>RLUB_PSEAE (Q9HZ55) Ribosomal large subunit pseudouridine synthase B (EC|
           5.4.99.-) (rRNA-uridine isomerase B) (rRNA
           pseudouridylate synthase B)
          Length = 386

 Score = 30.8 bits (68), Expect = 2.0
 Identities = 19/49 (38%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
 Frame = -3

Query: 480 PEEGA-HAHLQADREAGLVRHRGDGLRRGPQDEAHDRGQEQGTPHLDHP 337
           PE G   A  + D E    R       RGPQ  A  +G+EQGTP  + P
Sbjct: 289 PEAGRKRAPRREDGENAARRAPASRPARGPQPSAERKGREQGTPVAERP 337

>ACRBP_HUMAN (Q8NEB7) Acrosin-binding protein precursor (Proacrosin-binding|
           protein sp32) (Cancer testis antigen OY-TES-1)
          Length = 543

 Score = 30.0 bits (66), Expect = 3.4
 Identities = 18/66 (27%), Positives = 30/66 (45%)
 Frame = -3

Query: 408 LRRGPQDEAHDRGQEQGTPHLDHPL*YVHRQG*PLQDHLQDAHRAQEDLPRLRLRQSGRW 229
           L  G Q++A +  QEQG  H   P           Q+H Q+  + QE+    +  +  + 
Sbjct: 184 LSLGGQEQAPEHKQEQGVEHRQEPT----------QEHKQEEGQKQEEQEEEQEEEGKQE 233

Query: 228 QGQGPR 211
           +GQG +
Sbjct: 234 EGQGTK 239

>COBF_PSEDE (P21636) Precorrin-6A synthase [deacetylating] (EC 2.1.1.152)|
          Length = 261

 Score = 29.6 bits (65), Expect = 4.4
 Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
 Frame = -1

Query: 374 GVKSKELL-IWITLCDMYIDKDDPSKITFKTPTGLRRTFPVSAFGKVDDGKAKV 216
           G K  EL  +   +C  Y+ + D   + F  P  +RRT  VS  G VDD  A++
Sbjct: 42  GAKKTELAEVRRDICARYVTRKDSRTVEFAVP--VRRTEGVSYDGSVDDWHAQI 93

>OPT3_CAEEL (O01840) Putative oligopeptide transporter opt-3|
          Length = 701

 Score = 29.3 bits (64), Expect = 5.8
 Identities = 26/69 (37%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
 Frame = +1

Query: 274 SPVGVLKVILEGSSLSMYISQRVIQMRSSLLLTPVMRFILRSST--KAVTSVAYETCLPI 447
           S  G  KVIL GSS+  Y+   V+    SL   P + + +RSS     +  +A+ T    
Sbjct: 77  SVFGRFKVILYGSSI--YVVGHVLL---SLGAVPFLSYPIRSSLDFSGLFVIAFATG--- 128

Query: 448 CLKVCVSAF 474
           C+K CVSAF
Sbjct: 129 CIKPCVSAF 137

>RF1_MYCPN (P75420) Peptide chain release factor 1 (RF-1)|
          Length = 359

 Score = 28.9 bits (63), Expect = 7.6
 Identities = 14/44 (31%), Positives = 23/44 (52%)
 Frame = -1

Query: 485 LRQKKALTHTFKQIGRQVSYATEVTAFVEDRKMKRMTGVKSKEL 354
           L+ K+ L   FK+  R +  A E  A +E+ ++K +     KEL
Sbjct: 42  LKHKQPLVVKFKEFKRLIDQALEAEAILENNELKELHDEAKKEL 85

>E41L4_BRARE (O57457) Band 4.1-like protein 4 (Nbl4 protein)|
          Length = 619

 Score = 28.5 bits (62), Expect = 9.9
 Identities = 14/49 (28%), Positives = 26/49 (53%)
 Frame = -1

Query: 158 YQQATRVWMKIF*RKKFERRVIQLSSTTTTCFENLQSNSGCKSLYNICI 12
           + + T+V+ K     +FE RV+      T+ F +  S + CK+L+  C+
Sbjct: 244 WPRITKVYFK---ETQFELRVLGRDCNETSFFFDAASKTACKNLWKCCV 289

>MMTA2_HUMAN (Q9BU76) Multiple myeloma tumor-associated protein 2 (hMMTAG2)|
          Length = 263

 Score = 28.5 bits (62), Expect = 9.9
 Identities = 16/43 (37%), Positives = 19/43 (44%), Gaps = 3/43 (6%)
 Frame = -3

Query: 483 SPEEGAHAHLQADREAGLVRHRG---DGLRRGPQDEAHDRGQE 364
           SPE   H H  +D  +   + R     G RR P    HDRG E
Sbjct: 220 SPERPRHHHHDSDSNSPCCKRRKRGHSGDRRSPSRRWHDRGSE 262


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 53,473,580
Number of Sequences: 219361
Number of extensions: 969915
Number of successful extensions: 2869
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2820
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2869
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3362826254
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)