ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd2g01
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC004682.1|HUAC004682 Homo sapiens Chromosome 16 BAC clone CI... 44 0.34
2emb|X00606.1|HSHP201 Human Hp2 gene fragment for haptoglobin alp... 44 0.34
3emb|CR293525.10| Zebrafish DNA sequence from clone CH211-142B9 i... 44 0.34
4gb|AC151756.2| Ornithorhynchus anatinus chromosome UNK clone OAB... 44 0.34
5gb|AC009087.4|AC009087 Homo sapiens chromosome 16 clone RP11-384... 44 0.34
6gb|DQ314870.1| Homo sapiens haptoglobin (HP) gene, complete cds 44 0.34
7gb|M10935.1|HUMHPARS1 Human haptoglobin gene (alpha-2 allele), c... 44 0.34
8gb|M69197.1|HUMHP2HPR Human haptoglobin and haptoglobin-related ... 44 0.34
9emb|AL731678.17| Mouse DNA sequence from clone RP23-39H12 on chr... 44 0.34
10gb|M84463.1|CHPHAPGC2 P.troglodytes haptoglobin (HPR) gene, 3' e... 44 0.34
11gb|M84462.1|CHPHAPGC1 Chimpanzee (P.troglodytes) haptoglobin (Hp... 44 0.34
12gb|M20762.1|CHPHPA03 Chimpanzee haptoglobin (Hpp) gene, exon 5 44 0.34
13gb|M20760.1|CHPHPA01 Chimpanzee haptoglobin (Hp) gene, exon 5 44 0.34
14gb|AY617138.1| Bostrychia radicans 18S ribosomal RNA gene, parti... 42 1.3
15emb|AJ868436.1| Sodalis glossinidius pSG2 plasmid from Glossina ... 42 1.3
16emb|AJ868439.1| Sodalis glossinidius pSG4 plasmid from Glossina ... 42 1.3
17emb|AJ868438.1| Sodalis glossinidius pSG4 plasmid from Glossina ... 42 1.3
18emb|AJ868435.1| Sodalis glossinidius pSG2 plasmid from Glossina ... 42 1.3
19gb|AC073095.4| Homo sapiens BAC clone RP11-384A20 from 7, comple... 42 1.3
20emb|BX119919.5| Human DNA sequence from clone RP11-987D21 on chr... 42 1.3
21emb|AL592504.6| Human DNA sequence from clone RP11-320J16 on chr... 42 1.3
22dbj|AP008235.1| Sodalis glossinidius str. 'morsitans' plasmid pS... 42 1.3
23dbj|AP008234.1| Sodalis glossinidius str. 'morsitans' plasmid pS... 42 1.3
24emb|BX664626.9| Zebrafish DNA sequence from clone CH211-266O3 in... 42 1.3
25emb|BX571757.8| Zebrafish DNA sequence from clone CH211-273J9 in... 42 1.3
26gb|AC007839.4|AC007839 Drosophila melanogaster, chromosome 2R, r... 42 1.3
27gb|AC006452.5| Homo sapiens PAC clone RP4-592P3 from 7, complete... 42 1.3
28gb|AE003797.3| Drosophila melanogaster chromosome 2R, section 53... 42 1.3
29emb|BX546491.3| Human DNA sequence from clone RP11-869E16 on chr... 42 1.3
30emb|CT476806.2| Pan troglodytes chromosome X BAC RP43-032D14, co... 42 1.3
31ref|NM_111083.2| Arabidopsis thaliana unknown protein AT3G02160 ... 40 5.3
32gb|BT020172.1| Arabidopsis thaliana At3g02160 mRNA, complete cds 40 5.3
33gb|BT015767.1| Arabidopsis thaliana At3g02160 mRNA, complete cds 40 5.3
34gb|BC097142.1| Danio rerio zgc:114081, mRNA (cDNA clone MGC:1140... 40 5.3
35ref|NM_001030193.1| Danio rerio zgc:114081 (zgc:114081), mRNA 40 5.3
36gb|AC145378.2| Pan troglodytes BAC clone RP43-56P12 from 7, comp... 40 5.3
37gb|AC011664.10|ATAC011664 Arabidopsis thaliana chromosome III BA... 40 5.3
38gb|AC009755.7|ATAC009755 Arabidopsis thaliana chromosome III BAC... 40 5.3
39gb|AC121586.3| Mus musculus BAC clone RP23-273A13 from 2, comple... 40 5.3
40gb|AC102582.9| Mus musculus chromosome 9, clone RP23-312A24, com... 40 5.3
41gb|AC145783.1| Pan troglodytes BAC clone RP43-27O9 from 7, compl... 40 5.3
42emb|AL445217.3| Human DNA sequence from clone RP11-335G18 on chr... 40 5.3
43gb|AY038863.1|AY038861S03 Mus musculus protein tyrosine phosphat... 40 5.3
44gb|AC163678.3| Mus musculus BAC clone RP24-104D14 from chromosom... 40 5.3
45emb|AL161555.2|ATCHRIV55 Arabidopsis thaliana DNA chromosome 4, ... 40 5.3
46emb|AL035527.1|ATF17L22 Arabidopsis thaliana DNA chromosome 4, B... 40 5.3
47emb|AL023533.1|SPBC1706 S.pombe chromosome II cosmid c1706 40 5.3
48emb|CR932968.2| Medicago truncatula chromosome 5 clone mth2-8e17... 40 5.3
49emb|AL662892.11| Mouse DNA sequence from clone RP23-408L15 on ch... 40 5.3
50gb|AC156557.8| Mus musculus chromosome 7, clone RP23-321F8, comp... 40 5.3
51gb|AC010051.9| Drosophila melanogaster 3L BAC RP98-3J2 (Roswell ... 40 5.3
52emb|BX950205.10| Zebrafish DNA sequence from clone CH211-226H8 i... 40 5.3
53gb|AC108172.1| Homo sapiens chromosome 5 clone RP11-171P23, comp... 40 5.3
54gb|AC034226.6| Homo sapiens chromosome 5 clone CTD-2130F23, comp... 40 5.3
55gb|AC074129.2|AC074129 Homo sapiens chromosome 5 clone CTD-2116N... 40 5.3
56emb|BX823224.1|CNS0A5B4 Arabidopsis thaliana Full-length cDNA Co... 40 5.3
57gb|AC023090.12| Homo sapiens chromosome 18, clone RP11-800A18, c... 40 5.3
58dbj|AB164458.1| Asphondylia sp. HedFlChb138 mitochondrial gene f... 40 5.3
59dbj|AB164457.1| Asphondylia sp. HedFlChb136 mitochondrial gene f... 40 5.3
60dbj|AB164456.1| Asphondylia sp. HedFlChb135 mitochondrial gene f... 40 5.3
61emb|BX276109.11| Mouse DNA sequence from clone RP23-209P8 on chr... 40 5.3
62emb|Z99762.1|FAZ99762 Flaveria anomala gdcsP gene 40 5.3
63emb|BX294670.6| Zebrafish DNA sequence from clone CH211-154O6 in... 40 5.3
64emb|BX465868.6| Zebrafish DNA sequence from clone DKEY-42I9 in l... 40 5.3
65emb|AL672171.8| Zebrafish DNA sequence from clone BUSM1-270G24 i... 40 5.3
66emb|AL132838.4|CNS01DTQ Human chromosome 14 DNA sequence BAC R-8... 40 5.3
67gb|AE003593.2| Drosophila melanogaster chromosome 3L, section 74... 40 5.3
68emb|AL122023.3|CNS01DSX Human chromosome 14 DNA sequence BAC R-1... 40 5.3
69emb|CT009706.20| Mouse DNA sequence from clone RP23-131H17 on ch... 40 5.3
70emb|AL935132.13| Mouse DNA sequence from clone RP23-8G23 on chro... 40 5.3
71emb|AL954378.10| Mouse DNA sequence from clone RP24-327K3 on chr... 40 5.3 
>gb|AC004682.1|HUAC004682 Homo sapiens Chromosome 16 BAC clone CIT987SK-A-259H10, complete sequence
          Length = 189134

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                            
Query: 289    gtaatgtaatcaatttaaaaaacaaaatta 318
              ||||||||| |||||||||||||| |||||
Sbjct: 186835 gtaatgtaaacaatttaaaaaacagaatta 186806
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>emb|X00606.1|HSHP201 Human Hp2 gene fragment for haptoglobin alpha- and beta-chain
          Length = 4865

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                          
Query: 289  gtaatgtaatcaatttaaaaaacaaaatta 318
            ||||||||| |||||||||||||| |||||
Sbjct: 3985 gtaatgtaaacaatttaaaaaacagaatta 4014
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>emb|CR293525.10| Zebrafish DNA sequence from clone CH211-142B9 in linkage group 12,
             complete sequence
          Length = 155553

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 291   aatgtaatcaatttaaaaaaca 312
             ||||||||||||||||||||||
Sbjct: 84351 aatgtaatcaatttaaaaaaca 84372
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>gb|AC151756.2| Ornithorhynchus anatinus chromosome UNK clone OABb-466P24, complete
              sequence
          Length = 156508

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 148    agcaagatgaaccattttcttt 169
              ||||||||||||||||||||||
Sbjct: 113808 agcaagatgaaccattttcttt 113829



 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 186    agcaagatgaaccattttctt 206
              |||||||||||||||||||||
Sbjct: 113808 agcaagatgaaccattttctt 113828
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>gb|AC009087.4|AC009087 Homo sapiens chromosome 16 clone RP11-384M15, complete sequence
          Length = 174933

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                           
Query: 289   gtaatgtaatcaatttaaaaaacaaaatta 318
             ||||||||| |||||||||||||| |||||
Sbjct: 57462 gtaatgtaaacaatttaaaaaacagaatta 57433
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>gb|DQ314870.1| Homo sapiens haptoglobin (HP) gene, complete cds
          Length = 10000

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                          
Query: 289  gtaatgtaatcaatttaaaaaacaaaatta 318
            ||||||||| |||||||||||||| |||||
Sbjct: 6860 gtaatgtaaacaatttaaaaaacagaatta 6889
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>gb|M10935.1|HUMHPARS1 Human haptoglobin gene (alpha-2 allele), complete cds and
            haptoglobin-related gene, exon 1 and three Alu repeats
          Length = 11551

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                          
Query: 289  gtaatgtaatcaatttaaaaaacaaaatta 318
            ||||||||| |||||||||||||| |||||
Sbjct: 6304 gtaatgtaaacaatttaaaaaacagaatta 6333
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>gb|M69197.1|HUMHP2HPR Human haptoglobin and haptoglobin-related protein (HP and HPR) genes,
            complete cds
          Length = 38542

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                          
Query: 289  gtaatgtaatcaatttaaaaaacaaaatta 318
            ||||||||| |||||||||||||| |||||
Sbjct: 6309 gtaatgtaaacaatttaaaaaacagaatta 6338
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>emb|AL731678.17| Mouse DNA sequence from clone RP23-39H12 on chromosome X, complete
              sequence
          Length = 230186

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 293    tgtaatcaatttaaaaaacaaaatta 318
              |||||||| |||||||||||||||||
Sbjct: 227055 tgtaatcattttaaaaaacaaaatta 227030
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>gb|M84463.1|CHPHAPGC2 P.troglodytes haptoglobin (HPR) gene, 3' end; haptoglobin (HPP) gene,
             complete cds
          Length = 23136

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                           
Query: 289   gtaatgtaatcaatttaaaaaacaaaatta 318
             ||||||||| |||||||||||||| |||||
Sbjct: 20648 gtaatgtaagcaatttaaaaaacagaatta 20677
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>gb|M84462.1|CHPHAPGC1 Chimpanzee (P.troglodytes) haptoglobin (Hp) gene, 3' end and HPR
            gene, 5' end
          Length = 5421

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                          
Query: 289  gtaatgtaatcaatttaaaaaacaaaatta 318
            ||||||||| |||||||||||||| |||||
Sbjct: 2263 gtaatgtaaacaatttaaaaaacagaatta 2292
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>gb|M20762.1|CHPHPA03 Chimpanzee haptoglobin (Hpp) gene, exon 5
          Length = 2616

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 289 gtaatgtaatcaatttaaaaaacaaaatta 318
           ||||||||| |||||||||||||| |||||
Sbjct: 636 gtaatgtaagcaatttaaaaaacagaatta 665
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>gb|M20760.1|CHPHPA01 Chimpanzee haptoglobin (Hp) gene, exon 5
          Length = 2319

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 289 gtaatgtaatcaatttaaaaaacaaaatta 318
           ||||||||| |||||||||||||| |||||
Sbjct: 325 gtaatgtaaacaatttaaaaaacagaatta 354
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>gb|AY617138.1| Bostrychia radicans 18S ribosomal RNA gene, partial sequence
          Length = 1777

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 297  atcaatttaaaaaacaaaatt 317
            |||||||||||||||||||||
Sbjct: 1360 atcaatttaaaaaacaaaatt 1340
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>emb|AJ868436.1| Sodalis glossinidius pSG2 plasmid from Glossina austini
          Length = 27240

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 35    tacaacacttggaaaggatag 55
             |||||||||||||||||||||
Sbjct: 17859 tacaacacttggaaaggatag 17839
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>emb|AJ868439.1| Sodalis glossinidius pSG4 plasmid from Glossina austini
          Length = 10816

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 35   tacaacacttggaaaggatag 55
            |||||||||||||||||||||
Sbjct: 1088 tacaacacttggaaaggatag 1068
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>emb|AJ868438.1| Sodalis glossinidius pSG4 plasmid from Glossina palpalis palpalis
          Length = 10816

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 35   tacaacacttggaaaggatag 55
            |||||||||||||||||||||
Sbjct: 1088 tacaacacttggaaaggatag 1068
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>emb|AJ868435.1| Sodalis glossinidius pSG2 plasmid from Glossina palpalis palpalis
          Length = 27240

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 35    tacaacacttggaaaggatag 55
             |||||||||||||||||||||
Sbjct: 17859 tacaacacttggaaaggatag 17839
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>gb|AC073095.4| Homo sapiens BAC clone RP11-384A20 from 7, complete sequence
          Length = 70276

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 254   taaaaatgagatgcaactaaa 274
             |||||||||||||||||||||
Sbjct: 59083 taaaaatgagatgcaactaaa 59063
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>emb|BX119919.5| Human DNA sequence from clone RP11-987D21 on chromosome X, complete
            sequence
          Length = 55442

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 300  aatttaaaaaacaaaattagc 320
            |||||||||||||||||||||
Sbjct: 5982 aatttaaaaaacaaaattagc 5962
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>emb|AL592504.6| Human DNA sequence from clone RP11-320J16 on chromosome X Contains part
              of a novel gene, complete sequence
          Length = 173828

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 244    aaatgtaatgtaaaaatgagatgca 268
              ||||||||| |||||||||||||||
Sbjct: 120769 aaatgtaatttaaaaatgagatgca 120793
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>dbj|AP008235.1| Sodalis glossinidius str. 'morsitans' plasmid pSG3, complete sequence
          Length = 10810

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 35    tacaacacttggaaaggatag 55
             |||||||||||||||||||||
Sbjct: 10701 tacaacacttggaaaggatag 10681
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>dbj|AP008234.1| Sodalis glossinidius str. 'morsitans' plasmid pSG2, complete sequence
          Length = 27240

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 35    tacaacacttggaaaggatag 55
             |||||||||||||||||||||
Sbjct: 27048 tacaacacttggaaaggatag 27068
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>emb|BX664626.9| Zebrafish DNA sequence from clone CH211-266O3 in linkage group 20,
             complete sequence
          Length = 200968

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 299   caatttaaaaaacaaaattag 319
             |||||||||||||||||||||
Sbjct: 28889 caatttaaaaaacaaaattag 28909
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>emb|BX571757.8| Zebrafish DNA sequence from clone CH211-273J9 in linkage group 16,
              complete sequence
          Length = 167101

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 292    atgtaatcaatttaaaaaaca 312
              |||||||||||||||||||||
Sbjct: 113444 atgtaatcaatttaaaaaaca 113464
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>gb|AC007839.4|AC007839 Drosophila melanogaster, chromosome 2R, region 56B1-56C4, BAC clone
             BACR01N09, complete sequence
          Length = 161172

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 324   tgtgtgcgcccatcaaaagca 344
             |||||||||||||||||||||
Sbjct: 22068 tgtgtgcgcccatcaaaagca 22088
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>gb|AC006452.5| Homo sapiens PAC clone RP4-592P3 from 7, complete sequence
          Length = 121705

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 27    tagcagattacaacacttgga 47
             |||||||||||||||||||||
Sbjct: 76562 tagcagattacaacacttgga 76542
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>gb|AE003797.3| Drosophila melanogaster chromosome 2R, section 53 of 73 of the complete
              sequence
          Length = 306854

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 324    tgtgtgcgcccatcaaaagca 344
              |||||||||||||||||||||
Sbjct: 204904 tgtgtgcgcccatcaaaagca 204924
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>emb|BX546491.3| Human DNA sequence from clone RP11-869E16 on chromosome X, complete
            sequence
          Length = 18014

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 300  aatttaaaaaacaaaattagc 320
            |||||||||||||||||||||
Sbjct: 2398 aatttaaaaaacaaaattagc 2378
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>emb|CT476806.2| Pan troglodytes chromosome X BAC RP43-032D14, complete sequence
          Length = 145919

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 244   aaatgtaatgtaaaaatgagatgca 268
             ||||||||| |||||||||||||||
Sbjct: 63008 aaatgtaatttaaaaatgagatgca 62984
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>ref|NM_111083.2| Arabidopsis thaliana unknown protein AT3G02160 mRNA, complete cds
          Length = 1700

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 151  aagatgaaccattttcttta 170
            ||||||||||||||||||||
Sbjct: 1018 aagatgaaccattttcttta 999
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>gb|BT020172.1| Arabidopsis thaliana At3g02160 mRNA, complete cds
          Length = 1194

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 151 aagatgaaccattttcttta 170
           ||||||||||||||||||||
Sbjct: 688 aagatgaaccattttcttta 669
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>gb|BT015767.1| Arabidopsis thaliana At3g02160 mRNA, complete cds
          Length = 1673

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 151  aagatgaaccattttcttta 170
            ||||||||||||||||||||
Sbjct: 1000 aagatgaaccattttcttta 981
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>gb|BC097142.1| Danio rerio zgc:114081, mRNA (cDNA clone MGC:114081 IMAGE:7439331),
            complete cds
          Length = 1524

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 292  atgtaatcaatttaaaaaacaaaa 315
            ||||||||||||||||||| ||||
Sbjct: 1497 atgtaatcaatttaaaaaaaaaaa 1520
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>ref|NM_001030193.1| Danio rerio zgc:114081 (zgc:114081), mRNA
          Length = 1524

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 292  atgtaatcaatttaaaaaacaaaa 315
            ||||||||||||||||||| ||||
Sbjct: 1497 atgtaatcaatttaaaaaaaaaaa 1520
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>gb|AC145378.2| Pan troglodytes BAC clone RP43-56P12 from 7, complete sequence
          Length = 186835

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 297   atcaatttaaaaaacaaaat 316
             ||||||||||||||||||||
Sbjct: 66395 atcaatttaaaaaacaaaat 66414
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>gb|AC011664.10|ATAC011664 Arabidopsis thaliana chromosome III BAC F1C9 genomic sequence, complete
             sequence
          Length = 103960

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 151   aagatgaaccattttcttta 170
             ||||||||||||||||||||
Sbjct: 14035 aagatgaaccattttcttta 14054
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>gb|AC009755.7|ATAC009755 Arabidopsis thaliana chromosome III BAC F14P3 genomic sequence,
             complete sequence
          Length = 94369

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 151   aagatgaaccattttcttta 170
             ||||||||||||||||||||
Sbjct: 79579 aagatgaaccattttcttta 79598
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>gb|AC121586.3| Mus musculus BAC clone RP23-273A13 from 2, complete sequence
          Length = 154614

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 239   ctactaaatgtaatgtaaaa 258
             ||||||||||||||||||||
Sbjct: 67203 ctactaaatgtaatgtaaaa 67222
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>gb|AC102582.9| Mus musculus chromosome 9, clone RP23-312A24, complete sequence
          Length = 190790

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 297    atcaatttaaaaaacaaaattagc 320
              |||||||| |||||||||||||||
Sbjct: 179262 atcaatttgaaaaacaaaattagc 179239
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>gb|AC145783.1| Pan troglodytes BAC clone RP43-27O9 from 7, complete sequence
          Length = 175651

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 297   atcaatttaaaaaacaaaat 316
             ||||||||||||||||||||
Sbjct: 35239 atcaatttaaaaaacaaaat 35258
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>emb|AL445217.3| Human DNA sequence from clone RP11-335G18 on chromosome 13 Contains the
              5' end of the EPSTI1 gene for epithelial stromal
              interaction 1 (breast) and the gene for a DNAJ
              domain-containing protein (MCJ), complete sequence
          Length = 161699

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 296    aatcaatttaaaaaacaaaa 315
              ||||||||||||||||||||
Sbjct: 130396 aatcaatttaaaaaacaaaa 130377
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>gb|AY038863.1|AY038861S03 Mus musculus protein tyrosine phosphatase receptor-like protein J
            (Ptprj) gene, intron 1
          Length = 8929

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 291  aatgtaatcaatttaaaaaacaaa 314
            |||||||||||||||| |||||||
Sbjct: 3772 aatgtaatcaatttaagaaacaaa 3749
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>gb|AC163678.3| Mus musculus BAC clone RP24-104D14 from chromosome 10, complete sequence
          Length = 196603

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 54     agagatttctatttataaat 73
              ||||||||||||||||||||
Sbjct: 149824 agagatttctatttataaat 149805
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>emb|AL161555.2|ATCHRIV55 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 55
          Length = 194916

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 297    atcaatttaaaaaacaaaat 316
              ||||||||||||||||||||
Sbjct: 172931 atcaatttaaaaaacaaaat 172912
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>emb|AL035527.1|ATF17L22 Arabidopsis thaliana DNA chromosome 4, BAC clone F17L22 (ESSAII
             project)
          Length = 107702

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 297   atcaatttaaaaaacaaaat 316
             ||||||||||||||||||||
Sbjct: 86873 atcaatttaaaaaacaaaat 86854
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>emb|AL023533.1|SPBC1706 S.pombe chromosome II cosmid c1706
          Length = 9000

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 303  ttaaaaaacaaaattagcac 322
            ||||||||||||||||||||
Sbjct: 3855 ttaaaaaacaaaattagcac 3874
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>emb|CR932968.2| Medicago truncatula chromosome 5 clone mth2-8e17, COMPLETE SEQUENCE
          Length = 128179

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                              
Query: 293    tgtaatcaatttaaaaaacaaaattagcacat 324
              |||||| ||||||||||| |||||||| ||||
Sbjct: 103346 tgtaattaatttaaaaaaaaaaattagaacat 103377
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>emb|AL662892.11| Mouse DNA sequence from clone RP23-408L15 on chromosome 11 Contains
             part of a novel gene, a novel gene, a SMT3 (supressor of
             mif two, 3) homolog 1 (S. cerevisiae) (Smt3h1) pseudogene
             and a ribosomal protein S12 (Rps12) pseudogene, complete
             sequence
          Length = 106145

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 296   aatcaatttaaaaaacaaaa 315
             ||||||||||||||||||||
Sbjct: 64975 aatcaatttaaaaaacaaaa 64994
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>gb|AC156557.8| Mus musculus chromosome 7, clone RP23-321F8, complete sequence
          Length = 209053

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 292   atgtaatcaatttaaaaaacaaaa 315
             ||||||| ||||||||||||||||
Sbjct: 70526 atgtaataaatttaaaaaacaaaa 70503
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>gb|AC010051.9| Drosophila melanogaster 3L BAC RP98-3J2 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 184424

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 242   ctaaatgtaatgtaaaaatg 261
             ||||||||||||||||||||
Sbjct: 63994 ctaaatgtaatgtaaaaatg 63975
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>emb|BX950205.10| Zebrafish DNA sequence from clone CH211-226H8 in linkage group 22,
             complete sequence
          Length = 198379

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 296   aatcaatttaaaaaacaaaa 315
             ||||||||||||||||||||
Sbjct: 74362 aatcaatttaaaaaacaaaa 74343
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>gb|AC108172.1| Homo sapiens chromosome 5 clone RP11-171P23, complete sequence
          Length = 190619

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 302  tttaaaaaacaaaattagca 321
            ||||||||||||||||||||
Sbjct: 9922 tttaaaaaacaaaattagca 9941
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>gb|AC034226.6| Homo sapiens chromosome 5 clone CTD-2130F23, complete sequence
          Length = 148046

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 302   tttaaaaaacaaaattagca 321
             ||||||||||||||||||||
Sbjct: 59276 tttaaaaaacaaaattagca 59295
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>gb|AC074129.2|AC074129 Homo sapiens chromosome 5 clone CTD-2116N24, complete sequence
          Length = 108195

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 302    tttaaaaaacaaaattagca 321
              ||||||||||||||||||||
Sbjct: 103293 tttaaaaaacaaaattagca 103312
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>emb|BX823224.1|CNS0A5B4 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTLS12ZG05 of Adult vegetative tissue of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1702

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 151  aagatgaaccattttcttta 170
            ||||||||||||||||||||
Sbjct: 1018 aagatgaaccattttcttta 999
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>gb|AC023090.12| Homo sapiens chromosome 18, clone RP11-800A18, complete sequence
          Length = 180016

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 62    ctatttataaatagatagga 81
             ||||||||||||||||||||
Sbjct: 85260 ctatttataaatagatagga 85279
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>dbj|AB164458.1| Asphondylia sp. HedFlChb138 mitochondrial gene for 12S ribosomal
           RNA, partial sequence, isolate: HedFlChb138
          Length = 388

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 297 atcaatttaaaaaacaaaat 316
           ||||||||||||||||||||
Sbjct: 286 atcaatttaaaaaacaaaat 305
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>dbj|AB164457.1| Asphondylia sp. HedFlChb136 mitochondrial gene for 12S ribosomal
           RNA, partial sequence, isolate: HedFlChb136
          Length = 389

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 297 atcaatttaaaaaacaaaat 316
           ||||||||||||||||||||
Sbjct: 287 atcaatttaaaaaacaaaat 306
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>dbj|AB164456.1| Asphondylia sp. HedFlChb135 mitochondrial gene for 12S ribosomal
           RNA, partial sequence, isolate: HedFlChb135
          Length = 388

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 297 atcaatttaaaaaacaaaat 316
           ||||||||||||||||||||
Sbjct: 286 atcaatttaaaaaacaaaat 305
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>emb|BX276109.11| Mouse DNA sequence from clone RP23-209P8 on chromosome 2, complete
             sequence
          Length = 69864

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 239   ctactaaatgtaatgtaaaa 258
             ||||||||||||||||||||
Sbjct: 29532 ctactaaatgtaatgtaaaa 29513
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>emb|Z99762.1|FAZ99762 Flaveria anomala gdcsP gene
          Length = 8003

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 292  atgtaatcaatttaaaaaacaaaa 315
            ||||||||| ||||||||||||||
Sbjct: 3307 atgtaatcactttaaaaaacaaaa 3330
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>emb|BX294670.6| Zebrafish DNA sequence from clone CH211-154O6 in linkage group 16,
             complete sequence
          Length = 199070

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 243   taaatgtaatgtaaaaatga 262
             ||||||||||||||||||||
Sbjct: 51802 taaatgtaatgtaaaaatga 51783
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>emb|BX465868.6| Zebrafish DNA sequence from clone DKEY-42I9 in linkage group 22, complete
              sequence
          Length = 222195

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 300    aatttaaaaaacaaaattag 319
              ||||||||||||||||||||
Sbjct: 147886 aatttaaaaaacaaaattag 147867
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>emb|AL672171.8| Zebrafish DNA sequence from clone BUSM1-270G24 in linkage group 3
             Contains a CpG island, complete sequence
          Length = 114103

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 287   aagtaatgtaatcaatttaaaaaa 310
             |||||||||||||||| |||||||
Sbjct: 88209 aagtaatgtaatcaatataaaaaa 88232
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>emb|AL132838.4|CNS01DTQ Human chromosome 14 DNA sequence BAC R-85G20 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 175326

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 299    caatttaaaaaacaaaatta 318
              ||||||||||||||||||||
Sbjct: 117337 caatttaaaaaacaaaatta 117356
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>gb|AE003593.2| Drosophila melanogaster chromosome 3L, section 74 of 83 of the complete
             sequence
          Length = 313157

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 242   ctaaatgtaatgtaaaaatg 261
             ||||||||||||||||||||
Sbjct: 84687 ctaaatgtaatgtaaaaatg 84706
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>emb|AL122023.3|CNS01DSX Human chromosome 14 DNA sequence BAC R-120E11 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 171375

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 299   caatttaaaaaacaaaatta 318
             ||||||||||||||||||||
Sbjct: 58548 caatttaaaaaacaaaatta 58567
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>emb|CT009706.20| Mouse DNA sequence from clone RP23-131H17 on chromosome 9, complete
             sequence
          Length = 215322

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 297   atcaatttaaaaaacaaaattagc 320
             |||||||| |||||||||||||||
Sbjct: 11906 atcaatttgaaaaacaaaattagc 11883
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>emb|AL935132.13| Mouse DNA sequence from clone RP23-8G23 on chromosome 2, complete
           sequence
          Length = 165444

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 291 aatgtaatcaatttaaaaaacaaa 314
           |||||||||||||||| |||||||
Sbjct: 82  aatgtaatcaatttaagaaacaaa 105
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>emb|AL954378.10| Mouse DNA sequence from clone RP24-327K3 on chromosome 2, complete
            sequence
          Length = 3994

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 291  aatgtaatcaatttaaaaaacaaa 314
            |||||||||||||||| |||||||
Sbjct: 2076 aatgtaatcaatttaagaaacaaa 2099


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,634,769
Number of Sequences: 3902068
Number of extensions: 6634769
Number of successful extensions: 163516
Number of sequences better than 10.0: 71
Number of HSP's better than 10.0 without gapping: 71
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 163353
Number of HSP's gapped (non-prelim): 163
length of query: 395
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 373
effective length of database: 17,147,199,772
effective search space: 6395905514956
effective search space used: 6395905514956
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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