ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd2f24 |
|---|---|
| Clone Library Name | barley_pub |
>MA121_DROME (P53624) Mannosyl-oligosaccharide alpha-1,2-mannosidase isoform 1| (EC 3.2.1.113) (Man(9)-alpha-mannosidase) Length = 667 Score = 89.0 bits (219), Expect = 1e-17 Identities = 49/74 (66%), Positives = 52/74 (70%), Gaps = 2/74 (2%) Frame = -1 Query: 620 AFEKNSRIASGYVGLRXVNSGE--KDDKMQSFFLAETLKYLYLLFSPPSVVSFDEWVFNT 447 A EK+ R A GY GLR V E KDD QSFFLAETLKYLYLLFS SV+ DEWVFNT Sbjct: 581 ALEKHCRTAHGYCGLRNVYQQEPQKDDVQQSFFLAETLKYLYLLFSDDSVLPLDEWVFNT 640 Query: 446 EAHPLRIVPTHGSN 405 EAHPL P G+N Sbjct: 641 EAHPL---PIKGAN 651
>MA122_DROME (P53625) Mannosyl-oligosaccharide alpha-1,2-mannosidase isoform 2| (EC 3.2.1.113) (Man(9)-alpha-mannosidase) Length = 643 Score = 89.0 bits (219), Expect = 1e-17 Identities = 49/74 (66%), Positives = 52/74 (70%), Gaps = 2/74 (2%) Frame = -1 Query: 620 AFEKNSRIASGYVGLRXVNSGE--KDDKMQSFFLAETLKYLYLLFSPPSVVSFDEWVFNT 447 A EK+ R A GY GLR V E KDD QSFFLAETLKYLYLLFS SV+ DEWVFNT Sbjct: 557 ALEKHCRTAHGYCGLRNVYQQEPQKDDVQQSFFLAETLKYLYLLFSDDSVLPLDEWVFNT 616 Query: 446 EAHPLRIVPTHGSN 405 EAHPL P G+N Sbjct: 617 EAHPL---PIKGAN 627
>MA1C1_HUMAN (Q9NR34) Mannosyl-oligosaccharide 1,2-alpha-mannosidase IC (EC| 3.2.1.113) (Processing alpha-1,2-mannosidase IC) (Alpha-1,2-mannosidase IC) (Mannosidase alpha class 1C member 1) (HMIC) Length = 630 Score = 80.1 bits (196), Expect = 6e-15 Identities = 42/80 (52%), Positives = 54/80 (67%), Gaps = 2/80 (2%) Frame = -1 Query: 659 DPINNERREKVKXAFEKNSRIASGYVGLRXVNSG--EKDDKMQSFFLAETLKYLYLLFSP 486 +PI E +V A EK R +G+ G++ V S D+K QSFFLAETLKYLYLLFS Sbjct: 538 NPIYREWGWEVVLALEKYCRTEAGFSGIQDVYSSTPNHDNKQQSFFLAETLKYLYLLFSE 597 Query: 485 PSVVSFDEWVFNTEAHPLRI 426 ++S ++WVFNTEAHPL + Sbjct: 598 DDLLSLEDWVFNTEAHPLPV 617
>MA1A1_PIG (O02773) Mannosyl-oligosaccharide 1,2-alpha-mannosidase IA (EC| 3.2.1.113) (Processing alpha-1,2-mannosidase IA) (Alpha-1,2-mannosidase IA) (Mannosidase alpha class 1A member 1) (Man(9)-alpha-mannosidase) (Man9-mannosidase) Length = 659 Score = 76.6 bits (187), Expect = 7e-14 Identities = 37/68 (54%), Positives = 48/68 (70%), Gaps = 2/68 (2%) Frame = -1 Query: 620 AFEKNSRIASGYVGLRXV--NSGEKDDKMQSFFLAETLKYLYLLFSPPSVVSFDEWVFNT 447 A EK+ R+ GY GLR V ++ DD QSFFLAETLKYLYL+FS ++ + W+FNT Sbjct: 580 ALEKHCRVNGGYSGLRDVYVSAQTYDDVQQSFFLAETLKYLYLIFSDDDLLPLEHWIFNT 639 Query: 446 EAHPLRIV 423 EAHPL ++ Sbjct: 640 EAHPLPVL 647
>MA1A2_MOUSE (P39098) Mannosyl-oligosaccharide 1,2-alpha-mannosidase IB (EC| 3.2.1.113) (Processing alpha-1,2-mannosidase IB) (Alpha-1,2-mannosidase IB) (Mannosidase alpha class 1A member 2) Length = 641 Score = 75.9 bits (185), Expect = 1e-13 Identities = 39/81 (48%), Positives = 52/81 (64%), Gaps = 2/81 (2%) Frame = -1 Query: 659 DPINNERREKVKXAFEKNSRIASGYVGLRXVNSGEK--DDKMQSFFLAETLKYLYLLFSP 486 DP + + A EK+ R++ G+ G++ V + DD QSFFLAETLKYLYLLFS Sbjct: 547 DPRYRQWGWEAALAIEKSCRVSGGFSGVKDVYAPTPVHDDVQQSFFLAETLKYLYLLFSG 606 Query: 485 PSVVSFDEWVFNTEAHPLRIV 423 ++ D WVFNTEAHPL ++ Sbjct: 607 DDLLPLDHWVFNTEAHPLPVL 627
>MA1A2_HUMAN (O60476) Mannosyl-oligosaccharide 1,2-alpha-mannosidase IB (EC| 3.2.1.113) (Processing alpha-1,2-mannosidase IB) (Alpha-1,2-mannosidase IB) (Mannosidase alpha class 1A member 2) Length = 641 Score = 75.5 bits (184), Expect = 1e-13 Identities = 40/81 (49%), Positives = 50/81 (61%), Gaps = 2/81 (2%) Frame = -1 Query: 659 DPINNERREKVKXAFEKNSRIASGYVGLRXVNSGEK--DDKMQSFFLAETLKYLYLLFSP 486 DP + + A EK R+ G+ G++ V S DD QSFFLAETLKYLYLLFS Sbjct: 547 DPRYRQWGWEAALAIEKYCRVNGGFSGVKDVYSSTPTHDDVQQSFFLAETLKYLYLLFSG 606 Query: 485 PSVVSFDEWVFNTEAHPLRIV 423 ++ D WVFNTEAHPL ++ Sbjct: 607 DDLLPLDHWVFNTEAHPLPVL 627
>MA1A1_MOUSE (P45700) Mannosyl-oligosaccharide 1,2-alpha-mannosidase IA (EC| 3.2.1.113) (Processing alpha-1,2-mannosidase IA) (Alpha-1,2-mannosidase IA) (Mannosidase alpha class 1A member 1) (Man(9)-alpha-mannosidase) (Man9-mannosidase) Length = 655 Score = 73.6 bits (179), Expect = 6e-13 Identities = 36/68 (52%), Positives = 45/68 (66%), Gaps = 2/68 (2%) Frame = -1 Query: 620 AFEKNSRIASGYVGLRXVNSGEK--DDKMQSFFLAETLKYLYLLFSPPSVVSFDEWVFNT 447 A E + R+ GY GLR V + DD QSFFLAETLKYLYL+FS ++ + W+FNT Sbjct: 576 ALESHCRVNGGYSGLRDVYIARESYDDVQQSFFLAETLKYLYLIFSDDDLLPLEHWIFNT 635 Query: 446 EAHPLRIV 423 EAHP I+ Sbjct: 636 EAHPFPIL 643
>MA1A1_RABIT (P45701) Mannosyl-oligosaccharide 1,2-alpha-mannosidase IA (EC| 3.2.1.113) (Processing alpha-1,2-mannosidase IA) (Alpha-1,2-mannosidase IA) (Mannosidase alpha class 1A member 1) (Man(9)-alpha-mannosidase) (Fragment) Length = 469 Score = 73.6 bits (179), Expect = 6e-13 Identities = 39/70 (55%), Positives = 49/70 (70%), Gaps = 2/70 (2%) Frame = -1 Query: 620 AFEKNSRIASGYVGLRXVN-SGEK-DDKMQSFFLAETLKYLYLLFSPPSVVSFDEWVFNT 447 A E + R+ GY GLR V + EK D+ QSFFLAETLKYLYL+FS ++ + W+FNT Sbjct: 390 ALESHCRVNGGYSGLRDVYFTHEKYDNVQQSFFLAETLKYLYLIFSDDDLLPLEHWIFNT 449 Query: 446 EAHPLRIVPT 417 EAH L I+PT Sbjct: 450 EAHLLPILPT 459
>MA1A1_HUMAN (P33908) Mannosyl-oligosaccharide 1,2-alpha-mannosidase IA (EC| 3.2.1.113) (Processing alpha-1,2-mannosidase IA) (Alpha-1,2-mannosidase IA) (Mannosidase alpha class 1A member 1) (Man(9)-alpha-mannosidase) (Man9-mannosidase) Length = 653 Score = 70.9 bits (172), Expect = 4e-12 Identities = 36/69 (52%), Positives = 46/69 (66%), Gaps = 2/69 (2%) Frame = -1 Query: 620 AFEKNSRIASGYVGLRXVNSGEK--DDKMQSFFLAETLKYLYLLFSPPSVVSFDEWVFNT 447 A E + R+ GY GLR V + DD QSFFLAETLKYLYL+FS ++ + W+FN+ Sbjct: 574 ALENHCRVNGGYSGLRDVYLLHESYDDVQQSFFLAETLKYLYLIFSDDDLLPLEHWIFNS 633 Query: 446 EAHPLRIVP 420 EAH L I+P Sbjct: 634 EAHLLPILP 642
>MA1B1_HUMAN (Q9UKM7) Endoplasmic reticulum mannosyl-oligosaccharide| 1,2-alpha-mannosidase (EC 3.2.1.113) (ER alpha-1,2-mannosidase) (Mannosidase alpha class 1B member 1) (Man9GlcNAc2-specific-processing alpha-mannosidase) Length = 699 Score = 66.6 bits (161), Expect = 7e-11 Identities = 37/74 (50%), Positives = 51/74 (68%), Gaps = 5/74 (6%) Frame = -1 Query: 632 KVKXAFEKNSRIASG-YVGLRXVNSGEKD---DKMQSFFLAETLKYLYLLFS-PPSVVSF 468 ++ +F + +R+ SG Y + V +K DKM+SFFL ETLKYL+LLFS P+++S Sbjct: 622 EILQSFSRFTRVPSGGYSSINNVQDPQKPEPRDKMESFFLGETLKYLFLLFSDDPNLLSL 681 Query: 467 DEWVFNTEAHPLRI 426 D +VFNTEAHPL I Sbjct: 682 DAYVFNTEAHPLPI 695
>EDEM3_HUMAN (Q9BZQ6) ER degradation-enhancing alpha-mannosidase-like 3| Length = 889 Score = 61.2 bits (147), Expect = 3e-09 Identities = 34/88 (38%), Positives = 51/88 (57%), Gaps = 4/88 (4%) Frame = -1 Query: 659 DPINNERREKVKXAFEKNSRIASGYVGLRXVNSGEKDDKMQSFFLAETLKYLYLLFSPPS 480 DP E + + K +R+ G+ ++ V +G +D+M SFFLAE KYLYLLF+ Sbjct: 376 DPYYLEVGKTLIENLNKYARVPCGFAAMKDVRTGSHEDRMDSFFLAEMFKYLYLLFADKE 435 Query: 479 VVSFD--EWVFNTEAH--PLRIVPTHGS 408 + FD +++F TEAH PL + T+ S Sbjct: 436 DIIFDIEDYIFTTEAHLLPLWLSTTNQS 463
>EDEM2_HUMAN (Q9BV94) ER degradation-enhancing alpha-mannosidase-like 2| precursor Length = 578 Score = 59.7 bits (143), Expect = 8e-09 Identities = 34/101 (33%), Positives = 52/101 (51%), Gaps = 19/101 (18%) Frame = -1 Query: 659 DPINNERREKVKXAFEKNSRIASGYVGLRXVNSGEKDDKMQSFFLAETLKYLYLLFSPPS 480 DP E + EK S++ G+ ++ + + D++M+SFFLAET+KYLYLLF P + Sbjct: 386 DPTLLELGRDAVESIEKISKVECGFATIKDLRDHKLDNRMESFFLAETVKYLYLLFDPTN 445 Query: 479 VV-----SFDE--------------WVFNTEAHPLRIVPTH 414 + +FD ++FNTEAHP+ H Sbjct: 446 FIHNNGSTFDAVITPYGECILGAGGYIFNTEAHPIDPAALH 486
>EDEM1_MOUSE (Q925U4) ER degradation-enhancing alpha-mannosidase-like 1| Length = 652 Score = 55.1 bits (131), Expect = 2e-07 Identities = 28/67 (41%), Positives = 41/67 (61%), Gaps = 2/67 (2%) Frame = -1 Query: 620 AFEKNSRIASGYVGLRXVNSGEKDDKMQSFFLAETLKYLYLLFSPPSVV--SFDEWVFNT 447 + EK +++ GY L V K+D+M+SFFL+ET KYLYLLF + V S ++F T Sbjct: 515 SLEKYTKVKCGYATLHHVIDKSKEDRMESFFLSETCKYLYLLFDEENPVHKSGTRYMFTT 574 Query: 446 EAHPLRI 426 E H + + Sbjct: 575 EGHIISV 581
>YH04_YEAST (P38888) Protein YHR204W| Length = 796 Score = 55.1 bits (131), Expect = 2e-07 Identities = 29/68 (42%), Positives = 44/68 (64%), Gaps = 2/68 (2%) Frame = -1 Query: 629 VKXAFEKNSRIASGYVGLRXVNSGEKDDKMQSFFLAETLKYLYLLFSPPSVV--SFDEWV 456 +K F+ N G+ G + V +GE D+M++F L+ETLKYLYLLF + + S + + Sbjct: 437 LKQRFKSNC----GFAGFQNVITGELQDRMETFVLSETLKYLYLLFDEENELHNSASDVI 492 Query: 455 FNTEAHPL 432 F+TEAHP+ Sbjct: 493 FSTEAHPM 500
>EDEM1_HUMAN (Q92611) ER degradation-enhancing alpha-mannosidase-like 1| Length = 657 Score = 52.4 bits (124), Expect = 1e-06 Identities = 27/63 (42%), Positives = 38/63 (60%), Gaps = 2/63 (3%) Frame = -1 Query: 620 AFEKNSRIASGYVGLRXVNSGEKDDKMQSFFLAETLKYLYLLFSPPSVV--SFDEWVFNT 447 + EK +++ GY L V +D+M+SFFL+ET KYLYLLF + V S ++F T Sbjct: 520 SLEKYTKVKCGYATLHHVIDKSTEDRMESFFLSETCKYLYLLFDEDNPVHKSGTRYMFTT 579 Query: 446 EAH 438 E H Sbjct: 580 EGH 582
>MNS1_CANAL (Q8J0Q0) Mannosyl-oligosaccharide 1,2-alpha-mannosidase (EC| 3.2.1.113) (Man(9)-alpha-mannosidase) Length = 565 Score = 50.1 bits (118), Expect = 7e-06 Identities = 22/38 (57%), Positives = 28/38 (73%) Frame = -1 Query: 548 DKMQSFFLAETLKYLYLLFSPPSVVSFDEWVFNTEAHP 435 D +SF+ AETLKYLYLLF + + ++VFNTEAHP Sbjct: 468 DNTESFWWAETLKYLYLLFDDTNKIPLTDYVFNTEAHP 505
>MNS1_YEAST (P32906) Endoplasmic reticulum mannosyl-oligosaccharide| 1,2-alpha-mannosidase (EC 3.2.1.113) (ER alpha-1,2-mannosidase) (Man(9)-alpha-mannosidase) Length = 549 Score = 49.3 bits (116), Expect = 1e-05 Identities = 28/59 (47%), Positives = 38/59 (64%), Gaps = 2/59 (3%) Frame = -1 Query: 557 EKDDKMQSFFLAETLKYLYLLFSPPSVVSFD--EWVFNTEAHPLRIVPTHGSNGQSIET 387 +K + M+SF+LAETLKYLY+LF + FD + VFNTEAHP ++ QS+ T Sbjct: 491 KKSNNMESFWLAETLKYLYILF----LDEFDLTKVVFNTEAHPFPVLDEEILKSQSLTT 545
>YKU1_SCHPO (Q9P7C3) Putative mannosyl-oligosaccharide 1,2-alpha-mannosidase| (EC 3.2.1.113) (Man(9)-alpha-mannosidase) Length = 521 Score = 48.5 bits (114), Expect = 2e-05 Identities = 23/42 (54%), Positives = 30/42 (71%), Gaps = 1/42 (2%) Frame = -1 Query: 557 EKDDKMQSFFLAETLKYLYLLFSPP-SVVSFDEWVFNTEAHP 435 ++ DK +SF+ AETLKYLYLLF S++ + FNTEAHP Sbjct: 467 DQRDKTESFWFAETLKYLYLLFEDDFSILPLTNYTFNTEAHP 508
>MAN12_PENCI (P31723) Mannosyl-oligosaccharide alpha-1,2-mannosidase precursor| (EC 3.2.1.113) (Man(9)-alpha-mannosidase) Length = 511 Score = 43.1 bits (100), Expect = 8e-04 Identities = 25/73 (34%), Positives = 35/73 (47%), Gaps = 8/73 (10%) Frame = -1 Query: 620 AFEKNSRIASGYVGLRXVNS---GEKDDKMQSFFLAETLKYLYLLFSPPSVVSFDE---- 462 A R SG+ + VN G K D +SF AE +KY YL S + + Sbjct: 436 AINSTCRTDSGFAAVSDVNKANGGSKYDNQESFLFAEVMKYSYLAHSEDAAWQVQKGGKN 495 Query: 461 -WVFNTEAHPLRI 426 +V+NTEAHP+ + Sbjct: 496 TFVYNTEAHPISV 508
>Y1383_METJA (Q58778) Hypothetical protein MJ1383 precursor| Length = 256 Score = 29.6 bits (65), Expect = 9.2 Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 1/60 (1%) Frame = -1 Query: 662 IDPINNERREKVKXAFEKNSRIAS-GYVGLRXVNSGEKDDKMQSFFLAETLKYLYLLFSP 486 I P +E +K+K NSR+ G +GL EK+ ++ LAE L ++ +P Sbjct: 75 IPPEIDEALDKIKSYINYNSRVVGIGEIGLEKATKEEKEVFIKQLLLAEELNMPAVVHTP 134 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 92,807,650 Number of Sequences: 219361 Number of extensions: 1766472 Number of successful extensions: 3578 Number of sequences better than 10.0: 20 Number of HSP's better than 10.0 without gapping: 3496 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3566 length of database: 80,573,946 effective HSP length: 109 effective length of database: 56,663,597 effective search space used: 6969622431 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
