 528 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 587
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107

                                                                
Query: 588 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccata 640
           ||||||| ||||||||||| || |||||||| |||||||||||||||||||||
Sbjct: 106 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccata 54

---

>dbj|AB128646.1| Oryza longistaminata chloroplast DNA, containing SSR region
           (RCt12), strain:W1499
          Length = 337

 Score =  176 bits (89), Expect = 6e-41
 Identities = 107/113 (94%)
 Strand = Plus / Minus

                                                                       
Query: 528 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 587
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107

                                                                
Query: 588 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccata 640
           ||||||| ||||||||||| || |||||||| |||||||||||||||||||||
Sbjct: 106 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccata 54

---

>dbj|AB128645.1| Oryza glumipatula chloroplast DNA, containing SSR region (RCt12),
           strain:W1183
          Length = 336

 Score =  176 bits (89), Expect = 6e-41
 Identities = 107/113 (94%)
 Strand = Plus / Minus

                                                                       
Query: 528 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 587
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107

                                                                
Query: 588 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccata 640
           ||||||| ||||||||||| || |||||||| |||||||||||||||||||||
Sbjct: 106 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccata 54

---

>dbj|AB128644.1| Oryza rufipogon chloroplast DNA, containing SSR region (RCt12),
           strain:W2078
          Length = 334

 Score =  176 bits (89), Expect = 6e-41
 Identities = 107/113 (94%)
 Strand = Plus / Minus

                                                                       
Query: 528 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 587
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107

                                                                
Query: 588 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccata 640
           ||||||| ||||||||||| || |||||||| |||||||||||||||||||||
Sbjct: 106 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccata 54

---

>dbj|AB128643.1| Oryza longistaminata chloroplast DNA, containing SSR region
           (RCt12), strain:W1421
          Length = 337

 Score =  176 bits (89), Expect = 6e-41
 Identities = 107/113 (94%)
 Strand = Plus / Minus

                                                                       
Query: 528 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 587
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107

                                                                
Query: 588 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccata 640
           ||||||| ||||||||||| || |||||||| |||||||||||||||||||||
Sbjct: 106 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccata 54

---

>dbj|AB128642.1| Oryza rufipogon chloroplast DNA, containing SSR region (RCt12),
           strain:W2099
          Length = 334

 Score =  176 bits (89), Expect = 6e-41
 Identities = 107/113 (94%)
 Strand = Plus / Minus

                                                                       
Query: 528 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 587
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107

                                                                
Query: 588 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccata 640
           ||||||| ||||||||||| || |||||||| |||||||||||||||||||||
Sbjct: 106 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccata 54

---

>dbj|AB128641.1| Oryza longistaminata chloroplast DNA, containing SSR region
           (RCt12), strain:W1650
          Length = 337

 Score =  176 bits (89), Expect = 6e-41
 Identities = 107/113 (94%)
 Strand = Plus / Minus

                                                                       
Query: 528 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 587
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107

                                                                
Query: 588 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccata 640
           ||||||| ||||||||||| || |||||||| |||||||||||||||||||||
Sbjct: 106 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccata 54

---

>dbj|AB128640.1| Oryza sativa chloroplast DNA, containing SSR region (RCt12)
          Length = 336

 Score =  176 bits (89), Expect = 6e-41
 Identities = 107/113 (94%)
 Strand = Plus / Minus

                                                                       
Query: 528 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 587
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107

                                                                
Query: 588 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccata 640
           ||||||| ||||||||||| || |||||||| |||||||||||||||||||||
Sbjct: 106 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccata 54

---

>dbj|AB128639.1| Oryza rufipogon chloroplast DNA, containing SSR region (RCt12),
           strain:W0157
          Length = 335

 Score =  176 bits (89), Expect = 6e-41
 Identities = 107/113 (94%)
 Strand = Plus / Minus

                                                                       
Query: 528 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 587
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107

                                                                
Query: 588 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccata 640
           ||||||| ||||||||||| || |||||||| |||||||||||||||||||||
Sbjct: 106 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccata 54

---

>dbj|AB128638.1| Oryza glaberrima chloroplast DNA, containing SSR region (RCt12),
           strain:Tog5923
          Length = 335

 Score =  176 bits (89), Expect = 6e-41
 Identities = 107/113 (94%)
 Strand = Plus / Minus

                                                                       
Query: 528 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 587
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107

                                                                
Query: 588 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccata 640
           ||||||| ||||||||||| || |||||||| |||||||||||||||||||||
Sbjct: 106 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccata 54

---

>dbj|AB128637.1| Leersia tisserantii chloroplast DNA, containing SSR region (RCt12),
           strain:W1620
          Length = 332

 Score =  176 bits (89), Expect = 6e-41
 Identities = 107/113 (94%)
 Strand = Plus / Minus

                                                                       
Query: 528 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 587
           ||||||||| ||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 166 aatctttcttttctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107

                                                                
Query: 588 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccata 640
           ||||||| ||||| ||||||||||||||||| |||||||||||||||||||||
Sbjct: 106 aactcgtgaaatgacgagtaggcacgaattcccccaatttgcgacctaccata 54

---

>dbj|AB128636.1| Leersia tisserantii chloroplast DNA, containing SSR region (RCt12),
           strain:W1345
          Length = 332

 Score =  176 bits (89), Expect = 6e-41
 Identities = 107/113 (94%)
 Strand = Plus / Minus

                                                                       
Query: 528 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 587
           ||||||||| ||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 166 aatctttcttttctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107

                                                                
Query: 588 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccata 640
           ||||||| ||||| ||||||||||||||||| |||||||||||||||||||||
Sbjct: 106 aactcgtgaaatgacgagtaggcacgaattcccccaatttgcgacctaccata 54

---

>dbj|AB128635.1| Oryza latifolia chloroplast DNA, containing SSR region (RCt12),
           strain:W0048
          Length = 338

 Score =  176 bits (89), Expect = 6e-41
 Identities = 107/113 (94%)
 Strand = Plus / Minus

                                                                       
Query: 528 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 587
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107

                                                                
Query: 588 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccata 640
           ||||||| ||||||||||| || |||||||| |||||||||||||||||||||
Sbjct: 106 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccata 54

---

>dbj|AB128632.1| Oryza australiensis chloroplast DNA, containing SSR region (RCt12),
           strain:W1639
          Length = 338

 Score =  176 bits (89), Expect = 6e-41
 Identities = 107/113 (94%)
 Strand = Plus / Minus

                                                                       
Query: 528 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 587
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107

                                                                
Query: 588 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccata 640
           ||||||| ||||||||||| || |||||||| |||||||||||||||||||||
Sbjct: 106 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccata 54

---

>dbj|AB128627.1| Oryza grandiglumis chloroplast DNA, containing SSR region (RCt12),
           strain:W1480B
          Length = 335

 Score =  176 bits (89), Expect = 6e-41
 Identities = 107/113 (94%)
 Strand = Plus / Minus

                                                                       
Query: 528 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 587
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107

                                                                
Query: 588 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccata 640
           ||||||| ||||||||||| || |||||||| |||||||||||||||||||||
Sbjct: 106 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccata 54

---

>dbj|AB128626.1| Oryza alta chloroplast DNA, containing SSR region (RCt12),
           strain:W0018
          Length = 338

 Score =  176 bits (89), Expect = 6e-41
 Identities = 107/113 (94%)
 Strand = Plus / Minus

                                                                       
Query: 528 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 587
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107

                                                                
Query: 588 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccata 640
           ||||||| ||||||||||| || |||||||| |||||||||||||||||||||
Sbjct: 106 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccata 54

---

>dbj|AB128625.1| Oryza grandiglumis chloroplast DNA, containing SSR region (RCt12),
           strain:W0613
          Length = 335

 Score =  176 bits (89), Expect = 6e-41
 Identities = 107/113 (94%)
 Strand = Plus / Minus

                                                                       
Query: 528 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 587
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107

                                                                
Query: 588 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccata 640
           ||||||| ||||||||||| || |||||||| |||||||||||||||||||||
Sbjct: 106 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccata 54

---

>dbj|AB128624.1| Oryza punctata chloroplast DNA, containing SSR region (RCt12),
           strain:W1564
          Length = 337

 Score =  176 bits (89), Expect = 6e-41
 Identities = 107/113 (94%)
 Strand = Plus / Minus

                                                                       
Query: 528 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 587
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107

                                                                
Query: 588 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccata 640
           ||||||| ||||||||||| || |||||||| |||||||||||||||||||||
Sbjct: 106 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccata 54

---

>dbj|AB128623.1| Oryza punctata chloroplast DNA, containing SSR region (RCt12),
           strain:W0043
          Length = 338

 Score =  176 bits (89), Expect = 6e-41
 Identities = 107/113 (94%)
 Strand = Plus / Minus

                                                                       
Query: 528 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 587
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107

                                                                
Query: 588 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccata 640
           ||||||| ||||||||||| || |||||||| |||||||||||||||||||||
Sbjct: 106 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccata 54

---

>dbj|AB128622.1| Oryza eichingeri chloroplast DNA, containing SSR region (RCt12),
           strain:W1525
          Length = 338

 Score =  176 bits (89), Expect = 6e-41
 Identities = 107/113 (94%)
 Strand = Plus / Minus

                                                                       
Query: 528 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 587
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107

                                                                
Query: 588 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccata 640
           ||||||| ||||||||||| || |||||||| |||||||||||||||||||||
Sbjct: 106 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccata 54

---

>dbj|AB128621.1| Oryza officinalis chloroplast DNA, containing SSR region (RCt12),
           strain:W0614
          Length = 338

 Score =  176 bits (89), Expect = 6e-41
 Identities = 107/113 (94%)
 Strand = Plus / Minus

                                                                       
Query: 528 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 587
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107

                                                                
Query: 588 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccata 640
           ||||||| ||||||||||| || |||||||| |||||||||||||||||||||
Sbjct: 106 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccata 54

---

>dbj|AB128620.1| Oryza officinalis chloroplast DNA, containing SSR region (RCt12),
           strain:NIAS WBC6
          Length = 338

 Score =  176 bits (89), Expect = 6e-41
 Identities = 107/113 (94%)
 Strand = Plus / Minus

                                                                       
Query: 528 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 587
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107

                                                                
Query: 588 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccata 640
           ||||||| ||||||||||| || |||||||| |||||||||||||||||||||
Sbjct: 106 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccata 54

---

>dbj|AB128619.1| Oryza punctata chloroplast DNA, containing SSR region (RCt12),
           strain:W0015
          Length = 338

 Score =  176 bits (89), Expect = 6e-41
 Identities = 107/113 (94%)
 Strand = Plus / Minus

                                                                       
Query: 528 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 587
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107

                                                                
Query: 588 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccata 640
           ||||||| ||||||||||| || |||||||| |||||||||||||||||||||
Sbjct: 106 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccata 54

---

>dbj|AB128618.1| Oryza minuta chloroplast DNA, containing SSR region (RCt12),
           strain:W1213
          Length = 338

 Score =  176 bits (89), Expect = 6e-41
 Identities = 107/113 (94%)
 Strand = Plus / Minus

                                                                       
Query: 528 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 587
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107

                                                                
Query: 588 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccata 640
           ||||||| ||||||||||| || |||||||| |||||||||||||||||||||
Sbjct: 106 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccata 54

---

>dbj|AB128617.1| Oryza latifolia chloroplast DNA, containing SSR region (RCt12),
           strain:W1181
          Length = 338

 Score =  176 bits (89), Expect = 6e-41
 Identities = 107/113 (94%)
 Strand = Plus / Minus

                                                                       
Query: 528 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 587
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107

                                                                
Query: 588 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccata 640
           ||||||| ||||||||||| || |||||||| |||||||||||||||||||||
Sbjct: 106 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccata 54

---

>dbj|AB128616.1| Oryza minuta chloroplast DNA, containing SSR region (RCt12),
           strain:W1337
          Length = 338

 Score =  176 bits (89), Expect = 6e-41
 Identities = 107/113 (94%)
 Strand = Plus / Minus

                                                                       
Query: 528 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 587
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107

                                                                
Query: 588 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccata 640
           ||||||| ||||||||||| || |||||||| |||||||||||||||||||||
Sbjct: 106 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccata 54

---

>dbj|AB128615.1| Oryza officinalis chloroplast DNA, containing SSR region (RCt12),
           strain:W0002
          Length = 338

 Score =  176 bits (89), Expect = 6e-41
 Identities = 107/113 (94%)
 Strand = Plus / Minus

                                                                       
Query: 528 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 587
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107

                                                                
Query: 588 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccata 640
           ||||||| ||||||||||| || |||||||| |||||||||||||||||||||
Sbjct: 106 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccata 54

---

>gb|M22826.1|RICCPRPL Oryza sativa chloroplast ribosomal protein (rpL23, rpL2 and rpS190)
            genes, complete cds, ribosomal protein L22 (rpL22) gene,
            5' end, transfer RNA-Ile and -His genes
          Length = 2789

 Score =  176 bits (89), Expect = 6e-41
 Identities = 107/113 (94%)
 Strand = Plus / Minus

                                                                        
Query: 528  aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 587
            ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 2613 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 2554

                                                                 
Query: 588  aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccata 640
            ||||||| ||||||||||| || |||||||| |||||||||||||||||||||
Sbjct: 2553 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccata 2501



 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 56/61 (91%)
 Strand = Plus / Minus

                                                                        
Query: 436  cctagggatatactttactagtttgaaacttgtcataaataagtttattccccgcctacc 495
            ||||||| |||||||||| | |||||||||||||||||||||| ||||||||||| ||||
Sbjct: 2789 cctaggggtatactttaccaatttgaaacttgtcataaataaggttattccccgcttacc 2730

             
Query: 496  t 496
            |
Sbjct: 2729 t 2729

---

>dbj|AP006052.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBa0067K15
          Length = 160162

 Score =  176 bits (89), Expect = 6e-41
 Identities = 107/113 (94%)
 Strand = Plus / Minus

                                                                         
Query: 528   aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 587
             ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 76026 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 75967

                                                                  
Query: 588   aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccata 640
             ||||||| ||||||||||| || |||||||| |||||||||||||||||||||
Sbjct: 75966 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccata 75914

---

>dbj|AP005483.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:B1144B06
          Length = 133689

 Score =  176 bits (89), Expect = 6e-41
 Identities = 107/113 (94%)
 Strand = Plus / Plus

                                                                         
Query: 528   aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 587
             ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 15495 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 15554

                                                                  
Query: 588   aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccata 640
             ||||||| ||||||||||| || |||||||| |||||||||||||||||||||
Sbjct: 15555 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccata 15607

---

>dbj|AP004662.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0048G02
          Length = 155542

 Score =  176 bits (89), Expect = 6e-41
 Identities = 107/113 (94%)
 Strand = Plus / Plus

                                                                          
Query: 528    aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 587
              ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 134888 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 134947

                                                                   
Query: 588    aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccata 640
              ||||||| ||||||||||| || |||||||| |||||||||||||||||||||
Sbjct: 134948 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccata 135000

---

>dbj|AK059477.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-028-F01, full
            insert sequence
          Length = 1123

 Score =  176 bits (89), Expect = 6e-41
 Identities = 107/113 (94%)
 Strand = Plus / Minus

                                                                        
Query: 528  aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 587
            ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 1117 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 1058

                                                                 
Query: 588  aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccata 640
            ||||||| ||||||||||| || |||||||| |||||||||||||||||||||
Sbjct: 1057 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccata 1005

---

>gb|L40578.1|RICCPRPM Oryza sativa chloroplast ribosomal protein (rpL23, rpL2 and rpS190)
            genes, complete cds, transfer RNA-Ile and -His genes and
            photosystem II (psbA) gene, 3' end
          Length = 2799

 Score =  176 bits (89), Expect = 6e-41
 Identities = 107/113 (94%)
 Strand = Plus / Minus

                                                                        
Query: 528  aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 587
            ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 2613 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 2554

                                                                 
Query: 588  aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccata 640
            ||||||| ||||||||||| || |||||||| |||||||||||||||||||||
Sbjct: 2553 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccata 2501

---

>gb|DQ369790.1| Festuca roemeri isolate 16 PsbA (psbA) gene, partial cds; and
           psbA-trnH intergenic spacer, partial sequence;
           chloroplast
          Length = 638

 Score =  174 bits (88), Expect = 2e-40
 Identities = 100/104 (96%)
 Strand = Plus / Plus

                                                                       
Query: 537 attcagaattcagttaacgacgagatttagtatcctttcttgcattttcataactcgtaa 596
           |||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| |
Sbjct: 175 attctgaattcagttaacggcgagatttagtatcctttcttgcattttcataactcgtga 234

                                                       
Query: 597 aatgccgagtaggcacgaattctcccaatttgcgacctaccata 640
           |||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 235 aatgccgagtaggcacgaattcccccaatttgcgacctaccata 278

---

>gb|DQ369788.1| Festuca roemeri isolate 15 PsbA (psbA) gene, partial cds; and
           psbA-trnH intergenic spacer, partial sequence;
           chloroplast
          Length = 638

 Score =  174 bits (88), Expect = 2e-40
 Identities = 100/104 (96%)
 Strand = Plus / Plus

                                                                       
Query: 537 attcagaattcagttaacgacgagatttagtatcctttcttgcattttcataactcgtaa 596
           |||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| |
Sbjct: 175 attctgaattcagttaacggcgagatttagtatcctttcttgcattttcataactcgtga 234

                                                       
Query: 597 aatgccgagtaggcacgaattctcccaatttgcgacctaccata 640
           |||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 235 aatgccgagtaggcacgaattcccccaatttgcgacctaccata 278

---

>gb|DQ369786.1| Festuca roemeri isolate 14 PsbA (psbA) gene, partial cds; and
           psbA-trnH intergenic spacer, partial sequence;
           chloroplast
          Length = 638

 Score =  174 bits (88), Expect = 2e-40
 Identities = 100/104 (96%)
 Strand = Plus / Plus

                                                                       
Query: 537 attcagaattcagttaacgacgagatttagtatcctttcttgcattttcataactcgtaa 596
           |||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| |
Sbjct: 175 attctgaattcagttaacggcgagatttagtatcctttcttgcattttcataactcgtga 234

                                                       
Query: 597 aatgccgagtaggcacgaattctcccaatttgcgacctaccata 640
           |||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 235 aatgccgagtaggcacgaattcccccaatttgcgacctaccata 278

---

>gb|DQ369784.1| Festuca roemeri isolate 13 PsbA (psbA) gene, partial cds; and
           psbA-trnH intergenic spacer, partial sequence;
           chloroplast
          Length = 638

 Score =  174 bits (88), Expect = 2e-40
 Identities = 100/104 (96%)
 Strand = Plus / Plus

                                                                       
Query: 537 attcagaattcagttaacgacgagatttagtatcctttcttgcattttcataactcgtaa 596
           |||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| |
Sbjct: 175 attctgaattcagttaacggcgagatttagtatcctttcttgcattttcataactcgtga 234

                                                       
Query: 597 aatgccgagtaggcacgaattctcccaatttgcgacctaccata 640
           |||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 235 aatgccgagtaggcacgaattcccccaatttgcgacctaccata 278

---

>gb|DQ369782.1| Festuca roemeri isolate 12 PsbA (psbA) gene, partial cds; and
           psbA-trnH intergenic spacer, partial sequence;
           chloroplast
          Length = 638

 Score =  174 bits (88), Expect = 2e-40
 Identities = 100/104 (96%)
 Strand = Plus / Plus

                                                                       
Query: 537 attcagaattcagttaacgacgagatttagtatcctttcttgcattttcataactcgtaa 596
           |||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| |
Sbjct: 175 attctgaattcagttaacggcgagatttagtatcctttcttgcattttcataactcgtga 234

                                                       
Query: 597 aatgccgagtaggcacgaattctcccaatttgcgacctaccata 640
           |||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 235 aatgccgagtaggcacgaattcccccaatttgcgacctaccata 278

---

>gb|DQ369780.1| Festuca roemeri isolate 11 PsbA (psbA) gene, partial cds; and
           psbA-trnH intergenic spacer, partial sequence;
           chloroplast
          Length = 638

 Score =  174 bits (88), Expect = 2e-40
 Identities = 100/104 (96%)
 Strand = Plus / Plus

                                                                       
Query: 537 attcagaattcagttaacgacgagatttagtatcctttcttgcattttcataactcgtaa 596
           |||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| |
Sbjct: 175 attctgaattcagttaacggcgagatttagtatcctttcttgcattttcataactcgtga 234

                                                       
Query: 597 aatgccgagtaggcacgaattctcccaatttgcgacctaccata 640
           |||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 235 aatgccgagtaggcacgaattcccccaatttgcgacctaccata 278

---

>gb|DQ369778.1| Festuca idahoensis isolate 10 PsbA (psbA) gene, partial cds; and
           psbA-trnH intergenic spacer, partial sequence;
           chloroplast
          Length = 638

 Score =  174 bits (88), Expect = 2e-40
 Identities = 100/104 (96%)
 Strand = Plus / Plus

                                                                       
Query: 537 attcagaattcagttaacgacgagatttagtatcctttcttgcattttcataactcgtaa 596
           |||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| |
Sbjct: 175 attctgaattcagttaacggcgagatttagtatcctttcttgcattttcataactcgtga 234

                                                       
Query: 597 aatgccgagtaggcacgaattctcccaatttgcgacctaccata 640
           |||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 235 aatgccgagtaggcacgaattcccccaatttgcgacctaccata 278

---

>gb|DQ369776.1| Festuca valesiaca isolate 9 PsbA (psbA) gene, partial cds; and
           psbA-trnH intergenic spacer, partial sequence;
           chloroplast
          Length = 638

 Score =  174 bits (88), Expect = 2e-40
 Identities = 100/104 (96%)
 Strand = Plus / Plus

                                                                       
Query: 537 attcagaattcagttaacgacgagatttagtatcctttcttgcattttcataactcgtaa 596
           |||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
Sbjct: 175 attctgaattcagttaacgacgagatttagtatcttttcttgcattttcataactcgtga 234

                                                       
Query: 597 aatgccgagtaggcacgaattctcccaatttgcgacctaccata 640
           |||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 235 aatgccgagtaggcacgaattcccccaatttgcgacctaccata 278

---

>gb|DQ369774.1| Festuca idahoensis isolate 8 PsbA (psbA) gene, partial cds; and
           psbA-trnH intergenic spacer, partial sequence;
           chloroplast
          Length = 638

 Score =  174 bits (88), Expect = 2e-40
 Identities = 100/104 (96%)
 Strand = Plus / Plus

                                                                       
Query: 537 attcagaattcagttaacgacgagatttagtatcctttcttgcattttcataactcgtaa 596
           |||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| |
Sbjct: 175 attctgaattcagttaacggcgagatttagtatcctttcttgcattttcataactcgtga 234

                                                       
Query: 597 aatgccgagtaggcacgaattctcccaatttgcgacctaccata 640
           |||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 235 aatgccgagtaggcacgaattcccccaatttgcgacctaccata 278

---

>gb|DQ369772.1| Festuca roemeri isolate 7.2 PsbA (psbA) gene, partial cds; and
           psbA-trnH intergenic spacer, partial sequence;
           chloroplast
          Length = 638

 Score =  174 bits (88), Expect = 2e-40
 Identities = 100/104 (96%)
 Strand = Plus / Plus

                                                                       
Query: 537 attcagaattcagttaacgacgagatttagtatcctttcttgcattttcataactcgtaa 596
           |||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| |
Sbjct: 175 attctgaattcagttaacggcgagatttagtatcctttcttgcattttcataactcgtga 234

                                                       
Query: 597 aatgccgagtaggcacgaattctcccaatttgcgacctaccata 640
           |||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 235 aatgccgagtaggcacgaattcccccaatttgcgacctaccata 278

---

>gb|DQ369770.1| Festuca idahoensis isolate 7.1 PsbA (psbA) gene, partial cds; and
           psbA-trnH intergenic spacer, partial sequence;
           chloroplast
          Length = 638

 Score =  174 bits (88), Expect = 2e-40
 Identities = 100/104 (96%)
 Strand = Plus / Plus

                                                                       
Query: 537 attcagaattcagttaacgacgagatttagtatcctttcttgcattttcataactcgtaa 596
           |||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| |
Sbjct: 175 attctgaattcagttaacggcgagatttagtatcctttcttgcattttcataactcgtga 234

                                                       
Query: 597 aatgccgagtaggcacgaattctcccaatttgcgacctaccata 640
           |||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 235 aatgccgagtaggcacgaattcccccaatttgcgacctaccata 278

---

>gb|DQ369768.1| Festuca roemeri isolate 6.2 PsbA (psbA) gene, partial cds; and
           psbA-trnH intergenic spacer, partial sequence;
           chloroplast
          Length = 638

 Score =  174 bits (88), Expect = 2e-40
 Identities = 100/104 (96%)
 Strand = Plus / Plus

                                                                       
Query: 537 attcagaattcagttaacgacgagatttagtatcctttcttgcattttcataactcgtaa 596
           |||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| |
Sbjct: 175 attctgaattcagttaacggcgagatttagtatcctttcttgcattttcataactcgtga 234

                                                       
Query: 597 aatgccgagtaggcacgaattctcccaatttgcgacctaccata 640
           |||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 235 aatgccgagtaggcacgaattcccccaatttgcgacctaccata 278

---

>gb|DQ369766.1| Festuca idahoensis isolate 6.1 PsbA (psbA) gene, partial cds; and
           psbA-trnH intergenic spacer, partial sequence;
           chloroplast
          Length = 638

 Score =  174 bits (88), Expect = 2e-40
 Identities = 100/104 (96%)
 Strand = Plus / Plus

                                                                       
Query: 537 attcagaattcagttaacgacgagatttagtatcctttcttgcattttcataactcgtaa 596
           |||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| |
Sbjct: 175 attctgaattcagttaacggcgagatttagtatcctttcttgcattttcataactcgtga 234

                                                       
Query: 597 aatgccgagtaggcacgaattctcccaatttgcgacctaccata 640
           |||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 235 aatgccgagtaggcacgaattcccccaatttgcgacctaccata 278

---

>gb|AY769121.1| Axonopus polystachyus psbA-trnH intergenic spacer, partial
           sequence; chloroplast
          Length = 535

 Score =  170 bits (86), Expect = 4e-39
 Identities = 110/118 (93%)
 Strand = Plus / Minus

                                                                       
Query: 523 ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 582
           |||| ||| ||||||||| ||||||||||||||||||||||||||||||||||||||| |
Sbjct: 436 ttctgaatgtttctattctgaattcagttaacgacgagatttagtatcctttcttgcact 377

                                                                     
Query: 583 ttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccata 640
           |||||||||||| ||||||||||||||||||||||| || |||||||| |||||||||
Sbjct: 376 ttcataactcgtgaaatgccgagtaggcacgaattcccctaatttgcgccctaccata 319

---

>gb|AY769119.1| Axonopus compressus psbA-trnH intergenic spacer, partial sequence;
           chloroplast
          Length = 533

 Score =  170 bits (86), Expect = 4e-39
 Identities = 110/118 (93%)
 Strand = Plus / Minus

                                                                       
Query: 523 ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 582
           |||| ||| ||||||||| ||||||||||||||||||||||||||||||||||||||| |
Sbjct: 438 ttctgaatgtttctattctgaattcagttaacgacgagatttagtatcctttcttgcact 379

                                                                     
Query: 583 ttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccata 640
           |||||||||||| ||||||||||||||||||||||| || |||||||| |||||||||
Sbjct: 378 ttcataactcgtgaaatgccgagtaggcacgaattcccctaatttgcgccctaccata 321

---

>gb|AY769117.1| Axonopus argentinus psbA-trnH intergenic spacer, partial sequence;
           chloroplast
          Length = 535

 Score =  170 bits (86), Expect = 4e-39
 Identities = 110/118 (93%)
 Strand = Plus / Minus

                                                                       
Query: 523 ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 582
           |||| ||| ||||||||| ||||||||||||||||||||||||||||||||||||||| |
Sbjct: 438 ttctgaatgtttctattctgaattcagttaacgacgagatttagtatcctttcttgcact 379

                                                                     
Query: 583 ttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccata 640
           |||||||||||| ||||||||||||||||||||||| || |||||||| |||||||||
Sbjct: 378 ttcataactcgtgaaatgccgagtaggcacgaattcccctaatttgcgccctaccata 321

---

>emb|AL732650.5|CNS08C9P Oryza sativa chromosome 12, . BAC OSJNBa0054O08 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 167806

 Score =  168 bits (85), Expect = 1e-38
 Identities = 106/113 (93%)
 Strand = Plus / Minus

                                                                          
Query: 528    aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 587
              ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 124833 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 124774

                                                                   
Query: 588    aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccata 640
              ||||||| ||||||||||| || |||||||| |||||||||||||||| ||||
Sbjct: 124773 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctatcata 124721

---

>gb|AY769129.1| Paspalum dedeccae psbA-trnH intergenic spacer, partial sequence;
           chloroplast
          Length = 543

 Score =  167 bits (84), Expect = 6e-38
 Identities = 111/119 (93%), Gaps = 1/119 (0%)
 Strand = Plus / Minus

                                                                       
Query: 523 ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 582
           |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
Sbjct: 442 ttctgaatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcact 383

                                                                      
Query: 583 ttcataactcgtaaaatgccgagtaggcacgaattctcccaatt-tgcgacctaccata 640
           |||||||||||| ||||||||||||||||||||| | |||||||  |||||||||||||
Sbjct: 382 ttcataactcgtgaaatgccgagtaggcacgaatncccccaattaagcgacctaccata 324

---

>gb|DQ369764.1| Festuca idahoensis isolate 5 PsbA (psbA) gene, partial cds; and
           psbA-trnH intergenic spacer, partial sequence;
           chloroplast
          Length = 638

 Score =  167 bits (84), Expect = 6e-38
 Identities = 99/104 (95%)
 Strand = Plus / Plus

                                                                       
Query: 537 attcagaattcagttaacgacgagatttagtatcctttcttgcattttcataactcgtaa 596
           |||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| |
Sbjct: 175 attctgaattcagttaacggcgagatttagtatcctttcttgcattttcataactcgtga 234

                                                       
Query: 597 aatgccgagtaggcacgaattctcccaatttgcgacctaccata 640
           |||||||||||||||||||||| |||||||||||||| ||||||
Sbjct: 235 aatgccgagtaggcacgaattcccccaatttgcgacccaccata 278

---

>gb|AY769144.1| Paspalum pauciciliatum psbA-trnH intergenic spacer, partial
           sequence; chloroplast
          Length = 538

 Score =  157 bits (79), Expect = 5e-35
 Identities = 95/99 (95%), Gaps = 1/99 (1%)
 Strand = Plus / Minus

                                                                       
Query: 542 gaattcagttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgc 601
           ||||||||| ||||||||||||||||||||||||||||| ||||||||||||| ||||||
Sbjct: 414 gaattcagt-aacgacgagatttagtatcctttcttgcactttcataactcgtgaaatgc 356

                                                  
Query: 602 cgagtaggcacgaattctcccaatttgcgacctaccata 640
           ||||||||||||||||| |||||||||||||||||||||
Sbjct: 355 cgagtaggcacgaattcccccaatttgcgacctaccata 317

---

>gb|AY769118.1| Axonopus brasiliensis psbA-trnH intergenic spacer, partial
           sequence; chloroplast
          Length = 537

 Score =  157 bits (79), Expect = 5e-35
 Identities = 110/119 (92%), Gaps = 1/119 (0%)
 Strand = Plus / Minus

                                                                       
Query: 523 ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttctt-gcat 581
           |||| ||| ||||||||| |||||||||||||||||||||||||||||||||||| ||| 
Sbjct: 441 ttctgaatgtttctattctgaattcagttaacgacgagatttagtatcctttcttggcac 382

                                                                      
Query: 582 tttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccata 640
           ||||||||||||| ||||||||||||||||||||||| || |||||||| |||||||||
Sbjct: 381 tttcataactcgtgaaatgccgagtaggcacgaattcccctaatttgcgccctaccata 323

---

>dbj|AB128657.1| Oryza brachyantha chloroplast DNA, containing SSR region (RCt12),
           strain:101232
          Length = 338

 Score =  151 bits (76), Expect = 3e-33
 Identities = 91/96 (94%)
 Strand = Plus / Minus

                                                                       
Query: 545 ttcagttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgccga 604
           |||||||||||||||||||||||||| ||||||||| ||||||||||||| |||||||||
Sbjct: 149 ttcagttaacgacgagatttagtatcttttcttgcactttcataactcgtgaaatgccga 90

                                               
Query: 605 gtaggcacgaattctcccaatttgcgacctaccata 640
           |||||||| ||||| |||||||||||||||||||||
Sbjct: 89  gtaggcacaaattcccccaatttgcgacctaccata 54

---

>gb|AY769120.1| Axonopus siccus psbA-trnH intergenic spacer, partial sequence;
           chloroplast
          Length = 536

 Score =  149 bits (75), Expect = 1e-32
 Identities = 109/119 (91%), Gaps = 1/119 (0%)
 Strand = Plus / Minus

                                                                       
Query: 523 ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttg-cat 581
           |||| ||| ||||||||  ||||||||||||||||||||||||||||||||||||| || 
Sbjct: 438 ttctgaatgtttctattttgaattcagttaacgacgagatttagtatcctttcttggcac 379

                                                                      
Query: 582 tttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccata 640
           ||||||||||||| ||||||||||||||||||||||| || |||||||| |||||||||
Sbjct: 378 tttcataactcgtgaaatgccgagtaggcacgaattcccctaatttgcgccctaccata 320

---

>emb|AL731585.5| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0009K15,
             complete sequence
          Length = 185021

 Score =  141 bits (71), Expect = 3e-30
 Identities = 86/91 (94%)
 Strand = Plus / Minus

                                                                         
Query: 210   aataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatcataa 269
             ||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||
Sbjct: 34272 aataaaccaactttaagatgggataagatgctcgatatggcatgaggttcaatatcataa 34213

                                            
Query: 270   cagtttcctcgtagtaacgccaccgaatctc 300
              |||||| |||||||||||||| ||||||||
Sbjct: 34212 tagtttcttcgtagtaacgccaacgaatctc 34182

---

>emb|AJ316582.1|ABE316582 Atropa belladonna complete chloroplast genome, strain Ab5p(kan)
          Length = 156687

 Score =  133 bits (67), Expect = 8e-28
 Identities = 169/203 (83%)
 Strand = Plus / Plus

                                                                         
Query: 86    aaactacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcg 145
             |||||||||||||||||||||||| | |||||||||| | | |||| || | ||||||||
Sbjct: 86299 aaactacgtcctcgagctcgaggtttcaatttcttcacagtcgtacccccattgacttcg 86358

                                                                         
Query: 146   gctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggct 205
             |||||| |||||| |||||| |||| |  | || || ||| || | | |||||||| |||
Sbjct: 86359 gctttactaatgactaaattggcttcgctggaacccatattataactagcatttgctgct 86418

                                                                         
Query: 206   gccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatc 265
             || ||||||||||| || || ||||||||| ||||||||||||||||||| |  ||||||
Sbjct: 86419 gcagaataaaccaatttcaaaatgggataacatgctcgatagggcatgagttctagtatc 86478

                                    
Query: 266   ataacagtttcctcgtagtaacg 288
             ||||  |||||||| ||| ||||
Sbjct: 86479 ataagcgtttcctcataggaacg 86501

---

>emb|Z00044.2|CHNTXX Nicotiana tabacum chloroplast genome DNA
          Length = 155943

 Score =  117 bits (59), Expect = 5e-23
 Identities = 167/203 (82%)
 Strand = Plus / Plus

                                                                         
Query: 86    aaactacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcg 145
             |||||||||||||||||||||||| | |||||||||| | ||||||  | | ||||||||
Sbjct: 86052 aaactacgtcctcgagctcgaggtttcaatttcttcacagtagtacctccattgacttcg 86111

                                                                         
Query: 146   gctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggct 205
             |||||| |||||| |||||| |||| |  | || || |||  | | | |||||||| |||
Sbjct: 86112 gctttactaatgactaaattggcttcgctggaacccatattgtaactagcatttgctgct 86171

                                                                         
Query: 206   gccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatc 265
             || ||||||| ||| || || ||||||||| ||||||||||||||||||| |  ||||||
Sbjct: 86172 gcagaataaatcaatttcaaaatgggataacatgctcgatagggcatgagttctagtatc 86231

                                    
Query: 266   ataacagtttcctcgtagtaacg 288
             ||||  |||||||| ||| ||||
Sbjct: 86232 ataagcgtttcctcataggaacg 86254

---

>gb|DQ386163.1| Solanum tuberosum cultivar Desiree chloroplast, complete genome
          Length = 155298

 Score =  117 bits (59), Expect = 5e-23
 Identities = 167/203 (82%)
 Strand = Plus / Plus

                                                                         
Query: 86    aaactacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcg 145
             |||||||||||||||||||||||| | |||||||||| | ||||||    | ||||||||
Sbjct: 85177 aaactacgtcctcgagctcgaggtttcaatttcttcacagtagtaccttcattgacttcg 85236

                                                                         
Query: 146   gctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggct 205
             |||||| |||||| |||||| | || || | || || |||  | | | |||||||| |||
Sbjct: 85237 gctttactaatgactaaattggtttcgttggaacccatattgtaactagcatttgctgct 85296

                                                                         
Query: 206   gccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatc 265
             || ||||||||||| || || ||||||||| ||||||||||||||||||| |  ||||||
Sbjct: 85297 gcagaataaaccaatttcaaaatgggataacatgctcgatagggcatgagttctagtatc 85356

                                    
Query: 266   ataacagtttcctcgtagtaacg 288
             ||||  |||||||| ||| ||||
Sbjct: 85357 ataagcgtttcctcataggaacg 85379

---

>dbj|AB237912.1| Nicotiana sylvestris chloroplast DNA, complete sequence
          Length = 155941

 Score =  117 bits (59), Expect = 5e-23
 Identities = 167/203 (82%)
 Strand = Plus / Plus

                                                                         
Query: 86    aaactacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcg 145
             |||||||||||||||||||||||| | |||||||||| | ||||||  | | ||||||||
Sbjct: 86050 aaactacgtcctcgagctcgaggtttcaatttcttcacagtagtacctccattgacttcg 86109

                                                                         
Query: 146   gctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggct 205
             |||||| |||||| |||||| |||| |  | || || |||  | | | |||||||| |||
Sbjct: 86110 gctttactaatgactaaattggcttcgctggaacccatattgtaactagcatttgctgct 86169

                                                                         
Query: 206   gccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatc 265
             || ||||||| ||| || || ||||||||| ||||||||||||||||||| |  ||||||
Sbjct: 86170 gcagaataaatcaatttcaaaatgggataacatgctcgatagggcatgagttctagtatc 86229

                                    
Query: 266   ataacagtttcctcgtagtaacg 288
             ||||  |||||||| ||| ||||
Sbjct: 86230 ataagcgtttcctcataggaacg 86252

---

>dbj|AB240139.1| Nicotiana tomentosiformis chloroplast DNA, complete sequence
          Length = 155745

 Score =  117 bits (59), Expect = 5e-23
 Identities = 167/203 (82%)
 Strand = Plus / Plus

                                                                         
Query: 86    aaactacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcg 145
             |||||||||||||||||||||||| | |||||||||| | ||||||  | | ||||||||
Sbjct: 85821 aaactacgtcctcgagctcgaggtttcaatttcttcacagtagtacctccattgacttcg 85880

                                                                         
Query: 146   gctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggct 205
             |||||| |||||| |||||| |||| |  | || || |||  | | | |||||||| |||
Sbjct: 85881 gctttactaatgactaaattggcttcgctggaacccatattgtaactagcatttgctgct 85940

                                                                         
Query: 206   gccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatc 265
             || ||||||||||| || || ||||||||| |||| |||||||||||||| |  ||||||
Sbjct: 85941 gcagaataaaccaatttcaaaatgggataacatgcccgatagggcatgagttctagtatc 86000

                                    
Query: 266   ataacagtttcctcgtagtaacg 288
             ||||  |||||||| ||| ||||
Sbjct: 86001 ataagcgtttcctcataggaacg 86023

---

>gb|DQ231562.1| Solanum tuberosum chloroplast, complete genome
          Length = 155312

 Score =  117 bits (59), Expect = 5e-23
 Identities = 167/203 (82%)
 Strand = Plus / Plus

                                                                         
Query: 86    aaactacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcg 145
             |||||||||||||||||||||||| | |||||||||| | ||||||    | ||||||||
Sbjct: 85189 aaactacgtcctcgagctcgaggtttcaatttcttcacagtagtaccttcattgacttcg 85248

                                                                         
Query: 146   gctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggct 205
             |||||| |||||| |||||| | || || | || || |||  | | | |||||||| |||
Sbjct: 85249 gctttactaatgactaaattggtttcgttggaacccatattgtaactagcatttgctgct 85308

                                                                         
Query: 206   gccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatc 265
             || ||||||||||| || || ||||||||| ||||||||||||||||||| |  ||||||
Sbjct: 85309 gcagaataaaccaatttcaaaatgggataacatgctcgatagggcatgagttctagtatc 85368

                                    
Query: 266   ataacagtttcctcgtagtaacg 288
             ||||  |||||||| ||| ||||
Sbjct: 85369 ataagcgtttcctcataggaacg 85391

---

>gb|AY727185.1| Pseudotrillium rivale psbA-trnH intergenic spacer, partial
           sequence; chloroplast
          Length = 1015

 Score =  111 bits (56), Expect = 3e-21
 Identities = 200/248 (80%)
 Strand = Plus / Plus

                                                                       
Query: 87  aactacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcgg 146
           |||| ||||||||||||| |||||| || || |||| ||||| || || | ||||||| |
Sbjct: 202 aactccgtcctcgagctctaggtcttaactttttcacaatagcacccccattgacttcag 261

                                                                       
Query: 147 ctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggctg 206
           ||||| |||| ||||||||| |||  |  ||  ||   | |||||| |||||||  ||||
Sbjct: 262 ctttactaataaataaattcacttccttcaagcccaggttatgagtagcatttgatgctg 321

                                                                       
Query: 207 ccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatca 266
           | ||||||||||| || || |||||||||||||| ||||| |||||||| | ||||||||
Sbjct: 322 cagaataaaccaatttcaaaatgggataagatgcccgataaggcatgagttccagtatca 381

                                                                       
Query: 267 taacagtttcctcgtagtaacgccaccgaatctcgtcaagaactctttgtgctttgaaaa 326
           |||  || ||| | ||| ||||||  |||||||  ||||  |||||| ||||||||||||
Sbjct: 382 taagtgtgtccgcataggaacgcccgcgaatctgatcaattactcttcgtgctttgaaaa 441

                   
Query: 327 cagacata 334
           ||||||||
Sbjct: 442 cagacata 449



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                 
Query: 603 gagtaggcacgaattctcccaatttgcgacctaccata 640
           |||||||| ||||||||||||||||  |||||||||||
Sbjct: 643 gagtaggcgcgaattctcccaatttatgacctaccata 680



 Score = 46.1 bits (23), Expect = 0.14
 Identities = 35/39 (89%)
 Strand = Plus / Plus

                                                  
Query: 543 aattcagttaacgacgagatttagtatcctttcttgcat 581
           |||||| |||||||||||||||| |||| || |||||||
Sbjct: 589 aattcaattaacgacgagatttattatcgttccttgcat 627

---

>emb|AM087200.2| Lycopersicon esculentum complete chloroplast genome
          Length = 155460

 Score =  109 bits (55), Expect = 1e-20
 Identities = 166/203 (81%)
 Strand = Plus / Plus

                                                                         
Query: 86    aaactacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcg 145
             |||||||||||||||||||||||| | |||||||||| | ||||||    | ||||||||
Sbjct: 85341 aaactacgtcctcgagctcgaggtttcaatttcttcacagtagtaccttcattgacttcg 85400

                                                                         
Query: 146   gctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggct 205
             |||||| |||||| |||||| | || |  | || || |||  | | | |||||||| |||
Sbjct: 85401 gctttactaatgactaaattggtttcgctggaacccatattgtaactagcatttgctgct 85460

                                                                         
Query: 206   gccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatc 265
             || ||||||||||| || || ||||||||| ||||||||||||||||||| |  ||||||
Sbjct: 85461 gcagaataaaccaatttcaaaatgggataacatgctcgatagggcatgagttctagtatc 85520

                                    
Query: 266   ataacagtttcctcgtagtaacg 288
             ||||  |||||||| ||| ||||
Sbjct: 85521 ataagcgtttcctcataggaacg 85543

---

>gb|DQ347959.1| Lycopersicon esculentum cultivar LA3023 chloroplast, complete genome
          Length = 155461

 Score =  109 bits (55), Expect = 1e-20
 Identities = 166/203 (81%)
 Strand = Plus / Plus

                                                                         
Query: 86    aaactacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcg 145
             |||||||||||||||||||||||| | |||||||||| | ||||||    | ||||||||
Sbjct: 85338 aaactacgtcctcgagctcgaggtttcaatttcttcacagtagtaccttcattgacttcg 85397

                                                                         
Query: 146   gctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggct 205
             |||||| |||||| |||||| | || |  | || || |||  | | | |||||||| |||
Sbjct: 85398 gctttactaatgactaaattggtttcgctggaacccatattgtaactagcatttgctgct 85457

                                                                         
Query: 206   gccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatc 265
             || ||||||||||| || || ||||||||| ||||||||||||||||||| |  ||||||
Sbjct: 85458 gcagaataaaccaatttcaaaatgggataacatgctcgatagggcatgagttctagtatc 85517

                                    
Query: 266   ataacagtttcctcgtagtaacg 288
             ||||  |||||||| ||| ||||
Sbjct: 85518 ataagcgtttcctcataggaacg 85540

---

>gb|DQ347958.1| Solanum bulbocastanum cultivar PT29 chloroplast, complete genome
          Length = 155371

 Score =  109 bits (55), Expect = 1e-20
 Identities = 166/203 (81%)
 Strand = Plus / Plus

                                                                         
Query: 86    aaactacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcg 145
             |||||||||||||||||||||||| | |||||||||| | ||||||    | ||||||||
Sbjct: 85224 aaactacgtcctcgagctcgaggtttcaatttcttcacagtagtaccttcattgacttcg 85283

                                                                         
Query: 146   gctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggct 205
             |||||| |||||| |||||| | || |  | || || |||  | | | |||||||| |||
Sbjct: 85284 gctttactaatgactaaattggtttcgctggaacccatattgtaactagcatttgctgct 85343

                                                                         
Query: 206   gccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatc 265
             || ||||||||||| || || ||||||||| ||||||||||||||||||| |  ||||||
Sbjct: 85344 gcagaataaaccaatttcaaaatgggataacatgctcgatagggcatgagttctagtatc 85403

                                    
Query: 266   ataacagtttcctcgtagtaacg 288
             ||||  |||||||| ||| ||||
Sbjct: 85404 ataagcgtttcctcataggaacg 85426

---

>gb|AY582139.1| Panax ginseng chloroplast, complete genome
          Length = 156318

 Score =  103 bits (52), Expect = 7e-19
 Identities = 151/184 (82%)
 Strand = Plus / Plus

                                                                         
Query: 86    aaactacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcg 145
             |||||||||||||||||||||||| | ||||||||||  ||||||| |   |||||||| 
Sbjct: 85507 aaactacgtcctcgagctcgaggttttaatttcttcacgatagtaccctcgctgacttca 85566

                                                                         
Query: 146   gctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggct 205
             |||||| |||| | |||||| | || || | ||||| |||  | | | |||||||| |||
Sbjct: 85567 gctttactaataactaaatttgattcgttggaatccatattgtaactagcatttgctgct 85626

                                                                         
Query: 206   gccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatc 265
             || ||||||||||| || || ||||||||| |||||||||| |||||||| |  ||||||
Sbjct: 85627 gcagaataaaccaatttaaaaatgggataacatgctcgataaggcatgagttctagtatc 85686

                 
Query: 266   ataa 269
             ||||
Sbjct: 85687 ataa 85690

---

>gb|DQ006171.1| Commelina communis voucher Wells 4872 US psbA-trnH intergenic
           spacer and tRNA-His (trnH) gene, partial sequence;
           chloroplast
          Length = 770

 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 118/141 (83%)
 Strand = Plus / Plus

                                                                       
Query: 194 gcatttgcggctgccgaataaaccaactttaagatgggataagatgctcgatagggcatg 253
           |||||||| ||||| | ||||||||| ||||| |||| ||||||||||||||| ||||| 
Sbjct: 57  gcatttgctgctgcnggataaaccaattttaaaatggtataagatgctcgataaggcata 116

                                                                       
Query: 254 aggttcagtatcataacagtttcctcgtagtaacgccaccgaatctcgtcaagaactctt 313
           || | |||||||||||  |||||||| ||  |||| |  ||||| |  ||||  ||||||
Sbjct: 117 agttccagtatcataagtgtttcctcatacgaacggccgcgaatttgatcaattactctt 176

                                
Query: 314 tgtgctttgaaaacagacata 334
           |||||||||||||||||||||
Sbjct: 177 tgtgctttgaaaacagacata 197



 Score = 40.1 bits (20), Expect = 8.7
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 554 cgacgagatttagtatcctttcttgcat 581
           |||||||||||| |||| ||||||||||
Sbjct: 343 cgacgagatttattatcgtttcttgcat 370

---

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 66/72 (91%)
 Strand = Plus / Plus

                                                                            
Query: 569      tcctttcttgcattttcataactcgtaaaatgccgagtaggcacgaattctcccaatttg 628
                |||||||||||| ||||||||||||| ||||||||||| || | |||||| |||||||||
Sbjct: 34364792 tcctttcttgcactttcataactcgtgaaatgccgagttggtatgaattcccccaatttg 34364851

                            
Query: 629      cgacctaccata 640
                ||||||||||||
Sbjct: 34364852 cgacctaccata 34364863

---

>dbj|AP003260.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0468B07
          Length = 169071

 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 66/72 (91%)
 Strand = Plus / Plus

                                                                         
Query: 569   tcctttcttgcattttcataactcgtaaaatgccgagtaggcacgaattctcccaatttg 628
             |||||||||||| ||||||||||||| ||||||||||| || | |||||| |||||||||
Sbjct: 47136 tcctttcttgcactttcataactcgtgaaatgccgagttggtatgaattcccccaatttg 47195

                         
Query: 629   cgacctaccata 640
             ||||||||||||
Sbjct: 47196 cgacctaccata 47207

---

>gb|AY727187.1| Trillium ovatum psbA-trnH intergenic spacer, partial sequence;
           chloroplast
          Length = 1029

 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 198/248 (79%)
 Strand = Plus / Plus

                                                                       
Query: 87  aactacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcgg 146
           |||| ||||||||||||| |||||| || || |||| ||||| || || | ||||||| |
Sbjct: 219 aactccgtcctcgagctctaggtcttaactttttcacaatagcacccccattgacttcag 278

                                                                       
Query: 147 ctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggctg 206
           ||| | |||| ||||||||| |||  |  ||  ||   | |||||| || ||||  ||||
Sbjct: 279 cttgactaataaataaattcacttccttcaagcccaggttatgagtagcgtttgatgctg 338

                                                                       
Query: 207 ccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatca 266
           | ||||||||||| || || |||||||||||||| ||||| |||||||| | ||||||||
Sbjct: 339 cagaataaaccaatttcaaaatgggataagatgcccgataaggcatgagttccagtatca 398

                                                                       
Query: 267 taacagtttcctcgtagtaacgccaccgaatctcgtcaagaactctttgtgctttgaaaa 326
           |||  || ||| | ||| ||||||  |||||||  ||||  |||||| ||||||||||||
Sbjct: 399 taagtgtgtccgcataggaacgcccgcgaatctgatcaattactcttcgtgctttgaaaa 458

                   
Query: 327 cagacata 334
           ||||||||
Sbjct: 459 cagacata 466



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 36/39 (92%)
 Strand = Plus / Plus

                                                  
Query: 602 cgagtaggcacgaattctcccaatttgcgacctaccata 640
           ||||||||| ||||||||||||||||  |||||||||||
Sbjct: 664 cgagtaggcgcgaattctcccaatttatgacctaccata 702

---

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 93.7 bits (47), Expect = 7e-16
 Identities = 95/111 (85%)
 Strand = Plus / Minus

                                                                           
Query: 307     aactctttgtgctttgaaaacagacatagggatacgtttttgtgctttgaaaactctctc 366
               |||||||||| ||||||||||||||||| ||||  |||||||||| ||||||||    | 
Sbjct: 4343410 aactctttgtactttgaaaacagacatatggatgtgtttttgtgcattgaaaacctgttt 4343351

                                                                  
Query: 367     gaacttaagtagacgatcggttggaactttccttgcgagtttccttagccc 417
               |||||||| |||| |||||||||| ||| | ||||| ||||||||||||||
Sbjct: 4343350 gaacttaattagatgatcggttggtactgttcttgcaagtttccttagccc 4343300

---

>gb|AC079633.9|AC079633 Genomic Sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBa0032G08, from Chromosome 3, complete sequence
          Length = 122052

 Score = 93.7 bits (47), Expect = 7e-16
 Identities = 95/111 (85%)
 Strand = Plus / Plus

                                                                         
Query: 307   aactctttgtgctttgaaaacagacatagggatacgtttttgtgctttgaaaactctctc 366
             |||||||||| ||||||||||||||||| ||||  |||||||||| ||||||||    | 
Sbjct: 83087 aactctttgtactttgaaaacagacatatggatgtgtttttgtgcattgaaaacctgttt 83146

                                                                
Query: 367   gaacttaagtagacgatcggttggaactttccttgcgagtttccttagccc 417
             |||||||| |||| |||||||||| ||| | ||||| ||||||||||||||
Sbjct: 83147 gaacttaattagatgatcggttggtactgttcttgcaagtttccttagccc 83197

---

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 93.7 bits (47), Expect = 7e-16
 Identities = 95/111 (85%)
 Strand = Plus / Minus

                                                                           
Query: 307     aactctttgtgctttgaaaacagacatagggatacgtttttgtgctttgaaaactctctc 366
               |||||||||| ||||||||||||||||| ||||  |||||||||| ||||||||    | 
Sbjct: 4343525 aactctttgtactttgaaaacagacatatggatgtgtttttgtgcattgaaaacctgttt 4343466

                                                                  
Query: 367     gaacttaagtagacgatcggttggaactttccttgcgagtttccttagccc 417
               |||||||| |||| |||||||||| ||| | ||||| ||||||||||||||
Sbjct: 4343465 gaacttaattagatgatcggttggtactgttcttgcaagtttccttagccc 4343415

---

>dbj|AP005880.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBb0032G22
          Length = 127365

 Score = 93.7 bits (47), Expect = 7e-16
 Identities = 62/67 (92%)
 Strand = Plus / Minus

                                                                         
Query: 155   atgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggctgccgaataa 214
             ||||||||||| |||||||||||||||||||||||||| | |||||| | ||||||||||
Sbjct: 18621 atgaataaatttgctttgtcgaaatccctataatgagtagtatttgctgttgccgaataa 18562

                    
Query: 215   accaact 221
             |||||||
Sbjct: 18561 accaact 18555



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 96/114 (84%), Gaps = 9/114 (7%)
 Strand = Plus / Minus

                                                                         
Query: 248   ggcatgaggttcagtatcataacagtttcctcgtagtaacgccaccgaatctcgtcaaga 307
             ||||||||||||||||||||||  ||||| ||||||||||||      ||||| | ||||
Sbjct: 18540 ggcatgaggttcagtatcataatggtttcttcgtagtaacgc------atctcatgaaga 18487

                                                                   
Query: 308   actc-tttgtgctttgaaaacagacatagggatacgtttttgtgctttgaaaac 360
             |||| ||||| |||||||||| |||||  ||||  |||||||||||||||||||
Sbjct: 18486 actcttttgtactttgaaaacggacat--ggatgtgtttttgtgctttgaaaac 18435

---

>gb|AY780259.1| Eucalyptus globulus subsp. globulus chloroplast, complete genome
          Length = 160286

 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 157/194 (80%)
 Strand = Plus / Plus

                                                                         
Query: 95    cctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcggctttagta 154
             ||||||||||||||| | ||||| |||||| |||||| |    ||||||| |||||| ||
Sbjct: 88364 cctcgagctcgaggttttaattttttcatagtagtaccctcgttgacttcagctttacta 88423

                                                                         
Query: 155   atgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggctgccgaataa 214
             || | |||| | ||||  | |||| || ||| |||| | |||||||| ||||| ||||||
Sbjct: 88424 ataactaaacttgcttcattgaaacccatattatgactagcatttgctgctgcagaataa 88483

                                                                         
Query: 215   accaactttaagatgggataagatgctcgatagggcatgaggttcagtatcataacagtt 274
             |||||||| || ||||||||| | |||||||| ||||| || |  ||||||||||  |||
Sbjct: 88484 accaacttaaaaatgggataacacgctcgataaggcataagttcgagtatcataagtgtt 88543

                           
Query: 275   tcctcgtagtaacg 288
             ||||||||| ||||
Sbjct: 88544 tcctcgtaggaacg 88557

---

>gb|AY727186.1| Trillium texanum psbA-trnH intergenic spacer, partial sequence;
           chloroplast
          Length = 1060

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 197/248 (79%)
 Strand = Plus / Plus

                                                                       
Query: 87  aactacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcgg 146
           |||| ||||||||||||| |||||| || || |||| ||||| || || | ||||||| |
Sbjct: 228 aactccgtcctcgagctctaggtcttaactttttcacaatagcacccccattgacttcag 287

                                                                       
Query: 147 ctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggctg 206
           ||| | |||| ||||||||| |||  |  ||  ||   | |||||| || ||||  ||||
Sbjct: 288 cttgactaataaataaattcacttccttcaagcccaggttatgagtagcgtttgatgctg 347

                                                                       
Query: 207 ccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatca 266
           | ||||||||||| || || |||||||||||||| ||||| ||||||||   ||||||||
Sbjct: 348 cagaataaaccaatttcaaaatgggataagatgcccgataaggcatgagtgccagtatca 407

                                                                       
Query: 267 taacagtttcctcgtagtaacgccaccgaatctcgtcaagaactctttgtgctttgaaaa 326
           |||  || ||| | ||| ||||||  |||||||  ||||  |||||| ||||||||||||
Sbjct: 408 taagtgtgtccacataggaacgcccgcgaatctgatcaattactcttcgtgctttgaaaa 467

                   
Query: 327 cagacata 334
           ||||||||
Sbjct: 468 cagacata 475



 Score = 46.1 bits (23), Expect = 0.14
 Identities = 35/39 (89%)
 Strand = Plus / Plus

                                                  
Query: 602 cgagtaggcacgaattctcccaatttgcgacctaccata 640
           ||||||||| ||||||||||||||||   ||||||||||
Sbjct: 673 cgagtaggcgcgaattctcccaatttataacctaccata 711

---

>gb|DQ006202.1| Trillium sessile voucher Wells 4879 US PsbA (psbA) gene, partial
           cds; psbA-trnH intergenic spacer, complete sequence; and
           tRNA-His (trnH) gene, partial sequence; chloroplast
          Length = 1172

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 197/248 (79%)
 Strand = Plus / Plus

                                                                       
Query: 87  aactacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcgg 146
           |||| ||||||||||||| |||||| || || |||| ||||| || || | ||||||| |
Sbjct: 283 aactccgtcctcgagctctaggtcttaactttttcacaatagcacccccattgacttcag 342

                                                                       
Query: 147 ctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggctg 206
           ||| | |||| ||||||||| |||| |  ||  ||   | |||||| || ||||  ||||
Sbjct: 343 cttgactaataaataaattcactttcttcaagcccaggttatgagtagcgtttgatgctg 402

                                                                       
Query: 207 ccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatca 266
           | ||| ||||||| || || |||||||||||||| ||||| ||||||||   ||||||||
Sbjct: 403 cagaagaaaccaatttcaaaatgggataagatgcccgataaggcatgagtgccagtatca 462

                                                                       
Query: 267 taacagtttcctcgtagtaacgccaccgaatctcgtcaagaactctttgtgctttgaaaa 326
           |||  || ||| | ||| ||||||  |||||||  ||||  |||||| ||||||||||||
Sbjct: 463 taagtgtgtccgcataggaacgcccgcgaatctgatcaatgactcttcgtgctttgaaaa 522

                   
Query: 327 cagacata 334
           ||||||||
Sbjct: 523 cagacata 530



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                 
Query: 603 gagtaggcacgaattctcccaatttgcgacctaccata 640
           |||||||| ||||||||||||||||  |||||||||||
Sbjct: 771 gagtaggcgcgaattctcccaatttatgacctaccata 808

---

>gb|DQ345959.1| Gossypium hirsutum cultivar coker 310 FR chloroplast, complete genome
          Length = 160301

 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 82/95 (86%)
 Strand = Plus / Plus

                                                                         
Query: 194   gcatttgcggctgccgaataaaccaactttaagatgggataagatgctcgatagggcatg 253
             |||||||| ||||| ||||||||||| ||||| ||||||||| |||||||||| ||||||
Sbjct: 88237 gcatttgctgctgcagaataaaccaattttaaaatgggataacatgctcgataaggcatg 88296

                                                
Query: 254   aggttcagtatcataacagtttcctcgtagtaacg 288
             || |  ||||||||||  ||||| |||||| ||||
Sbjct: 88297 agttctagtatcataagtgtttcttcgtaggaacg 88331

---

>emb|AJ315790.1|OSA315790 Oryza sativa partial BP-73 gene for SAP-like protein
          Length = 5896

 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 94/111 (84%)
 Strand = Plus / Plus

                                                                        
Query: 307  aactctttgtgctttgaaaacagacatagggatacgtttttgtgctttgaaaactctctc 366
            |||||||||| ||||||||||||||||| ||||  |||||||||| ||||||||    | 
Sbjct: 3410 aactctttgtactttgaaaacagacatatggatgtgtttttgtgcgttgaaaacctgttt 3469

                                                               
Query: 367  gaacttaagtagacgatcggttggaactttccttgcgagtttccttagccc 417
            |||||||| |||| |||||| ||| ||| | ||||| ||||||||||||||
Sbjct: 3470 gaacttaattagatgatcggctggtactgttcttgcaagtttccttagccc 3520

---

>emb|AJ428413.1|CFE428413 Calycanthus fertilis var. ferax complete chloroplast genome
          Length = 153337

 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 197/249 (79%)
 Strand = Plus / Plus

                                                                         
Query: 87    aactacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcgg 146
             |||||||||||  ||| |||||| | || || ||||  ||||||| || | |||||||||
Sbjct: 84744 aactacgtcctttagcccgaggtttaaactttttcacgatagtacccccattgacttcgg 84803

                                                                         
Query: 147   ctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggctg 206
             ||||| |||||||| |||  |||| ||  |||  | |||  ||| | |||||||| ||||
Sbjct: 84804 ctttactaatgaatgaatcagcttcgttaaaactcttattgtgactagcatttgctgctg 84863

                                                                         
Query: 207   ccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatca 266
             | ||||||||||  || || |||||||||||||||||||| |||||||| | ||||| ||
Sbjct: 84864 cagaataaaccagtttaaaaatgggataagatgctcgataaggcatgagttccagtagca 84923

                                                                         
Query: 267   taacagtttcctcgtagtaacgccaccgaatctcgtcaagaactctttgtgctttgaaaa 326
             |||  |||||| | ||| |||| |  |||||||  ||||  |||||| ||||||||  | 
Sbjct: 84924 taagtgtttccgcataggaacgtccacgaatctgatcaacgactcttcgtgctttgtgag 84983

                      
Query: 327   cagacatag 335
             |||||||||
Sbjct: 84984 cagacatag 84992



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                  
Query: 603   gagtaggcacgaattctcccaatttgcgacctaccat 639
             |||||||  ||||||||||||||||| |||| |||||
Sbjct: 85164 gagtaggtgcgaattctcccaatttgtgacccaccat 85200

---

>emb|AJ970307.1| Cucumis sativus chloroplast complete genome
          Length = 155293

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 81/95 (85%)
 Strand = Plus / Plus

                                                                         
Query: 194   gcatttgcggctgccgaataaaccaactttaagatgggataagatgctcgatagggcatg 253
             |||||||| ||||||||||||||||| ||||| || |||||| |||||||||| ||||||
Sbjct: 86083 gcatttgctgctgccgaataaaccaattttaaaattggataacatgctcgataaggcatg 86142

                                                
Query: 254   aggttcagtatcataacagtttcctcgtagtaacg 288
             || |  |||||||| |  ||||| |||||| ||||
Sbjct: 86143 agttcgagtatcatcattgtttcttcgtaggaacg 86177

---

>gb|DQ119058.1| Cucumis sativus cultivar Baekmibaekdadagi plastid, complete genome
          Length = 155527

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 81/95 (85%)
 Strand = Plus / Plus

                                                                         
Query: 194   gcatttgcggctgccgaataaaccaactttaagatgggataagatgctcgatagggcatg 253
             |||||||| ||||||||||||||||| ||||| || |||||| |||||||||| ||||||
Sbjct: 86312 gcatttgctgctgccgaataaaccaattttaaaattggataacatgctcgataaggcatg 86371

                                                
Query: 254   aggttcagtatcataacagtttcctcgtagtaacg 288
             || |  |||||||| |  ||||| |||||| ||||
Sbjct: 86372 agttcgagtatcatcattgtttcttcgtaggaacg 86406

---

>emb|AJ627251.1| Nymphaea alba chloroplast, complete genome
          Length = 159930

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 108/132 (81%)
 Strand = Plus / Plus

                                                                         
Query: 138   tgacttcggctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcat 197
             |||||||||||||| |||| |||||||  ||||  |  ||| ||||||  ||| | ||||
Sbjct: 89310 tgacttcggctttactaataaataaatcagcttctttcaaacccctattgtgactagcat 89369

                                                                         
Query: 198   ttgcggctgccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggt 257
             |||| ||||| |||||||| || || || ||||| ||| |||||||||| |||||||| |
Sbjct: 89370 ttgctgctgcggaataaactaatttgaaaatggggtaacatgctcgataaggcatgagtt 89429

                         
Query: 258   tcagtatcataa 269
              |||||||||||
Sbjct: 89430 ccagtatcataa 89441



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                   
Query: 603   gagtaggcacgaattctcccaatttgcgacctaccata 640
             |||||||| ||||||||||||||||| |||| ||||||
Sbjct: 89702 gagtaggcgcgaattctcccaatttgtgacccaccata 89739

---

>gb|AY916449.1| Phalaenopsis aphrodite subsp. formosana plastid, complete genome
          Length = 148964

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 195/248 (78%)
 Strand = Plus / Plus

                                                                         
Query: 87    aactacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcgg 146
             |||||||||||||||| || ||| | || || ||||||||||| |  ||| ||||||| |
Sbjct: 85691 aactacgtcctcgagcccggggttttaactttttcataatagtgcctctattgacttcag 85750

                                                                         
Query: 147   ctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggctg 206
             ||||| |||| ||||| |   |||  |  ||| || ||| |||| | |||||||| ||||
Sbjct: 85751 ctttactaataaataagtcaacttcattcaaacccatattatgactagcatttgctgctg 85810

                                                                         
Query: 207   ccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatca 266
             | |||||||| || |||||||| ||||||||||| | ||| ||||| || |  |||||||
Sbjct: 85811 cagaataaactaattttaagattggataagatgccctataaggcattagttctagtatca 85870

                                                                         
Query: 267   taacagtttcctcgtagtaacgccaccgaatctcgtcaagaactctttgtgctttgaaaa 326
             | |  | |||||| ||  |||| |  |||||||  ||||  |||||| ||||||||||||
Sbjct: 85871 tgagtgcttcctcataagaacgtccacgaatctgatcaattactcttcgtgctttgaaaa 85930

                     
Query: 327   cagacata 334
             ||||||||
Sbjct: 85931 cagacata 85938



 Score = 44.1 bits (22), Expect = 0.56
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                    
Query: 603    gagtaggcacgaattctcccaatttgcgacctaccata 640
              |||||||  ||||||||||||||||| |||| ||||||
Sbjct: 148635 gagtaggtgcgaattctcccaatttgtgaccgaccata 148598



 Score = 44.1 bits (22), Expect = 0.56
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                   
Query: 603   gagtaggcacgaattctcccaatttgcgacctaccata 640
             |||||||  ||||||||||||||||| |||| ||||||
Sbjct: 86287 gagtaggtgcgaattctcccaatttgtgaccgaccata 86324

---

>gb|AY962222.1| Hevea brasiliensis clone hmct52 microsatellite sequence
          Length = 813

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 97/118 (82%)
 Strand = Plus / Minus

                                                                       
Query: 138 tgacttcggctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcat 197
           |||||||||||||| |||||| ||||||  ||| || |||| || |||  ||| | ||||
Sbjct: 124 tgacttcggctttactaatgattaaattgacttcgttgaaacccatattgtgactagcat 65

                                                                     
Query: 198 ttgcggctgccgaataaaccaactttaagatgggataagatgctcgatagggcatgag 255
           |||| ||||| ||||||| ||| || || | ||||||| |||||||||| ||||||||
Sbjct: 64  ttgctgctgcagaataaatcaatttaaaaaggggataacatgctcgataaggcatgag 7

---

>emb|X13336.1|CHSORP Spinacia oleracea plastid genes rps3, rps19, rpl14, rpl16 and rpl22
           for ribosomal proteins S3, S19, L14, L16 and L22
          Length = 4102

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 55/62 (88%)
 Strand = Plus / Minus

                                                                       
Query: 194 gcatttgcggctgccgaataaaccaactttaagatgggataagatgctcgatagggcatg 253
           |||||||| ||||| ||||||| ||| || || ||||||||| |||||||||||||||||
Sbjct: 690 gcatttgctgctgcagaataaatcaatttaaaaatgggataacatgctcgatagggcatg 631

             
Query: 254 ag 255
           ||
Sbjct: 630 ag 629

---

>emb|AJ400848.1|SOL400848 Spinacia oleracea complete chloroplast genome
          Length = 150725

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 55/62 (88%)
 Strand = Plus / Plus

                                                                         
Query: 194   gcatttgcggctgccgaataaaccaactttaagatgggataagatgctcgatagggcatg 253
             |||||||| ||||| ||||||| ||| || || ||||||||| |||||||||||||||||
Sbjct: 82252 gcatttgctgctgcagaataaatcaatttaaaaatgggataacatgctcgatagggcatg 82311

               
Query: 254   ag 255
             ||
Sbjct: 82312 ag 82313

---

>emb|AJ879453.1| Acorus calamus chloroplast, complete genome
          Length = 153821

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 88/106 (83%)
 Strand = Plus / Plus

                                                                         
Query: 194   gcatttgcggctgccgaataaaccaactttaagatgggataagatgctcgatagggcatg 253
             |||||||| ||||| || |||||||| ||||| || ||| ||||||||||||| ||||| 
Sbjct: 83378 gcatttgctgctgcagagtaaaccaattttaaaataggaaaagatgctcgataaggcatc 83437

                                                           
Query: 254   aggttcagtatcataacagtttcctcgtagtaacgccaccgaatct 299
             || |  ||||||||||  |||||||| ||| ||||||  |||||||
Sbjct: 83438 agttctagtatcataattgtttcctcataggaacgcccacgaatct 83483



 Score = 44.1 bits (22), Expect = 0.56
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                   
Query: 603   gagtaggcacgaattctcccaatttgcgacctaccata 640
             |||||||  ||||||||||||||||| |||| ||||||
Sbjct: 83677 gagtaggtgcgaattctcccaatttgtgaccgaccata 83714

---

>gb|DQ069474.1| Yucca schidigera ribosomal protein S19 (rps19) gene, partial cds;
           chloroplast
          Length = 276

 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 36/38 (94%)
 Strand = Plus / Minus

                                                 
Query: 603 gagtaggcacgaattctcccaatttgcgacctaccata 640
           |||||||| ||||||||||||||||| |||||||||||
Sbjct: 232 gagtaggcgcgaattctcccaatttgtgacctaccata 195

---

>gb|DQ383815.1| Helianthus annuus cultivar line HA383 chloroplast, complete genome
          Length = 151104

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 71/85 (83%)
 Strand = Plus / Plus

                                                                         
Query: 86    aaactacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcg 145
             |||||||| ||||||||||||||| | ||| ||||||| |||||||   || | ||||||
Sbjct: 82982 aaactacgccctcgagctcgaggttttaatctcttcatgatagtacctttatttacttcg 83041

                                      
Query: 146   gctttagtaatgaataaattcgctt 170
             |||||| |||| | |||||| ||||
Sbjct: 83042 gctttactaatcactaaatttgctt 83066



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                  
Query: 604   agtaggcacgaattctcccaatttgcgacctaccata 640
             ||||||| | ||||||||||||||| | |||||||||
Sbjct: 83401 agtaggcgcaaattctcccaatttgtgtcctaccata 83437

---

>gb|DQ069473.1| Typha latifolia ribosomal protein S19 (rps19) gene, partial cds;
           chloroplast
          Length = 276

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                 
Query: 603 gagtaggcacgaattctcccaatttgcgacctaccata 640
           |||||||  ||||||||||||||||| |||||||||||
Sbjct: 232 gagtaggggcgaattctcccaatttgtgacctaccata 195



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 553 acgacgagatttagtatcctttcttgcat 581
           ||||||||||||| |||| ||||||||||
Sbjct: 276 acgacgagatttattatcgtttcttgcat 248

---

>gb|AC120884.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
             OSJNBa0017D19, complete sequence
          Length = 142015

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 29/30 (96%)
 Strand = Plus / Minus

                                           
Query: 577   tgcattttcataactcgtaaaatgccgagt 606
             |||| |||||||||||||||||||||||||
Sbjct: 58206 tgcactttcataactcgtaaaatgccgagt 58177

---

>emb|X07521.1|HVD1PSBA Hordeum vulgare chloroplast psbA gene for D1 protein of photosystem
            II
          Length = 1428

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                      
Query: 522  cttcttaatctttctattcagaattc 547
            ||||||||||||||||||||||||||
Sbjct: 1403 cttcttaatctttctattcagaattc 1428

---

>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 29/30 (96%)
 Strand = Plus / Minus

                                              
Query: 577      tgcattttcataactcgtaaaatgccgagt 606
                |||| |||||||||||||||||||||||||
Sbjct: 22627420 tgcactttcataactcgtaaaatgccgagt 22627391

---

>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 29/30 (96%)
 Strand = Plus / Minus

                                              
Query: 577      tgcattttcataactcgtaaaatgccgagt 606
                |||| |||||||||||||||||||||||||
Sbjct: 22937331 tgcactttcataactcgtaaaatgccgagt 22937302

---

>gb|M38374.1|BLYCPPSBAB Barley chloroplast herbicide-binding protein (psbA) gene, complete
            cds
          Length = 1430

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                      
Query: 522  cttcttaatctttctattcagaattc 547
            ||||||||||||||||||||||||||
Sbjct: 1405 cttcttaatctttctattcagaattc 1430

---

>emb|X07942.1|CHHVPSBA Barley chloroplast psbA gene
          Length = 2190

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                      
Query: 522  cttcttaatctttctattcagaattc 547
            ||||||||||||||||||||||||||
Sbjct: 2165 cttcttaatctttctattcagaattc 2190

---

>gb|AC097174.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1111_A10,
             complete sequence
          Length = 155106

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                              
Query: 168   ctttgtcgaaatccctataatgagttgcatttg 200
             |||||| |||||||||||||||||| |||||||
Sbjct: 91188 ctttgttgaaatccctataatgagtagcatttg 91220

---

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                                
Query: 168     ctttgtcgaaatccctataatgagttgcatttg 200
               |||||| |||||||||||||||||| |||||||
Sbjct: 5176685 ctttgttgaaatccctataatgagtagcatttg 5176717



 Score = 44.1 bits (22), Expect = 0.56
 Identities = 46/54 (85%)
 Strand = Plus / Minus

                                                                     
Query: 425     ttcttctttatcctagggatatactttactagtttgaaacttgtcataaataag 478
               ||||| ||||||| |||| | |||  |||| ||||||||||||||| |||||||
Sbjct: 4877979 ttcttatttatccaaggggtttacggtactggtttgaaacttgtcacaaataag 4877926

---

>gb|DQ424856.1| Vitis vinifera cultivar Maxxa chloroplast, complete genome
          Length = 160928

 Score = 48.1 bits (24), Expect = 0.036
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                                 
Query: 87    aactacgtcctcgagctcgaggtctgaatttcttca 122
             ||||||||||||||||||||||| | ||||| ||||
Sbjct: 88506 aactacgtcctcgagctcgaggtttcaattttttca 88541

---

>gb|DQ069472.1| Ranunculus macranthus ribosomal protein S19 (rps19) gene, partial
           cds; chloroplast
          Length = 276

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 614 aattctcccaatttgcgacctaccata 640
           ||||||||||||||| |||||||||||
Sbjct: 221 aattctcccaatttgtgacctaccata 195

---

>gb|DQ069471.1| Nuphar advena ribosomal protein S19 (rps19) gene, partial cds;
           chloroplast
          Length = 276

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 614 aattctcccaatttgcgacctaccata 640
           |||||||||||||||||||| ||||||
Sbjct: 221 aattctcccaatttgcgacccaccata 195

---

>emb|AJ506156.2|ATR506156 Amborella trichopoda chloroplast genomic DNA, complete sequence
          Length = 162686

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                        
Query: 614   aattctcccaatttgcgacctaccata 640
             ||||||||||||||| |||||||||||
Sbjct: 90702 aattctcccaatttgtgacctaccata 90728

---

>gb|AY757822.1| Acorus gramineus Rps19 (rps19) gene, partial cds; chloroplast
          Length = 228

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                 
Query: 603 gagtaggcacgaattctcccaatttgcgacctaccata 640
           |||||||  ||||||||||||||||| |||| ||||||
Sbjct: 181 gagtaggtgcgaattctcccaatttgtgaccgaccata 144

---

>gb|DQ191749.1| Dioscorea zingiberensis clone 2 from Baoshan Yunnan Province
           psbA-trnH intergenic spacer, complete sequence;
           chloroplast
          Length = 503

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 614 aattctcccaatttgcgacctaccat 639
           ||||||||||||||| ||||||||||
Sbjct: 143 aattctcccaatttgtgacctaccat 168

---

>gb|DQ191747.1| Dioscorea zingiberensis clone 2 from Hunan Province psbA-trnH
           intergenic spacer, complete sequence; chloroplast
          Length = 503

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 614 aattctcccaatttgcgacctaccat 639
           ||||||||||||||| ||||||||||
Sbjct: 143 aattctcccaatttgtgacctaccat 168

---

>gb|AF389766.1| Uncultured bacterium clone NIW3-1 dinitrogenase reductase (nifH)
           gene, partial cds
          Length = 414

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 90  tacgtcctcgagctcgaggtct 111
           ||||||||||||||||||||||
Sbjct: 192 tacgtcctcgagctcgaggtct 171

---

>gb|DQ069469.1| Acorus americanus ribosomal protein S19 (rps19) gene, partial cds;
           chloroplast
          Length = 276

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                 
Query: 603 gagtaggcacgaattctcccaatttgcgacctaccata 640
           |||||||  ||||||||||||||||| |||| ||||||
Sbjct: 232 gagtaggtgcgaattctcccaatttgtgaccgaccata 195

---

>gb|AY424708.1| Uncultured bacterium isolate DGGE band BDS17 NifH (nifH) gene,
           partial cds
          Length = 221

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 90  tacgtcctcgagctcgaggtct 111
           ||||||||||||||||||||||
Sbjct: 94  tacgtcctcgagctcgaggtct 73

---

>gb|AY424700.1| Uncultured bacterium isolate DGGE band BRS9 NifH (nifH) gene,
           partial cds
          Length = 231

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 90  tacgtcctcgagctcgaggtct 111
           ||||||||||||||||||||||
Sbjct: 94  tacgtcctcgagctcgaggtct 73

---

>gb|AY424699.1| Uncultured bacterium isolate DGGE band BDS8 NifH (nifH) gene,
           partial cds
          Length = 216

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 90  tacgtcctcgagctcgaggtct 111
           ||||||||||||||||||||||
Sbjct: 94  tacgtcctcgagctcgaggtct 73

---

>gb|DQ131105.1| Dioscorea zingiberensis psbA-trnH intergenic spacer, partial
           sequence; chloroplast
          Length = 503

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 614 aattctcccaatttgcgacctaccat 639
           ||||||||||||||| ||||||||||
Sbjct: 143 aattctcccaatttgtgacctaccat 168

---

>emb|AL607000.3|OSJN00132 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0089B03,
             complete sequence
          Length = 130910

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                           
Query: 171   tgtcgaaatccctataatgagttgcatttg 200
             ||||||||||| |||||||||| |||||||
Sbjct: 89462 tgtcgaaatccatataatgagtagcatttg 89433

---

>gb|DQ006176.1| Carex cephalophora voucher Lea 1483 US PsbA (psbA) gene, partial
           cds; psbA-trnH intergenic spacer, complete sequence; and
           tRNA-His (trnH) gene, partial sequence; chloroplast
          Length = 868

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 605 gtaggcacgaattctcccaatttgcgacct 634
           |||||| ||||||||||||||||| |||||
Sbjct: 431 gtaggcgcgaattctcccaatttgtgacct 460

---

>gb|AC135425.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0453H11,
              complete sequence
          Length = 187956

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 46/54 (85%)
 Strand = Plus / Minus

                                                                    
Query: 425    ttcttctttatcctagggatatactttactagtttgaaacttgtcataaataag 478
              ||||| ||||||| |||| | |||  |||| ||||||||||||||| |||||||
Sbjct: 150387 ttcttatttatccaaggggtttacggtactggtttgaaacttgtcacaaataag 150334

---

>gb|AY386787.1| Bradyrhizobium liaoningense strain Spr3-7 nitrogenase Fe protein
           (nifH) gene, partial cds
          Length = 356

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 90  tacgtcctcgagctcgaggtc 110
           |||||||||||||||||||||
Sbjct: 198 tacgtcctcgagctcgaggtc 178

---

>gb|M81884.1|EPFCPCG Epifagus virginiana chloroplast, complete genome
          Length = 70028

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                  
Query: 604   agtaggcacgaattctcccaatttgcgacctaccata 640
             |||||| || |||||||| |||||| |||||||||||
Sbjct: 19622 agtaggtacaaattctcctaatttgtgacctaccata 19658

---

>gb|AE007235.1| Sinorhizobium meliloti 1021 plasmid pSymA section 41 of 121 of the
            complete plasmid sequence
          Length = 10370

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 91   acgtcctcgagctcgaggtct 111
            |||||||||||||||||||||
Sbjct: 8029 acgtcctcgagctcgaggtct 8009

---

>gb|DQ480974.1| Uncultured bacterium clone RT-CLY_20 dinitrogenase reductase (nifH)
           gene, partial cds
          Length = 329

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 91  acgtcctcgagctcgaggtct 111
           |||||||||||||||||||||
Sbjct: 95  acgtcctcgagctcgaggtct 75

---

>gb|DQ480958.1| Uncultured bacterium clone RT-075_39 dinitrogenase reductase (nifH)
           gene, partial cds
          Length = 329

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 91  acgtcctcgagctcgaggtct 111
           |||||||||||||||||||||
Sbjct: 95  acgtcctcgagctcgaggtct 75

---

>gb|DQ480915.1| Uncultured bacterium clone UT-CLY_37 dinitrogenase reductase (nifH)
           gene, partial cds
          Length = 329

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 91  acgtcctcgagctcgaggtct 111
           |||||||||||||||||||||
Sbjct: 95  acgtcctcgagctcgaggtct 75

---

>gb|DQ480883.1| Uncultured bacterium clone UT-600_30 dinitrogenase reductase (nifH)
           gene, partial cds
          Length = 329

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 91  acgtcctcgagctcgaggtct 111
           |||||||||||||||||||||
Sbjct: 95  acgtcctcgagctcgaggtct 75

---

>gb|AF389770.1| Uncultured bacterium clone NIS16-4 dinitrogenase reductase (nifH)
           gene, partial cds
          Length = 414

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 91  acgtcctcgagctcgaggtct 111
           |||||||||||||||||||||
Sbjct: 191 acgtcctcgagctcgaggtct 171

---

>gb|AF389775.1| Uncultured bacterium clone NIS15-3 dinitrogenase reductase (nifH)
           gene, partial cds
          Length = 414

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 91  acgtcctcgagctcgaggtct 111
           |||||||||||||||||||||
Sbjct: 191 acgtcctcgagctcgaggtct 171

---

>gb|AF389778.1| Uncultured bacterium clone NIS14-4 dinitrogenase reductase (nifH)
           gene, partial cds
          Length = 414

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 91  acgtcctcgagctcgaggtct 111
           |||||||||||||||||||||
Sbjct: 191 acgtcctcgagctcgaggtct 171

---

>gb|AF389779.1| Uncultured bacterium clone NIS14-3 dinitrogenase reductase (nifH)
           gene, partial cds
          Length = 414

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 91  acgtcctcgagctcgaggtct 111
           |||||||||||||||||||||
Sbjct: 191 acgtcctcgagctcgaggtct 171

---

>gb|AF389783.1| Uncultured bacterium clone NIS13-3 dinitrogenase reductase (nifH)
           gene, partial cds
          Length = 414

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 91  acgtcctcgagctcgaggtct 111
           |||||||||||||||||||||
Sbjct: 191 acgtcctcgagctcgaggtct 171

---

>gb|AF389790.1| Uncultured bacterium clone NIS11-3 dinitrogenase reductase (nifH)
           gene, partial cds
          Length = 414

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 91  acgtcctcgagctcgaggtct 111
           |||||||||||||||||||||
Sbjct: 191 acgtcctcgagctcgaggtct 171

---

>gb|AY424732.1| Uncultured bacterium isolate DGGE band BDS41 NifH (nifH) gene,
           partial cds
          Length = 234

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 91  acgtcctcgagctcgaggtct 111
           |||||||||||||||||||||
Sbjct: 93  acgtcctcgagctcgaggtct 73

---

>gb|AY424697.1| Uncultured bacterium isolate DGGE band BDS6 NifH (nifH) gene,
           partial cds
          Length = 249

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 90  tacgtcctcgagctcgaggtc 110
           |||||||||||||||||||||
Sbjct: 94  tacgtcctcgagctcgaggtc 74

---

>gb|AY221812.1| Xanthobacter flavus clone CC1080A1 dinitrogenase reductase (nifH)
           gene, partial cds
          Length = 324

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 91  acgtcctcgagctcgaggtct 111
           |||||||||||||||||||||
Sbjct: 95  acgtcctcgagctcgaggtct 75


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,491,464
Number of Sequences: 3902068
Number of extensions: 6491464
Number of successful extensions: 137807
Number of sequences better than 10.0: 370
Number of HSP's better than 10.0 without gapping: 381
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 135938
Number of HSP's gapped (non-prelim): 1793
length of query: 640
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 617
effective length of database: 17,143,297,704
effective search space: 10577414683368
effective search space used: 10577414683368
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

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