>SYV_WIGBR (Q8D294) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)|
           (ValRS)
          Length = 881

 Score = 29.3 bits (64), Expect = 3.0
 Identities = 12/20 (60%), Positives = 14/20 (70%)
 Frame = +1

Query: 55  PITYTINRNQYPGRLNSTVR 114
           PI Y +N+NQYPG   S VR
Sbjct: 436 PIWYDVNKNQYPGISESDVR 455

>FHAB_BORPE (P12255) Filamentous hemagglutinin|
          Length = 3590

 Score = 28.5 bits (62), Expect = 5.0
 Identities = 14/24 (58%), Positives = 16/24 (66%)
 Frame = +1

Query: 49   GKPITYTINRNQYPGRLNSTVRST 120
            GKP TYTINR +   +LN  V ST
Sbjct: 3537 GKPQTYTINRREDLMKLNGKVLST 3560

>IF35_HUMAN (O00303) Eukaryotic translation initiation factor 3 subunit 5|
           (eIF-3 epsilon) (eIF3 p47 subunit) (eIF3f)
          Length = 357

 Score = 28.1 bits (61), Expect = 6.6
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = -1

Query: 166 IPGSANAGAPAPTPSMCFXPWNLAAPGT 83
           +P +A A  PAPTP+    P   AAP +
Sbjct: 18  VPAAAPASVPAPTPAPAAAPVPAAAPAS 45

>TNFL8_MOUSE (P32972) Tumor necrosis factor ligand superfamily member 8 (CD30|
           ligand) (CD30-L) (CD153 antigen)
          Length = 239

 Score = 27.7 bits (60), Expect = 8.6
 Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 11/48 (22%)
 Frame = -1

Query: 157 SANAGAPAPTPSMCFXPWNLAAPGTD-----------FYLSCM*LACL 47
           + + GAP+P P+M   P ++A+P              FYLS   L CL
Sbjct: 8   AGSCGAPSPDPAMQVQPGSVASPWRSTRPWRSTSRSYFYLSTTALVCL 55


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 30,628,637
Number of Sequences: 219361
Number of extensions: 544946
Number of successful extensions: 1640
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1513
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1622
length of database: 80,573,946
effective HSP length: 42
effective length of database: 71,360,784
effective search space used: 1712658816
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)