>LMP1_EBV (P03230) Latent membrane protein 1 (LMP-1) (Protein p63) [Contains:|
           Protein p25]
          Length = 386

 Score = 29.3 bits (64), Expect = 9.5
 Identities = 14/35 (40%), Positives = 18/35 (51%)
 Frame = -2

Query: 217 LVLSVW*L**GTQHIDAHGHDDSLAFMDQPTCNHG 113
           L + +W    G +H D H HDDSL    Q T + G
Sbjct: 178 LAILIWMYYHGQRHSDEHHHDDSLPHPQQATDDSG 212


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 84,162,940
Number of Sequences: 219361
Number of extensions: 1611824
Number of successful extensions: 3138
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 3070
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3138
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5481822624
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)