ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd2h09
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1RCAA_HORVU (Q40073) Ribulose bisphosphate carboxylase/oxygenase ... 121 4e-47
2RCA1_LARTR (Q7X9A0) Ribulose bisphosphate carboxylase/oxygenase ... 98 4e-34
3RCA_ARATH (P10896) Ribulose bisphosphate carboxylase/oxygenase a... 94 2e-33
4RCA_SPIOL (P10871) Ribulose bisphosphate carboxylase/oxygenase a... 94 3e-32
5RCAB_HORVU (Q42450) Ribulose bisphosphate carboxylase/oxygenase ... 105 8e-23
6RCA_MALDO (Q40281) Ribulose bisphosphate carboxylase/oxygenase a... 105 1e-22
7RCA_ORYSA (P93431) Ribulose bisphosphate carboxylase/oxygenase a... 102 7e-22
8RCA_MAIZE (Q9ZT00) Ribulose bisphosphate carboxylase/oxygenase a... 101 2e-21
9RCA2_LARTR (Q7X999) Ribulose bisphosphate carboxylase/oxygenase ... 98 2e-20
10RCA2_TOBAC (Q40565) Ribulose bisphosphate carboxylase/oxygenase ... 98 2e-20
11RCA1_TOBAC (Q40460) Ribulose bisphosphate carboxylase/oxygenase ... 97 3e-20
12RCA_LYCPN (O49074) Ribulose bisphosphate carboxylase/oxygenase a... 94 3e-19
13RCA_PHAAU (O98997) Ribulose bisphosphate carboxylase/oxygenase a... 93 4e-19
14RCA_PHAVU (O64981) Ribulose bisphosphate carboxylase/oxygenase a... 90 5e-18
15RCA_CUCSA (Q01587) Ribulose bisphosphate carboxylase/oxygenase a... 58 2e-08
16RCA_CHLRE (P23489) Ribulose bisphosphate carboxylase/oxygenase a... 45 2e-04
17ACSL4_MOUSE (Q9QUJ7) Long-chain-fatty-acid--CoA ligase 4 (EC 6.2... 32 1.5
18EF1A2_XENLA (P17507) Elongation factor 1-alpha, oocyte form (EF-... 32 1.5
19GP116_HUMAN (Q8IZF2) Probable G-protein coupled receptor 116 pre... 30 4.5
20EF1A_ONCVO (P27592) Elongation factor 1-alpha (EF-1-alpha) 30 4.5
21L2GL2_HUMAN (Q6P1M3) Lethal(2) giant larvae protein homolog 2 (HGL) 30 5.9
22L2GL2_PONPY (Q5RCX2) Lethal(2) giant larvae protein homolog 2 30 5.9
23ACSL4_HUMAN (O60488) Long-chain-fatty-acid--CoA ligase 4 (EC 6.2... 29 7.7
24EF1A0_XENLA (P13549) Elongation factor 1-alpha, somatic form (EF... 29 7.7
25TFE2_XENLA (Q01978) Transcription factor E2-alpha (Transcription... 29 10.0
26OXYR_MACMU (P56494) Oxytocin receptor (OT-R) 29 10.0
27OXYR_HUMAN (P30559) Oxytocin receptor (OT-R) 29 10.0
28OXYR_PIG (P32306) Oxytocin receptor (OT-R) 29 10.0
29OXYR_SHEEP (Q28756) Oxytocin receptor (OT-R) 29 10.0
30OXYR_BOVIN (P56449) Oxytocin receptor (OT-R) 29 10.0
31EF1A3_XENLA (P17508) Elongation factor 1-alpha, oocyte form (EF-... 29 10.0

>RCAA_HORVU (Q40073) Ribulose bisphosphate carboxylase/oxygenase activase A,|
           chloroplast precursor (RuBisCO activase A) (RA A)
          Length = 464

 Score =  121 bits (304), Expect(2) = 4e-47
 Identities = 59/59 (100%), Positives = 59/59 (100%)
 Frame = -3

Query: 546 GPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFYG 370
           GPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFYG
Sbjct: 369 GPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFYG 427



 Score = 86.3 bits (212), Expect(2) = 4e-47
 Identities = 38/38 (100%), Positives = 38/38 (100%)
 Frame = -2

Query: 322 GKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGSCLYTF 209
           GKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGSCLYTF
Sbjct: 427 GKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGSCLYTF 464



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>RCA1_LARTR (Q7X9A0) Ribulose bisphosphate carboxylase/oxygenase activase 1,|
           chloroplast precursor (RuBisCO activase 1) (RA 1)
           (RubisCO activase alpha form)
          Length = 476

 Score = 97.8 bits (242), Expect(2) = 4e-34
 Identities = 46/59 (77%), Positives = 53/59 (89%)
 Frame = -3

Query: 546 GPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFYG 370
           GP +FEQPKMT++KLL YG MLVQEQ+NVKRVQLAD YMS+AALGDAN DA+K G+FYG
Sbjct: 379 GPPSFEQPKMTIDKLLGYGGMLVQEQENVKRVQLADKYMSEAALGDANNDAIKRGTFYG 437



 Score = 66.6 bits (161), Expect(2) = 4e-34
 Identities = 30/40 (75%), Positives = 33/40 (82%), Gaps = 1/40 (2%)
 Frame = -2

Query: 325 GGKGAQQ-GTLPVPEGCTDQNAKNYDPTARSDDGSCLYTF 209
           GG+ AQQ G +PVPEGCTD  A NYDPTARSDDGSC+Y F
Sbjct: 437 GGQAAQQVGNVPVPEGCTDPQATNYDPTARSDDGSCVYKF 476



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>RCA_ARATH (P10896) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 474

 Score = 94.4 bits (233), Expect(2) = 2e-33
 Identities = 44/59 (74%), Positives = 52/59 (88%)
 Frame = -3

Query: 546 GPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFYG 370
           GP  FEQP+MT EKL+EYG+MLV EQ+NVKRVQLA+TY+SQAALGDAN DA+  G+FYG
Sbjct: 379 GPPVFEQPEMTYEKLMEYGNMLVMEQENVKRVQLAETYLSQAALGDANADAIGRGTFYG 437



 Score = 67.8 bits (164), Expect(2) = 2e-33
 Identities = 29/38 (76%), Positives = 33/38 (86%)
 Frame = -2

Query: 322 GKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGSCLYTF 209
           GKGAQQ  LPVPEGCTD  A+N+DPTARSDDG+C+Y F
Sbjct: 437 GKGAQQVNLPVPEGCTDPVAENFDPTARSDDGTCVYNF 474



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>RCA_SPIOL (P10871) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 472

 Score = 94.0 bits (232), Expect(2) = 3e-32
 Identities = 43/59 (72%), Positives = 53/59 (89%)
 Frame = -3

Query: 546 GPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFYG 370
           GP  FEQP+MT++KL+EYG+MLVQEQ+NVKRVQLAD YMS AALGDAN+DA+  G+F+G
Sbjct: 377 GPPVFEQPEMTLQKLMEYGNMLVQEQENVKRVQLADQYMSSAALGDANKDAIDRGTFFG 435



 Score = 63.9 bits (154), Expect(2) = 3e-32
 Identities = 28/36 (77%), Positives = 30/36 (83%)
 Frame = -2

Query: 322 GKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGSCLY 215
           GK AQQ +LPV +GCTD  AKNYDPTARSDDGSC Y
Sbjct: 435 GKAAQQVSLPVAQGCTDPEAKNYDPTARSDDGSCTY 470



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>RCAB_HORVU (Q42450) Ribulose bisphosphate carboxylase/oxygenase activase B,|
           chloroplast precursor (RuBisCO activase B) (RA B)
          Length = 425

 Score =  105 bits (262), Expect = 8e-23
 Identities = 48/59 (81%), Positives = 55/59 (93%)
 Frame = -3

Query: 546 GPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFYG 370
           GP TF+QPKMT+EKL+EYGHMLVQEQ+NVKRVQLAD Y+S+AALG AN DAMKTG+FYG
Sbjct: 366 GPPTFDQPKMTIEKLMEYGHMLVQEQENVKRVQLADKYLSEAALGQANDDAMKTGAFYG 424



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>RCA_MALDO (Q40281) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 437

 Score =  105 bits (261), Expect = 1e-22
 Identities = 49/59 (83%), Positives = 55/59 (93%)
 Frame = -3

Query: 546 GPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFYG 370
           GP TFEQPKMT+EKLLEYG+MLVQEQ+NVKRVQLAD Y+S+AALGDAN DAM TG+FYG
Sbjct: 379 GPPTFEQPKMTIEKLLEYGNMLVQEQENVKRVQLADKYLSEAALGDANSDAMNTGTFYG 437



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>RCA_ORYSA (P93431) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 432

 Score =  102 bits (254), Expect = 7e-22
 Identities = 47/59 (79%), Positives = 55/59 (93%)
 Frame = -3

Query: 546 GPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFYG 370
           GP  FEQPKMT+EKL+EYG+MLV+EQ+NVKRVQLA+ Y+S+AALGDAN DAMKTGSFYG
Sbjct: 369 GPPEFEQPKMTIEKLIEYGYMLVKEQENVKRVQLAEQYLSEAALGDANSDAMKTGSFYG 427



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>RCA_MAIZE (Q9ZT00) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 433

 Score =  101 bits (251), Expect = 2e-21
 Identities = 46/58 (79%), Positives = 55/58 (94%)
 Frame = -3

Query: 546 GPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFY 373
           GP TFEQPK+T+EKLLEYGHMLV EQ+NVKRVQLAD Y+++AALG+AN+DAMKTGSF+
Sbjct: 375 GPPTFEQPKITIEKLLEYGHMLVAEQENVKRVQLADKYLNEAALGEANEDAMKTGSFF 432



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>RCA2_LARTR (Q7X999) Ribulose bisphosphate carboxylase/oxygenase activase 2,|
           chloroplast precursor (RuBisCO activase 2) (RA 2)
           (RubisCO activase beta form)
          Length = 435

 Score = 97.8 bits (242), Expect = 2e-20
 Identities = 45/57 (78%), Positives = 54/57 (94%)
 Frame = -3

Query: 546 GPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSF 376
           GP TFEQPKMT++KLL+YG+MLV+EQ+NVKRVQLAD YMS+AALGDANQDA+K G+F
Sbjct: 379 GPPTFEQPKMTIDKLLQYGNMLVEEQENVKRVQLADKYMSEAALGDANQDAIKRGTF 435



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>RCA2_TOBAC (Q40565) Ribulose bisphosphate carboxylase/oxygenase activase 2,|
           chloroplast precursor (RuBisCO activase 2) (RA 2)
          Length = 439

 Score = 97.8 bits (242), Expect = 2e-20
 Identities = 46/57 (80%), Positives = 53/57 (92%)
 Frame = -3

Query: 546 GPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSF 376
           GP TFEQPKMTVEKLLEYG+MLVQEQ+NVKRVQLA+TY+ +AALGDAN DA+ TG+F
Sbjct: 383 GPPTFEQPKMTVEKLLEYGNMLVQEQENVKRVQLAETYLKEAALGDANADAINTGNF 439



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>RCA1_TOBAC (Q40460) Ribulose bisphosphate carboxylase/oxygenase activase 1,|
           chloroplast precursor (RuBisCO activase 1) (RA 1)
          Length = 442

 Score = 97.1 bits (240), Expect = 3e-20
 Identities = 45/58 (77%), Positives = 52/58 (89%)
 Frame = -3

Query: 546 GPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFY 373
           GP TFEQPKMT+EKLLEYG+MLVQEQ+NVKRVQLAD Y+ +AALGDAN DA+  GSF+
Sbjct: 383 GPPTFEQPKMTIEKLLEYGNMLVQEQENVKRVQLADKYLKEAALGDANADAINNGSFF 440



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>RCA_LYCPN (O49074) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 459

 Score = 94.0 bits (232), Expect = 3e-19
 Identities = 44/55 (80%), Positives = 51/55 (92%)
 Frame = -3

Query: 546 GPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTG 382
           GP TFEQPKMT+EKLLEYG+MLVQEQ+NVKRVQLA+TY+ +AALGDAN DA+ TG
Sbjct: 378 GPPTFEQPKMTLEKLLEYGNMLVQEQENVKRVQLAETYLKEAALGDANADAINTG 432



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>RCA_PHAAU (O98997) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 439

 Score = 93.2 bits (230), Expect = 4e-19
 Identities = 41/58 (70%), Positives = 56/58 (96%)
 Frame = -3

Query: 546 GPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFY 373
           GP TF+QPKM+++KLL+YG+MLVQEQ+NVKRVQLAD Y+++AALG+AN+DA+K+GSF+
Sbjct: 381 GPPTFDQPKMSLDKLLQYGNMLVQEQENVKRVQLADKYLNEAALGNANEDAIKSGSFF 438



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>RCA_PHAVU (O64981) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 441

 Score = 89.7 bits (221), Expect = 5e-18
 Identities = 41/58 (70%), Positives = 53/58 (91%)
 Frame = -3

Query: 546 GPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFY 373
           GP TF+QPKMT++KLL Y  MLVQEQ+NVKRVQLAD Y+++AALG+AN+DA+K+GSF+
Sbjct: 383 GPPTFDQPKMTLDKLLLYASMLVQEQENVKRVQLADQYLNEAALGNANEDAIKSGSFF 440



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>RCA_CUCSA (Q01587) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 413

 Score = 58.2 bits (139), Expect = 2e-08
 Identities = 26/33 (78%), Positives = 31/33 (93%)
 Frame = -3

Query: 543 PVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQL 445
           P TF+QPKMT+EKLLEYG+MLV EQ+NVKRV+L
Sbjct: 377 PPTFDQPKMTIEKLLEYGNMLVMEQENVKRVKL 409



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>RCA_CHLRE (P23489) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 408

 Score = 44.7 bits (104), Expect = 2e-04
 Identities = 22/42 (52%), Positives = 28/42 (66%)
 Frame = -3

Query: 540 VTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAAL 415
           V   +  M +  L++YG  LV EQ+NVKRVQLAD Y+S A L
Sbjct: 353 VAMPKVSMDLNVLIKYGKSLVDEQENVKRVQLADAYLSGAEL 394



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>ACSL4_MOUSE (Q9QUJ7) Long-chain-fatty-acid--CoA ligase 4 (EC 6.2.1.3)|
           (Long-chain acyl-CoA synthetase 4) (LACS 4) (mACS4)
          Length = 711

 Score = 31.6 bits (70), Expect = 1.5
 Identities = 16/42 (38%), Positives = 25/42 (59%)
 Frame = -2

Query: 130 VNISLNILSIPIWQRPIHLLIICHSQYSFLQWRLLLLCCKQN 5
           +N+ LN+L+I +   P+HLLI  +S   F+ W  L    K+N
Sbjct: 1   MNLKLNVLTIILL--PVHLLITIYSALIFIPWYFLTNAKKKN 40



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>EF1A2_XENLA (P17507) Elongation factor 1-alpha, oocyte form (EF-1-alpha-O)|
           (EF-1AO) (42S p48)
          Length = 461

 Score = 31.6 bits (70), Expect = 1.5
 Identities = 24/78 (30%), Positives = 33/78 (42%), Gaps = 8/78 (10%)
 Frame = -3

Query: 540 VTFEQPKMTVE-KLLEYGHMLVQEQ-------DNVKRVQLADTYMSQAALGDANQDAMKT 385
           VTF    +T E K +E  H  +QE         NVK + + D      A    N   M+ 
Sbjct: 278 VTFAPSNVTTEVKSVEMHHEALQEALPGDNVGFNVKNISVKDIRRGNVAGDSKNDPPMQA 337

Query: 384 GSFYG*KILHTHPPSLAA 331
           GSF    I+  HP  ++A
Sbjct: 338 GSFTAQVIILNHPGQISA 355



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>GP116_HUMAN (Q8IZF2) Probable G-protein coupled receptor 116 precursor|
          Length = 1346

 Score = 30.0 bits (66), Expect = 4.5
 Identities = 14/35 (40%), Positives = 21/35 (60%)
 Frame = +2

Query: 437 VSASCTRLTLSCSWTSMCPYSSSFSTVIFGCSKVT 541
           + +SC+R TL    T  CP  SS +TVI+ C  ++
Sbjct: 420 IDSSCSRYTLKADGTQ-CPSGSSGTTVIYTCEFIS 453



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>EF1A_ONCVO (P27592) Elongation factor 1-alpha (EF-1-alpha)|
          Length = 464

 Score = 30.0 bits (66), Expect = 4.5
 Identities = 23/78 (29%), Positives = 32/78 (41%), Gaps = 8/78 (10%)
 Frame = -3

Query: 540 VTFEQPKMTVE-KLLEYGHMLVQEQ-------DNVKRVQLADTYMSQAALGDANQDAMKT 385
           VTF    +T E K +E  H  +QE         NVK + + D      A    N  A +T
Sbjct: 278 VTFAPQNLTTEVKSVEMHHEALQEALPGDNVGFNVKNISIKDIRRGSVASDSKNDPAKET 337

Query: 384 GSFYG*KILHTHPPSLAA 331
             F    I+  HP  ++A
Sbjct: 338 KMFTAQVIIMNHPGQISA 355



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>L2GL2_HUMAN (Q6P1M3) Lethal(2) giant larvae protein homolog 2 (HGL)|
          Length = 1020

 Score = 29.6 bits (65), Expect = 5.9
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = -2

Query: 94  WQRPIHLLIICHSQYSFLQW 35
           WQR   LL+ CHS  S+ QW
Sbjct: 238 WQRDGRLLVSCHSDGSYCQW 257



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>L2GL2_PONPY (Q5RCX2) Lethal(2) giant larvae protein homolog 2|
          Length = 1019

 Score = 29.6 bits (65), Expect = 5.9
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = -2

Query: 94  WQRPIHLLIICHSQYSFLQW 35
           WQR   LL+ CHS  S+ QW
Sbjct: 238 WQRDGRLLVSCHSDGSYCQW 257



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>ACSL4_HUMAN (O60488) Long-chain-fatty-acid--CoA ligase 4 (EC 6.2.1.3)|
           (Long-chain acyl-CoA synthetase 4) (LACS 4)
          Length = 711

 Score = 29.3 bits (64), Expect = 7.7
 Identities = 15/42 (35%), Positives = 24/42 (57%)
 Frame = -2

Query: 130 VNISLNILSIPIWQRPIHLLIICHSQYSFLQWRLLLLCCKQN 5
           + + LN+L+I +   P+HLLI  +S   F+ W  L    K+N
Sbjct: 1   MKLKLNVLTIILL--PVHLLITIYSALIFIPWYFLTNAKKKN 40



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>EF1A0_XENLA (P13549) Elongation factor 1-alpha, somatic form (EF-1-alpha-S)|
          Length = 462

 Score = 29.3 bits (64), Expect = 7.7
 Identities = 24/78 (30%), Positives = 31/78 (39%), Gaps = 8/78 (10%)
 Frame = -3

Query: 540 VTFEQPKMTVE-KLLEYGHMLVQEQD-------NVKRVQLADTYMSQAALGDANQDAMKT 385
           VTF    +T E K +E  H  + E         NVK V + D      A    N   M+ 
Sbjct: 278 VTFAPVNVTTEVKSVEMHHEALTEAVPGDNVGFNVKNVSVKDVRRGNVAGDSKNDPPMEA 337

Query: 384 GSFYG*KILHTHPPSLAA 331
           GSF    I+  HP  + A
Sbjct: 338 GSFTAQVIILNHPGQIGA 355



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>TFE2_XENLA (Q01978) Transcription factor E2-alpha (Transcription factor|
           XE12/XE47)
          Length = 658

 Score = 28.9 bits (63), Expect = 10.0
 Identities = 18/55 (32%), Positives = 23/55 (41%), Gaps = 2/55 (3%)
 Frame = -2

Query: 382 FLLRLENSPYTPTI--SCCIGGGKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGS 224
           F L + N    PT   S   GGG G ++ T   P G  D N   +D      DG+
Sbjct: 26  FPLPVANGKTRPTTLASTQFGGGSGLEERTGSAPWGTEDHNGSTFDQGRGYGDGT 80



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>OXYR_MACMU (P56494) Oxytocin receptor (OT-R)|
          Length = 389

 Score = 28.9 bits (63), Expect = 10.0
 Identities = 16/60 (26%), Positives = 29/60 (48%), Gaps = 5/60 (8%)
 Frame = -2

Query: 184 MFYLPKSASHPSDCWACFV-----NISLNILSIPIWQRPIHLLIICHSQYSFLQWRLLLL 20
           +F L + A    DCWA F+        +  +++ ++  P+ +L  C+   SF  W+ L L
Sbjct: 174 IFSLREVADGVFDCWAVFIQPWGPKAYITWITLAVYIVPVIVLAACYGLISFKIWQNLRL 233



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>OXYR_HUMAN (P30559) Oxytocin receptor (OT-R)|
          Length = 389

 Score = 28.9 bits (63), Expect = 10.0
 Identities = 16/60 (26%), Positives = 29/60 (48%), Gaps = 5/60 (8%)
 Frame = -2

Query: 184 MFYLPKSASHPSDCWACFV-----NISLNILSIPIWQRPIHLLIICHSQYSFLQWRLLLL 20
           +F L + A    DCWA F+        +  +++ ++  P+ +L  C+   SF  W+ L L
Sbjct: 174 IFSLREVADGVFDCWAVFIQPWGPKAYITWITLAVYIVPVIVLATCYGLISFKIWQNLRL 233



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>OXYR_PIG (P32306) Oxytocin receptor (OT-R)|
          Length = 386

 Score = 28.9 bits (63), Expect = 10.0
 Identities = 16/60 (26%), Positives = 29/60 (48%), Gaps = 5/60 (8%)
 Frame = -2

Query: 184 MFYLPKSASHPSDCWACFV-----NISLNILSIPIWQRPIHLLIICHSQYSFLQWRLLLL 20
           +F L + A    DCWA F+        +  +++ ++  P+ +L  C+   SF  W+ L L
Sbjct: 174 IFSLREVADGVFDCWAVFIQPWGPKAYITWITLAVYIVPVIVLAACYGLISFKIWQNLRL 233



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>OXYR_SHEEP (Q28756) Oxytocin receptor (OT-R)|
          Length = 391

 Score = 28.9 bits (63), Expect = 10.0
 Identities = 16/60 (26%), Positives = 29/60 (48%), Gaps = 5/60 (8%)
 Frame = -2

Query: 184 MFYLPKSASHPSDCWACFV-----NISLNILSIPIWQRPIHLLIICHSQYSFLQWRLLLL 20
           +F L + A    DCWA F+        +  +++ ++  P+ +L  C+   SF  W+ L L
Sbjct: 174 IFSLREVADGVFDCWAVFIQPWGPKAYITWITLAVYIVPVIVLAACYGLISFKIWQNLRL 233



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>OXYR_BOVIN (P56449) Oxytocin receptor (OT-R)|
          Length = 391

 Score = 28.9 bits (63), Expect = 10.0
 Identities = 16/60 (26%), Positives = 29/60 (48%), Gaps = 5/60 (8%)
 Frame = -2

Query: 184 MFYLPKSASHPSDCWACFV-----NISLNILSIPIWQRPIHLLIICHSQYSFLQWRLLLL 20
           +F L + A    DCWA F+        +  +++ ++  P+ +L  C+   SF  W+ L L
Sbjct: 174 IFSLREVADGVFDCWAVFIQPWGPKAYITWITLAVYIVPVIVLATCYGLISFKIWQNLRL 233



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>EF1A3_XENLA (P17508) Elongation factor 1-alpha, oocyte form (EF-1-alpha-O1)|
           (EF-1AO1)
          Length = 461

 Score = 28.9 bits (63), Expect = 10.0
 Identities = 23/78 (29%), Positives = 32/78 (41%), Gaps = 8/78 (10%)
 Frame = -3

Query: 540 VTFEQPKMTVE-KLLEYGHMLVQEQ-------DNVKRVQLADTYMSQAALGDANQDAMKT 385
           VTF    +T E K +E  H  + E         NVK + + D      A    N   M+ 
Sbjct: 278 VTFAPSNVTTEVKSVEMHHEALVEALPGDNVGFNVKNISVKDIRRGNVAGDSKNDPPMQA 337

Query: 384 GSFYG*KILHTHPPSLAA 331
           GSF    I+  HP  ++A
Sbjct: 338 GSFTAQVIILNHPGQISA 355


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 77,180,592
Number of Sequences: 219361
Number of extensions: 1600146
Number of successful extensions: 4254
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 4094
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4253
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4430660157
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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