ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd2h08
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY377991.1| Triticum aestivum chloroplast-localized Ptr ToxA-... 743 0.0
2gb|AY736122.1| Triticum aestivum chloroplast inositol phosphatas... 557 e-155
3ref|XM_478693.1| Oryza sativa (japonica cultivar-group), mRNA 238 1e-59
4gb|AY224446.1| Oryza sativa (japonica cultivar-group) isolate 23... 238 1e-59
5dbj|AK064914.1| Oryza sativa (japonica cultivar-group) cDNA clon... 238 1e-59
6gb|AY104484.1| Zea mays PCO107854 mRNA sequence 204 2e-49
7dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 159 1e-35
8dbj|AP005195.3| Oryza sativa (japonica cultivar-group) genomic D... 159 1e-35
9dbj|AK059695.1| Oryza sativa (japonica cultivar-group) cDNA clon... 84 5e-13
10ref|NM_127659.1| Arabidopsis thaliana THF1 AT2G20890 (THF1) mRNA... 56 1e-04
11gb|AY081596.1| Arabidopsis thaliana unknown protein (At2g20890) ... 56 1e-04
12gb|AY062799.1| Arabidopsis thaliana Unknown protein (At2g20890; ... 56 1e-04
13emb|BX818803.1|CNS0A8TL Arabidopsis thaliana Full-length cDNA Co... 56 1e-04
14emb|BX820185.1|CNS0A8J4 Arabidopsis thaliana Full-length cDNA Co... 56 1e-04
15emb|BX820020.1|CNS0A8FF Arabidopsis thaliana Full-length cDNA Co... 56 1e-04
16gb|AY087394.1| Arabidopsis thaliana clone 34875 mRNA, complete s... 48 0.027
17gb|AY899908.1| Arabidopsis thaliana chloroplast thylakoid format... 48 0.027
18gb|AC121803.3| Mus musculus BAC clone RP23-441A23 from chromosom... 44 0.42
19dbj|AP004491.1| Lotus japonicus genomic DNA, chromosome 1, clone... 44 0.42
20gb|AC105487.6| Rattus norvegicus 1 BAC CH230-229J7 (Children's H... 42 1.6
21emb|BX908742.7| Zebrafish DNA sequence from clone DKEY-246G23 in... 42 1.6
22dbj|AK078026.1| Mus musculus 11 days embryo head cDNA, RIKEN ful... 42 1.6
23gb|AC113955.20| Mus musculus chromosome 7, clone RP23-402K24, co... 42 1.6
24emb|AL115993.1|CNS01CU9 Botrytis cinerea strain T4 cDNA library 42 1.6
25emb|AL116480.1|CNS01D7S Botrytis cinerea strain T4 cDNA library 42 1.6
26emb|AL683856.10| Mouse DNA sequence from clone RP23-46J2 on chro... 42 1.6
27gb|AC117787.8| Mus musculus chromosome 1, clone RP24-546N2, comp... 40 6.5
28ref|XM_529718.1| PREDICTED: Pan troglodytes LOC453671 (LOC453671... 40 6.5
29gb|CP000066.1| Trypanosoma brucei chromosome 3, complete sequence 40 6.5
30gb|AC159446.1| Trypanosoma brucei chromosome 3 clone RPCI93-3K10... 40 6.5
31gb|AC113968.12| Mus musculus chromosome 8, clone RP23-120M17, co... 40 6.5
32gb|AC116812.10| Mus musculus chromosome 15, clone RP24-357G13, c... 40 6.5
33gb|AC099572.12| Mus musculus chromosome 15, clone RP23-16A17, co... 40 6.5
34gb|AC116871.6| Mus musculus chromosome 19, clone RP24-417P12, co... 40 6.5
35ref|NG_000008.6| Homo sapiens cytochrome P450, family 2, subfami... 40 6.5
36gb|AC089992.2| Bos taurus clone RP42-210F11, complete sequence 40 6.5
37gb|AC164532.4| Mus musculus chromosome 7, clone RP24-64B10, comp... 40 6.5
38gb|DP000008.1| Bos taurus target 1 genomic scaffold 40 6.5
39ref|XM_947168.1| Theileria annulata strain Ankara exonuclease (T... 40 6.5
40emb|CR854896.11| Zebrafish DNA sequence from clone DKEY-239B8 in... 40 6.5
41emb|AL772182.3| Human DNA sequence from clone RP11-36K22 on chro... 40 6.5
42gb|AY342161.1| Solanum tuberosum cultivar Kennebec light-regulat... 40 6.5
43gb|AC128353.6| Rattus norvegicus 13 BAC CH230-148A5 (Children's ... 40 6.5
44emb|AL161624.7| Human DNA sequence from clone RP11-487I9 on chro... 40 6.5
45emb|AL135785.10| Human DNA sequence from clone RP11-113O24 on ch... 40 6.5
46emb|BX842632.1| Neurospora crassa DNA linkage group I BAC contig... 40 6.5
47emb|BX901922.9| Zebrafish DNA sequence from clone DKEY-33C12 in ... 40 6.5
48emb|BX000359.7| Mouse DNA sequence from clone RP23-343C18 on chr... 40 6.5
49emb|AL845307.29| Zebrafish DNA sequence from clone DKEY-56N17 in... 40 6.5
50emb|CR848040.6| Zebrafish DNA sequence from clone DKEY-19P15 in ... 40 6.5
51dbj|AP008230.1| Desulfitobacterium hafniense Y51 genomic DNA, co... 40 6.5
52gb|AF479287.1| Mus musculus PHF5B (Phf5b) pseudogene, complete s... 40 6.5
53gb|AC074312.64| Mus musculus strain C57BL/6J clone rp23-311c19 m... 40 6.5
54gb|AC006234.4| Arabidopsis thaliana chromosome 2 clone F5H14 map... 40 6.5
55gb|AC016251.9| Homo sapiens chromosome 15, clone RP11-759A24, co... 40 6.5
56gb|AC012409.9| Homo sapiens chromosome 15, clone RP11-327J17, co... 40 6.5
57gb|AC099538.2| Homo sapiens chromosome 3 clone RP11-90I9, comple... 40 6.5
58dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.5
59emb|BX818901.1|CNS0A8Y0 Arabidopsis thaliana Full-length cDNA Co... 40 6.5
60gb|AC008537.5|AC008537 Homo sapiens chromosome 19 clone CTC-490E... 40 6.5
61gb|AC099053.2| Homo sapiens chromosome 3 clone RP11-464H2, compl... 40 6.5
62gb|AC023795.18| Homo sapiens 12 BAC RP11-242B24 (Roswell Park Ca... 40 6.5
63dbj|AK173094.1| Mus musculus premature mRNA for mKIAA1067 protein 40 6.5
64gb|AC153611.12| Mus musculus 6 BAC RP23-110P14 (Roswell Park Can... 40 6.5
65emb|AL929156.10| Mouse DNA sequence from clone RP23-475H18 on ch... 40 6.5
66gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 6.5
67emb|AL732639.5|CNS08C9E Oryza sativa chromosome 12, . BAC OSJNBa... 40 6.5
68gb|L47539.1|HEACRP Haemophilus somnus cyclic AMP receptor protei... 40 6.5
69emb|AL645861.12| Mouse DNA sequence from clone RP23-184G6 on chr... 40 6.5
70dbj|AP001091.5| Homo sapiens genomic DNA, chromosome 18p clone:R... 40 6.5 
>gb|AY377991.1| Triticum aestivum chloroplast-localized Ptr ToxA-binding protein1
            (TaThf1) mRNA, complete cds; nuclear gene for chloroplast
            product
          Length = 1130

 Score =  743 bits (375), Expect = 0.0
 Identities = 458/483 (94%), Gaps = 5/483 (1%)
 Strand = Plus / Minus

                                                                        
Query: 1    atctttttgtaccgccgagtactacac-cacgctaagagcagccaaagatgcccccgata 59
            |||||||||||| || ||||||||||| | ||| ||||||||||||||||||||||||||
Sbjct: 1004 atctttttgtacggcggagtactacactcgcgcgaagagcagccaaagatgcccccgata 945

                                                                        
Query: 60   gttctcaacgctatccagatgt--ataactgttaatatctgttatccggacaagctctcc 117
            ||||||||||||||||||||||  |||||||||||||||||||||||||||||||| |||
Sbjct: 944  gttctcaacgctatccagatgtgtataactgttaatatctgttatccggacaagctgtcc 885

                                                                        
Query: 118  tctggggaaaggttgagttaatgcttcaagggataagtgcttccatcgaattttgcaaca 177
            ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 884  tctggggaaaggttgagttaatgcttcaagggataagcgcttccatcgaattttgcaaca 825

                                                                        
Query: 178  gcctcgttcggcttgggcgtctccaatctctctgctctcttcttcttttccctctcgacg 237
            ||||| ||||||||||||||||||||||||||  |||||||||||||||||||||||| |
Sbjct: 824  gcctcattcggcttgggcgtctccaatctctcctctctcttcttcttttccctctcgatg 765

                                                                        
Query: 238  tattccttaagaagttccttggcttgaaccaatttcgacagtaagttgcggtaaacgtca 297
            |||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 764  tattccttgagaagttccttggcttgaaccaatttcgagagtaagttgcggtaaacgtca 705

                                                                        
Query: 298  aggtctctatccacgcnnnnnnnattgatgtttagagcagcgcaaagcttgtccagtacg 357
            ||||||||||||||||       |||||||||||||||||| ||||||||||||||||||
Sbjct: 704  aggtctctatccacgctctttttattgatgtttagagcagcacaaagcttgtccagtacg 645

                                                                        
Query: 358  gttggctccgtcgcatttgagagctcaagcaaacggaacaagccaacagcaaagaacccg 417
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 644  gttggctccgtcgcatttgagagctcaagcaaacggaacaagccaacagcaaagaa-ccg 586

                                                                        
Query: 418  gctgtagcctgaagtttcccttaccctgggccctttctgatatatctttcagaatggact 477
            ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 585  gctgtag-ctgaagtttcccttaccctgggccctttctgatatatctttcagaatggact 527

               
Query: 478  cta 480
            |||
Sbjct: 526  cta 524
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>gb|AY736122.1| Triticum aestivum chloroplast inositol phosphatase-like protein
           mRNA, complete cds; nuclear gene for chloroplast product
          Length = 909

 Score =  557 bits (281), Expect = e-155
 Identities = 336/354 (94%), Gaps = 2/354 (0%)
 Strand = Plus / Minus

                                                                       
Query: 127 aggttgagttaatgcttcaagggataagtgcttccatcgaattttgcaacagcctcgttc 186
           |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||
Sbjct: 909 aggttgagttaatgcttcaagggataagcgcttccatcgaattttgcaacagcctcattc 850

                                                                       
Query: 187 ggcttgggcgtctccaatctctctgctctcttcttcttttccctctcgacgtattcctta 246
           |||||||||||||||||||||||  ||||||||||||||||||||| || ||||||||| 
Sbjct: 849 ggcttgggcgtctccaatctctcctctctcttcttcttttccctcttgatgtattccttg 790

                                                                       
Query: 247 agaagttccttggcttgaaccaatttcgacagtaagttgcggtaaacgtcaaggtctcta 306
           ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 789 agaagttccttggcttgaaccaatttcgagagtaagttgcggtaaacgtcaaggtctcta 730

                                                                       
Query: 307 tccacgcnnnnnnnattgatgtttagagcagcgcaaagcttgtccagtacggttggctcc 366
           |||||||       |||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 729 tccacgctctttttattgatgtttagagcagcacaaagcttgtccagtacggttggctcc 670

                                                                       
Query: 367 gtcgcatttgagagctcaagcaaacggaacaagccaacagcaaagaacccggctgtagcc 426
           ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
Sbjct: 669 gtcgcatttgagagctcaagcaaacggaacaagccaacagcaaagaa-ccggctgtag-c 612

                                                                 
Query: 427 tgaagtttcccttaccctgggccctttctgatatatctttcagaatggactcta 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 tgaagtttcccttaccctgggccctttctgatatatctttcagaatggactcta 558
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>ref|XM_478693.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1153

 Score =  238 bits (120), Expect = 1e-59
 Identities = 232/269 (86%), Gaps = 2/269 (0%)
 Strand = Plus / Minus

                                                                       
Query: 212 ctctcttcttcttttccctctcgacgtattccttaagaagttccttggcttgaaccaatt 271
           ||||||||||||||||||| || ||||||||||| ||||||||||| || || |||||||
Sbjct: 886 ctctcttcttcttttccctttccacgtattccttgagaagttccttagcctggaccaatt 827

                                                                       
Query: 272 tcgacagtaagttgcggtaaacgtcaaggtctctatccacgcnnnnnnnattgatgttta 331
           | || |||| ||| |||||||| || || || || || || |        ||||||||||
Sbjct: 826 tggagagtatgttccggtaaacatcgagatccctgtcgacacttcttttgttgatgttta 767

                                                                       
Query: 332 gagcagcgcaaagcttgtccagtacggttggctccgtcgcatttgagagctcaagcaaac 391
           ||||||||||||||||||| |||| ||||||||| || |||||||  |||||||||||||
Sbjct: 766 gagcagcgcaaagcttgtctagtatggttggctctgttgcatttgcaagctcaagcaaac 707

                                                                       
Query: 392 ggaacaagccaacagcaaagaacccggctgtagcctgaagtttcccttaccctgggccct 451
           ||||||||||||| |||||||| |||||||||| |||||| |||||||||||||||||||
Sbjct: 706 ggaacaagccaactgcaaagaa-ccggctgtag-ctgaagcttcccttaccctgggccct 649

                                        
Query: 452 ttctgatatatctttcagaatggactcta 480
           |||||| |||||||||||||||| |||||
Sbjct: 648 ttctgaaatatctttcagaatggcctcta 620
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>gb|AY224446.1| Oryza sativa (japonica cultivar-group) isolate 23045 inositol
           phosphatase-like protein mRNA, complete cds
          Length = 864

 Score =  238 bits (120), Expect = 1e-59
 Identities = 232/269 (86%), Gaps = 2/269 (0%)
 Strand = Plus / Minus

                                                                       
Query: 212 ctctcttcttcttttccctctcgacgtattccttaagaagttccttggcttgaaccaatt 271
           ||||||||||||||||||| || ||||||||||| ||||||||||| || || |||||||
Sbjct: 787 ctctcttcttcttttccctttccacgtattccttgagaagttccttagcctggaccaatt 728

                                                                       
Query: 272 tcgacagtaagttgcggtaaacgtcaaggtctctatccacgcnnnnnnnattgatgttta 331
           | || |||| ||| |||||||| || || || || || || |        ||||||||||
Sbjct: 727 tggagagtatgttccggtaaacatcgagatccctgtcgacacttcttttgttgatgttta 668

                                                                       
Query: 332 gagcagcgcaaagcttgtccagtacggttggctccgtcgcatttgagagctcaagcaaac 391
           ||||||||||||||||||| |||| ||||||||| || |||||||  |||||||||||||
Sbjct: 667 gagcagcgcaaagcttgtctagtatggttggctctgttgcatttgcaagctcaagcaaac 608

                                                                       
Query: 392 ggaacaagccaacagcaaagaacccggctgtagcctgaagtttcccttaccctgggccct 451
           ||||||||||||| |||||||| |||||||||| |||||| |||||||||||||||||||
Sbjct: 607 ggaacaagccaactgcaaagaa-ccggctgtag-ctgaagcttcccttaccctgggccct 550

                                        
Query: 452 ttctgatatatctttcagaatggactcta 480
           |||||| |||||||||||||||| |||||
Sbjct: 549 ttctgaaatatctttcagaatggcctcta 521
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>dbj|AK064914.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000M13, full
           insert sequence
          Length = 1152

 Score =  238 bits (120), Expect = 1e-59
 Identities = 232/269 (86%), Gaps = 2/269 (0%)
 Strand = Plus / Minus

                                                                       
Query: 212 ctctcttcttcttttccctctcgacgtattccttaagaagttccttggcttgaaccaatt 271
           ||||||||||||||||||| || ||||||||||| ||||||||||| || || |||||||
Sbjct: 885 ctctcttcttcttttccctttccacgtattccttgagaagttccttagcctggaccaatt 826

                                                                       
Query: 272 tcgacagtaagttgcggtaaacgtcaaggtctctatccacgcnnnnnnnattgatgttta 331
           | || |||| ||| |||||||| || || || || || || |        ||||||||||
Sbjct: 825 tggagagtatgttccggtaaacatcgagatccctgtcgacacttcttttgttgatgttta 766

                                                                       
Query: 332 gagcagcgcaaagcttgtccagtacggttggctccgtcgcatttgagagctcaagcaaac 391
           ||||||||||||||||||| |||| ||||||||| || |||||||  |||||||||||||
Sbjct: 765 gagcagcgcaaagcttgtctagtatggttggctctgttgcatttgcaagctcaagcaaac 706

                                                                       
Query: 392 ggaacaagccaacagcaaagaacccggctgtagcctgaagtttcccttaccctgggccct 451
           ||||||||||||| |||||||| |||||||||| |||||| |||||||||||||||||||
Sbjct: 705 ggaacaagccaactgcaaagaa-ccggctgtag-ctgaagcttcccttaccctgggccct 648

                                        
Query: 452 ttctgatatatctttcagaatggactcta 480
           |||||| |||||||||||||||| |||||
Sbjct: 647 ttctgaaatatctttcagaatggcctcta 619
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>gb|AY104484.1| Zea mays PCO107854 mRNA sequence
          Length = 842

 Score =  204 bits (103), Expect = 2e-49
 Identities = 173/196 (88%), Gaps = 2/196 (1%)
 Strand = Plus / Minus

                                                                       
Query: 277 agtaagttgcggtaaacgtcaaggtctctatccacgcnnnnnnnattgatgtttagagca 336
           |||| |||||||||||| |||||||| |||||||| |       | ||| |||||| |||
Sbjct: 841 agtatgttgcggtaaacatcaaggtccctatccacacttcttttactgacgtttagtgca 782

                                                                       
Query: 337 gcgcaaagcttgtccagtacggttggctccgtcgcatttgagagctcaagcaaacggaac 396
           |||||||||||||| ||||  ||||||||||| |||||||||||||||||||||||||||
Sbjct: 781 gcgcaaagcttgtctagtattgttggctccgttgcatttgagagctcaagcaaacggaac 722

                                                                       
Query: 397 aagccaacagcaaagaacccggctgtagcctgaagtttcccttaccctgggccctttctg 456
           |||||||| ||||||||  ||||||||| ||||||||||||||||||| |||||||||||
Sbjct: 721 aagccaactgcaaagaa-tcggctgtag-ctgaagtttcccttacccttggccctttctg 664

                           
Query: 457 atatatctttcagaat 472
           ||||||||||||||||
Sbjct: 663 atatatctttcagaat 648
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score =  159 bits (80), Expect = 1e-35
 Identities = 124/136 (91%), Gaps = 2/136 (1%)
 Strand = Plus / Plus

                                                                            
Query: 345      cttgtccagtacggttggctccgtcgcatttgagagctcaagcaaacggaacaagccaac 404
                |||||| |||| ||||||||| || |||||||  ||||||||||||||||||||||||||
Sbjct: 22267402 cttgtctagtatggttggctctgttgcatttgcaagctcaagcaaacggaacaagccaac 22267461

                                                                            
Query: 405      agcaaagaacccggctgtagcctgaagtttcccttaccctgggccctttctgatatatct 464
                 |||||||||| ||||||||| ||||| ||||||||||||||||||||||||| ||||||
Sbjct: 22267462 tgcaaagaacc-ggctgtagc-tgaagcttcccttaccctgggccctttctgaaatatct 22267519

                                
Query: 465      ttcagaatggactcta 480
                |||||||||| |||||
Sbjct: 22267520 ttcagaatggcctcta 22267535



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 89/112 (79%)
 Strand = Plus / Plus

                                                                            
Query: 235      acgtattccttaagaagttccttggcttgaaccaatttcgacagtaagttgcggtaaacg 294
                ||||||||||| ||||||||||| || || |||||||| || |||| ||| |||||||| 
Sbjct: 22266167 acgtattccttgagaagttccttagcctggaccaatttggagagtatgttccggtaaaca 22266226

                                                                    
Query: 295      tcaaggtctctatccacgcnnnnnnnattgatgtttagagcagcgcaaagct 346
                || || || || || || |        |||||||||||||||||||||||||
Sbjct: 22266227 tcgagatccctgtcgacacttcttttgttgatgtttagagcagcgcaaagct 22266278
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>dbj|AP005195.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0567H04
          Length = 181420

 Score =  159 bits (80), Expect = 1e-35
 Identities = 124/136 (91%), Gaps = 2/136 (1%)
 Strand = Plus / Plus

                                                                         
Query: 345   cttgtccagtacggttggctccgtcgcatttgagagctcaagcaaacggaacaagccaac 404
             |||||| |||| ||||||||| || |||||||  ||||||||||||||||||||||||||
Sbjct: 72648 cttgtctagtatggttggctctgttgcatttgcaagctcaagcaaacggaacaagccaac 72707

                                                                         
Query: 405   agcaaagaacccggctgtagcctgaagtttcccttaccctgggccctttctgatatatct 464
              |||||||||| ||||||||| ||||| ||||||||||||||||||||||||| ||||||
Sbjct: 72708 tgcaaagaacc-ggctgtagc-tgaagcttcccttaccctgggccctttctgaaatatct 72765

                             
Query: 465   ttcagaatggactcta 480
             |||||||||| |||||
Sbjct: 72766 ttcagaatggcctcta 72781



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 89/112 (79%)
 Strand = Plus / Plus

                                                                         
Query: 235   acgtattccttaagaagttccttggcttgaaccaatttcgacagtaagttgcggtaaacg 294
             ||||||||||| ||||||||||| || || |||||||| || |||| ||| |||||||| 
Sbjct: 71413 acgtattccttgagaagttccttagcctggaccaatttggagagtatgttccggtaaaca 71472

                                                                 
Query: 295   tcaaggtctctatccacgcnnnnnnnattgatgtttagagcagcgcaaagct 346
             || || || || || || |        |||||||||||||||||||||||||
Sbjct: 71473 tcgagatccctgtcgacacttcttttgttgatgtttagagcagcgcaaagct 71524
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>dbj|AK059695.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-032-B12, full
            insert sequence
          Length = 1512

 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 110/135 (81%)
 Strand = Plus / Minus

                                                                        
Query: 212  ctctcttcttcttttccctctcgacgtattccttaagaagttccttggcttgaaccaatt 271
            ||||||||||||||||||| || ||||||||||| ||||||||||| || || |||||||
Sbjct: 1121 ctctcttcttcttttccctttccacgtattccttgagaagttccttagcctggaccaatt 1062

                                                                        
Query: 272  tcgacagtaagttgcggtaaacgtcaaggtctctatccacgcnnnnnnnattgatgttta 331
            | || |||| ||| |||||||| || || || || || || |        ||||||||||
Sbjct: 1061 tggagagtatgttccggtaaacatcgagatccctgtcgacacttcctttgttgatgttta 1002

                           
Query: 332  gagcagcgcaaagct 346
            |||||||||||||||
Sbjct: 1001 gagcagcgcaaagct 987
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>ref|NM_127659.1| Arabidopsis thaliana THF1 AT2G20890 (THF1) mRNA, complete cds
          Length = 1246

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                           
Query: 216 cttcttcttttccctctcgacgtattccttaagaagttccttggcttg 263
           ||||||||| ||||||||||| || |||||||| | ||||||||||||
Sbjct: 916 cttcttcttctccctctcgacatactccttaagcaattccttggcttg 869



 Score = 40.1 bits (20), Expect = 6.5
 Identities = 62/76 (81%)
 Strand = Plus / Minus

                                                                       
Query: 340 caaagcttgtccagtacggttggctccgtcgcatttgagagctcaagcaaacggaacaag 399
           |||||||||||||  || ||||| || || ||| |||  |||||||||||||| || |  
Sbjct: 792 caaagcttgtccaagacagttggatcagtagcacttgcaagctcaagcaaacgaaagagc 733

                           
Query: 400 ccaacagcaaagaacc 415
           |||||||| |||||||
Sbjct: 732 ccaacagcgaagaacc 717
to top
>gb|AY081596.1| Arabidopsis thaliana unknown protein (At2g20890) mRNA, complete cds
          Length = 953

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                           
Query: 216 cttcttcttttccctctcgacgtattccttaagaagttccttggcttg 263
           ||||||||| ||||||||||| || |||||||| | ||||||||||||
Sbjct: 801 cttcttcttctccctctcgacatactccttaagcaattccttggcttg 754



 Score = 40.1 bits (20), Expect = 6.5
 Identities = 62/76 (81%)
 Strand = Plus / Minus

                                                                       
Query: 340 caaagcttgtccagtacggttggctccgtcgcatttgagagctcaagcaaacggaacaag 399
           |||||||||||||  || ||||| || || ||| |||  |||||||||||||| || |  
Sbjct: 677 caaagcttgtccaagacagttggatcagtagcacttgcaagctcaagcaaacgaaagagc 618

                           
Query: 400 ccaacagcaaagaacc 415
           |||||||| |||||||
Sbjct: 617 ccaacagcgaagaacc 602
to top
>gb|AY062799.1| Arabidopsis thaliana Unknown protein (At2g20890; F5H14.14) mRNA,
           complete cds
          Length = 1143

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                           
Query: 216 cttcttcttttccctctcgacgtattccttaagaagttccttggcttg 263
           ||||||||| ||||||||||| || |||||||| | ||||||||||||
Sbjct: 911 cttcttcttctccctctcgacatactccttaagcaattccttggcttg 864



 Score = 40.1 bits (20), Expect = 6.5
 Identities = 62/76 (81%)
 Strand = Plus / Minus

                                                                       
Query: 340 caaagcttgtccagtacggttggctccgtcgcatttgagagctcaagcaaacggaacaag 399
           |||||||||||||  || ||||| || || ||| |||  |||||||||||||| || |  
Sbjct: 787 caaagcttgtccaagacagttggatcagtagcacttgcaagctcaagcaaacgaaagagc 728

                           
Query: 400 ccaacagcaaagaacc 415
           |||||||| |||||||
Sbjct: 727 ccaacagcgaagaacc 712
to top
>emb|BX818803.1|CNS0A8TL Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB15ZB02 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 324

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                           
Query: 216 cttcttcttttccctctcgacgtattccttaagaagttccttggcttg 263
           ||||||||| ||||||||||| || |||||||| | ||||||||||||
Sbjct: 88  cttcttcttctccctctcgacatactccttaagcaattccttggcttg 41
to top
>emb|BX820185.1|CNS0A8J4 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS88ZH01 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1158

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                           
Query: 216 cttcttcttttccctctcgacgtattccttaagaagttccttggcttg 263
           ||||||||| ||||||||||| || |||||||| | ||||||||||||
Sbjct: 905 cttcttcttctccctctcgacatactccttaagcaattccttggcttg 858
to top
>emb|BX820020.1|CNS0A8FF Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS62ZD04 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1131

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                           
Query: 216 cttcttcttttccctctcgacgtattccttaagaagttccttggcttg 263
           ||||||||| ||||||||||| || |||||||| | ||||||||||||
Sbjct: 877 cttcttcttctccctctcgacatactccttaagcaattccttggcttg 830



 Score = 40.1 bits (20), Expect = 6.5
 Identities = 62/76 (81%)
 Strand = Plus / Minus

                                                                       
Query: 340 caaagcttgtccagtacggttggctccgtcgcatttgagagctcaagcaaacggaacaag 399
           |||||||||||||  || ||||| || || ||| |||  |||||||||||||| || |  
Sbjct: 753 caaagcttgtccaagacagttggatcagtagcacttgcaagctcaagcaaacgaaagagc 694

                           
Query: 400 ccaacagcaaagaacc 415
           |||||||| |||||||
Sbjct: 693 ccaacagcgaagaacc 678
to top
>gb|AY087394.1| Arabidopsis thaliana clone 34875 mRNA, complete sequence
          Length = 1246

 Score = 48.1 bits (24), Expect = 0.027
 Identities = 42/48 (87%)
 Strand = Plus / Minus

                                                           
Query: 216 cttcttcttttccctctcgacgtattccttaagaagttccttggcttg 263
           ||||||||| ||||||||||| || |||||||| | ||| ||||||||
Sbjct: 916 cttcttcttctccctctcgacatactccttaagcaattcattggcttg 869



 Score = 40.1 bits (20), Expect = 6.5
 Identities = 62/76 (81%)
 Strand = Plus / Minus

                                                                       
Query: 340 caaagcttgtccagtacggttggctccgtcgcatttgagagctcaagcaaacggaacaag 399
           |||||||||||||  || ||||| || || ||| |||  |||||||||||||| || |  
Sbjct: 792 caaagcttgtccaagacagttggatcagtagcacttgcaagctcaagcaaacgaaagagc 733

                           
Query: 400 ccaacagcaaagaacc 415
           |||||||| |||||||
Sbjct: 732 ccaacagcgaagaacc 717
to top
>gb|AY899908.1| Arabidopsis thaliana chloroplast thylakoid formation 1 (THF1) mRNA,
           complete cds; nuclear gene for chloroplast product
          Length = 1245

 Score = 48.1 bits (24), Expect = 0.027
 Identities = 42/48 (87%)
 Strand = Plus / Minus

                                                           
Query: 216 cttcttcttttccctctcgacgtattccttaagaagttccttggcttg 263
           ||||||||| ||||||||||| || |||||||| | ||| ||||||||
Sbjct: 915 cttcttcttctccctctcgacatactccttaagcaattcattggcttg 868



 Score = 40.1 bits (20), Expect = 6.5
 Identities = 62/76 (81%)
 Strand = Plus / Minus

                                                                       
Query: 340 caaagcttgtccagtacggttggctccgtcgcatttgagagctcaagcaaacggaacaag 399
           |||||||||||||  || ||||| || || ||| |||  |||||||||||||| || |  
Sbjct: 791 caaagcttgtccaagacagttggatcagtagcacttgcaagctcaagcaaacgaaagagc 732

                           
Query: 400 ccaacagcaaagaacc 415
           |||||||| |||||||
Sbjct: 731 ccaacagcgaagaacc 716
to top
>gb|AC121803.3| Mus musculus BAC clone RP23-441A23 from chromosome 6, complete sequence
          Length = 211809

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 212   ctctcttcttcttttccctctc 233
             ||||||||||||||||||||||
Sbjct: 68122 ctctcttcttcttttccctctc 68143
to top
>dbj|AP004491.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT17G08, TM0023,
             complete sequence
          Length = 91039

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 205   ctctctgctctcttcttctttt 226
             ||||||||||||||||||||||
Sbjct: 32616 ctctctgctctcttcttctttt 32595
to top
>gb|AC105487.6| Rattus norvegicus 1 BAC CH230-229J7 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 221396

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 213   tctcttcttcttttccctctc 233
             |||||||||||||||||||||
Sbjct: 88719 tctcttcttcttttccctctc 88699
to top
>emb|BX908742.7| Zebrafish DNA sequence from clone DKEY-246G23 in linkage group 18,
             complete sequence
          Length = 232903

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 238   tattccttaagaagttccttg 258
             |||||||||||||||||||||
Sbjct: 12936 tattccttaagaagttccttg 12916
to top
>dbj|AK078026.1| Mus musculus 11 days embryo head cDNA, RIKEN full-length enriched
            library, clone:6230415J03 product:unclassifiable, full
            insert sequence
          Length = 1787

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 213  tctcttcttcttttccctctc 233
            |||||||||||||||||||||
Sbjct: 1109 tctcttcttcttttccctctc 1089
to top
>gb|AC113955.20| Mus musculus chromosome 7, clone RP23-402K24, complete sequence
          Length = 196206

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 213    tctcttcttcttttccctctc 233
              |||||||||||||||||||||
Sbjct: 118373 tctcttcttcttttccctctc 118353
to top
>emb|AL115993.1|CNS01CU9 Botrytis cinerea strain T4 cDNA library
          Length = 720

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 257 tggcttgaaccaatttcgaca 277
           |||||||||||||||||||||
Sbjct: 691 tggcttgaaccaatttcgaca 671
to top
>emb|AL116480.1|CNS01D7S Botrytis cinerea strain T4 cDNA library
          Length = 540

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 257 tggcttgaaccaatttcgaca 277
           |||||||||||||||||||||
Sbjct: 349 tggcttgaaccaatttcgaca 329
to top
>emb|AL683856.10| Mouse DNA sequence from clone RP23-46J2 on chromosome X, complete
              sequence
          Length = 224461

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 213    tctcttcttcttttccctctc 233
              |||||||||||||||||||||
Sbjct: 158791 tctcttcttcttttccctctc 158771
to top
>gb|AC117787.8| Mus musculus chromosome 1, clone RP24-546N2, complete sequence
          Length = 203962

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 206    tctctgctctcttcttcttttccc 229
              ||||||||||||||| ||||||||
Sbjct: 129668 tctctgctctcttctccttttccc 129691
to top
>ref|XM_529718.1| PREDICTED: Pan troglodytes LOC453671 (LOC453671), mRNA
          Length = 1007

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 243 cttaagaagttccttggctt 262
           ||||||||||||||||||||
Sbjct: 135 cttaagaagttccttggctt 154
to top
>gb|CP000066.1| Trypanosoma brucei chromosome 3, complete sequence
          Length = 1653225

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 449    cctttctgatatatctttcagaat 472
              |||||||||||||| |||||||||
Sbjct: 824942 cctttctgatatatttttcagaat 824965
to top
>gb|AC159446.1| Trypanosoma brucei chromosome 3 clone RPCI93-3K10, complete sequence
          Length = 91751

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 449   cctttctgatatatctttcagaat 472
             |||||||||||||| |||||||||
Sbjct: 31388 cctttctgatatatttttcagaat 31411
to top
>gb|AC113968.12| Mus musculus chromosome 8, clone RP23-120M17, complete sequence
          Length = 220191

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 213   tctcttcttcttttccctct 232
             ||||||||||||||||||||
Sbjct: 16214 tctcttcttcttttccctct 16195
to top
>gb|AC116812.10| Mus musculus chromosome 15, clone RP24-357G13, complete sequence
          Length = 183993

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 204   tctctctgctctcttcttct 223
             ||||||||||||||||||||
Sbjct: 22366 tctctctgctctcttcttct 22385
to top
>gb|AC099572.12| Mus musculus chromosome 15, clone RP23-16A17, complete sequence
          Length = 200229

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 204  tctctctgctctcttcttct 223
            ||||||||||||||||||||
Sbjct: 5312 tctctctgctctcttcttct 5293
to top
>gb|AC116871.6| Mus musculus chromosome 19, clone RP24-417P12, complete sequence
          Length = 161959

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 204   tctctctgctctcttcttct 223
             ||||||||||||||||||||
Sbjct: 49162 tctctctgctctcttcttct 49181
to top
>ref|NG_000008.6| Homo sapiens cytochrome P450, family 2, subfamily A (CYP2A) on
             chromosome 19
          Length = 413528

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 203   atctctctgctctcttcttctttt 226
             ||||||||||| ||||||||||||
Sbjct: 20020 atctctctgctgtcttcttctttt 20043
to top
>gb|AC089992.2| Bos taurus clone RP42-210F11, complete sequence
          Length = 147922

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 204   tctctctgctctcttcttct 223
             ||||||||||||||||||||
Sbjct: 69562 tctctctgctctcttcttct 69581
to top
>gb|AC164532.4| Mus musculus chromosome 7, clone RP24-64B10, complete sequence
          Length = 206573

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 204   tctctctgctctcttcttct 223
             ||||||||||||||||||||
Sbjct: 75337 tctctctgctctcttcttct 75356
to top
>gb|DP000008.1| Bos taurus target 1 genomic scaffold
          Length = 2072671

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 204     tctctctgctctcttcttct 223
               ||||||||||||||||||||
Sbjct: 1297735 tctctctgctctcttcttct 1297754
to top
>ref|XM_947168.1| Theileria annulata strain Ankara exonuclease (TA13280) partial mRNA
          Length = 3363

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 223 ttttccctctcgacgtattcctta 246
           |||||||||||||| |||||||||
Sbjct: 956 ttttccctctcgacatattcctta 933
to top
>emb|CR854896.11| Zebrafish DNA sequence from clone DKEY-239B8 in linkage group 13,
              complete sequence
          Length = 165556

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 204    tctctctgctctcttcttct 223
              ||||||||||||||||||||
Sbjct: 100624 tctctctgctctcttcttct 100605



 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 204   tctctctgctctcttcttct 223
             ||||||||||||||||||||
Sbjct: 71564 tctctctgctctcttcttct 71545
to top
>emb|AL772182.3| Human DNA sequence from clone RP11-36K22 on chromosome X, complete
             sequence
          Length = 161047

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 198   ctccaatctctctgctctct 217
             ||||||||||||||||||||
Sbjct: 36550 ctccaatctctctgctctct 36531
to top
>gb|AY342161.1| Solanum tuberosum cultivar Kennebec light-regulated
           chloroplast-localized protein (Thf1) mRNA, complete cds;
           nuclear gene for chloroplast product
          Length = 1281

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 80/100 (80%)
 Strand = Plus / Minus

                                                                       
Query: 212 ctctcttcttcttttccctctcgacgtattccttaagaagttccttggcttgaaccaatt 271
           ||||||| ||||| ||||| || ||||||||||| |  || || || || |||||||  |
Sbjct: 895 ctctctttttcttctccctttccacgtattccttcaacagctctttagcctgaaccagct 836

                                                   
Query: 272 tcgacagtaagttgcggtaaacgtcaaggtctctatccac 311
           | || || || ||||| |||||||||||||| | ||||||
Sbjct: 835 tggagagcaaattgcgataaacgtcaaggtcccgatccac 796
to top
>gb|AC128353.6| Rattus norvegicus 13 BAC CH230-148A5 (Children's Hospital Oakland
              Research Institute) complete sequence
          Length = 207556

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 210    tgctctcttcttcttttccctctc 233
              |||||||||||||| |||||||||
Sbjct: 122070 tgctctcttcttctcttccctctc 122047
to top
>emb|AL161624.7| Human DNA sequence from clone RP11-487I9 on chromosome X Contains part
             of the DIAPH2 gene for Drosophila diaphanous homolog 2 and
             the 3' end of a novel gene (EPAG), complete sequence
          Length = 133021

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 78    atgtataactgttaatatct 97
             ||||||||||||||||||||
Sbjct: 49628 atgtataactgttaatatct 49609
to top
>emb|AL135785.10| Human DNA sequence from clone RP11-113O24 on chromosome 9p11-13.3
              Contains a novel gene, possible ortholog of mouse
              insulin-like growth factor binding protein 7 (IGFBP7), a
              novel gene similar to aldehyde dehydrogenase 1 family,
              member B1 (ALDH5, ALDHX, MGC2230) (ALDH1B1), a novel gene
              and four CpG islands, complete sequence
          Length = 166207

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 288    gtaaacgtcaaggtctctat 307
              ||||||||||||||||||||
Sbjct: 135197 gtaaacgtcaaggtctctat 135216
to top
>emb|BX842632.1| Neurospora crassa DNA linkage group I BAC contig B5K2
          Length = 86737

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 24    acaccacgctaagagcagcc 43
             ||||||||||||||||||||
Sbjct: 41587 acaccacgctaagagcagcc 41568
to top
>emb|BX901922.9| Zebrafish DNA sequence from clone DKEY-33C12 in linkage group 13,
              complete sequence
          Length = 242350

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 204    tctctctgctctcttcttct 223
              ||||||||||||||||||||
Sbjct: 187137 tctctctgctctcttcttct 187156



 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 204    tctctctgctctcttcttct 223
              ||||||||||||||||||||
Sbjct: 157745 tctctctgctctcttcttct 157764
to top
>emb|BX000359.7| Mouse DNA sequence from clone RP23-343C18 on chromosome 11 Contains the
             gene for a novel helix-loop-helix DNA-binding domain
             containing protein, a novel gene, the Gosr1 gene for golgi
             SNAP receptor complex member 1 and a CpG island, complete
             sequence
          Length = 118586

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 212   ctctcttcttcttttccctc 231
             ||||||||||||||||||||
Sbjct: 34246 ctctcttcttcttttccctc 34265
to top
>emb|AL845307.29| Zebrafish DNA sequence from clone DKEY-56N17 in linkage group 13,
              complete sequence
          Length = 135795

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 204    tctctctgctctcttcttct 223
              ||||||||||||||||||||
Sbjct: 120423 tctctctgctctcttcttct 120442
to top
>emb|CR848040.6| Zebrafish DNA sequence from clone DKEY-19P15 in linkage group 13,
             complete sequence
          Length = 146215

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 204   tctctctgctctcttcttct 223
             ||||||||||||||||||||
Sbjct: 40145 tctctctgctctcttcttct 40164
to top
>dbj|AP008230.1| Desulfitobacterium hafniense Y51 genomic DNA, complete genome
          Length = 5727534

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 254     ccttggcttgaaccaatttc 273
               ||||||||||||||||||||
Sbjct: 2294119 ccttggcttgaaccaatttc 2294138
to top
>gb|AF479287.1| Mus musculus PHF5B (Phf5b) pseudogene, complete sequence
          Length = 5285

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 204  tctctctgctctcttcttct 223
            ||||||||||||||||||||
Sbjct: 3719 tctctctgctctcttcttct 3738
to top
>gb|AC074312.64| Mus musculus strain C57BL/6J clone rp23-311c19 map 7, complete sequence
          Length = 220077

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 204   tctctctgctctcttcttct 223
             ||||||||||||||||||||
Sbjct: 37435 tctctctgctctcttcttct 37416
to top
>gb|AC006234.4| Arabidopsis thaliana chromosome 2 clone F5H14 map mi148, complete
             sequence
          Length = 129667

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                 
Query: 228   cctctcgacgtattccttaagaagttccttggcttg 263
             ||||||||| || |||||||| | ||||||||||||
Sbjct: 42757 cctctcgacatactccttaagcaattccttggcttg 42792
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>gb|AC016251.9| Homo sapiens chromosome 15, clone RP11-759A24, complete sequence
          Length = 182943

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 243    cttaagaagttccttggctt 262
              ||||||||||||||||||||
Sbjct: 119228 cttaagaagttccttggctt 119247
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>gb|AC012409.9| Homo sapiens chromosome 15, clone RP11-327J17, complete sequence
          Length = 183014

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 243   cttaagaagttccttggctt 262
             ||||||||||||||||||||
Sbjct: 48887 cttaagaagttccttggctt 48906
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>gb|AC099538.2| Homo sapiens chromosome 3 clone RP11-90I9, complete sequence
          Length = 170033

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 129  gttgagttaatgcttcaagg 148
            ||||||||||||||||||||
Sbjct: 6476 gttgagttaatgcttcaagg 6495
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 204      tctctctgctctcttcttcttttc 227
                ||||||| ||||||||||||||||
Sbjct: 16997189 tctctctcctctcttcttcttttc 16997166



 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 204      tctctctgctctcttcttcttttc 227
                ||||||| ||||||||||||||||
Sbjct: 16976888 tctctctcctctcttcttcttttc 16976865
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>emb|BX818901.1|CNS0A8Y0 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB24ZE08 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1114

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                               
Query: 228 cctctcgacgtattccttaagaagttccttggcttg 263
           ||||||||| || |||||||| | ||||||||||||
Sbjct: 886 cctctcgacatactccttaagcaattccttggcttg 851



 Score = 40.1 bits (20), Expect = 6.5
 Identities = 62/76 (81%)
 Strand = Plus / Minus

                                                                       
Query: 340 caaagcttgtccagtacggttggctccgtcgcatttgagagctcaagcaaacggaacaag 399
           |||||||||||||  || ||||| || || ||| |||  |||||||||||||| || |  
Sbjct: 774 caaagcttgtccaagacagttggatcagtagcacttgcaagctcaagcaaacgaaagagc 715

                           
Query: 400 ccaacagcaaagaacc 415
           |||||||| |||||||
Sbjct: 714 ccaacagcgaagaacc 699
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>gb|AC008537.5|AC008537 Homo sapiens chromosome 19 clone CTC-490E21, complete sequence
          Length = 169089

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 203   atctctctgctctcttcttctttt 226
             ||||||||||| ||||||||||||
Sbjct: 41020 atctctctgctgtcttcttctttt 41043
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>gb|AC099053.2| Homo sapiens chromosome 3 clone RP11-464H2, complete sequence
          Length = 200069

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 129    gttgagttaatgcttcaagg 148
              ||||||||||||||||||||
Sbjct: 172320 gttgagttaatgcttcaagg 172339
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>gb|AC023795.18| Homo sapiens 12 BAC RP11-242B24 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 161838

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 207    ctctgctctcttcttctttt 226
              ||||||||||||||||||||
Sbjct: 101981 ctctgctctcttcttctttt 102000
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>dbj|AK173094.1| Mus musculus premature mRNA for mKIAA1067 protein
          Length = 6719

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 205  ctctctgctctcttcttctt 224
            ||||||||||||||||||||
Sbjct: 1932 ctctctgctctcttcttctt 1951
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>gb|AC153611.12| Mus musculus 6 BAC RP23-110P14 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 174538

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 204   tctctctgctctcttcttct 223
             ||||||||||||||||||||
Sbjct: 67099 tctctctgctctcttcttct 67118
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>emb|AL929156.10| Mouse DNA sequence from clone RP23-475H18 on chromosome 2, complete
              sequence
          Length = 206918

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 214    ctcttcttcttttccctctc 233
              ||||||||||||||||||||
Sbjct: 117334 ctcttcttcttttccctctc 117353
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 204      tctctctgctctcttcttcttttc 227
                ||||||| ||||||||||||||||
Sbjct: 16950422 tctctctcctctcttcttcttttc 16950399



 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 204      tctctctgctctcttcttcttttc 227
                ||||||| ||||||||||||||||
Sbjct: 16930121 tctctctcctctcttcttcttttc 16930098
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>emb|AL732639.5|CNS08C9E Oryza sativa chromosome 12, . BAC OSJNBa0038H18 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 150238

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 204    tctctctgctctcttcttcttttc 227
              ||||||| ||||||||||||||||
Sbjct: 119232 tctctctcctctcttcttcttttc 119209



 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 204   tctctctgctctcttcttcttttc 227
             ||||||| ||||||||||||||||
Sbjct: 98931 tctctctcctctcttcttcttttc 98908
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>gb|L47539.1|HEACRP Haemophilus somnus cyclic AMP receptor protein (crp) gene, complete
           cds
          Length = 752

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 175 acagcctcgttcggcttggg 194
           ||||||||||||||||||||
Sbjct: 359 acagcctcgttcggcttggg 378
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>emb|AL645861.12| Mouse DNA sequence from clone RP23-184G6 on chromosome 11, complete
             sequence
          Length = 212385

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 205   ctctctgctctcttcttctt 224
             ||||||||||||||||||||
Sbjct: 47200 ctctctgctctcttcttctt 47181
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>dbj|AP001091.5| Homo sapiens genomic DNA, chromosome 18p clone:RP11-713N19, complete
             sequences
          Length = 207785

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 214   ctcttcttcttttccctctc 233
             ||||||||||||||||||||
Sbjct: 13020 ctcttcttcttttccctctc 13039


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,646,750
Number of Sequences: 3902068
Number of extensions: 3646750
Number of successful extensions: 76589
Number of sequences better than 10.0: 70
Number of HSP's better than 10.0 without gapping: 69
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 76324
Number of HSP's gapped (non-prelim): 253
length of query: 480
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 458
effective length of database: 17,147,199,772
effective search space: 7853417495576
effective search space used: 7853417495576
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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