ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd2g08
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AF427791.1| Hordeum vulgare Mla locus, complete sequence 325 1e-85
2emb|AL031661.28|HS404H4 Human DNA sequence from clone RP3-404H4 ... 44 0.53
3ref|XM_522017.1| PREDICTED: Pan troglodytes similar to hypotheti... 42 2.1
4ref|XM_617618.2| PREDICTED: Bos taurus similar to expressed sequ... 42 2.1
5ref|XM_872692.1| PREDICTED: Bos taurus similar to expressed sequ... 42 2.1
6ref|XM_847008.1| PREDICTED: Canis familiaris similar to expresse... 42 2.1
7gb|AC143341.8| Medicago truncatula clone mth2-7a11, complete seq... 42 2.1
8gb|AF161269.1| Oryza sativa (japonica cultivar-group) chromosome... 42 2.1
9gb|AC099321.5| Danio rerio clone 35K4, complete sequence 42 2.1
10emb|CR859697.1| Pongo pygmaeus mRNA; cDNA DKFZp468F248 (from clo... 42 2.1
11dbj|AK127943.1| Homo sapiens cDNA FLJ46053 fis, clone SYNOV4004210 42 2.1
12gb|AC010016.6| Drosophila melanogaster 3L BAC RP98-10M10 (Roswel... 42 2.1
13emb|BX571770.5| Zebrafish DNA sequence from clone DKEY-276I5 in ... 42 2.1
14gb|AC010558.4| Drosophila melanogaster 3L BAC RPCI98-1K9 (Roswel... 42 2.1
15dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.1
16gb|AC008282.4| Homo sapiens BAC clone RP11-516B14 from 2, comple... 42 2.1
17dbj|AK068037.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.1
18gb|AF119222.1|AF119222 Oryza sativa BAC clone 1.H19, complete se... 42 2.1
19gb|AE003548.3| Drosophila melanogaster chromosome 3L, section 37... 42 2.1
20dbj|AP000442.6| Homo sapiens genomic DNA, chromosome 11q, clone:... 42 2.1
21dbj|AP000640.5| Homo sapiens genomic DNA, chromosome 11 clone:CM... 42 2.1
22emb|AL831992.2|HSM803299 Homo sapiens mRNA; cDNA DKFZp451I053 (f... 42 2.1
23gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 42 2.1
24gb|CP000226.1| Drosophila melanogaster genomic scaffold 21100002... 42 2.1
25emb|AL590997.13| Mouse DNA sequence from clone RP23-132J20 on ch... 42 2.1
26gb|AC108882.4| Homo sapiens chromosome X clone RP11-77G22 map p1... 40 8.3
27gb|AC092474.3| Homo sapiens chromosome X clone RP11-169L17 map p... 40 8.3
28gb|BC058941.1| Mus musculus expressed sequence AV312086, mRNA (c... 40 8.3
29gb|BC070661.1| Xenopus laevis cDNA clone IMAGE:4032049, partial cds 40 8.3
30gb|AC115116.6| Mus musculus BAC clone RP23-62I3 from chromosome ... 40 8.3
31gb|AC124464.3| Mus musculus BAC clone RP24-155I15 from chromosom... 40 8.3
32gb|AC126266.3| Mus musculus BAC clone RP23-402N17 from chromosom... 40 8.3
33ref|XM_644429.1| Entamoeba histolytica HM-1:IMSS exonuclease (29... 40 8.3
34emb|CR718097.2|CNS0GH13 Tetraodon nigroviridis full-length cDNA 40 8.3
35emb|AL161631.20| Human DNA sequence from clone RP11-70K10 on chr... 40 8.3
36emb|AL121949.13|HSDJ407E4 Human DNA sequence from clone RP3-407E... 40 8.3
37emb|AL049589.15|HSJ570L12 Human DNA sequence from clone RP4-570L... 40 8.3
38emb|X52615.1|PFCELB Cellvibrio japonicus celB gene for endogluca... 40 8.3
39emb|CR381673.7| Zebrafish DNA sequence from clone CH211-209J3 in... 40 8.3
40dbj|AK150301.1| Mus musculus bone marrow macrophage cDNA, RIKEN ... 40 8.3
41dbj|AK154102.1| Mus musculus NOD-derived CD11c +ve dendritic cel... 40 8.3
42dbj|AK170918.1| Mus musculus NOD-derived CD11c +ve dendritic cel... 40 8.3
43dbj|AK170745.1| Mus musculus NOD-derived CD11c +ve dendritic cel... 40 8.3
44dbj|AK170408.1| Mus musculus NOD-derived CD11c +ve dendritic cel... 40 8.3
45dbj|AK087559.1| Mus musculus 0 day neonate eyeball cDNA, RIKEN f... 40 8.3
46dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.3
47ref|NM_172635.1| Mus musculus expressed sequence AV312086 (AV312... 40 8.3
48gb|BC093583.1| Xenopus laevis cDNA clone IMAGE:6866498, containi... 40 8.3
49dbj|AP002860.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.3
50dbj|AB084515.1| Candida parapsilosis cpr-c1 gene for conjugated ... 40 8.3
51ref|XM_560068.1| Anopheles gambiae str. PEST ENSANGP00000028861 ... 40 8.3
52gb|AC158772.5| Mus musculus chromosome 18, clone RP23-291M14, co... 40 8.3
53gb|AC115692.6| Mus musculus chromosome 18, clone RP23-463G11, co... 40 8.3
54dbj|AP000852.4| Homo sapiens genomic DNA, chromosome 11q, clone:... 40 8.3
55emb|CT025633.3| Pan troglodytes chromosome X clone RP43-007L03 m... 40 8.3 
>gb|AF427791.1| Hordeum vulgare Mla locus, complete sequence
          Length = 261265

 Score =  325 bits (164), Expect = 1e-85
 Identities = 182/188 (96%)
 Strand = Plus / Plus

                                                                          
Query: 1      tggttactatgaaagacttcaaatggtccagaacacacaagtttgtatctacatgcacaa 60
              ||||||||| || |||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 135134 tggttactacgagagacttcagatggtccagaacacacaagtttgtatctacatgcacaa 135193

                                                                          
Query: 61     agtgcaagctccaaaacactcgaaacaccaaatgatctacaagacaataaggtccatgat 120
              |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 135194 agtgcaagctccaaaacactcgaaacaccaaatggtctacaagacaataaggtccatgat 135253

                                                                          
Query: 121    tacaggttggttggtccataaacgctagagagtcatcatgtccatgtgcatcaatatgtt 180
              |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||
Sbjct: 135254 tacaggttggttggtccataaacgctggagagtcatcatgtccatgtgcatcaataggtt 135313

                      
Query: 181    gagtacct 188
              ||||||||
Sbjct: 135314 gagtacct 135321



 Score =  325 bits (164), Expect = 1e-85
 Identities = 182/188 (96%)
 Strand = Plus / Plus

                                                                         
Query: 1     tggttactatgaaagacttcaaatggtccagaacacacaagtttgtatctacatgcacaa 60
             ||||||||| || |||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 95421 tggttactacgagagacttcagatggtccagaacacacaagtttgtatctacatgcacaa 95480

                                                                         
Query: 61    agtgcaagctccaaaacactcgaaacaccaaatgatctacaagacaataaggtccatgat 120
             |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 95481 agtgcaagctccaaaacactcgaaacaccaaatggtctacaagacaataaggtccatgat 95540

                                                                         
Query: 121   tacaggttggttggtccataaacgctagagagtcatcatgtccatgtgcatcaatatgtt 180
             |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||
Sbjct: 95541 tacaggttggttggtccataaacgctggagagtcatcatgtccatgtgcatcaataggtt 95600

                     
Query: 181   gagtacct 188
             ||||||||
Sbjct: 95601 gagtacct 95608
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>emb|AL031661.28|HS404H4 Human DNA sequence from clone RP3-404H4 on chromosome 20q12-13.13
              Contains STSs and GSSs, complete sequence
          Length = 155867

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 345    gtcttcatcttcatccacccta 366
              ||||||||||||||||||||||
Sbjct: 106361 gtcttcatcttcatccacccta 106382
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>ref|XM_522017.1| PREDICTED: Pan troglodytes similar to hypothetical protein
            (LOC466618), mRNA
          Length = 3771

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 337  tgaaatgcgtcttcatcttcatcca 361
            |||||||| ||||||||||||||||
Sbjct: 1535 tgaaatgcatcttcatcttcatcca 1511
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>ref|XM_617618.2| PREDICTED: Bos taurus similar to expressed sequence AV312086,
           transcript variant 1 (LOC537453), mRNA
          Length = 2432

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 337 tgaaatgcgtcttcatcttcatcca 361
           |||||||| ||||||||||||||||
Sbjct: 175 tgaaatgcatcttcatcttcatcca 151
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>ref|XM_872692.1| PREDICTED: Bos taurus similar to expressed sequence AV312086,
           transcript variant 3 (LOC537453), mRNA
          Length = 4328

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 337 tgaaatgcgtcttcatcttcatcca 361
           |||||||| ||||||||||||||||
Sbjct: 175 tgaaatgcatcttcatcttcatcca 151
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>ref|XM_847008.1| PREDICTED: Canis familiaris similar to expressed sequence AV312086
           (LOC609696), mRNA
          Length = 2430

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 337 tgaaatgcgtcttcatcttcatcca 361
           |||||||| ||||||||||||||||
Sbjct: 173 tgaaatgcatcttcatcttcatcca 149
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>gb|AC143341.8| Medicago truncatula clone mth2-7a11, complete sequence
          Length = 111446

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 520   aatgtataaaatcatcatttt 540
             |||||||||||||||||||||
Sbjct: 41774 aatgtataaaatcatcatttt 41794
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>gb|AF161269.1| Oryza sativa (japonica cultivar-group) chromosome 11 clone
            OSJNBa0034K24, complete sequence
          Length = 142852

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 346  tcttcatcttcatccacccta 366
            |||||||||||||||||||||
Sbjct: 8034 tcttcatcttcatccacccta 8054
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>gb|AC099321.5| Danio rerio clone 35K4, complete sequence
          Length = 71132

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 345   gtcttcatcttcatccaccct 365
             |||||||||||||||||||||
Sbjct: 39283 gtcttcatcttcatccaccct 39263
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>emb|CR859697.1| Pongo pygmaeus mRNA; cDNA DKFZp468F248 (from clone DKFZp468F248)
          Length = 3111

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 337 tgaaatgcgtcttcatcttcatcca 361
           |||||||| ||||||||||||||||
Sbjct: 151 tgaaatgcatcttcatcttcatcca 127
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>dbj|AK127943.1| Homo sapiens cDNA FLJ46053 fis, clone SYNOV4004210
          Length = 2886

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 337 tgaaatgcgtcttcatcttcatcca 361
           |||||||| ||||||||||||||||
Sbjct: 162 tgaaatgcatcttcatcttcatcca 138
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>gb|AC010016.6| Drosophila melanogaster 3L BAC RP98-10M10 (Roswell Park Cancer
             Institute Drosophila BAC Library) complete sequence
          Length = 174616

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 72    caaaacactcgaaacaccaaa 92
             |||||||||||||||||||||
Sbjct: 16971 caaaacactcgaaacaccaaa 16991
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>emb|BX571770.5| Zebrafish DNA sequence from clone DKEY-276I5 in linkage group 24,
              complete sequence
          Length = 210504

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 345    gtcttcatcttcatccaccct 365
              |||||||||||||||||||||
Sbjct: 175862 gtcttcatcttcatccaccct 175882
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>gb|AC010558.4| Drosophila melanogaster 3L BAC RPCI98-1K9 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 170356

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 72     caaaacactcgaaacaccaaa 92
              |||||||||||||||||||||
Sbjct: 135455 caaaacactcgaaacaccaaa 135475
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 346      tcttcatcttcatccacccta 366
                |||||||||||||||||||||
Sbjct: 23378941 tcttcatcttcatccacccta 23378921
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>gb|AC008282.4| Homo sapiens BAC clone RP11-516B14 from 2, complete sequence
          Length = 203241

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 44    tgtatctacatgcacaaagtg 64
             |||||||||||||||||||||
Sbjct: 83660 tgtatctacatgcacaaagtg 83680
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>dbj|AK068037.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013132K16, full
           insert sequence
          Length = 1032

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 346 tcttcatcttcatccacccta 366
           |||||||||||||||||||||
Sbjct: 603 tcttcatcttcatccacccta 583
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>gb|AF119222.1|AF119222 Oryza sativa BAC clone 1.H19, complete sequence
          Length = 77605

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 346 tcttcatcttcatccacccta 366
           |||||||||||||||||||||
Sbjct: 629 tcttcatcttcatccacccta 649
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>gb|AE003548.3| Drosophila melanogaster chromosome 3L, section 37 of 83 of the complete
              sequence
          Length = 244140

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 72     caaaacactcgaaacaccaaa 92
              |||||||||||||||||||||
Sbjct: 146740 caaaacactcgaaacaccaaa 146760
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>dbj|AP000442.6| Homo sapiens genomic DNA, chromosome 11q, clone:CMB9-60A24, complete
              sequence
          Length = 117502

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 337    tgaaatgcgtcttcatcttcatcca 361
              |||||||| ||||||||||||||||
Sbjct: 108533 tgaaatgcatcttcatcttcatcca 108557
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>dbj|AP000640.5| Homo sapiens genomic DNA, chromosome 11 clone:CMB9-26D16, complete
            sequence
          Length = 156734

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 337  tgaaatgcgtcttcatcttcatcca 361
            |||||||| ||||||||||||||||
Sbjct: 6229 tgaaatgcatcttcatcttcatcca 6253
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>emb|AL831992.2|HSM803299 Homo sapiens mRNA; cDNA DKFZp451I053 (from clone DKFZp451I053)
          Length = 4086

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 337 tgaaatgcgtcttcatcttcatcca 361
           |||||||| ||||||||||||||||
Sbjct: 143 tgaaatgcatcttcatcttcatcca 119
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 346      tcttcatcttcatccacccta 366
                |||||||||||||||||||||
Sbjct: 23688851 tcttcatcttcatccacccta 23688831
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>gb|CP000226.1| Drosophila melanogaster genomic scaffold 211000022280776
          Length = 277780

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 61    agtgcaagctccaaaacactc 81
             |||||||||||||||||||||
Sbjct: 88698 agtgcaagctccaaaacactc 88718
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>emb|AL590997.13| Mouse DNA sequence from clone RP23-132J20 on chromosome 11, complete
              sequence
          Length = 200602

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 380    gagcatttccatatcagaaac 400
              |||||||||||||||||||||
Sbjct: 195180 gagcatttccatatcagaaac 195160



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 380    gagcatttccatatcagaaac 400
              |||||||||||||||||||||
Sbjct: 189647 gagcatttccatatcagaaac 189627
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>gb|AC108882.4| Homo sapiens chromosome X clone RP11-77G22 map p11.4, complete sequence
          Length = 173352

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 321   gaactctatcacagtttgaa 340
             ||||||||||||||||||||
Sbjct: 82850 gaactctatcacagtttgaa 82831
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>gb|AC092474.3| Homo sapiens chromosome X clone RP11-169L17 map p11.4, complete sequence
          Length = 170227

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 321    gaactctatcacagtttgaa 340
              ||||||||||||||||||||
Sbjct: 168444 gaactctatcacagtttgaa 168425
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>gb|BC058941.1| Mus musculus expressed sequence AV312086, mRNA (cDNA clone
           MGC:66563 IMAGE:6825758), complete cds
          Length = 4071

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 336 ttgaaatgcgtcttcatcttcatc 359
           ||||||||| ||||||||||||||
Sbjct: 165 ttgaaatgcatcttcatcttcatc 142
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>gb|BC070661.1| Xenopus laevis cDNA clone IMAGE:4032049, partial cds
          Length = 1975

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 346  tcttcatcttcatccaccct 365
            ||||||||||||||||||||
Sbjct: 1487 tcttcatcttcatccaccct 1468
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>gb|AC115116.6| Mus musculus BAC clone RP23-62I3 from chromosome 1, complete sequence
          Length = 231896

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 59     aaagtgcaagctccaaaaca 78
              ||||||||||||||||||||
Sbjct: 150469 aaagtgcaagctccaaaaca 150488
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>gb|AC124464.3| Mus musculus BAC clone RP24-155I15 from chromosome 19, complete
             sequence
          Length = 188587

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 336   ttgaaatgcgtcttcatcttcatc 359
             ||||||||| ||||||||||||||
Sbjct: 39520 ttgaaatgcatcttcatcttcatc 39497
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>gb|AC126266.3| Mus musculus BAC clone RP23-402N17 from chromosome 19, complete sequence
          Length = 205037

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 336    ttgaaatgcgtcttcatcttcatc 359
              ||||||||| ||||||||||||||
Sbjct: 184540 ttgaaatgcatcttcatcttcatc 184517
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>ref|XM_644429.1| Entamoeba histolytica HM-1:IMSS exonuclease (293.t00010)  partial
            mRNA
          Length = 1887

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 149  agagtcatcatgtccatgtgcatcaata 176
            |||| |||| ||||||||||||||||||
Sbjct: 1563 agagacatcttgtccatgtgcatcaata 1536
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>emb|CR718097.2|CNS0GH13 Tetraodon nigroviridis full-length cDNA
          Length = 878

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 346 tcttcatcttcatccaccct 365
           ||||||||||||||||||||
Sbjct: 558 tcttcatcttcatccaccct 539
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>emb|AL161631.20| Human DNA sequence from clone RP11-70K10 on chromosome 9 Contains a
             pseudogene similar to part of the transient receptor
             potential cation channel (TRP) family of proteins and the
             gene for a novel protein (FLJ20300), complete sequence
          Length = 119819

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 375   ataatgagcatttccatatc 394
             ||||||||||||||||||||
Sbjct: 16237 ataatgagcatttccatatc 16218
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>emb|AL121949.13|HSDJ407E4 Human DNA sequence from clone RP3-407E4 on chromosome 6q12-13, complete
             sequence
          Length = 140287

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 409   tgtatccaaaaaagaagaag 428
             ||||||||||||||||||||
Sbjct: 54274 tgtatccaaaaaagaagaag 54293
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>emb|AL049589.15|HSJ570L12 Human DNA sequence from clone RP4-570L12 on chromosome Xq13.1-21.1
             Contains the PGK1 gene for phosphoglycerate kinase 1, the
             TAF9L gene for TAF9-like RNA polymerase II TATA box
             binding protein (TBP)-associated factor 31kDa, a novel
             pseudogene and a CpG island, complete sequence
          Length = 143508

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 448   tcatgagaaactgcactggattca 471
             ||||| ||||||||||||||||||
Sbjct: 78945 tcatgggaaactgcactggattca 78968
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>emb|X52615.1|PFCELB Cellvibrio japonicus celB gene for endoglucanase B
          Length = 2144

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 342 tgcgtcttcatcttcatcca 361
           ||||||||||||||||||||
Sbjct: 714 tgcgtcttcatcttcatcca 733
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>emb|CR381673.7| Zebrafish DNA sequence from clone CH211-209J3 in linkage group 2,
              complete sequence
          Length = 209097

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 394    cagaaaccaattgtatgtat 413
              ||||||||||||||||||||
Sbjct: 168158 cagaaaccaattgtatgtat 168177
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>dbj|AK150301.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length
           enriched library, clone:I830002E15 product:hypothetical
           Proline-rich region profile containing protein, full
           insert sequence
          Length = 4092

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 336 ttgaaatgcgtcttcatcttcatc 359
           ||||||||| ||||||||||||||
Sbjct: 225 ttgaaatgcatcttcatcttcatc 202
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>dbj|AK154102.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN
           full-length enriched library, clone:F630002A05
           product:hypothetical Proline-rich region profile
           containing protein, full insert sequence
          Length = 4049

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 336 ttgaaatgcgtcttcatcttcatc 359
           ||||||||| ||||||||||||||
Sbjct: 222 ttgaaatgcatcttcatcttcatc 199
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>dbj|AK170918.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN
           full-length enriched library, clone:F630209K10
           product:hypothetical Proline-rich region profile
           containing protein, full insert sequence
          Length = 3829

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 336 ttgaaatgcgtcttcatcttcatc 359
           ||||||||| ||||||||||||||
Sbjct: 225 ttgaaatgcatcttcatcttcatc 202
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>dbj|AK170745.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN
           full-length enriched library, clone:F630118F14
           product:hypothetical Proline-rich region profile
           containing protein, full insert sequence
          Length = 4056

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 336 ttgaaatgcgtcttcatcttcatc 359
           ||||||||| ||||||||||||||
Sbjct: 189 ttgaaatgcatcttcatcttcatc 166
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>dbj|AK170408.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN
           full-length enriched library, clone:F630102L02
           product:hypothetical Proline-rich region profile
           containing protein, full insert sequence
          Length = 4055

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 336 ttgaaatgcgtcttcatcttcatc 359
           ||||||||| ||||||||||||||
Sbjct: 188 ttgaaatgcatcttcatcttcatc 165
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>dbj|AK087559.1| Mus musculus 0 day neonate eyeball cDNA, RIKEN full-length enriched
           library, clone:E130320P05 product:hypothetical protein,
           full insert sequence
          Length = 4056

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 336 ttgaaatgcgtcttcatcttcatc 359
           ||||||||| ||||||||||||||
Sbjct: 188 ttgaaatgcatcttcatcttcatc 165
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 537     ttttagttgcacaactaaat 556
               ||||||||||||||||||||
Sbjct: 1509703 ttttagttgcacaactaaat 1509684
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>ref|NM_172635.1| Mus musculus expressed sequence AV312086 (AV312086), mRNA
          Length = 4056

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 336 ttgaaatgcgtcttcatcttcatc 359
           ||||||||| ||||||||||||||
Sbjct: 188 ttgaaatgcatcttcatcttcatc 165
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>gb|BC093583.1| Xenopus laevis cDNA clone IMAGE:6866498, containing frame-shift
            errors
          Length = 1975

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 346  tcttcatcttcatccaccct 365
            ||||||||||||||||||||
Sbjct: 1484 tcttcatcttcatccaccct 1465
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>dbj|AP002860.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0409B08
          Length = 134673

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 537   ttttagttgcacaactaaat 556
             ||||||||||||||||||||
Sbjct: 75351 ttttagttgcacaactaaat 75332
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>dbj|AB084515.1| Candida parapsilosis cpr-c1 gene for conjugated polyketone
           reductase C1, complete cds
          Length = 1480

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 73  aaaacactcgaaacaccaaa 92
           ||||||||||||||||||||
Sbjct: 633 aaaacactcgaaacaccaaa 652
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>ref|XM_560068.1| Anopheles gambiae str. PEST ENSANGP00000028861
           (ENSANGG00000022831), partial mRNA
          Length = 432

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 188 tcatcaaagttaccatactg 207
           ||||||||||||||||||||
Sbjct: 107 tcatcaaagttaccatactg 126
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>gb|AC158772.5| Mus musculus chromosome 18, clone RP23-291M14, complete sequence
          Length = 198851

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 18    ttcaaatggtccagaacaca 37
             ||||||||||||||||||||
Sbjct: 78079 ttcaaatggtccagaacaca 78098
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>gb|AC115692.6| Mus musculus chromosome 18, clone RP23-463G11, complete sequence
          Length = 227631

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 18     ttcaaatggtccagaacaca 37
              ||||||||||||||||||||
Sbjct: 219090 ttcaaatggtccagaacaca 219071
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>dbj|AP000852.4| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-851M3, complete
              sequence
          Length = 166277

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 521    atgtataaaatcatcatttt 540
              ||||||||||||||||||||
Sbjct: 154060 atgtataaaatcatcatttt 154079
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>emb|CT025633.3| Pan troglodytes chromosome X clone RP43-007L03 map Xq28, complete
              sequence
          Length = 205943

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 448    tcatgagaaactgcactggattca 471
              ||||| ||||||||||||||||||
Sbjct: 152738 tcatgggaaactgcactggattca 152761


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,262,790
Number of Sequences: 3902068
Number of extensions: 6262790
Number of successful extensions: 126587
Number of sequences better than 10.0: 56
Number of HSP's better than 10.0 without gapping: 56
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 126302
Number of HSP's gapped (non-prelim): 285
length of query: 611
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 588
effective length of database: 17,143,297,704
effective search space: 10080259049952
effective search space used: 10080259049952
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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