ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd2g03
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1BFR2_USTMA (Q4P5V5) Protein BFR2 29 9.0

>BFR2_USTMA (Q4P5V5) Protein BFR2|
          Length = 581

 Score = 28.9 bits (63), Expect = 9.0
 Identities = 17/76 (22%), Positives = 38/76 (50%)
 Frame = -3

Query: 468 EDADEVEDGKKAAAAVEMGEAKVNKANDDSAVDVDEQAVDKVASQV*PALPRACDVCMRW 289
           EDAD+ ++  + A++ +  + +    ND+S  D D   V++ ++Q   +   A  +    
Sbjct: 146 EDADQDDEDMEVASSKKDKKLRFAADNDESDDDSDSSQVNQTSAQASTSNSIAAQIAQSA 205

Query: 288 *QASSIRSSRVVTLSK 241
            QA ++++ R+    K
Sbjct: 206 SQAKALKARRLEDAEK 221


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 45,495,377
Number of Sequences: 219361
Number of extensions: 679344
Number of successful extensions: 2201
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 2155
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2199
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 3970331829
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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